AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0901190

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0901190 MtrunA17_Chr1g0192761 94.118 102 6 0 15 116 358 459 1.45e-61 203
Msa0901190 MtrunA17_Chr4g0055151 41.667 96 53 2 30 124 315 408 2.67e-15 71.2
Msa0901190 MtrunA17_Chr5g0400081 39.175 97 55 3 30 124 310 404 1.04e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0901190 AT5G26860.1 80.392 102 20 0 15 116 401 502 5.77e-51 173
Msa0901190 AT3G05790.2 75.490 102 25 0 15 116 337 438 9.96e-47 161
Msa0901190 AT3G05790.1 75.490 102 25 0 15 116 348 449 1.22e-46 161
Msa0901190 AT3G05780.1 58.621 116 46 1 1 116 327 440 9.02e-40 141
Msa0901190 AT3G05775.1 53.409 88 39 2 10 97 11 96 9.87e-28 100
Msa0901190 AT5G47040.1 36.458 96 58 2 30 124 314 407 1.43e-12 63.9

Find 226 sgRNAs with CRISPR-Local

Find 840 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATTAAATGCATAAATATTA+TGG 0.124152 6_1:+97519379 Msa0901190:three_prime_UTR
GGCTTCTGCTTTACACAAAA+TGG 0.138296 6_1:+97520241 Msa0901190:three_prime_UTR
CTATTGGCTGTTCTGTATTT+AGG 0.170770 6_1:+97520326 Msa0901190:three_prime_UTR
TTGACATTGATGAGGTTATT+AGG 0.176901 6_1:+97520840 Msa0901190:three_prime_UTR
ACAGGGTAATAAATTGAATT+TGG 0.183276 6_1:-97520299 None:intergenic
ATATGACCAATAATGAATTT+TGG 0.185466 6_1:+97519540 Msa0901190:three_prime_UTR
GCCCTTATTGATTCTTCATC+TGG 0.217618 6_1:+97520173 Msa0901190:three_prime_UTR
TAATCATAATGTTGGGGATT+TGG 0.219662 6_1:-97519768 None:intergenic
GGAGTTTGATTAAAAGAGTT+TGG 0.228239 6_1:-97519454 None:intergenic
TGTTGGGGATTTGGAATATT+TGG 0.231225 6_1:-97519759 None:intergenic
ATTCTTGATGAAGACCATTA+TGG 0.236955 6_1:+97518207 Msa0901190:CDS
TATCAAATACAAGGGATTTC+AGG 0.243292 6_1:+97523477 Msa0901190:three_prime_UTR
GTTGAGTGATCATGTTGTTT+TGG 0.245364 6_1:-97520019 None:intergenic
CGCCATGTATTGTCTTTCTT+TGG 0.245550 6_1:-97524178 None:intergenic
TAATATCCAAAATTCATTAT+TGG 0.251066 6_1:-97519546 None:intergenic
TCATAGAAATCTTATTTCTA+TGG 0.256021 6_1:+97520661 Msa0901190:three_prime_UTR
ATGCATCTAATATATGTTAT+AGG 0.261609 6_1:-97519135 None:intergenic
TAAAATAGTGAAATAGAAAA+AGG 0.264279 6_1:-97519888 None:intergenic
AATTAATGTATTCTAGAGTT+TGG 0.264466 6_1:-97519342 None:intergenic
ACGGCTGCATCGACTATTTC+AGG 0.272026 6_1:-97523649 None:intergenic
AAATTTCCAACCCTATTCTT+AGG 0.276628 6_1:+97519700 Msa0901190:three_prime_UTR
CTTGTTGACTGCACTGCCTT+GGG 0.278819 6_1:+97517914 Msa0901190:CDS
TTGATTGAAATTAATGTGTT+AGG 0.279691 6_1:-97519011 None:intergenic
GGGTCAGTTGGAAGATTTCT+AGG 0.289970 6_1:-97520098 None:intergenic
ATTCACAACTATTCGTCAAT+AGG 0.296417 6_1:+97522561 Msa0901190:three_prime_UTR
ATGAAGGCAAAGGGTGTTAA+TGG 0.303488 6_1:+97520926 Msa0901190:three_prime_UTR
TTATTACCCTGTTATACTAT+TGG 0.314296 6_1:+97520310 Msa0901190:three_prime_UTR
TGGAAATTTCTGTACGCATT+TGG 0.315063 6_1:-97519686 None:intergenic
AATATTTGGTGTGAAGAAAA+AGG 0.315910 6_1:-97519745 None:intergenic
AGAACAGCCAATAGTATAAC+AGG 0.320104 6_1:-97520317 None:intergenic
TGACATTGATGAGGTTATTA+GGG 0.322063 6_1:+97520841 Msa0901190:three_prime_UTR
CAGGCAGCTGCGGTGAGCTT+TGG 0.328932 6_1:+97522646 Msa0901190:three_prime_UTR
GGAACGTAATAGCTACGTTT+AGG 0.330578 6_1:-97519796 None:intergenic
CAAAGCTCACCGCAGCTGCC+TGG 0.332403 6_1:-97522645 None:intergenic
TTGTGCCGATGAGGTATTCT+TGG 0.339517 6_1:-97518767 None:intergenic
GTTGAATAAGTGAGGTGTTC+GGG 0.341422 6_1:-97518514 None:intergenic
TTGCCAATGTTTCATGTGTA+TGG 0.342668 6_1:+97520755 Msa0901190:three_prime_UTR
ATTAAATGCATAAATATTAT+GGG 0.343088 6_1:+97519380 Msa0901190:three_prime_UTR
AATGTGCAGAATAGAAATTT+TGG 0.344789 6_1:-97524306 None:intergenic
AGCGCGTCTCAGACTATTCA+TGG 0.346889 6_1:-97509557 None:intergenic
ACCTGTATAAAATCAACGTT+CGG 0.347273 6_1:-97521034 None:intergenic
TAAAATATGAGTAACTCTTT+AGG 0.348968 6_1:+97519477 Msa0901190:three_prime_UTR
ACCCAGATGAAGAATCAATA+AGG 0.350199 6_1:-97520175 None:intergenic
GGTTATAAAGATTGAAACTT+TGG 0.354265 6_1:-97519914 None:intergenic
AAGGGTGAAATTGTCTTTGT+TGG 0.360994 6_1:-97519726 None:intergenic
GGGACTATAATCATAATGTT+GGG 0.361470 6_1:-97519775 None:intergenic
GCTGGTATATTGTATTCATC+TGG 0.361976 6_1:+97520605 Msa0901190:three_prime_UTR
AGTCCACCAATTTCATGTTA+TGG 0.362444 6_1:-97524206 None:intergenic
TTCACTTGAAATCTTTGATA+AGG 0.367611 6_1:+97524600 Msa0901190:three_prime_UTR
TTGGGTCATATTAACTTGTA+TGG 0.368545 6_1:-97519435 None:intergenic
AAAGCTCACCGCAGCTGCCT+GGG 0.370228 6_1:-97522644 None:intergenic
TTCCCCAGTTTCTTCATCTT+CGG 0.374121 6_1:-97523813 None:intergenic
TGATGTGAAGGAAAGAATAT+TGG 0.374667 6_1:+97518236 Msa0901190:CDS
CAGTGTTACCCGCAACTACT+TGG 0.376629 6_1:+97517890 Msa0901190:CDS
CGCTGATCGCGCTGTCCTTA+AGG 0.378206 6_1:+97509576 Msa0901190:CDS
CACTAATAACAGAATCATTC+AGG 0.378618 6_1:+97524697 Msa0901190:three_prime_UTR
ACTTGTTGACTGCACTGCCT+TGG 0.381035 6_1:+97517913 Msa0901190:CDS
AGCAATGCCTGAGCTGCTTT+CGG 0.384531 6_1:-97524105 None:intergenic
GGGTTACCATAACATGAAAT+TGG 0.385594 6_1:+97524200 Msa0901190:three_prime_UTR
AATTTAATTGGTGTGAGAAA+TGG 0.387416 6_1:-97518372 None:intergenic
GAACGTAATAGCTACGTTTA+GGG 0.387537 6_1:-97519795 None:intergenic
ATTTAATTGGTGTGAGAAAT+GGG 0.389468 6_1:-97518371 None:intergenic
CACTGCCTTGGGGTGAATAC+AGG 0.393770 6_1:+97517925 Msa0901190:CDS
GTGAGAAATGGGGTGCATTA+TGG 0.394728 6_1:-97518360 None:intergenic
GAGTTTGATTAAAAGAGTTT+GGG 0.395162 6_1:-97519453 None:intergenic
AGGGTGAAATTGTCTTTGTT+GGG 0.398587 6_1:-97519725 None:intergenic
AGTGCCGAAGATGAAGAAAC+TGG 0.401295 6_1:+97523809 Msa0901190:intron
TGCTGCGGGATTATTGTCGT+TGG 0.401502 6_1:+97520790 Msa0901190:three_prime_UTR
ACCTTCCGGACCTTCTTGTA+TGG 0.403187 6_1:-97524037 None:intergenic
TTCACAACTATTCGTCAATA+GGG 0.405454 6_1:+97522562 Msa0901190:three_prime_UTR
ATTAAACAAAACCAAGGAAA+AGG 0.409840 6_1:-97519605 None:intergenic
TGTTGTTCCACCGATGTTGT+CGG 0.411176 6_1:+97520895 Msa0901190:three_prime_UTR
TGTTGGCGAAATTCGTAAAC+AGG 0.412030 6_1:+97520382 Msa0901190:three_prime_UTR
AAGGAAACAATGTCAAGAAA+AGG 0.413052 6_1:-97520119 None:intergenic
CCCTTATTGATTCTTCATCT+GGG 0.414327 6_1:+97520174 Msa0901190:three_prime_UTR
CCTGTATAAAATCAACGTTC+GGG 0.416840 6_1:-97521033 None:intergenic
TCAGGATGGATATTTACATT+TGG 0.418131 6_1:+97523435 Msa0901190:three_prime_UTR
TTTGTTGGGATCCTAAGAAT+AGG 0.418373 6_1:-97519711 None:intergenic
GTCAAGAAACTAGAGCTATT+AGG 0.418468 6_1:+97520449 Msa0901190:three_prime_UTR
TCAAAGGGTAGTTATTAAAC+AGG 0.419883 6_1:+97520574 Msa0901190:three_prime_UTR
ACTCGCAAAGCTACAGCTAT+TGG 0.421155 6_1:+97517848 Msa0901190:CDS
AGTTGAATAAGTGAGGTGTT+CGG 0.421294 6_1:-97518515 None:intergenic
CTATTCGTCAATAGGGTTGT+TGG 0.424322 6_1:+97522569 Msa0901190:three_prime_UTR
GACAACATCGGTGGAACAAC+AGG 0.427365 6_1:-97520893 None:intergenic
TTGTTGGGATCCTAAGAATA+GGG 0.428757 6_1:-97519710 None:intergenic
TACGCATTTGGCTCTCAAGT+TGG 0.428976 6_1:-97519674 None:intergenic
TGTTTAATAACTACCCTTTG+AGG 0.430394 6_1:-97520572 None:intergenic
GGTTTATCGCTCTTTGCTGC+GGG 0.430597 6_1:+97520776 Msa0901190:three_prime_UTR
ACGCATTTGGCTCTCAAGTT+GGG 0.434343 6_1:-97519673 None:intergenic
TAACAACTTTGAGTAAGAAA+TGG 0.436153 6_1:-97520201 None:intergenic
AGGGACTATAATCATAATGT+TGG 0.443278 6_1:-97519776 None:intergenic
TCTAATATATGTTATAGGTT+AGG 0.443388 6_1:-97519130 None:intergenic
CAGAAAATGAGAAGGATTTG+AGG 0.445513 6_1:+97520498 Msa0901190:three_prime_UTR
GCTGCGGGATTATTGTCGTT+GGG 0.447735 6_1:+97520791 Msa0901190:three_prime_UTR
TCACATCAGTTAATCCATAA+TGG 0.447928 6_1:-97518221 None:intergenic
CTCAACACCCTCACCCTCAT+TGG 0.448612 6_1:+97520036 Msa0901190:three_prime_UTR
TGCGGTGAGCTTTGGTTGAG+AGG 0.454034 6_1:+97522654 Msa0901190:three_prime_UTR
GCTTCTGCTTTACACAAAAT+GGG 0.455667 6_1:+97520242 Msa0901190:three_prime_UTR
CAACAAGTCCAAGTAGTTGC+GGG 0.464343 6_1:-97517898 None:intergenic
CCCAGATGAAGAATCAATAA+GGG 0.467167 6_1:-97520174 None:intergenic
AATCAAATTTACCATAAAGA+AGG 0.470429 6_1:-97520547 None:intergenic
ATTGAAAAGTATGACACAAC+AGG 0.473687 6_1:-97524543 None:intergenic
AGACATCGTATATTATATAC+AGG 0.474844 6_1:+97518477 Msa0901190:three_prime_UTR
TTGCTTGACTTCTAAACTCT+AGG 0.476441 6_1:+97524123 Msa0901190:three_prime_UTR
AAGCTCACCGCAGCTGCCTG+GGG 0.478646 6_1:-97522643 None:intergenic
TAAATTTGATTTGCCTCAAA+GGG 0.485047 6_1:+97520559 Msa0901190:three_prime_UTR
GCATTTGTTGTCAAGAAGGT+TGG 0.486407 6_1:+97523845 Msa0901190:three_prime_UTR
GTAAATTTGATTTGCCTCAA+AGG 0.487083 6_1:+97520558 Msa0901190:three_prime_UTR
ACATAATCGACCACATGCTT+CGG 0.487322 6_1:-97523881 None:intergenic
TTGTATTCATCTGGGACTAC+AGG 0.489553 6_1:+97520614 Msa0901190:three_prime_UTR
ATTTCGCCAACACTACTAAG+AGG 0.489624 6_1:-97520371 None:intergenic
TATTGGAATTCATAGCTGTT+GGG 0.491082 6_1:+97518253 Msa0901190:CDS
ATGAGAACTTTCATGTTACT+CGG 0.494833 6_1:+97518175 Msa0901190:CDS
TGCTTATAATAGTGATTGGA+TGG 0.496305 6_1:+97519190 Msa0901190:three_prime_UTR
ATAACTGACTAAAGGTGTAC+GGG 0.498241 6_1:-97524409 None:intergenic
AACACAGCTTCTAGATCAGC+AGG 0.500308 6_1:-97523616 None:intergenic
GTACGGGGCAGAGTAATTGA+TGG 0.500362 6_1:-97524393 None:intergenic
TTCTTGACAACAAATGCGAC+TGG 0.501806 6_1:-97523839 None:intergenic
CGCAAAGCTACAGCTATTGG+AGG 0.501833 6_1:+97517851 Msa0901190:CDS
AGATCCTCCGAAAGCAGCTC+AGG 0.501984 6_1:+97524098 Msa0901190:three_prime_UTR
CACAAAATGGGTGTTTCACA+AGG 0.502968 6_1:+97520254 Msa0901190:three_prime_UTR
TTTCAGGTAAATTCAGGGAA+AGG 0.503118 6_1:+97517769 Msa0901190:intron
CGGAGACCTTGGTATCTTGT+CGG 0.503203 6_1:-97524068 None:intergenic
TTAAACAAAACCAAGGAAAA+GGG 0.505625 6_1:-97519604 None:intergenic
TGGTTTATCGCTCTTTGCTG+CGG 0.507976 6_1:+97520775 Msa0901190:three_prime_UTR
ATTTCTCTAGTGCATTTACA+AGG 0.509552 6_1:-97524442 None:intergenic
TGTCGGTGAAGAACACCTTC+CGG 0.510625 6_1:-97524051 None:intergenic
GTGGAAATGGGGATATGAAA+AGG 0.511114 6_1:-97519817 None:intergenic
TAAGTTGCAGAGTTTGAGAC+AGG 0.511530 6_1:+97520952 Msa0901190:three_prime_UTR
AGATACCAAGGTCTCCGATT+GGG 0.512248 6_1:+97524074 Msa0901190:three_prime_UTR
AGTCGCATTTGTTGTCAAGA+AGG 0.514135 6_1:+97523841 Msa0901190:three_prime_UTR
TTGCTCCATACAAGAAGGTC+CGG 0.515213 6_1:+97524032 Msa0901190:three_prime_UTR
GATGAAAGACTCTAATTGAA+AGG 0.515310 6_1:-97519294 None:intergenic
CGGAGGCAAAAGTGGTAGAC+TGG 0.515561 6_1:+97522601 Msa0901190:three_prime_UTR
ATCTTCCCAATCGGAGACCT+TGG 0.515866 6_1:-97524079 None:intergenic
GCGGTGAGCTTTGGTTGAGA+GGG 0.517348 6_1:+97522655 Msa0901190:three_prime_UTR
TTGAATCCTCTTAGTAGTGT+TGG 0.520706 6_1:+97520365 Msa0901190:three_prime_UTR
AGGAAACAATGTCAAGAAAA+GGG 0.521407 6_1:-97520118 None:intergenic
TTTGTCTTTATCATGTGTGC+GGG 0.521901 6_1:+97519630 Msa0901190:three_prime_UTR
ATATTGGAATTCATAGCTGT+TGG 0.524360 6_1:+97518252 Msa0901190:CDS
TATAACTGACTAAAGGTGTA+CGG 0.525204 6_1:-97524410 None:intergenic
TGGGATCCTAAGAATAGGGT+TGG 0.527873 6_1:-97519706 None:intergenic
AGCTTGTGAGCTACTCGCTC+CGG 0.529410 6_1:+97519055 Msa0901190:three_prime_UTR
CTGGTATATTGTATTCATCT+GGG 0.532782 6_1:+97520606 Msa0901190:three_prime_UTR
ATGTCAAGAAAAGGGTCAGT+TGG 0.533509 6_1:-97520110 None:intergenic
AAACCATACACATGAAACAT+TGG 0.533547 6_1:-97520758 None:intergenic
TCCAAACACGGAGGCAAAAG+TGG 0.534472 6_1:+97522593 Msa0901190:three_prime_UTR
GAAGCCATGGATTTGACTAA+AGG 0.537715 6_1:-97520224 None:intergenic
ATATCAACAATTGATAAAGA+TGG 0.537763 6_1:+97523379 Msa0901190:three_prime_UTR
AAAGATGGTTGGTTACATAC+AGG 0.537881 6_1:+97523394 Msa0901190:three_prime_UTR
GTTACCTTTAGTCAAATCCA+TGG 0.539728 6_1:+97520220 Msa0901190:three_prime_UTR
AAAGTGGTAGACTGGAACAA+TGG 0.541163 6_1:+97522609 Msa0901190:three_prime_UTR
CTCAGGATACTTGAATAATG+AGG 0.541417 6_1:+97523348 Msa0901190:intron
AATCAACGTTCGGGAAAGCA+TGG 0.541420 6_1:-97521024 None:intergenic
TTCATATACTTACGCTGTAA+CGG 0.543086 6_1:-97523668 None:intergenic
TGCTTGACTTCTAAACTCTA+GGG 0.545589 6_1:+97524124 Msa0901190:three_prime_UTR
ACACTACTAAGAGGATTCAA+TGG 0.545729 6_1:-97520362 None:intergenic
TTTCGGAGGATCTTCCCAAT+CGG 0.547034 6_1:-97524088 None:intergenic
CTCTTACTATAACTGACTAA+AGG 0.548149 6_1:-97524417 None:intergenic
GAAAGACATTATCAAATACA+AGG 0.550958 6_1:+97523468 Msa0901190:three_prime_UTR
GGTCGATTATGTTGCTGAGC+AGG 0.550976 6_1:+97523892 Msa0901190:three_prime_UTR
CAACAATTGATAAAGATGGT+TGG 0.560181 6_1:+97523383 Msa0901190:three_prime_UTR
TTTGTGTAAAGCAGAAGCCA+TGG 0.560434 6_1:-97520237 None:intergenic
ATAACTTGTAATACATGAGG+TGG 0.565089 6_1:-97517816 None:intergenic
TACCAAAGAAAGACAATACA+TGG 0.567298 6_1:+97524176 Msa0901190:three_prime_UTR
TTATGGATTAACTGATGTGA+AGG 0.567534 6_1:+97518224 Msa0901190:CDS
GGCATTGACAATGAAGGCAA+AGG 0.569984 6_1:+97520916 Msa0901190:three_prime_UTR
GCATTGACAATGAAGGCAAA+GGG 0.570042 6_1:+97520917 Msa0901190:three_prime_UTR
TCAACAAGTCCAAGTAGTTG+CGG 0.571396 6_1:-97517899 None:intergenic
ATTTAATGAATTTAAAACGT+GGG 0.575031 6_1:-97519097 None:intergenic
GAGGAAATTTGACATTGATG+AGG 0.576756 6_1:+97520832 Msa0901190:three_prime_UTR
TTGTTGACTGCACTGCCTTG+GGG 0.578541 6_1:+97517915 Msa0901190:CDS
AACAGCTAGAAACACACACT+TGG 0.579086 6_1:-97520732 None:intergenic
ATTGTCAATGCCGACAACAT+CGG 0.579863 6_1:-97520905 None:intergenic
GGACTATAATCATAATGTTG+GGG 0.580599 6_1:-97519774 None:intergenic
TTACCATAACATGAAATTGG+TGG 0.582902 6_1:+97524203 Msa0901190:three_prime_UTR
AAAGAAAGACAATACATGGC+GGG 0.585051 6_1:+97524180 Msa0901190:three_prime_UTR
TGCTGTGCCAGAAAATGAGA+AGG 0.586565 6_1:+97520490 Msa0901190:three_prime_UTR
AGGCTGTGGCTTGAGTGTGA+AGG 0.586939 6_1:-97519850 None:intergenic
ATAGCTGTTGGGAAATTGAG+AGG 0.587899 6_1:+97518264 Msa0901190:CDS
AAGATACCAAGGTCTCCGAT+TGG 0.589894 6_1:+97524073 Msa0901190:three_prime_UTR
GTGGTGTAAAATGTTGAATG+TGG 0.591694 6_1:-97519935 None:intergenic
AGTTTGAGACAGGTCTCTTG+CGG 0.592614 6_1:+97520962 Msa0901190:three_prime_UTR
GATGAATACCAATGAGGGTG+AGG 0.592922 6_1:-97520044 None:intergenic
GTTGTCGGCATTGACAATGA+AGG 0.595731 6_1:+97520910 Msa0901190:three_prime_UTR
TAGCTGTTGGGAAATTGAGA+GGG 0.598517 6_1:+97518265 Msa0901190:CDS
GTGCCGAAGATGAAGAAACT+GGG 0.600776 6_1:+97523810 Msa0901190:intron
AGGGCTAAAACCCCATCATG+AGG 0.601023 6_1:-97520155 None:intergenic
AATGCCTGAGCTGCTTTCGG+AGG 0.604997 6_1:-97524102 None:intergenic
AGCTCACCGCAGCTGCCTGG+GGG 0.606825 6_1:-97522642 None:intergenic
ATTAAACAGGAAGATACTGC+TGG 0.608838 6_1:+97520587 Msa0901190:three_prime_UTR
CGTAAACAGGTTCAAGAGTG+TGG 0.611754 6_1:+97520395 Msa0901190:three_prime_UTR
AGGGTTGTTGGCTCCAAACA+CGG 0.614077 6_1:+97522581 Msa0901190:three_prime_UTR
GGGACTACAGGTGTGAGCAA+AGG 0.615067 6_1:+97520626 Msa0901190:three_prime_UTR
AAAGACATTATCAAATACAA+GGG 0.615550 6_1:+97523469 Msa0901190:three_prime_UTR
GTCAATGCCGACAACATCGG+TGG 0.615987 6_1:-97520902 None:intergenic
GCTCTAAATTTGTGCCGATG+AGG 0.617021 6_1:-97518776 None:intergenic
AGAGGGCCTTCTATTATGAG+AGG 0.618979 6_1:+97522672 Msa0901190:three_prime_UTR
GCAGGTTGCTCCATACAAGA+AGG 0.622353 6_1:+97524027 Msa0901190:intron
TGAGAACTTTCATGTTACTC+GGG 0.622678 6_1:+97518176 Msa0901190:CDS
TCGACTGCAGTGGGAACACG+TGG 0.624008 6_1:+97522522 Msa0901190:three_prime_UTR
GCTCTACAGTCATTGTAATG+AGG 0.624765 6_1:+97520813 Msa0901190:three_prime_UTR
ATGATTAAAAGACTCAGTTG+TGG 0.636753 6_1:-97518650 None:intergenic
AAATTGAGAGGGACTTCACA+AGG 0.643864 6_1:+97518276 Msa0901190:CDS
TCTATAACTTGTAATACATG+AGG 0.645670 6_1:-97517819 None:intergenic
ATGACTGAGTCGACTGCAGT+GGG 0.649133 6_1:+97522513 Msa0901190:three_prime_UTR
TTTAATTGGTGTGAGAAATG+GGG 0.650895 6_1:-97518370 None:intergenic
TAACTTGTAATACATGAGGT+GGG 0.651379 6_1:-97517815 None:intergenic
GGGCTAAAACCCCATCATGA+GGG 0.653343 6_1:-97520154 None:intergenic
AATTTAATGAATTTAAAACG+TGG 0.657290 6_1:-97519098 None:intergenic
TCCATACAAGAAGGTCCGGA+AGG 0.659172 6_1:+97524036 Msa0901190:three_prime_UTR
AAAGGCCAAGAATACCTCAT+CGG 0.668814 6_1:+97518762 Msa0901190:three_prime_UTR
TGTACTTTCTCCGAAGCATG+TGG 0.668913 6_1:+97523871 Msa0901190:three_prime_UTR
AAAGCACTTAGAACAGACAA+AGG 0.669955 6_1:+97518744 Msa0901190:three_prime_UTR
CATCGTATATTATATACAGG+AGG 0.678692 6_1:+97518480 Msa0901190:three_prime_UTR
AATGACTGAGTCGACTGCAG+TGG 0.680151 6_1:+97522512 Msa0901190:three_prime_UTR
AAGAAACTAGAGCTATTAGG+TGG 0.680245 6_1:+97520452 Msa0901190:three_prime_UTR
ACAAACCTGTATTCACCCCA+AGG 0.685382 6_1:-97517930 None:intergenic
TGCCGAAGATGAAGAAACTG+GGG 0.685738 6_1:+97523811 Msa0901190:three_prime_UTR
ATGAATACCAATGAGGGTGA+GGG 0.691317 6_1:-97520043 None:intergenic
AAAACTGAGGTACAATACTG+AGG 0.714758 6_1:-97518324 None:intergenic
GAACAGCCAATAGTATAACA+GGG 0.716419 6_1:-97520316 None:intergenic
TCTTCACCGACAAGATACCA+AGG 0.749835 6_1:+97524062 Msa0901190:three_prime_UTR
CAAAGAAAGACAATACATGG+CGG 0.750110 6_1:+97524179 Msa0901190:three_prime_UTR
TAACTGACTAAAGGTGTACG+GGG 0.771403 6_1:-97524408 None:intergenic
GTTGTTGGCTCCAAACACGG+AGG 0.795141 6_1:+97522584 Msa0901190:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATATATATATATATAT+AGG + chr6_1:97511518-97511537 Msa0901190:intron 0.0%
!! TATATATATATATATATATA+GGG + chr6_1:97511519-97511538 Msa0901190:intron 0.0%
!! ATATATATATATATATATAT+GGG - chr6_1:97511518-97511537 None:intergenic 0.0%
!! TATATATATATATATATATA+TGG - chr6_1:97511519-97511538 None:intergenic 0.0%
!! ATAAAATAAGAAAATGAAAA+GGG - chr6_1:97510698-97510717 None:intergenic 10.0%
!! TATAAAATAAGAAAATGAAA+AGG - chr6_1:97510699-97510718 None:intergenic 10.0%
!! AATTGTTTAAAGATATAATT+GGG - chr6_1:97510928-97510947 None:intergenic 10.0%
!! AAATTGTTTAAAGATATAAT+TGG - chr6_1:97510929-97510948 None:intergenic 10.0%
!!! TTAGATTTTTTTTATATTGT+TGG + chr6_1:97511000-97511019 Msa0901190:intron 10.0%
!! ACAATATGATATTAATTATA+TGG - chr6_1:97511413-97511432 None:intergenic 10.0%
!!! ATATATATATATATGAGTTT+TGG - chr6_1:97511512-97511531 None:intergenic 10.0%
!!! ATTTTATTTTTTATAATGCT+TGG + chr6_1:97511937-97511956 Msa0901190:intron 10.0%
!! ATAAATTAATATTGTTAACA+TGG - chr6_1:97512866-97512885 None:intergenic 10.0%
!! ATTAATCTATATTTATACAT+AGG + chr6_1:97512982-97513001 Msa0901190:intron 10.0%
!! TAGTTTATAATAAAGATTAT+TGG + chr6_1:97513804-97513823 Msa0901190:intron 10.0%
!!! TTGTTTATATACAAAATTTT+AGG - chr6_1:97514643-97514662 None:intergenic 10.0%
!!! TTGAATTTTCTTTTTTTTTT+TGG - chr6_1:97514749-97514768 None:intergenic 10.0%
!!! CTTTAAAATGATTTTTTTTT+AGG - chr6_1:97518833-97518852 None:intergenic 10.0%
!! ATTAAATGCATAAATATTAT+GGG + chr6_1:97519380-97519399 Msa0901190:three_prime_UTR 10.0%
!! AATAAATACATTAATATTAG+AGG - chr6_1:97521738-97521757 None:intergenic 10.0%
!!! ATTAATGTATTTATTTTTAG+AGG + chr6_1:97521743-97521762 Msa0901190:intron 10.0%
!! GAAGAAAAAAATAAAATAAA+GGG - chr6_1:97524005-97524024 None:intergenic 10.0%
!! AGAAGAAAAAAATAAAATAA+AGG - chr6_1:97524006-97524025 None:intergenic 10.0%
!!! TTTATTTTATTTTTTTCTTC+TGG + chr6_1:97524005-97524024 Msa0901190:intron 10.0%
!!! TATTATTAAGGCTTTATATT+TGG - chr6_1:97509920-97509939 None:intergenic 15.0%
!!! AATTATTTTTAACCTACATT+GGG - chr6_1:97510621-97510640 None:intergenic 15.0%
!!! AAATTATTTTTAACCTACAT+TGG - chr6_1:97510622-97510641 None:intergenic 15.0%
!! TCTATAATAATGATAATTGT+TGG + chr6_1:97510951-97510970 Msa0901190:intron 15.0%
!!! AAAATAAAATTTGTGGATTT+TGG - chr6_1:97511927-97511946 None:intergenic 15.0%
!! ATATTGTAGTTAATATGTTT+GGG - chr6_1:97512568-97512587 None:intergenic 15.0%
!! TATTAAGACTCTTAAAAAAT+AGG + chr6_1:97512705-97512724 Msa0901190:intron 15.0%
!! ATTAAGACTCTTAAAAAATA+GGG + chr6_1:97512706-97512725 Msa0901190:intron 15.0%
!!! AATCATAGTTTTCTTATTTT+TGG - chr6_1:97512765-97512784 None:intergenic 15.0%
!!! TGATTATATTTCTAAACTTT+TGG + chr6_1:97512780-97512799 Msa0901190:intron 15.0%
!!! TAATATCTTGATTTTGTTTA+GGG - chr6_1:97513113-97513132 None:intergenic 15.0%
!!! TTAATATCTTGATTTTGTTT+AGG - chr6_1:97513114-97513133 None:intergenic 15.0%
!! TGATGAAATTCAATAAATAA+GGG - chr6_1:97513506-97513525 None:intergenic 15.0%
!! TTGATGAAATTCAATAAATA+AGG - chr6_1:97513507-97513526 None:intergenic 15.0%
!!! GAATAATTATCTAATGATTT+TGG - chr6_1:97514579-97514598 None:intergenic 15.0%
!!! TTTTTATTATGTTTTCTTGA+AGG - chr6_1:97514825-97514844 None:intergenic 15.0%
!! TAAATAAAGAAATTTAACGT+TGG - chr6_1:97515095-97515114 None:intergenic 15.0%
!!! CTTTTGATCAAATAATAATT+GGG - chr6_1:97515157-97515176 None:intergenic 15.0%
!!! ACTTTTGATCAAATAATAAT+TGG - chr6_1:97515158-97515177 None:intergenic 15.0%
!! TATAAATAAAATTGTTGTCT+TGG - chr6_1:97515195-97515214 None:intergenic 15.0%
!!! TTTAAATAGTTTTTATTAGG+AGG - chr6_1:97515574-97515593 None:intergenic 15.0%
!! ATATAAAATATGAAATGAGT+TGG + chr6_1:97515598-97515617 Msa0901190:intron 15.0%
!! TATAAAATATGAAATGAGTT+GGG + chr6_1:97515599-97515618 Msa0901190:intron 15.0%
!!! GAGTTTTATATATTTTTATG+TGG - chr6_1:97515756-97515775 None:intergenic 15.0%
!!! TTTTTATGTTTTATTGTTCT+AGG - chr6_1:97516356-97516375 None:intergenic 15.0%
!!! TTAACTTTACTTTTTATTTC+AGG + chr6_1:97517753-97517772 Msa0901190:intron 15.0%
!! ACAAGATAATTGTATAAAAA+TGG - chr6_1:97518408-97518427 None:intergenic 15.0%
!!! TGTATTTTTACTATGTTTTT+TGG + chr6_1:97518600-97518619 Msa0901190:three_prime_UTR 15.0%
!!! ATTTAATGAATTTAAAACGT+GGG - chr6_1:97519100-97519119 None:intergenic 15.0%
!!! AATTTAATGAATTTAAAACG+TGG - chr6_1:97519101-97519120 None:intergenic 15.0%
!!! AAGTTTGTTTTGTAAAATTA+AGG - chr6_1:97519234-97519253 None:intergenic 15.0%
!!! TTTACAAAACAAACTTTTAA+TGG + chr6_1:97519238-97519257 Msa0901190:three_prime_UTR 15.0%
!! AACTTAAAAAGTTAGATAAT+AGG - chr6_1:97519269-97519288 None:intergenic 15.0%
!!! TATTTTGATAAATAGATAAG+AGG + chr6_1:97519317-97519336 Msa0901190:three_prime_UTR 15.0%
!! GATTAAATGCATAAATATTA+TGG + chr6_1:97519379-97519398 Msa0901190:three_prime_UTR 15.0%
!! TAATATCCAAAATTCATTAT+TGG - chr6_1:97519549-97519568 None:intergenic 15.0%
!! AAAATAGTGAAATAGAAAAA+GGG - chr6_1:97519890-97519909 None:intergenic 15.0%
!! TAAAATAGTGAAATAGAAAA+AGG - chr6_1:97519891-97519910 None:intergenic 15.0%
!!! TTATTTTTCTTTGTTATTGT+TGG + chr6_1:97521139-97521158 Msa0901190:intron 15.0%
!! AGATATTAAAAAGTAAAACA+CGG + chr6_1:97522719-97522738 Msa0901190:intron 15.0%
!!! GTTTGATTAACAATTTTAAT+TGG - chr6_1:97523314-97523333 None:intergenic 15.0%
!!! ACTAACAAGAATATATTTTC+AGG + chr6_1:97509671-97509690 Msa0901190:intron 20.0%
!!! TTAATAATAGCTTTCAAGTT+GGG + chr6_1:97509931-97509950 Msa0901190:intron 20.0%
!!! AACATTTTAGATTTTAGTTC+CGG + chr6_1:97510104-97510123 Msa0901190:intron 20.0%
!!! ACAATAGTCAACTTTTTAAT+TGG - chr6_1:97510507-97510526 None:intergenic 20.0%
!! TTACTCCTCATAATATTAAT+TGG - chr6_1:97510531-97510550 None:intergenic 20.0%
!! GTTAAAAATAATTTACCACT+AGG + chr6_1:97510628-97510647 Msa0901190:intron 20.0%
!! TATATATACTATCGAAAAGA+CGG - chr6_1:97511196-97511215 None:intergenic 20.0%
!! TAAAAAATCTTGTGTATCAT+TGG + chr6_1:97511280-97511299 Msa0901190:intron 20.0%
!! AAACATATGAACTATAATCA+CGG - chr6_1:97511979-97511998 None:intergenic 20.0%
!!! AATTTTTGTCTTCTCTAATT+AGG + chr6_1:97512095-97512114 Msa0901190:intron 20.0%
!!! TTCAAGACTTTGTATTTTAT+TGG - chr6_1:97512366-97512385 None:intergenic 20.0%
!!! CATTTTGATTTCTTAAGAAA+AGG - chr6_1:97512434-97512453 None:intergenic 20.0%
!! GATATTGTAGTTAATATGTT+TGG - chr6_1:97512569-97512588 None:intergenic 20.0%
!! CTTGATATTATATTAGAGTA+TGG - chr6_1:97513081-97513100 None:intergenic 20.0%
!!! AATATCTTGATTTTGTTTAG+GGG - chr6_1:97513112-97513131 None:intergenic 20.0%
!! TTTCTAATATTCTAATGCTA+TGG + chr6_1:97513140-97513159 Msa0901190:intron 20.0%
!! AATTTCGTATGTTATCATTA+AGG + chr6_1:97513191-97513210 Msa0901190:intron 20.0%
!!! GATTTTTCTTTTTGTCAAAA+AGG + chr6_1:97513358-97513377 Msa0901190:intron 20.0%
!! AAAAATAATAAATGCTGCAT+TGG - chr6_1:97513468-97513487 None:intergenic 20.0%
!! TTCTTATTAACTACACATTT+CGG - chr6_1:97514263-97514282 None:intergenic 20.0%
!! TCAAACTATTCCATTAAAAT+TGG + chr6_1:97514308-97514327 Msa0901190:intron 20.0%
!! TACTAGGAAAAACAAAATTA+GGG - chr6_1:97514489-97514508 None:intergenic 20.0%
!!! TAAAGTTTTTTCATCATTCA+TGG + chr6_1:97514665-97514684 Msa0901190:intron 20.0%
!!! TCATGAAAACTTACTTATTT+TGG - chr6_1:97514933-97514952 None:intergenic 20.0%
!!! TAAGTAAGTTTTCATGAAAA+AGG + chr6_1:97514936-97514955 Msa0901190:intron 20.0%
!!! AAAAAGGTGTGTAATTATTA+TGG + chr6_1:97514952-97514971 Msa0901190:intron 20.0%
!!! AAAAGGTGTGTAATTATTAT+GGG + chr6_1:97514953-97514972 Msa0901190:intron 20.0%
!!! GACAAGTTTTTAAGTTTTTA+AGG + chr6_1:97515052-97515071 Msa0901190:intron 20.0%
!!! GTTTTTCCATGTTTATATAA+GGG - chr6_1:97515258-97515277 None:intergenic 20.0%
!!! TGTTTTTCCATGTTTATATA+AGG - chr6_1:97515259-97515278 None:intergenic 20.0%
!! GGAAAAACAATGAATTTAAT+TGG + chr6_1:97515270-97515289 Msa0901190:intron 20.0%
!!! CTTTTTTATTTAGTAGTCTT+TGG - chr6_1:97515416-97515435 None:intergenic 20.0%
!! CTATAATTAAGCTTAATTAG+TGG - chr6_1:97515778-97515797 None:intergenic 20.0%
!! CACTAATTAAGCTTAATTAT+AGG + chr6_1:97515776-97515795 Msa0901190:intron 20.0%
!! TTAATTATAGGAAGAATTTC+TGG + chr6_1:97515788-97515807 Msa0901190:intron 20.0%
!! CAATTAAATGTCTTGTAATA+AGG + chr6_1:97515867-97515886 Msa0901190:intron 20.0%
!! AAAATCTTCAAGCATAAATT+CGG + chr6_1:97516018-97516037 Msa0901190:intron 20.0%
!! TATTGTACCAAAACAATTAA+CGG + chr6_1:97516148-97516167 Msa0901190:intron 20.0%
!!! ATTTTATTGTTCATTACACT+TGG - chr6_1:97516493-97516512 None:intergenic 20.0%
!! CATAACTTAAATAATTGTCA+TGG + chr6_1:97516864-97516883 Msa0901190:intron 20.0%
!!! ATAATTTTTTTATGTCAGAG+TGG + chr6_1:97516946-97516965 Msa0901190:intron 20.0%
!!! TAATTTTTTTATGTCAGAGT+GGG + chr6_1:97516947-97516966 Msa0901190:intron 20.0%
!! AAAATAAATCAATGAAAGAG+AGG - chr6_1:97517403-97517422 None:intergenic 20.0%
!! AAATTGCTATAATAGAGATT+TGG + chr6_1:97517463-97517482 Msa0901190:intron 20.0%
!!! TTTTTATTTCAGGTAAATTC+AGG + chr6_1:97517763-97517782 Msa0901190:intron 20.0%
!!! TTTTATTTCAGGTAAATTCA+GGG + chr6_1:97517764-97517783 Msa0901190:intron 20.0%
!! GGAAAAACAATGAATTTAAT+TGG - chr6_1:97515270-97515289 None:intergenic 20.0%
!!! TTTTTTAAGTTGAATAAGTG+AGG - chr6_1:97518525-97518544 None:intergenic 20.0%
!!! ACTACAAGTCAAATTTTTTT+TGG - chr6_1:97518577-97518596 None:intergenic 20.0%
!!! ATTTTTACTATGTTTTTTGG+AGG + chr6_1:97518603-97518622 Msa0901190:three_prime_UTR 20.0%
!!! TTTTTACTATGTTTTTTGGA+GGG + chr6_1:97518604-97518623 Msa0901190:three_prime_UTR 20.0%
!! TTGATTGAAATTAATGTGTT+AGG - chr6_1:97519014-97519033 None:intergenic 20.0%
!!! TTTTTACTTATATTAGTCAC+CGG - chr6_1:97519077-97519096 None:intergenic 20.0%
!! TCTAATATATGTTATAGGTT+AGG - chr6_1:97519133-97519152 None:intergenic 20.0%
!! ATGCATCTAATATATGTTAT+AGG - chr6_1:97519138-97519157 None:intergenic 20.0%
!!! AATTAATGTATTCTAGAGTT+TGG - chr6_1:97519345-97519364 None:intergenic 20.0%
!!! TAAAGAGTTACTCATATTTT+AGG - chr6_1:97519478-97519497 None:intergenic 20.0%
!! TAAAATATGAGTAACTCTTT+AGG + chr6_1:97519477-97519496 Msa0901190:three_prime_UTR 20.0%
!!! TATTTTTGTGTGTGAAAAAA+AGG - chr6_1:97519523-97519542 None:intergenic 20.0%
!!! ATATGACCAATAATGAATTT+TGG + chr6_1:97519540-97519559 Msa0901190:three_prime_UTR 20.0%
!! CAAAAAATTAAACAAAACCA+AGG - chr6_1:97519614-97519633 None:intergenic 20.0%
!!! AGTTTTTTTAACCTTCTTTA+TGG + chr6_1:97520536-97520555 Msa0901190:three_prime_UTR 20.0%
!! AATCAAATTTACCATAAAGA+AGG - chr6_1:97520550-97520569 None:intergenic 20.0%
!!! TCATAGAAATCTTATTTCTA+TGG + chr6_1:97520661-97520680 Msa0901190:three_prime_UTR 20.0%
!! ATTAAGACTATTCTATTCAA+AGG - chr6_1:97521066-97521085 None:intergenic 20.0%
!!! TTTTTTTTTTTACTCGAGTT+CGG - chr6_1:97522170-97522189 None:intergenic 20.0%
!! GATATTAAAAAGTAAAACAC+GGG + chr6_1:97522720-97522739 Msa0901190:intron 20.0%
!! TATAGAGCAAATATAGTAAA+GGG - chr6_1:97522875-97522894 None:intergenic 20.0%
!! ATATAGAGCAAATATAGTAA+AGG - chr6_1:97522876-97522895 None:intergenic 20.0%
!!! TCATTAACATTTTACTGATA+AGG - chr6_1:97523109-97523128 None:intergenic 20.0%
!! ATATCAACAATTGATAAAGA+TGG + chr6_1:97523379-97523398 Msa0901190:three_prime_UTR 20.0%
!!! AGATATTGTTTATTTTGATC+AGG + chr6_1:97523417-97523436 Msa0901190:three_prime_UTR 20.0%
!! AAAGACATTATCAAATACAA+GGG + chr6_1:97523469-97523488 Msa0901190:three_prime_UTR 20.0%
!!! TTAATACCTTATTTTTCTTC+AGG + chr6_1:97524636-97524655 Msa0901190:three_prime_UTR 20.0%
!!! ATCATTTGTTTTGATTACTT+GGG - chr6_1:97524673-97524692 None:intergenic 20.0%
!!! TATCATTTGTTTTGATTACT+TGG - chr6_1:97524674-97524693 None:intergenic 20.0%
! AATTACGTGAAAAATCCTTA+AGG - chr6_1:97509594-97509613 None:intergenic 25.0%
!! TGAGACTCTGAAAAATTAAA+AGG + chr6_1:97509718-97509737 Msa0901190:intron 25.0%
!! ATGTGAGTTGAAGAATAAAA+AGG + chr6_1:97509746-97509765 Msa0901190:intron 25.0%
!! TGTGAGTTGAAGAATAAAAA+GGG + chr6_1:97509747-97509766 Msa0901190:intron 25.0%
! CAACTTGAAAGCTATTATTA+AGG - chr6_1:97509932-97509951 None:intergenic 25.0%
!! CTTAATAATAGCTTTCAAGT+TGG + chr6_1:97509930-97509949 Msa0901190:intron 25.0%
!!! AAAATGTTTTAGCGTGTTTT+TGG - chr6_1:97510092-97510111 None:intergenic 25.0%
! ACACATGACATAATTTAGTA+TGG + chr6_1:97510189-97510208 Msa0901190:intron 25.0%
! CACATGACATAATTTAGTAT+GGG + chr6_1:97510190-97510209 Msa0901190:intron 25.0%
! TATGTATGTAAGGTGAAAAT+GGG - chr6_1:97510218-97510237 None:intergenic 25.0%
! TTATGTATGTAAGGTGAAAA+TGG - chr6_1:97510219-97510238 None:intergenic 25.0%
! GGTCTATATGTAAAATATTG+GGG - chr6_1:97510358-97510377 None:intergenic 25.0%
! GGGTCTATATGTAAAATATT+GGG - chr6_1:97510359-97510378 None:intergenic 25.0%
! AGTGTCAGTTATATTAAATG+AGG - chr6_1:97510395-97510414 None:intergenic 25.0%
! TTGTGCCAATTAATATTATG+AGG + chr6_1:97510523-97510542 Msa0901190:intron 25.0%
!!! TTATGCCAAAATGGATTAAA+GGG + chr6_1:97510579-97510598 Msa0901190:intron 25.0%
! ATATTCATAATCTCTTGAGA+TGG - chr6_1:97510749-97510768 None:intergenic 25.0%
!! GAAAATATGAGATTTTGTGT+TGG + chr6_1:97510890-97510909 Msa0901190:intron 25.0%
!!! ATTGTTGGTGTCATTTAAAT+AGG + chr6_1:97511015-97511034 Msa0901190:intron 25.0%
! GTCATTTAAATAGGTAAACT+TGG + chr6_1:97511024-97511043 Msa0901190:intron 25.0%
! CAACGTTTGAAAATTATGAA+CGG - chr6_1:97511135-97511154 None:intergenic 25.0%
! ATATATACTATCGAAAAGAC+GGG - chr6_1:97511195-97511214 None:intergenic 25.0%
!!! ACAAGATTTTTTATGTACAG+TGG - chr6_1:97511273-97511292 None:intergenic 25.0%
! ACACCTTAATAAAAACTAGT+GGG - chr6_1:97511570-97511589 None:intergenic 25.0%
! AAGTTGTTAAATACACCTTA+AGG + chr6_1:97511613-97511632 Msa0901190:intron 25.0%
!! ACACCTTCTAAAAAATAAGT+GGG + chr6_1:97511652-97511671 Msa0901190:intron 25.0%
!! ACACCTTCTAAAAAATAAGT+GGG - chr6_1:97511652-97511671 None:intergenic 25.0%
! AAGTAGTTAAATACACCTTA+AGG + chr6_1:97511759-97511778 Msa0901190:intron 25.0%
!! TAAAATTTGTGGATTTTGGA+GGG - chr6_1:97511923-97511942 None:intergenic 25.0%
!! ATAAAATTTGTGGATTTTGG+AGG - chr6_1:97511924-97511943 None:intergenic 25.0%
! AACATATGAACTATAATCAC+GGG - chr6_1:97511978-97511997 None:intergenic 25.0%
!! CAAATACAGTTTTCAAAGAT+GGG - chr6_1:97512155-97512174 None:intergenic 25.0%
! GATGGTTAAAAACCTTTAAA+CGG - chr6_1:97512262-97512281 None:intergenic 25.0%
!! AAAGGTTTTTAACCATCTTT+TGG + chr6_1:97512265-97512284 Msa0901190:intron 25.0%
! AATAATGACAACTTGATACA+AGG + chr6_1:97512387-97512406 Msa0901190:intron 25.0%
! ATAATGACAACTTGATACAA+GGG + chr6_1:97512388-97512407 Msa0901190:intron 25.0%
!! GAATCTCTATTGTAACTTTT+CGG - chr6_1:97512517-97512536 None:intergenic 25.0%
! TTAAATTGGATAGTCAAAAG+AGG - chr6_1:97512637-97512656 None:intergenic 25.0%
!!! TCTTTTGACTATCCAATTTA+AGG + chr6_1:97512636-97512655 Msa0901190:intron 25.0%
! TAATCTGACATGAAAATGAA+AGG + chr6_1:97512677-97512696 Msa0901190:intron 25.0%
! AGTGATGAAATAATTTGAGA+AGG + chr6_1:97512820-97512839 Msa0901190:intron 25.0%
! ATAATAGAATGAACATGAAG+AGG + chr6_1:97512898-97512917 Msa0901190:intron 25.0%
! ATAACATACGAAATTCTACT+TGG - chr6_1:97513186-97513205 None:intergenic 25.0%
! AGAAATATTTCAATGTGAAG+AGG + chr6_1:97513227-97513246 Msa0901190:intron 25.0%
!! TTTTCTTTTTGTCAAAAAGG+TGG + chr6_1:97513361-97513380 Msa0901190:intron 25.0%
!!! ATTAGTTGTGTTGATTTCAA+TGG - chr6_1:97513590-97513609 None:intergenic 25.0%
! CTCTAAATTATAGTCGTTTA+AGG - chr6_1:97513638-97513657 None:intergenic 25.0%
! AAACGACTATAATTTAGAGA+CGG + chr6_1:97513639-97513658 Msa0901190:intron 25.0%
! TTTGTTTATACTATTACCGA+CGG - chr6_1:97513747-97513766 None:intergenic 25.0%
! GTCAAAATATCATTTCTCTT+TGG - chr6_1:97513875-97513894 None:intergenic 25.0%
! TACAAATGAAAATGTTGCAT+TGG - chr6_1:97514135-97514154 None:intergenic 25.0%
!!! TTTTGTTTTTTTAGTAGTGC+AGG - chr6_1:97514351-97514370 None:intergenic 25.0%
! TTAGTGAAGATAATTTAGTG+AGG + chr6_1:97514372-97514391 Msa0901190:intron 25.0%
! TAGTGAAGATAATTTAGTGA+GGG + chr6_1:97514373-97514392 Msa0901190:intron 25.0%
! CTACTAGGAAAAACAAAATT+AGG - chr6_1:97514490-97514509 None:intergenic 25.0%
! TTAGAGAAAAACACACATTA+AGG + chr6_1:97514520-97514539 Msa0901190:intron 25.0%
! CAAGCAAAATTGTTCAAAAA+AGG + chr6_1:97514546-97514565 Msa0901190:intron 25.0%
! TTCTATCCAACTACAAAATT+TGG + chr6_1:97514596-97514615 Msa0901190:intron 25.0%
! AATTTAATTGGTGTGAGAAA+TGG + chr6_1:97515282-97515301 Msa0901190:intron 25.0%
! ATTTAATTGGTGTGAGAAAT+GGG + chr6_1:97515283-97515302 Msa0901190:intron 25.0%
! GGAATGTACATAAATAATGT+TGG - chr6_1:97515527-97515546 None:intergenic 25.0%
!!! CTCATCATGCAATATTTTTT+TGG + chr6_1:97515694-97515713 Msa0901190:intron 25.0%
!!! GTAATAAGGTCATTTTCATA+TGG + chr6_1:97515881-97515900 Msa0901190:intron 25.0%
!! GAATTTATGCTTGAAGATTT+TGG - chr6_1:97516019-97516038 None:intergenic 25.0%
! TGTAAGAGAAAAATTATCGT+TGG - chr6_1:97516428-97516447 None:intergenic 25.0%
!! CAATATTGATGATACTAATG+AGG - chr6_1:97516750-97516769 None:intergenic 25.0%
!! TGAGATGATCTTTTTATGTT+TGG + chr6_1:97516915-97516934 Msa0901190:intron 25.0%
! ACCTTTGAATGAAATTTCAT+TGG + chr6_1:97517009-97517028 Msa0901190:intron 25.0%
! CCTTTGAATGAAATTTCATT+GGG + chr6_1:97517010-97517029 Msa0901190:intron 25.0%
! TTTACTTCCTTTCATGAAAT+TGG + chr6_1:97517420-97517439 Msa0901190:intron 25.0%
! TTACTTCCTTTCATGAAATT+GGG + chr6_1:97517421-97517440 Msa0901190:intron 25.0%
!! TCTATAACTTGTAATACATG+AGG - chr6_1:97517822-97517841 None:intergenic 25.0%
!! TGCATAAGCATAATTTTCAT+AGG + chr6_1:97518069-97518088 Msa0901190:intron 25.0%
! ATTTAATTGGTGTGAGAAAT+GGG - chr6_1:97515283-97515302 None:intergenic 25.0%
! AATTTAATTGGTGTGAGAAA+TGG - chr6_1:97515282-97515301 None:intergenic 25.0%
! AGACATCGTATATTATATAC+AGG + chr6_1:97518477-97518496 Msa0901190:three_prime_UTR 25.0%
!!! TTTTTGGTAAAATAGTCTAG+TGG - chr6_1:97518561-97518580 None:intergenic 25.0%
!!! TTTTACTATGTTTTTTGGAG+GGG + chr6_1:97518605-97518624 Msa0901190:three_prime_UTR 25.0%
!! CTTTTGCTTATAATAGTGAT+TGG + chr6_1:97519186-97519205 Msa0901190:three_prime_UTR 25.0%
! GAGTTTGATTAAAAGAGTTT+GGG - chr6_1:97519456-97519475 None:intergenic 25.0%
! TTAAACAAAACCAAGGAAAA+GGG - chr6_1:97519607-97519626 None:intergenic 25.0%
! ATTAAACAAAACCAAGGAAA+AGG - chr6_1:97519608-97519627 None:intergenic 25.0%
!!! ATATTTGGTGTGAAGAAAAA+GGG - chr6_1:97519747-97519766 None:intergenic 25.0%
!!! AATATTTGGTGTGAAGAAAA+AGG - chr6_1:97519748-97519767 None:intergenic 25.0%
! GGTTATAAAGATTGAAACTT+TGG - chr6_1:97519917-97519936 None:intergenic 25.0%
!! TTGATTTTCAGAAAAGAGAA+CGG - chr6_1:97519965-97519984 None:intergenic 25.0%
!!! TTCTCTTTTCTGAAAATCAA+TGG + chr6_1:97519965-97519984 Msa0901190:three_prime_UTR 25.0%
!! TTTTTGATGAATACCAATGA+GGG - chr6_1:97520052-97520071 None:intergenic 25.0%
! TAACAACTTTGAGTAAGAAA+TGG - chr6_1:97520204-97520223 None:intergenic 25.0%
! ACAGGGTAATAAATTGAATT+TGG - chr6_1:97520302-97520321 None:intergenic 25.0%
! TTATTACCCTGTTATACTAT+TGG + chr6_1:97520310-97520329 Msa0901190:three_prime_UTR 25.0%
!!! TAAATTTGATTTGCCTCAAA+GGG + chr6_1:97520559-97520578 Msa0901190:three_prime_UTR 25.0%
! TTTAATAGCAACTGCTATAT+AGG + chr6_1:97521220-97521239 Msa0901190:intron 25.0%
! TTAATAGCAACTGCTATATA+GGG + chr6_1:97521221-97521240 Msa0901190:intron 25.0%
! GAACTCGAGTAAAAAAAAAA+AGG + chr6_1:97522169-97522188 Msa0901190:intron 25.0%
!!! TATGAAAATAGCTTTGACTA+GGG - chr6_1:97522290-97522309 None:intergenic 25.0%
!!! TTATGAAAATAGCTTTGACT+AGG - chr6_1:97522291-97522310 None:intergenic 25.0%
!!! TTATGATCTAGAATTTGTTG+TGG - chr6_1:97522407-97522426 None:intergenic 25.0%
!!! TGTAAGATTGTTTCTTTTCA+GGG + chr6_1:97522483-97522502 Msa0901190:intron 25.0%
!! TTTTTACCTCTCATAATAGA+AGG - chr6_1:97522681-97522700 None:intergenic 25.0%
! ATAGAGCAAATATAGTAAAG+GGG - chr6_1:97522874-97522893 None:intergenic 25.0%
!!! ATTTGTTATCGCTTAACTAA+AGG + chr6_1:97522894-97522913 Msa0901190:intron 25.0%
! AACTAACATGATATTTCTCA+AGG - chr6_1:97522927-97522946 None:intergenic 25.0%
! AAACTGAAGTAAATTTCTCT+TGG + chr6_1:97523196-97523215 Msa0901190:intron 25.0%
!!! ATTGTTTATTTTGATCAGGA+TGG + chr6_1:97523421-97523440 Msa0901190:three_prime_UTR 25.0%
! GAAAGACATTATCAAATACA+AGG + chr6_1:97523468-97523487 Msa0901190:three_prime_UTR 25.0%
! TTATAATCAAATGTCCAAAG+AGG - chr6_1:97523760-97523779 None:intergenic 25.0%
! GAAAAATGATGTAACATTTG+AGG - chr6_1:97523783-97523802 None:intergenic 25.0%
!!! TTTTATTTTTTTCTTCTGGC+AGG + chr6_1:97524009-97524028 Msa0901190:intron 25.0%
!! TCATGAGTACATCTTTTTAA+AGG + chr6_1:97524251-97524270 Msa0901190:three_prime_UTR 25.0%
!! AATGTGCAGAATAGAAATTT+TGG - chr6_1:97524309-97524328 None:intergenic 25.0%
!! AATTCAGTGGTTAAGATTTT+TGG + chr6_1:97524563-97524582 Msa0901190:three_prime_UTR 25.0%
! TTCACTTGAAATCTTTGATA+AGG + chr6_1:97524600-97524619 Msa0901190:three_prime_UTR 25.0%
AAAAGGGTCTATTAAATCCT+GGG - chr6_1:97509629-97509648 None:intergenic 30.0%
!! TCCTCGATTTTAATCGAAAA+GGG - chr6_1:97509645-97509664 None:intergenic 30.0%
!! ATCCTCGATTTTAATCGAAA+AGG - chr6_1:97509646-97509665 None:intergenic 30.0%
! GTGAGTTGAAGAATAAAAAG+GGG + chr6_1:97509748-97509767 Msa0901190:intron 30.0%
! TGACAAAGTCAATTTTTGAC+TGG - chr6_1:97509895-97509914 None:intergenic 30.0%
! AACTTTGTTTACTGAGTCAA+AGG - chr6_1:97509981-97510000 None:intergenic 30.0%
AATGACCTTGTTCTTAAATG+AGG + chr6_1:97510163-97510182 Msa0901190:intron 30.0%
ATGACCTTGTTCTTAAATGA+GGG + chr6_1:97510164-97510183 Msa0901190:intron 30.0%
TTCACCTTACATACATAAAC+AGG + chr6_1:97510221-97510240 Msa0901190:intron 30.0%
TCACCTTACATACATAAACA+GGG + chr6_1:97510222-97510241 Msa0901190:intron 30.0%
GTGCAAACAAATAAGGATAT+TGG - chr6_1:97510307-97510326 None:intergenic 30.0%
GGGGTCTATATGTAAAATAT+TGG - chr6_1:97510360-97510379 None:intergenic 30.0%
ACAGAACAGTAAAGAAAAAG+AGG - chr6_1:97510422-97510441 None:intergenic 30.0%
!! CTTATGCCAAAATGGATTAA+AGG + chr6_1:97510578-97510597 Msa0901190:intron 30.0%
!! TATGCCAAAATGGATTAAAG+GGG + chr6_1:97510580-97510599 Msa0901190:intron 30.0%
TAACAATTCATATAGCCTAG+TGG - chr6_1:97510646-97510665 None:intergenic 30.0%
TTGAGATGGAAGAAAAAAGA+AGG - chr6_1:97510735-97510754 None:intergenic 30.0%
! ATAGGTAAACTTGGTTAGTT+TGG + chr6_1:97511033-97511052 Msa0901190:intron 30.0%
AATCCAATTCACTAAAACAC+AGG - chr6_1:97511333-97511352 None:intergenic 30.0%
TTTAGTGAATTGGATTCTCA+AGG + chr6_1:97511337-97511356 Msa0901190:intron 30.0%
TTAGTGAATTGGATTCTCAA+GGG + chr6_1:97511338-97511357 Msa0901190:intron 30.0%
! TATATATATAGGGGTTTGCT+AGG + chr6_1:97511539-97511558 Msa0901190:intron 30.0%
!!! ACACCCACTAGTTTTTATTA+AGG + chr6_1:97511564-97511583 Msa0901190:intron 30.0%
CACACCTTAATAAAAACTAG+TGG - chr6_1:97511571-97511590 None:intergenic 30.0%
! TTTTAGCAACATTCACCTTA+AGG - chr6_1:97511631-97511650 None:intergenic 30.0%
! CACACCTTCTAAAAAATAAG+TGG + chr6_1:97511651-97511670 Msa0901190:intron 30.0%
!!! ACACCCACTTATTTTTTAGA+AGG - chr6_1:97511711-97511730 None:intergenic 30.0%
!!! ACACCCACTTATTTTTTAGA+AGG + chr6_1:97511711-97511730 Msa0901190:intron 30.0%
! CACACCTTCTAAAAAATAAG+TGG - chr6_1:97511651-97511670 None:intergenic 30.0%
!! AAAATTTGTGGATTTTGGAG+GGG - chr6_1:97511922-97511941 None:intergenic 30.0%
! CCAAATACAGTTTTCAAAGA+TGG - chr6_1:97512156-97512175 None:intergenic 30.0%
! CCATCTTTGAAAACTGTATT+TGG + chr6_1:97512153-97512172 Msa0901190:intron 30.0%
TTTGAAAACTGTATTTGGCT+CGG + chr6_1:97512158-97512177 Msa0901190:intron 30.0%
TTATTGTTGACATATACCAC+TGG - chr6_1:97512296-97512315 None:intergenic 30.0%
TTTGACTATCCAATTTAAGG+AGG + chr6_1:97512639-97512658 Msa0901190:intron 30.0%
TTAACATGGTATGTAGAGAT+TGG - chr6_1:97512852-97512871 None:intergenic 30.0%
! GTATGGAGTATCTCTTAATA+AGG - chr6_1:97513064-97513083 None:intergenic 30.0%
ATATTCTAATGCTATGGTCA+AGG + chr6_1:97513146-97513165 Msa0901190:intron 30.0%
TCGTATGTTATCATTAAGGT+TGG + chr6_1:97513195-97513214 Msa0901190:intron 30.0%
! ATCATTAAGGTTGGTTATAG+TGG + chr6_1:97513204-97513223 Msa0901190:intron 30.0%
GAAAACCACACAGTTTATAT+AGG - chr6_1:97513283-97513302 None:intergenic 30.0%
CGAAAAAGATAAAGAGAGAA+AGG - chr6_1:97513309-97513328 None:intergenic 30.0%
!! TCTCTCTTTATCTTTTTCGT+CGG + chr6_1:97513310-97513329 Msa0901190:intron 30.0%
AAGAGACAATTATTGTGAGA+CGG - chr6_1:97513402-97513421 None:intergenic 30.0%
AAAACAATGGAGAGAGAAAA+AGG - chr6_1:97513956-97513975 None:intergenic 30.0%
TTCTCATTGGTCAAAAACAA+TGG - chr6_1:97513969-97513988 None:intergenic 30.0%
!! TTGTTTTTCTCACTTCTCAT+TGG - chr6_1:97513982-97514001 None:intergenic 30.0%
TCAACAAAGTTGTTATCAAG+TGG + chr6_1:97514007-97514026 Msa0901190:intron 30.0%
!! AAAGAGTACCTTAAAGACTT+TGG - chr6_1:97514167-97514186 None:intergenic 30.0%
TAAATCTCTCACAAATTCCT+TGG - chr6_1:97514442-97514461 None:intergenic 30.0%
AGGAAAAACAAAATTAGGGA+AGG - chr6_1:97514485-97514504 None:intergenic 30.0%
! TCTAAAATATCAGCACTACT+AGG - chr6_1:97514505-97514524 None:intergenic 30.0%
ATGATTAAAAGACTCACTAG+TGG + chr6_1:97514775-97514794 Msa0901190:intron 30.0%
TTTAATTGGTGTGAGAAATG+GGG + chr6_1:97515284-97515303 Msa0901190:intron 30.0%
GCATCGTCAAAATTCATTAT+TGG - chr6_1:97515480-97515499 None:intergenic 30.0%
CAGTAGCAAGTTTCTAATTA+TGG - chr6_1:97516179-97516198 None:intergenic 30.0%
TTGGATTACATGTTTGCAAT+AGG - chr6_1:97516409-97516428 None:intergenic 30.0%
TCATTACACTTGGATAATGA+GGG - chr6_1:97516483-97516502 None:intergenic 30.0%
TTCATTACACTTGGATAATG+AGG - chr6_1:97516484-97516503 None:intergenic 30.0%
AAAATCAACAAAAGCCTAGA+TGG + chr6_1:97516508-97516527 Msa0901190:intron 30.0%
! GTCAATAGGTCAAATACTTT+TGG - chr6_1:97516543-97516562 None:intergenic 30.0%
GAATTAAGAATATGTTACGC+AGG + chr6_1:97516772-97516791 Msa0901190:intron 30.0%
TATGTCTCTATCAGAACAAA+TGG - chr6_1:97516848-97516867 None:intergenic 30.0%
CCCAATGAAATTTCATTCAA+AGG - chr6_1:97517013-97517032 None:intergenic 30.0%
AAATCACCCAATTTCATGAA+AGG - chr6_1:97517430-97517449 None:intergenic 30.0%
! AGTAGACAGTAGTAATGTTT+TGG + chr6_1:97517501-97517520 Msa0901190:intron 30.0%
! GTAGACAGTAGTAATGTTTT+GGG + chr6_1:97517502-97517521 Msa0901190:intron 30.0%
! TAGACAGTAGTAATGTTTTG+GGG + chr6_1:97517503-97517522 Msa0901190:intron 30.0%
TCATTAGATGTACAATGTTG+AGG - chr6_1:97517629-97517648 None:intergenic 30.0%
CAACATTGTACATCTAATGA+TGG + chr6_1:97517629-97517648 Msa0901190:intron 30.0%
!! TTGTACATCTAATGATGGAT+TGG + chr6_1:97517634-97517653 Msa0901190:intron 30.0%
TTGTTTGTGCTTTAGTCTAT+AGG + chr6_1:97517684-97517703 Msa0901190:intron 30.0%
! CTTTAGTCTATAGGTTTTTC+TGG + chr6_1:97517693-97517712 Msa0901190:intron 30.0%
! TAACTTGTAATACATGAGGT+GGG - chr6_1:97517818-97517837 None:intergenic 30.0%
! ATAACTTGTAATACATGAGG+TGG - chr6_1:97517819-97517838 None:intergenic 30.0%
!!! ATTTTAGTTGTCAACTTCTG+AGG - chr6_1:97518050-97518069 None:intergenic 30.0%
AATTAACAGATTCAGACTCA+TGG - chr6_1:97518142-97518161 None:intergenic 30.0%
ATGAGAACTTTCATGTTACT+CGG + chr6_1:97518175-97518194 Msa0901190:CDS 30.0%
ATTCTTGATGAAGACCATTA+TGG + chr6_1:97518207-97518226 Msa0901190:CDS 30.0%
TCACATCAGTTAATCCATAA+TGG - chr6_1:97518224-97518243 None:intergenic 30.0%
! TTATGGATTAACTGATGTGA+AGG + chr6_1:97518224-97518243 Msa0901190:CDS 30.0%
TGATGTGAAGGAAAGAATAT+TGG + chr6_1:97518236-97518255 Msa0901190:CDS 30.0%
ATATTGGAATTCATAGCTGT+TGG + chr6_1:97518252-97518271 Msa0901190:CDS 30.0%
TATTGGAATTCATAGCTGTT+GGG + chr6_1:97518253-97518272 Msa0901190:CDS 30.0%
TTTAATTGGTGTGAGAAATG+GGG - chr6_1:97515284-97515303 None:intergenic 30.0%
CATCGTATATTATATACAGG+AGG + chr6_1:97518480-97518499 Msa0901190:three_prime_UTR 30.0%
!! GGGTATTTTTACTATGTTGA+CGG + chr6_1:97518625-97518644 Msa0901190:three_prime_UTR 30.0%
ATGATTAAAAGACTCAGTTG+TGG - chr6_1:97518653-97518672 None:intergenic 30.0%
TGCTTATAATAGTGATTGGA+TGG + chr6_1:97519190-97519209 Msa0901190:three_prime_UTR 30.0%
GATGAAAGACTCTAATTGAA+AGG - chr6_1:97519297-97519316 None:intergenic 30.0%
!! TTGGGTCATATTAACTTGTA+TGG - chr6_1:97519438-97519457 None:intergenic 30.0%
GGAGTTTGATTAAAAGAGTT+TGG - chr6_1:97519457-97519476 None:intergenic 30.0%
TTGTGTGTGAAAAAAAGGTT+TGG - chr6_1:97519518-97519537 None:intergenic 30.0%
!!! TATTTTAATGCCCTTTTCCT+TGG + chr6_1:97519594-97519613 Msa0901190:three_prime_UTR 30.0%
! TTTTGTCTTTATCATGTGTG+CGG + chr6_1:97519629-97519648 Msa0901190:three_prime_UTR 30.0%
AAATTTCCAACCCTATTCTT+AGG + chr6_1:97519700-97519719 Msa0901190:three_prime_UTR 30.0%
TAATCATAATGTTGGGGATT+TGG - chr6_1:97519771-97519790 None:intergenic 30.0%
GGACTATAATCATAATGTTG+GGG - chr6_1:97519777-97519796 None:intergenic 30.0%
GGGACTATAATCATAATGTT+GGG - chr6_1:97519778-97519797 None:intergenic 30.0%
AGGGACTATAATCATAATGT+TGG - chr6_1:97519779-97519798 None:intergenic 30.0%
!!! TTGAGTGATCATGTTGTTTT+GGG - chr6_1:97520021-97520040 None:intergenic 30.0%
! GTTTTTGATGAATACCAATG+AGG - chr6_1:97520053-97520072 None:intergenic 30.0%
CATTGGTATTCATCAAAAAC+TGG + chr6_1:97520053-97520072 Msa0901190:three_prime_UTR 30.0%
AGGAAACAATGTCAAGAAAA+GGG - chr6_1:97520121-97520140 None:intergenic 30.0%
AAGGAAACAATGTCAAGAAA+AGG - chr6_1:97520122-97520141 None:intergenic 30.0%
!! TCTAGTTTCTTGACATTTTC+AGG - chr6_1:97520443-97520462 None:intergenic 30.0%
!! GTAAATTTGATTTGCCTCAA+AGG + chr6_1:97520558-97520577 Msa0901190:three_prime_UTR 30.0%
TGTTTAATAACTACCCTTTG+AGG - chr6_1:97520575-97520594 None:intergenic 30.0%
TCAAAGGGTAGTTATTAAAC+AGG + chr6_1:97520574-97520593 Msa0901190:three_prime_UTR 30.0%
CTGGTATATTGTATTCATCT+GGG + chr6_1:97520606-97520625 Msa0901190:three_prime_UTR 30.0%
AAACCATACACATGAAACAT+TGG - chr6_1:97520761-97520780 None:intergenic 30.0%
TTGACATTGATGAGGTTATT+AGG + chr6_1:97520840-97520859 Msa0901190:three_prime_UTR 30.0%
TGACATTGATGAGGTTATTA+GGG + chr6_1:97520841-97520860 Msa0901190:three_prime_UTR 30.0%
ACCTGTATAAAATCAACGTT+CGG - chr6_1:97521037-97521056 None:intergenic 30.0%
TCAAGCAATCATATAAACGA+TGG - chr6_1:97521109-97521128 None:intergenic 30.0%
AATAAGTTGTTTAGCCAAAC+AGG - chr6_1:97521247-97521266 None:intergenic 30.0%
GTTTGGCTAAACAACTTATT+TGG + chr6_1:97521247-97521266 Msa0901190:intron 30.0%
AAATAAGCTGAACAGAACTA+AGG + chr6_1:97521414-97521433 Msa0901190:intron 30.0%
TAAGGAAAAATGTCAAAGCT+AGG + chr6_1:97521432-97521451 Msa0901190:intron 30.0%
AAGGAAAAATGTCAAAGCTA+GGG + chr6_1:97521433-97521452 Msa0901190:intron 30.0%
TACTAAAATTAGTCCCACAT+CGG + chr6_1:97521861-97521880 Msa0901190:intron 30.0%
AGAGTTTGAAAACAATACAC+AGG + chr6_1:97521884-97521903 Msa0901190:intron 30.0%
!! CTGTAAGATTGTTTCTTTTC+AGG + chr6_1:97522482-97522501 Msa0901190:intron 30.0%
!! ATTGTTTCTTTTCAGGGTTA+TGG + chr6_1:97522489-97522508 Msa0901190:intron 30.0%
ATTCACAACTATTCGTCAAT+AGG + chr6_1:97522561-97522580 Msa0901190:three_prime_UTR 30.0%
TTCACAACTATTCGTCAATA+GGG + chr6_1:97522562-97522581 Msa0901190:three_prime_UTR 30.0%
AAAACACGGGAGTAATATAA+AGG + chr6_1:97522733-97522752 Msa0901190:intron 30.0%
! TTTTCCCATCTAGTGAAAAA+AGG - chr6_1:97523179-97523198 None:intergenic 30.0%
AACTCTTTCCTTTAATTCTC+AGG + chr6_1:97523331-97523350 Msa0901190:intron 30.0%
TCAAGTATCCTGAGAATTAA+AGG - chr6_1:97523342-97523361 None:intergenic 30.0%
CAACAATTGATAAAGATGGT+TGG + chr6_1:97523383-97523402 Msa0901190:three_prime_UTR 30.0%
TCAGGATGGATATTTACATT+TGG + chr6_1:97523435-97523454 Msa0901190:three_prime_UTR 30.0%
TATCAAATACAAGGGATTTC+AGG + chr6_1:97523477-97523496 Msa0901190:three_prime_UTR 30.0%
!! GATTTCAGGTATCTACTTTT+AGG + chr6_1:97523491-97523510 Msa0901190:intron 30.0%
TTCATATACTTACGCTGTAA+CGG - chr6_1:97523671-97523690 None:intergenic 30.0%
TACCAAAGAAAGACAATACA+TGG + chr6_1:97524176-97524195 Msa0901190:three_prime_UTR 30.0%
TTACCATAACATGAAATTGG+TGG + chr6_1:97524203-97524222 Msa0901190:three_prime_UTR 30.0%
TAGAAAGTTCAAAAACCAGA+AGG + chr6_1:97524360-97524379 Msa0901190:three_prime_UTR 30.0%
!!! GATGGTTTTTTTTTTCCTTC+TGG - chr6_1:97524378-97524397 None:intergenic 30.0%
! TATAACTGACTAAAGGTGTA+CGG - chr6_1:97524413-97524432 None:intergenic 30.0%
CTCTTACTATAACTGACTAA+AGG - chr6_1:97524420-97524439 None:intergenic 30.0%
ATTTCTCTAGTGCATTTACA+AGG - chr6_1:97524445-97524464 None:intergenic 30.0%
! ATTGAAAAGTATGACACAAC+AGG - chr6_1:97524546-97524565 None:intergenic 30.0%
! TGTCATACTTTTCAATTCAG+TGG + chr6_1:97524550-97524569 Msa0901190:three_prime_UTR 30.0%
TCTTTGCCTGAAGAAAAATA+AGG - chr6_1:97524645-97524664 None:intergenic 30.0%
CACTAATAACAGAATCATTC+AGG + chr6_1:97524697-97524716 Msa0901190:three_prime_UTR 30.0%
AAAGGGTCTATTAAATCCTG+GGG - chr6_1:97509628-97509647 None:intergenic 35.0%
GAAAAGGGTCTATTAAATCC+TGG - chr6_1:97509630-97509649 None:intergenic 35.0%
! ACCCTTTTCGATTAAAATCG+AGG + chr6_1:97509641-97509660 Msa0901190:intron 35.0%
ACTCATCTGTAGCACATAAA+AGG - chr6_1:97509779-97509798 None:intergenic 35.0%
CGCAGAAGTTTATAACATAC+AGG - chr6_1:97509826-97509845 None:intergenic 35.0%
CACCTTACATACATAAACAG+GGG + chr6_1:97510223-97510242 Msa0901190:intron 35.0%
GTGCAATTTCCTAAAGTTCA+GGG - chr6_1:97510285-97510304 None:intergenic 35.0%
! TCCTTATTTGTTTGCACCTA+TGG + chr6_1:97510310-97510329 Msa0901190:intron 35.0%
AAATGAGGTGAGAGATACTT+GGG - chr6_1:97510380-97510399 None:intergenic 35.0%
TAAATGAGGTGAGAGATACT+TGG - chr6_1:97510381-97510400 None:intergenic 35.0%
TTCTGTACAAATGTCATGTC+TGG + chr6_1:97510436-97510455 Msa0901190:intron 35.0%
! GATTCCCCTTTAATCCATTT+TGG - chr6_1:97510587-97510606 None:intergenic 35.0%
CGTTGACGCAGTTAAAATAA+AGG + chr6_1:97511150-97511169 Msa0901190:intron 35.0%
!!! TCACCTGTGTTTTAGTGAAT+TGG + chr6_1:97511327-97511346 Msa0901190:intron 35.0%
AATTGGATTCTCAAGGGTTA+TGG + chr6_1:97511344-97511363 Msa0901190:intron 35.0%
TGTATGTTAGCAACTCCTAT+AGG + chr6_1:97511675-97511694 Msa0901190:intron 35.0%
! TTTTAGCAAGCTACACCTTA+AGG - chr6_1:97511777-97511796 None:intergenic 35.0%
ACTCCCACATAAAAACTAGT+GGG + chr6_1:97511798-97511817 Msa0901190:intron 35.0%
!!! ACACCCACTAGTTTTTATGT+GGG - chr6_1:97511804-97511823 None:intergenic 35.0%
! TTGCAGTTGTTTCCGTTTAA+AGG + chr6_1:97512247-97512266 Msa0901190:intron 35.0%
CTGACATGAAAATGAAAGGT+TGG + chr6_1:97512681-97512700 Msa0901190:intron 35.0%
! ATGGTATGTAGAGATTGGTT+TGG - chr6_1:97512847-97512866 None:intergenic 35.0%
GTGAACCTATATAAACTGTG+TGG + chr6_1:97513275-97513294 Msa0901190:intron 35.0%
AGGTTTGTGCACGATTATTA+AGG - chr6_1:97513618-97513637 None:intergenic 35.0%
GACTATAATTTAGAGACGGA+GGG + chr6_1:97513643-97513662 Msa0901190:intron 35.0%
AGGCGTATGCAAATTTATGA+AGG - chr6_1:97513723-97513742 None:intergenic 35.0%
TTTATACTATTACCGACGGA+AGG - chr6_1:97513743-97513762 None:intergenic 35.0%
CCTTAAAGACTTTGGTTAAG+AGG - chr6_1:97514159-97514178 None:intergenic 35.0%
CCTCTTAACCAAAGTCTTTA+AGG + chr6_1:97514156-97514175 Msa0901190:intron 35.0%
! CTTCTCGATGCCAATTTTAA+TGG - chr6_1:97514321-97514340 None:intergenic 35.0%
! TTTAGTGACGGAATTAGAGA+GGG - chr6_1:97514411-97514430 None:intergenic 35.0%
! ATTTAGTGACGGAATTAGAG+AGG - chr6_1:97514412-97514431 None:intergenic 35.0%
TTGGTCGCAAAATTTAGTGA+CGG - chr6_1:97514423-97514442 None:intergenic 35.0%
TTAGGGAAGGAAATTAGTGA+CGG - chr6_1:97514472-97514491 None:intergenic 35.0%
! AAGAGGCCAAATTTTGTAGT+TGG - chr6_1:97514605-97514624 None:intergenic 35.0%
GGATCTTCGAATTTATCAAG+AGG - chr6_1:97514622-97514641 None:intergenic 35.0%
! TTTTCATCATTCATGGCTAG+TGG + chr6_1:97514672-97514691 Msa0901190:intron 35.0%
! ATTCATGGCTAGTGGATAAT+TGG + chr6_1:97514680-97514699 Msa0901190:intron 35.0%
!! AAATGTTAACTTGTGCCCTT+AGG + chr6_1:97514976-97514995 Msa0901190:intron 35.0%
!! AATGTTAACTTGTGCCCTTA+GGG + chr6_1:97514977-97514996 Msa0901190:intron 35.0%
!!! ATCCTTATTTTGTGCCCTAA+GGG - chr6_1:97514994-97515013 None:intergenic 35.0%
TTTCTTATCTTGTGCCCTTA+GGG + chr6_1:97515116-97515135 Msa0901190:intron 35.0%
GCAAGACCCTTATATAAACA+TGG + chr6_1:97515249-97515268 Msa0901190:intron 35.0%
TGAAAGTAAGTTCTCACTTG+TGG + chr6_1:97515328-97515347 Msa0901190:intron 35.0%
ACCAAGTCAACATTATACAC+AGG - chr6_1:97515502-97515521 None:intergenic 35.0%
!! CTAGTGTTTTTATGTGTACG+AGG + chr6_1:97515623-97515642 Msa0901190:intron 35.0%
!!! AGATGAGAATTTGCCACTTT+TGG - chr6_1:97515673-97515692 None:intergenic 35.0%
! GGTTTGACCGTTAATTGTTT+TGG - chr6_1:97516158-97516177 None:intergenic 35.0%
ATCATGTGTCATGTAGAATG+TGG - chr6_1:97516256-97516275 None:intergenic 35.0%
CTTGGATAATGAGGGAAAAA+AGG - chr6_1:97516475-97516494 None:intergenic 35.0%
ACCTTGAATAGTAACATCAG+CGG + chr6_1:97516569-97516588 Msa0901190:intron 35.0%
AACATCAGCGGTAACAATAA+CGG + chr6_1:97516581-97516600 Msa0901190:intron 35.0%
ATGAGGAACAAAACAATGAC+AGG - chr6_1:97516733-97516752 None:intergenic 35.0%
TTGGGGCATAGTATAATACT+AGG - chr6_1:97517046-97517065 None:intergenic 35.0%
! ATCACTGGTTGTTTGTGAAT+CGG - chr6_1:97517129-97517148 None:intergenic 35.0%
AAAGCAGAATCAGTGAATCA+GGG - chr6_1:97517334-97517353 None:intergenic 35.0%
AAAAGCAGAATCAGTGAATC+AGG - chr6_1:97517335-97517354 None:intergenic 35.0%
!! ACAGTGTTGTTTACTTGGTT+TGG - chr6_1:97517358-97517377 None:intergenic 35.0%
ACCAAGTAAACAACACTGTT+TGG + chr6_1:97517359-97517378 Msa0901190:intron 35.0%
!! ACCAAACAGTGTTGTTTACT+TGG - chr6_1:97517363-97517382 None:intergenic 35.0%
!! AGACAGTAGTAATGTTTTGG+GGG + chr6_1:97517504-97517523 Msa0901190:intron 35.0%
! TTTCAGGTAAATTCAGGGAA+AGG + chr6_1:97517769-97517788 Msa0901190:intron 35.0%
! GCATAATTTTCATAGGCTCT+TGG + chr6_1:97518076-97518095 Msa0901190:intron 35.0%
AACATGAAAGTTCTCATCAC+TGG - chr6_1:97518172-97518191 None:intergenic 35.0%
TGAGAACTTTCATGTTACTC+GGG + chr6_1:97518176-97518195 Msa0901190:CDS 35.0%
AAAACTGAGGTACAATACTG+AGG - chr6_1:97518327-97518346 None:intergenic 35.0%
! AGTTGAATAAGTGAGGTGTT+CGG - chr6_1:97518518-97518537 None:intergenic 35.0%
GCGTTTGTAGAAAAACAAAG+TGG + chr6_1:97518711-97518730 Msa0901190:three_prime_UTR 35.0%
! AAAGCACTTAGAACAGACAA+AGG + chr6_1:97518744-97518763 Msa0901190:three_prime_UTR 35.0%
TTTGTCTTTATCATGTGTGC+GGG + chr6_1:97519630-97519649 Msa0901190:three_prime_UTR 35.0%
TGGAAATTTCTGTACGCATT+TGG - chr6_1:97519689-97519708 None:intergenic 35.0%
TTGTTGGGATCCTAAGAATA+GGG - chr6_1:97519713-97519732 None:intergenic 35.0%
TTTGTTGGGATCCTAAGAAT+AGG - chr6_1:97519714-97519733 None:intergenic 35.0%
AGGGTGAAATTGTCTTTGTT+GGG - chr6_1:97519728-97519747 None:intergenic 35.0%
AAGGGTGAAATTGTCTTTGT+TGG - chr6_1:97519729-97519748 None:intergenic 35.0%
! TGTTGGGGATTTGGAATATT+TGG - chr6_1:97519762-97519781 None:intergenic 35.0%
GAACGTAATAGCTACGTTTA+GGG - chr6_1:97519798-97519817 None:intergenic 35.0%
! GTTTTGTGTTTGTGGAAATG+GGG - chr6_1:97519831-97519850 None:intergenic 35.0%
!! GGTTTTGTGTTTGTGGAAAT+GGG - chr6_1:97519832-97519851 None:intergenic 35.0%
!! AGGTTTTGTGTTTGTGGAAA+TGG - chr6_1:97519833-97519852 None:intergenic 35.0%
!!! AAAGGGTGTTGTGTTTTTTG+AGG - chr6_1:97519873-97519892 None:intergenic 35.0%
GTGGTGTAAAATGTTGAATG+TGG - chr6_1:97519938-97519957 None:intergenic 35.0%
!! GTTGAGTGATCATGTTGTTT+TGG - chr6_1:97520022-97520041 None:intergenic 35.0%
! ATGAGGGTGTGAAAAAATGA+AGG - chr6_1:97520141-97520160 None:intergenic 35.0%
!!! ATTTTTTCACACCCTCATGA+TGG + chr6_1:97520143-97520162 Msa0901190:three_prime_UTR 35.0%
!!! TTTTTTCACACCCTCATGAT+GGG + chr6_1:97520144-97520163 Msa0901190:three_prime_UTR 35.0%
CCCAGATGAAGAATCAATAA+GGG - chr6_1:97520177-97520196 None:intergenic 35.0%
!! CCCTTATTGATTCTTCATCT+GGG + chr6_1:97520174-97520193 Msa0901190:three_prime_UTR 35.0%
ACCCAGATGAAGAATCAATA+AGG - chr6_1:97520178-97520197 None:intergenic 35.0%
GTTACCTTTAGTCAAATCCA+TGG + chr6_1:97520220-97520239 Msa0901190:three_prime_UTR 35.0%
GCTTCTGCTTTACACAAAAT+GGG + chr6_1:97520242-97520261 Msa0901190:three_prime_UTR 35.0%
GAACAGCCAATAGTATAACA+GGG - chr6_1:97520319-97520338 None:intergenic 35.0%
AGAACAGCCAATAGTATAAC+AGG - chr6_1:97520320-97520339 None:intergenic 35.0%
! CTATTGGCTGTTCTGTATTT+AGG + chr6_1:97520326-97520345 Msa0901190:three_prime_UTR 35.0%
ACACTACTAAGAGGATTCAA+TGG - chr6_1:97520365-97520384 None:intergenic 35.0%
TTGAATCCTCTTAGTAGTGT+TGG + chr6_1:97520365-97520384 Msa0901190:three_prime_UTR 35.0%
GTCAAGAAACTAGAGCTATT+AGG + chr6_1:97520449-97520468 Msa0901190:three_prime_UTR 35.0%
AAGAAACTAGAGCTATTAGG+TGG + chr6_1:97520452-97520471 Msa0901190:three_prime_UTR 35.0%
!! TTTTCTGGCACAGCAATAAT+GGG - chr6_1:97520485-97520504 None:intergenic 35.0%
!! ATTTTCTGGCACAGCAATAA+TGG - chr6_1:97520486-97520505 None:intergenic 35.0%
! CTCAAATCCTTCTCATTTTC+TGG - chr6_1:97520500-97520519 None:intergenic 35.0%
CAGAAAATGAGAAGGATTTG+AGG + chr6_1:97520498-97520517 Msa0901190:three_prime_UTR 35.0%
ATTAAACAGGAAGATACTGC+TGG + chr6_1:97520587-97520606 Msa0901190:three_prime_UTR 35.0%
GCTGGTATATTGTATTCATC+TGG + chr6_1:97520605-97520624 Msa0901190:three_prime_UTR 35.0%
TTGCCAATGTTTCATGTGTA+TGG + chr6_1:97520755-97520774 Msa0901190:three_prime_UTR 35.0%
GAGGAAATTTGACATTGATG+AGG + chr6_1:97520832-97520851 Msa0901190:three_prime_UTR 35.0%
CCTGTATAAAATCAACGTTC+GGG - chr6_1:97521036-97521055 None:intergenic 35.0%
!! GTCGTTTTCATAAGCTATCT+TGG + chr6_1:97521380-97521399 Msa0901190:intron 35.0%
GACAATTGTCTCATTGAACT+TGG + chr6_1:97521502-97521521 Msa0901190:intron 35.0%
! TGTATATAGTTCGACTCGAT+TGG + chr6_1:97521594-97521613 Msa0901190:intron 35.0%
GTTTGAAAACAATACACAGG+AGG + chr6_1:97521887-97521906 Msa0901190:intron 35.0%
! TAAGTTTTGCGAGACTGTTT+GGG - chr6_1:97522319-97522338 None:intergenic 35.0%
! ATAAGTTTTGCGAGACTGTT+TGG - chr6_1:97522320-97522339 None:intergenic 35.0%
AATTGTTTGAGCTTGTCTAC+TGG - chr6_1:97522344-97522363 None:intergenic 35.0%
! ATGCAAATCTAGGGTAAGAT+TGG - chr6_1:97522774-97522793 None:intergenic 35.0%
ATCAACCTCATGCAAATCTA+GGG - chr6_1:97522783-97522802 None:intergenic 35.0%
AATCAACCTCATGCAAATCT+AGG - chr6_1:97522784-97522803 None:intergenic 35.0%
! TTTGCATGAGGTTGATTCAA+TGG + chr6_1:97522787-97522806 Msa0901190:intron 35.0%
ATGATATTTCTCAAGGACAC+AGG - chr6_1:97522920-97522939 None:intergenic 35.0%
ATAGCGAACAACAACAATCA+AGG + chr6_1:97523153-97523172 Msa0901190:intron 35.0%
!!! AAGGCCTTTTTTCACTAGAT+GGG + chr6_1:97523172-97523191 Msa0901190:intron 35.0%
! AGAAAAAAGAAGGTACAGGT+AGG - chr6_1:97523273-97523292 None:intergenic 35.0%
! GACAAGAAAAAAGAAGGTAC+AGG - chr6_1:97523277-97523296 None:intergenic 35.0%
CAGCAAGACAAGAAAAAAGA+AGG - chr6_1:97523283-97523302 None:intergenic 35.0%
CTCAGGATACTTGAATAATG+AGG + chr6_1:97523348-97523367 Msa0901190:intron 35.0%
! AAAGATGGTTGGTTACATAC+AGG + chr6_1:97523394-97523413 Msa0901190:three_prime_UTR 35.0%
!! AAGAGGCACTTTAGAAGATT+AGG - chr6_1:97523743-97523762 None:intergenic 35.0%
!! AATCTTCTAAAGTGCCTCTT+TGG + chr6_1:97523743-97523762 Msa0901190:intron 35.0%
TTGCTTGACTTCTAAACTCT+AGG + chr6_1:97524123-97524142 Msa0901190:three_prime_UTR 35.0%
TGCTTGACTTCTAAACTCTA+GGG + chr6_1:97524124-97524143 Msa0901190:three_prime_UTR 35.0%
CAAAGAAAGACAATACATGG+CGG + chr6_1:97524179-97524198 Msa0901190:three_prime_UTR 35.0%
AAAGAAAGACAATACATGGC+GGG + chr6_1:97524180-97524199 Msa0901190:three_prime_UTR 35.0%
GGGTTACCATAACATGAAAT+TGG + chr6_1:97524200-97524219 Msa0901190:three_prime_UTR 35.0%
AGTCCACCAATTTCATGTTA+TGG - chr6_1:97524209-97524228 None:intergenic 35.0%
! ATAACTGACTAAAGGTGTAC+GGG - chr6_1:97524412-97524431 None:intergenic 35.0%
! ACTTTTGAACTCTTGATGCA+TGG + chr6_1:97524466-97524485 Msa0901190:three_prime_UTR 35.0%
!! TCAGTGGTTAAGATTTTTGG+TGG + chr6_1:97524566-97524585 Msa0901190:three_prime_UTR 35.0%
!!! TTAAGATTTTTGGTGGTGGA+AGG + chr6_1:97524573-97524592 Msa0901190:three_prime_UTR 35.0%
AAGGGTCTATTAAATCCTGG+GGG - chr6_1:97509627-97509646 None:intergenic 40.0%
AATTTCTCGTGCGTCTTATC+CGG - chr6_1:97510126-97510145 None:intergenic 40.0%
GTGTCCCTCATTTAAGAACA+AGG - chr6_1:97510171-97510190 None:intergenic 40.0%
CTTACATACATAAACAGGGG+CGG + chr6_1:97510226-97510245 Msa0901190:intron 40.0%
GGTGCAATTTCCTAAAGTTC+AGG - chr6_1:97510286-97510305 None:intergenic 40.0%
GCCATAGGTGCAAACAAATA+AGG - chr6_1:97510314-97510333 None:intergenic 40.0%
GCAAACTGAAAAAATCAGGG+TGG - chr6_1:97510336-97510355 None:intergenic 40.0%
GGGGCAAACTGAAAAAATCA+GGG - chr6_1:97510339-97510358 None:intergenic 40.0%
TGGGGCAAACTGAAAAAATC+AGG - chr6_1:97510340-97510359 None:intergenic 40.0%
AATGAGGTGAGAGATACTTG+GGG - chr6_1:97510379-97510398 None:intergenic 40.0%
ACGCAGTTCTTATGCCAAAA+TGG + chr6_1:97510570-97510589 Msa0901190:intron 40.0%
AACTCCTATAGGCATTTGCT+AGG + chr6_1:97511686-97511705 Msa0901190:intron 40.0%
GTATCCTAGCAAATGCCTAT+AGG - chr6_1:97511693-97511712 None:intergenic 40.0%
CACTCCCACATAAAAACTAG+TGG + chr6_1:97511797-97511816 Msa0901190:intron 40.0%
!!! CACACCCACTAGTTTTTATG+TGG - chr6_1:97511805-97511824 None:intergenic 40.0%
TTGTTTGTGAGAGTTCACGA+TGG - chr6_1:97512594-97512613 None:intergenic 40.0%
GACTATCCAATTTAAGGAGG+TGG + chr6_1:97512642-97512661 Msa0901190:intron 40.0%
TCACTACCACCTCCTTAAAT+TGG - chr6_1:97512651-97512670 None:intergenic 40.0%
! TAAGGAGGTGGTAGTGAATT+AGG + chr6_1:97512654-97512673 Msa0901190:intron 40.0%
ATAGGTTCACTTCGCATCTT+TGG - chr6_1:97513265-97513284 None:intergenic 40.0%
GACAATTATTGTGAGACGGA+GGG - chr6_1:97513398-97513417 None:intergenic 40.0%
AGACAATTATTGTGAGACGG+AGG - chr6_1:97513399-97513418 None:intergenic 40.0%
CGACTATAATTTAGAGACGG+AGG + chr6_1:97513642-97513661 Msa0901190:intron 40.0%
! GTCACTAAATTTTGCGACCA+AGG + chr6_1:97514422-97514441 Msa0901190:intron 40.0%
! TGGCTAGTGGATAATTGGAT+TGG + chr6_1:97514685-97514704 Msa0901190:intron 40.0%
AATGTTAACCAGTGCCCTAA+GGG + chr6_1:97514893-97514912 Msa0901190:intron 40.0%
ATGCTTAACCAATGCCCTTA+GGG - chr6_1:97514910-97514929 None:intergenic 40.0%
!!! GATCCTTATTTTGTGCCCTA+AGG - chr6_1:97514995-97515014 None:intergenic 40.0%
GTTTCTTATCTTGTGCCCTT+AGG + chr6_1:97515115-97515134 Msa0901190:intron 40.0%
!! CTTGTTAACTTGTGCCCTAA+GGG - chr6_1:97515133-97515152 None:intergenic 40.0%
!! TCTTGTTAACTTGTGCCCTA+AGG - chr6_1:97515134-97515153 None:intergenic 40.0%
AATCCTTAACCATTGTCCTC+AGG + chr6_1:97515216-97515235 Msa0901190:intron 40.0%
ATCCTTAACCATTGTCCTCA+GGG + chr6_1:97515217-97515236 Msa0901190:intron 40.0%
TGAGAAATGGGGTGCATTAT+TGG + chr6_1:97515295-97515314 Msa0901190:intron 40.0%
! TTAGTCACTTTCATGTGAGC+AGG - chr6_1:97515391-97515410 None:intergenic 40.0%
! GCCTGTGTATAATGTTGACT+TGG + chr6_1:97515498-97515517 Msa0901190:intron 40.0%
TCAACAAAAGCCTAGATGGT+AGG + chr6_1:97516512-97516531 Msa0901190:intron 40.0%
TGTTACTATTCAAGGTCGTG+TGG - chr6_1:97516565-97516584 None:intergenic 40.0%
ACCGCTGATGTTACTATTCA+AGG - chr6_1:97516573-97516592 None:intergenic 40.0%
TCTTTCATCACAACACGAAC+CGG - chr6_1:97516990-97517009 None:intergenic 40.0%
!! GAATCGGTGATTTTGATCAC+TGG - chr6_1:97517144-97517163 None:intergenic 40.0%
!! GTGATGACTGATGATGGAAT+CGG - chr6_1:97517189-97517208 None:intergenic 40.0%
TGAAGTGAAACGAGTGGAAT+CGG - chr6_1:97517233-97517252 None:intergenic 40.0%
AATGGATGAAGTGAAACGAG+TGG - chr6_1:97517239-97517258 None:intergenic 40.0%
TCACTTCATCCATTCCATCA+CGG + chr6_1:97517245-97517264 Msa0901190:intron 40.0%
!! AGCCTTGATGATGCAGAAAT+CGG - chr6_1:97517282-97517301 None:intergenic 40.0%
GAATCAGTGAATCAGGGATT+TGG - chr6_1:97517328-97517347 None:intergenic 40.0%
AACACTGTTTGGTAAGTGCT+AGG + chr6_1:97517370-97517389 Msa0901190:intron 40.0%
TCAACAAGTCCAAGTAGTTG+CGG - chr6_1:97517902-97517921 None:intergenic 40.0%
AGATTTCGATGTATGCCTCA+TGG + chr6_1:97517987-97518006 Msa0901190:intron 40.0%
TTGCTGAAACCTTGTTCTAG+GGG - chr6_1:97518024-97518043 None:intergenic 40.0%
CTTGCTGAAACCTTGTTCTA+GGG - chr6_1:97518025-97518044 None:intergenic 40.0%
TCTTGCTGAAACCTTGTTCT+AGG - chr6_1:97518026-97518045 None:intergenic 40.0%
ATAGCTGTTGGGAAATTGAG+AGG + chr6_1:97518264-97518283 Msa0901190:CDS 40.0%
TAGCTGTTGGGAAATTGAGA+GGG + chr6_1:97518265-97518284 Msa0901190:CDS 40.0%
AAATTGAGAGGGACTTCACA+AGG + chr6_1:97518276-97518295 Msa0901190:CDS 40.0%
TGCACTAACGTGAAAAACTG+AGG - chr6_1:97518340-97518359 None:intergenic 40.0%
! GTTGAATAAGTGAGGTGTTC+GGG - chr6_1:97518517-97518536 None:intergenic 40.0%
AAAGGCCAAGAATACCTCAT+CGG + chr6_1:97518762-97518781 Msa0901190:three_prime_UTR 40.0%
GGAACGTAATAGCTACGTTT+AGG - chr6_1:97519799-97519818 None:intergenic 40.0%
GTGGAAATGGGGATATGAAA+AGG - chr6_1:97519820-97519839 None:intergenic 40.0%
!! GTGTGAAGGTTTTGTGTTTG+TGG - chr6_1:97519839-97519858 None:intergenic 40.0%
!!! TGTTGTGTTTTTTGAGGCTG+TGG - chr6_1:97519867-97519886 None:intergenic 40.0%
! CAGAAAAGAGAACGGTTTTG+TGG - chr6_1:97519957-97519976 None:intergenic 40.0%
ATGAATACCAATGAGGGTGA+GGG - chr6_1:97520046-97520065 None:intergenic 40.0%
ATGTCAAGAAAAGGGTCAGT+TGG - chr6_1:97520113-97520132 None:intergenic 40.0%
! TTTTTCACACCCTCATGATG+GGG + chr6_1:97520145-97520164 Msa0901190:three_prime_UTR 40.0%
!! GCCCTTATTGATTCTTCATC+TGG + chr6_1:97520173-97520192 Msa0901190:three_prime_UTR 40.0%
GAAGCCATGGATTTGACTAA+AGG - chr6_1:97520227-97520246 None:intergenic 40.0%
TTTGTGTAAAGCAGAAGCCA+TGG - chr6_1:97520240-97520259 None:intergenic 40.0%
GGCTTCTGCTTTACACAAAA+TGG + chr6_1:97520241-97520260 Msa0901190:three_prime_UTR 40.0%
CACAAAATGGGTGTTTCACA+AGG + chr6_1:97520254-97520273 Msa0901190:three_prime_UTR 40.0%
ATTTCGCCAACACTACTAAG+AGG - chr6_1:97520374-97520393 None:intergenic 40.0%
TGTTGGCGAAATTCGTAAAC+AGG + chr6_1:97520382-97520401 Msa0901190:three_prime_UTR 40.0%
! TTGTATTCATCTGGGACTAC+AGG + chr6_1:97520614-97520633 Msa0901190:three_prime_UTR 40.0%
AACAGCTAGAAACACACACT+TGG - chr6_1:97520735-97520754 None:intergenic 40.0%
GCTCTACAGTCATTGTAATG+AGG + chr6_1:97520813-97520832 Msa0901190:three_prime_UTR 40.0%
ATTGTCAATGCCGACAACAT+CGG - chr6_1:97520908-97520927 None:intergenic 40.0%
! GCATTGACAATGAAGGCAAA+GGG + chr6_1:97520917-97520936 Msa0901190:three_prime_UTR 40.0%
!! ATGAAGGCAAAGGGTGTTAA+TGG + chr6_1:97520926-97520945 Msa0901190:three_prime_UTR 40.0%
! TAAGTTGCAGAGTTTGAGAC+AGG + chr6_1:97520952-97520971 Msa0901190:three_prime_UTR 40.0%
!!! CCCGAACGTTGATTTTATAC+AGG + chr6_1:97521033-97521052 Msa0901190:three_prime_UTR 40.0%
AAAAATGTCAAAGCTAGGGC+TGG + chr6_1:97521437-97521456 Msa0901190:intron 40.0%
!! GAACTATTGTCGAGTTGGTT+CGG - chr6_1:97521470-97521489 None:intergenic 40.0%
GTTTCGAACTATTGTCGAGT+TGG - chr6_1:97521475-97521494 None:intergenic 40.0%
! GTTTTCAAACTCTCCGATGT+GGG - chr6_1:97521877-97521896 None:intergenic 40.0%
! TGTTTTCAAACTCTCCGATG+TGG - chr6_1:97521878-97521897 None:intergenic 40.0%
AAAACAATTGTACCGTAGCG+CGG - chr6_1:97521959-97521978 None:intergenic 40.0%
AGTTCACGAACAACTCGATT+CGG - chr6_1:97522138-97522157 None:intergenic 40.0%
!! AAAATAGCTTTGACTAGGGC+TGG - chr6_1:97522286-97522305 None:intergenic 40.0%
GTTGTGGATGTGAACATCAA+TGG - chr6_1:97522391-97522410 None:intergenic 40.0%
CTATTCGTCAATAGGGTTGT+TGG + chr6_1:97522569-97522588 Msa0901190:three_prime_UTR 40.0%
AAAGTGGTAGACTGGAACAA+TGG + chr6_1:97522609-97522628 Msa0901190:three_prime_UTR 40.0%
TCTTACCCTAGATTTGCATG+AGG + chr6_1:97522775-97522794 Msa0901190:intron 40.0%
!!! GGGAGGTAGTTTTGACATAA+AGG - chr6_1:97522854-97522873 None:intergenic 40.0%
GAGCAAATATAGTAAAGGGG+AGG - chr6_1:97522871-97522890 None:intergenic 40.0%
!!! CAAGGCCTTTTTTCACTAGA+TGG + chr6_1:97523171-97523190 Msa0901190:intron 40.0%
TACAGGTAGGCTAAGGAATA+AGG - chr6_1:97523260-97523279 None:intergenic 40.0%
CTTCATCTTCGGCACTAATA+TGG - chr6_1:97523805-97523824 None:intergenic 40.0%
TTCCCCAGTTTCTTCATCTT+CGG - chr6_1:97523816-97523835 None:intergenic 40.0%
TTCTTGACAACAAATGCGAC+TGG - chr6_1:97523842-97523861 None:intergenic 40.0%
!! AGTCGCATTTGTTGTCAAGA+AGG + chr6_1:97523841-97523860 Msa0901190:three_prime_UTR 40.0%
!! GCATTTGTTGTCAAGAAGGT+TGG + chr6_1:97523845-97523864 Msa0901190:three_prime_UTR 40.0%
ACATAATCGACCACATGCTT+CGG - chr6_1:97523884-97523903 None:intergenic 40.0%
! GAGCAGGTTCTTCTTTTGAT+TGG + chr6_1:97523908-97523927 Msa0901190:intron 40.0%
CGCCATGTATTGTCTTTCTT+TGG - chr6_1:97524181-97524200 None:intergenic 40.0%
! TAACTGACTAAAGGTGTACG+GGG - chr6_1:97524411-97524430 None:intergenic 40.0%
!!! GTGGTTAAGATTTTTGGTGG+TGG + chr6_1:97524569-97524588 Msa0901190:three_prime_UTR 40.0%
TAATTATACGCTAACCCCCC+AGG + chr6_1:97509609-97509628 Msa0901190:intron 45.0%
AGGGTCTATTAAATCCTGGG+GGG - chr6_1:97509626-97509645 None:intergenic 45.0%
AGAGTCTCACACACAACTCT+GGG - chr6_1:97509707-97509726 None:intergenic 45.0%
!! GCTTTCAAGTTGGGAACGTT+TGG + chr6_1:97509940-97509959 Msa0901190:intron 45.0%
CGCCCCTGTTTATGTATGTA+AGG - chr6_1:97510228-97510247 None:intergenic 45.0%
GAAAAAATCAGGGTGGCCAT+AGG - chr6_1:97510329-97510348 None:intergenic 45.0%
CGAACTCATGTACCCAATGT+AGG + chr6_1:97510606-97510625 Msa0901190:intron 45.0%
TTATGTACAGTGGCGTATCC+AGG - chr6_1:97511263-97511282 None:intergenic 45.0%
TGGATTCTCAAGGGTTATGG+AGG + chr6_1:97511347-97511366 Msa0901190:intron 45.0%
!! GATTTTGGAGGGGATAGCTT+TGG - chr6_1:97511912-97511931 None:intergenic 45.0%
!! GTATTTGGCTCGGTATCTAG+TGG + chr6_1:97512168-97512187 Msa0901190:intron 45.0%
CCACTGGTCATACCAAAAGA+TGG - chr6_1:97512280-97512299 None:intergenic 45.0%
! CCATCTTTTGGTATGACCAG+TGG + chr6_1:97512277-97512296 Msa0901190:intron 45.0%
AATTTGCATACGCCTTCCGT+CGG + chr6_1:97513728-97513747 Msa0901190:intron 45.0%
GAATGTTAACCAGTGCCCTA+AGG + chr6_1:97514892-97514911 Msa0901190:intron 45.0%
GATGCTTAACCAATGCCCTT+AGG - chr6_1:97514911-97514930 None:intergenic 45.0%
TGCCCTTAGGGCACAAAATA+AGG + chr6_1:97514989-97515008 Msa0901190:intron 45.0%
TTAGTCCGTAACTGTCACAC+CGG - chr6_1:97515992-97516011 None:intergenic 45.0%
CGACAACGAATGTGCAACAA+TGG + chr6_1:97516054-97516073 Msa0901190:intron 45.0%
TGTCATGTAGAATGTGGACG+AGG - chr6_1:97516250-97516269 None:intergenic 45.0%
!! TTTGGTGTCTCCTACCATCT+AGG - chr6_1:97516525-97516544 None:intergenic 45.0%
TTCAAGGTCGTGTGGTCAAT+AGG - chr6_1:97516557-97516576 None:intergenic 45.0%
GTCAGAGTGGGATGCTAATT+TGG + chr6_1:97516959-97516978 Msa0901190:intron 45.0%
! GGATGCTAATTTGGTTTCCC+CGG + chr6_1:97516968-97516987 Msa0901190:intron 45.0%
TTTCATCACAACACGAACCG+GGG - chr6_1:97516988-97517007 None:intergenic 45.0%
CTTTCATCACAACACGAACC+GGG - chr6_1:97516989-97517008 None:intergenic 45.0%
GAATCGGTGATGACTGATGA+TGG - chr6_1:97517173-97517192 None:intergenic 45.0%
!! CACCGATTTCTGCATCATCA+AGG + chr6_1:97517277-97517296 Msa0901190:intron 45.0%
!! GAATCAGGGATTTGGTGTGA+AGG - chr6_1:97517320-97517339 None:intergenic 45.0%
ACTCGCAAAGCTACAGCTAT+TGG + chr6_1:97517848-97517867 Msa0901190:CDS 45.0%
CAACAAGTCCAAGTAGTTGC+GGG - chr6_1:97517901-97517920 None:intergenic 45.0%
ACAAACCTGTATTCACCCCA+AGG - chr6_1:97517933-97517952 None:intergenic 45.0%
! TGCTGAAACCTTGTTCTAGG+GGG - chr6_1:97518023-97518042 None:intergenic 45.0%
GTGAGAAATGGGGTGCATTA+TGG - chr6_1:97515294-97515313 None:intergenic 45.0%
! TTGTGCCGATGAGGTATTCT+TGG - chr6_1:97518770-97518789 None:intergenic 45.0%
! GCTCTAAATTTGTGCCGATG+AGG - chr6_1:97518779-97518798 None:intergenic 45.0%
!! ACGCATTTGGCTCTCAAGTT+GGG - chr6_1:97519676-97519695 None:intergenic 45.0%
!! TACGCATTTGGCTCTCAAGT+TGG - chr6_1:97519677-97519696 None:intergenic 45.0%
TGGGATCCTAAGAATAGGGT+TGG - chr6_1:97519709-97519728 None:intergenic 45.0%
GATGAATACCAATGAGGGTG+AGG - chr6_1:97520047-97520066 None:intergenic 45.0%
GGGTCAGTTGGAAGATTTCT+AGG - chr6_1:97520101-97520120 None:intergenic 45.0%
CGTAAACAGGTTCAAGAGTG+TGG + chr6_1:97520395-97520414 Msa0901190:three_prime_UTR 45.0%
TGCTGTGCCAGAAAATGAGA+AGG + chr6_1:97520490-97520509 Msa0901190:three_prime_UTR 45.0%
TGGTTTATCGCTCTTTGCTG+CGG + chr6_1:97520775-97520794 Msa0901190:three_prime_UTR 45.0%
TGTTGTTCCACCGATGTTGT+CGG + chr6_1:97520895-97520914 Msa0901190:three_prime_UTR 45.0%
!! GTTGTCGGCATTGACAATGA+AGG + chr6_1:97520910-97520929 Msa0901190:three_prime_UTR 45.0%
!! GGCATTGACAATGAAGGCAA+AGG + chr6_1:97520916-97520935 Msa0901190:three_prime_UTR 45.0%
! AGTTTGAGACAGGTCTCTTG+CGG + chr6_1:97520962-97520981 Msa0901190:three_prime_UTR 45.0%
AATCAACGTTCGGGAAAGCA+TGG - chr6_1:97521027-97521046 None:intergenic 45.0%
ACTGCTATATAGGGCCTGTT+TGG + chr6_1:97521230-97521249 Msa0901190:intron 45.0%
CAGCTCAAGTTCAGCTCATT+TGG - chr6_1:97521536-97521555 None:intergenic 45.0%
TGTAATAAGCTACCGCGCTA+CGG + chr6_1:97521944-97521963 Msa0901190:intron 45.0%
!!! AATGGTACTTTTTTGCCCCC+AGG + chr6_1:97522627-97522646 Msa0901190:three_prime_UTR 45.0%
AGAGGGCCTTCTATTATGAG+AGG + chr6_1:97522672-97522691 Msa0901190:three_prime_UTR 45.0%
! CATGAGGTTGATTCAATGGC+TGG + chr6_1:97522791-97522810 Msa0901190:intron 45.0%
!! AAAGGTTTGAGTTGCTGCAG+TGG - chr6_1:97522836-97522855 None:intergenic 45.0%
!! GTTGCACTACAGCACTGATA+AGG - chr6_1:97523048-97523067 None:intergenic 45.0%
! AAGAAGGTACAGGTAGGCTA+AGG - chr6_1:97523267-97523286 None:intergenic 45.0%
AACACAGCTTCTAGATCAGC+AGG - chr6_1:97523619-97523638 None:intergenic 45.0%
! AGTGCCGAAGATGAAGAAAC+TGG + chr6_1:97523809-97523828 Msa0901190:intron 45.0%
GTGCCGAAGATGAAGAAACT+GGG + chr6_1:97523810-97523829 Msa0901190:intron 45.0%
TGCCGAAGATGAAGAAACTG+GGG + chr6_1:97523811-97523830 Msa0901190:three_prime_UTR 45.0%
TGTACTTTCTCCGAAGCATG+TGG + chr6_1:97523871-97523890 Msa0901190:three_prime_UTR 45.0%
TTGCTCCATACAAGAAGGTC+CGG + chr6_1:97524032-97524051 Msa0901190:three_prime_UTR 45.0%
TCTTCACCGACAAGATACCA+AGG + chr6_1:97524062-97524081 Msa0901190:three_prime_UTR 45.0%
AAGATACCAAGGTCTCCGAT+TGG + chr6_1:97524073-97524092 Msa0901190:three_prime_UTR 45.0%
AGATACCAAGGTCTCCGATT+GGG + chr6_1:97524074-97524093 Msa0901190:three_prime_UTR 45.0%
TTTCGGAGGATCTTCCCAAT+CGG - chr6_1:97524091-97524110 None:intergenic 45.0%
!!! TGATATTTTAAAAAAATTAA+AGG - chr6_1:97511437-97511456 None:intergenic 5.0%
!! ATATATATATATATATATAG+GGG + chr6_1:97511530-97511549 Msa0901190:intron 5.0%
!! TATATATATATATATATATG+GGG - chr6_1:97511517-97511536 None:intergenic 5.0%
!! ATTATAAAAAATAAAATTTG+TGG - chr6_1:97511934-97511953 None:intergenic 5.0%
!! ATTATAAGATAATTATATAA+AGG + chr6_1:97514868-97514887 Msa0901190:intron 5.0%
!!! TTTAAATAGTTTTATATAAA+AGG - chr6_1:97515548-97515567 None:intergenic 5.0%
!!! ATTTTTAAATAGTTTTTATT+AGG - chr6_1:97515577-97515596 None:intergenic 5.0%
!!! AAATAATTTTTTTTTTATTG+GGG - chr6_1:97517063-97517082 None:intergenic 5.0%
!!! GAAATAATTTTTTTTTTATT+GGG - chr6_1:97517064-97517083 None:intergenic 5.0%
!!! TGAAATAATTTTTTTTTTAT+TGG - chr6_1:97517065-97517084 None:intergenic 5.0%
!!! TATGTTTTAATTTAAATTTA+TGG + chr6_1:97517598-97517617 Msa0901190:intron 5.0%
!!! ATTTTTTTTAACAAATTAAA+AGG + chr6_1:97522072-97522091 Msa0901190:intron 5.0%
CAGAGTCTCACACACAACTC+TGG - chr6_1:97509708-97509727 None:intergenic 50.0%
ACCTGCACACCCTGAACTTT+AGG + chr6_1:97510273-97510292 Msa0901190:intron 50.0%
TCCTAAAGTTCAGGGTGTGC+AGG - chr6_1:97510277-97510296 None:intergenic 50.0%
CTTGCAAGCTGAAGTCTGTG+AGG - chr6_1:97512205-97512224 None:intergenic 50.0%
TGCCCTGAGGACAATGGTTA+AGG - chr6_1:97515222-97515241 None:intergenic 50.0%
!! TGTGGTGCTGTCAACGTTAG+TGG + chr6_1:97515346-97515365 Msa0901190:intron 50.0%
!! GTGGTGCTGTCAACGTTAGT+GGG + chr6_1:97515347-97515366 Msa0901190:intron 50.0%
TACGAGGATGTGCTAGCTAG+TGG + chr6_1:97515639-97515658 Msa0901190:intron 50.0%
TGTGCTAGCTAGTGGAGTGT+AGG + chr6_1:97515647-97515666 Msa0901190:intron 50.0%
AGTGGAGTGTAGGCCAAAAG+TGG + chr6_1:97515657-97515676 Msa0901190:intron 50.0%
!! TGGTGTTGCCTTGCTACATC+TGG + chr6_1:97515808-97515827 Msa0901190:intron 50.0%
TTGCCTTGCTACATCTGGCA+GGG + chr6_1:97515813-97515832 Msa0901190:intron 50.0%
TACATCTGGCAGGGTAGCTA+AGG + chr6_1:97515822-97515841 Msa0901190:intron 50.0%
CTGAACCGGTGTGACAGTTA+CGG + chr6_1:97515984-97516003 Msa0901190:intron 50.0%
CGTGTATTATAGCCGACGAC+AGG + chr6_1:97516291-97516310 Msa0901190:intron 50.0%
TCATGTGCACGTCGTGTAGT+AGG - chr6_1:97516320-97516339 None:intergenic 50.0%
TACACGACGTGCACATGACA+CGG + chr6_1:97516322-97516341 Msa0901190:intron 50.0%
GGCGTTTACGTTTGAGGAAG+AGG - chr6_1:97517090-97517109 None:intergenic 50.0%
CTGATGAGCAGCGATGGAAT+CGG - chr6_1:97517160-97517179 None:intergenic 50.0%
TGATGACTGATGAGCAGCGA+TGG - chr6_1:97517166-97517185 None:intergenic 50.0%
GTGATGAGCAGCTGTGGAAT+CGG - chr6_1:97517211-97517230 None:intergenic 50.0%
! ATGTCGTTGCCGTGATGGAA+TGG - chr6_1:97517257-97517276 None:intergenic 50.0%
GGTGTGAAGGAAGGAGAAGA+AGG - chr6_1:97517307-97517326 None:intergenic 50.0%
!! CAGGGATTTGGTGTGAAGGA+AGG - chr6_1:97517316-97517335 None:intergenic 50.0%
! GGTGGGCATTTTTCTCGCTT+AGG - chr6_1:97517801-97517820 None:intergenic 50.0%
CGCAAAGCTACAGCTATTGG+AGG + chr6_1:97517851-97517870 Msa0901190:CDS 50.0%
CAGTGTTACCCGCAACTACT+TGG + chr6_1:97517890-97517909 Msa0901190:CDS 50.0%
! ACTTGTTGACTGCACTGCCT+TGG + chr6_1:97517913-97517932 Msa0901190:CDS 50.0%
! CTTGTTGACTGCACTGCCTT+GGG + chr6_1:97517914-97517933 Msa0901190:CDS 50.0%
! TTGTTGACTGCACTGCCTTG+GGG + chr6_1:97517915-97517934 Msa0901190:CDS 50.0%
GGGCTAAAACCCCATCATGA+GGG - chr6_1:97520157-97520176 None:intergenic 50.0%
AGGGCTAAAACCCCATCATG+AGG - chr6_1:97520158-97520177 None:intergenic 50.0%
GGTTTATCGCTCTTTGCTGC+GGG + chr6_1:97520776-97520795 Msa0901190:three_prime_UTR 50.0%
TGCTGCGGGATTATTGTCGT+TGG + chr6_1:97520790-97520809 Msa0901190:three_prime_UTR 50.0%
GCTGCGGGATTATTGTCGTT+GGG + chr6_1:97520791-97520810 Msa0901190:three_prime_UTR 50.0%
GACAACATCGGTGGAACAAC+AGG - chr6_1:97520896-97520915 None:intergenic 50.0%
!! ACAACTCGATTCGGCTCGTT+AGG - chr6_1:97522129-97522148 None:intergenic 50.0%
GAGTCGAGCTCAGATGAGTT+CGG + chr6_1:97522243-97522262 Msa0901190:intron 50.0%
AATGACTGAGTCGACTGCAG+TGG + chr6_1:97522512-97522531 Msa0901190:three_prime_UTR 50.0%
ATGACTGAGTCGACTGCAGT+GGG + chr6_1:97522513-97522532 Msa0901190:three_prime_UTR 50.0%
!! AGGGTTGTTGGCTCCAAACA+CGG + chr6_1:97522581-97522600 Msa0901190:three_prime_UTR 50.0%
TCCAAACACGGAGGCAAAAG+TGG + chr6_1:97522593-97522612 Msa0901190:three_prime_UTR 50.0%
!! ACCACTTTTGCCTCCGTGTT+TGG - chr6_1:97522597-97522616 None:intergenic 50.0%
CAGTGGTGTGACTAACGTTC+AGG - chr6_1:97522819-97522838 None:intergenic 50.0%
!! ACGGCTGCATCGACTATTTC+AGG - chr6_1:97523652-97523671 None:intergenic 50.0%
GGTCGATTATGTTGCTGAGC+AGG + chr6_1:97523892-97523911 Msa0901190:three_prime_UTR 50.0%
GCAGGTTGCTCCATACAAGA+AGG + chr6_1:97524027-97524046 Msa0901190:intron 50.0%
TCCATACAAGAAGGTCCGGA+AGG + chr6_1:97524036-97524055 Msa0901190:three_prime_UTR 50.0%
ACCTTCCGGACCTTCTTGTA+TGG - chr6_1:97524040-97524059 None:intergenic 50.0%
TGTCGGTGAAGAACACCTTC+CGG - chr6_1:97524054-97524073 None:intergenic 50.0%
CGGAGACCTTGGTATCTTGT+CGG - chr6_1:97524071-97524090 None:intergenic 50.0%
ATCTTCCCAATCGGAGACCT+TGG - chr6_1:97524082-97524101 None:intergenic 50.0%
! AGCAATGCCTGAGCTGCTTT+CGG - chr6_1:97524108-97524127 None:intergenic 50.0%
GTACGGGGCAGAGTAATTGA+TGG - chr6_1:97524396-97524415 None:intergenic 50.0%
GCGGATCCAGTGTGCAATGA+GGG + chr6_1:97510245-97510264 Msa0901190:intron 55.0%
TGCACACCCTCATTGCACAC+TGG - chr6_1:97510254-97510273 None:intergenic 55.0%
! TATTTTGCACCCCCTGACCC+AGG + chr6_1:97511235-97511254 Msa0901190:intron 55.0%
! ATTTTGCACCCCCTGACCCA+GGG + chr6_1:97511236-97511255 Msa0901190:intron 55.0%
! AACCAGTGCCCTAAGGGCAT+TGG + chr6_1:97514899-97514918 Msa0901190:intron 55.0%
AACCAATGCCCTTAGGGCAC+TGG - chr6_1:97514904-97514923 None:intergenic 55.0%
AACCATTGTCCTCAGGGCAC+TGG + chr6_1:97515223-97515242 Msa0901190:intron 55.0%
AACCAGTGCCCTGAGGACAA+TGG - chr6_1:97515228-97515247 None:intergenic 55.0%
TCTTGCTAACCAGTGCCCTG+AGG - chr6_1:97515235-97515254 None:intergenic 55.0%
GTTGCCTTGCTACATCTGGC+AGG + chr6_1:97515812-97515831 Msa0901190:intron 55.0%
CTACCCTGCCAGATGTAGCA+AGG - chr6_1:97515819-97515838 None:intergenic 55.0%
GGTTCAGTCAACCCGTGCAT+CGG - chr6_1:97515971-97515990 None:intergenic 55.0%
! GATGCACGGGTTGACTGAAC+CGG + chr6_1:97515970-97515989 Msa0901190:intron 55.0%
! TTTTCCACCCGTGCATCGCA+CGG - chr6_1:97516208-97516227 None:intergenic 55.0%
TGCGATGCACGGGTGGAAAA+CGG + chr6_1:97516208-97516227 Msa0901190:intron 55.0%
TGTAGTAGGTGGCCTGTCGT+CGG - chr6_1:97516306-97516325 None:intergenic 55.0%
TGTGCACGTCGTGTAGTAGG+TGG - chr6_1:97516317-97516336 None:intergenic 55.0%
AGCAGCGGCGTTTACGTTTG+AGG - chr6_1:97517096-97517115 None:intergenic 55.0%
ATCGGTGATGAGCAGAGCAG+CGG - chr6_1:97517111-97517130 None:intergenic 55.0%
GAATCGGTGATGAGCAGCTG+TGG - chr6_1:97517217-97517236 None:intergenic 55.0%
CACTGCCTTGGGGTGAATAC+AGG + chr6_1:97517925-97517944 Msa0901190:CDS 55.0%
AACGCAGTCCCCCTAGAACA+AGG + chr6_1:97518012-97518031 Msa0901190:intron 55.0%
AGCTTGTGAGCTACTCGCTC+CGG + chr6_1:97519055-97519074 Msa0901190:three_prime_UTR 55.0%
AGGCTGTGGCTTGAGTGTGA+AGG - chr6_1:97519853-97519872 None:intergenic 55.0%
CTCAACACCCTCACCCTCAT+TGG + chr6_1:97520036-97520055 Msa0901190:three_prime_UTR 55.0%
GGGACTACAGGTGTGAGCAA+AGG + chr6_1:97520626-97520645 Msa0901190:three_prime_UTR 55.0%
GTCAATGCCGACAACATCGG+TGG - chr6_1:97520905-97520924 None:intergenic 55.0%
! GGTGCAGCGCTTTTGAGCAT+AGG + chr6_1:97520983-97521002 Msa0901190:three_prime_UTR 55.0%
!! GTTGTTGGCTCCAAACACGG+AGG + chr6_1:97522584-97522603 Msa0901190:three_prime_UTR 55.0%
CGGAGGCAAAAGTGGTAGAC+TGG + chr6_1:97522601-97522620 Msa0901190:three_prime_UTR 55.0%
! TGCGGTGAGCTTTGGTTGAG+AGG + chr6_1:97522654-97522673 Msa0901190:three_prime_UTR 55.0%
! GCGGTGAGCTTTGGTTGAGA+GGG + chr6_1:97522655-97522674 Msa0901190:three_prime_UTR 55.0%
AGATCCTCCGAAAGCAGCTC+AGG + chr6_1:97524098-97524117 Msa0901190:three_prime_UTR 55.0%
! AATGCCTGAGCTGCTTTCGG+AGG - chr6_1:97524105-97524124 None:intergenic 55.0%
CGCTGATCGCGCTGTCCTTA+AGG + chr6_1:97509576-97509595 Msa0901190:CDS 60.0%
GGCGGATCCAGTGTGCAATG+AGG + chr6_1:97510244-97510263 Msa0901190:intron 60.0%
TATCCAGGACCCTGGGTCAG+GGG - chr6_1:97511248-97511267 None:intergenic 60.0%
GTATCCAGGACCCTGGGTCA+GGG - chr6_1:97511249-97511268 None:intergenic 60.0%
AGTGGCGTATCCAGGACCCT+GGG - chr6_1:97511255-97511274 None:intergenic 60.0%
! GTGTAACCCGTGCCGATGCA+CGG + chr6_1:97515956-97515975 Msa0901190:intron 60.0%
! TGTAACCCGTGCCGATGCAC+GGG + chr6_1:97515957-97515976 Msa0901190:intron 60.0%
! AGTCAACCCGTGCATCGGCA+CGG - chr6_1:97515966-97515985 None:intergenic 60.0%
TGTTCTGCCCGTGCGATGCA+CGG + chr6_1:97516197-97516216 Msa0901190:intron 60.0%
TTTCCACCCGTGCATCGCAC+GGG - chr6_1:97516207-97516226 None:intergenic 60.0%
CGGTGATGTCGTTGCCGTGA+TGG - chr6_1:97517262-97517281 None:intergenic 60.0%
TCGACTGCAGTGGGAACACG+TGG + chr6_1:97522522-97522541 Msa0901190:three_prime_UTR 60.0%
! TTTTTGCCCCCAGGCAGCTG+CGG + chr6_1:97522636-97522655 Msa0901190:three_prime_UTR 60.0%
AAAGCTCACCGCAGCTGCCT+GGG - chr6_1:97522647-97522666 None:intergenic 60.0%
ATCCAGGACCCTGGGTCAGG+GGG - chr6_1:97511247-97511266 None:intergenic 65.0%
CGTATCCAGGACCCTGGGTC+AGG - chr6_1:97511250-97511269 None:intergenic 65.0%
CAGTGGCGTATCCAGGACCC+TGG - chr6_1:97511256-97511275 None:intergenic 65.0%
! GTCAACCCGTGCATCGGCAC+GGG - chr6_1:97515965-97515984 None:intergenic 65.0%
GTTCTGCCCGTGCGATGCAC+GGG + chr6_1:97516198-97516217 Msa0901190:intron 65.0%
GGGGGACTGCGTTCTCCATG+AGG - chr6_1:97518005-97518024 None:intergenic 65.0%
AAGCTCACCGCAGCTGCCTG+GGG - chr6_1:97522646-97522665 None:intergenic 65.0%
CAAAGCTCACCGCAGCTGCC+TGG - chr6_1:97522648-97522667 None:intergenic 65.0%
CAGGCAGCTGCGGTGAGCTT+TGG + chr6_1:97522646-97522665 Msa0901190:three_prime_UTR 65.0%
AGCTCACCGCAGCTGCCTGG+GGG - chr6_1:97522645-97522664 None:intergenic 70.0%
CACCCCCTGACCCAGGGTCC+TGG + chr6_1:97511242-97511261 Msa0901190:intron 75.0%
CTGCCCGTGCGATGCACGGG+TGG + chr6_1:97516201-97516220 Msa0901190:intron 75.0%
Chromosome Type Strat End Strand Name
chr6_1 gene 97509559 97524726 97509559 ID=Msa0901190;Name=Msa0901190
chr6_1 mRNA 97509559 97524726 97509559 ID=Msa0901190-mRNA-1;Parent=Msa0901190;Name=Msa0901190-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|0.85|0.87|0.87|1|0.87|8|3892|137
chr6_1 exon 97509559 97509607 97509559 ID=Msa0901190-mRNA-1:exon:17140;Parent=Msa0901190-mRNA-1
chr6_1 exon 97517775 97517946 97517775 ID=Msa0901190-mRNA-1:exon:17141;Parent=Msa0901190-mRNA-1
chr6_1 exon 97518173 97521054 97518173 ID=Msa0901190-mRNA-1:exon:17142;Parent=Msa0901190-mRNA-1
chr6_1 exon 97522504 97522693 97522504 ID=Msa0901190-mRNA-1:exon:17143;Parent=Msa0901190-mRNA-1
chr6_1 exon 97523353 97523498 97523353 ID=Msa0901190-mRNA-1:exon:17144;Parent=Msa0901190-mRNA-1
chr6_1 exon 97523610 97523677 97523610 ID=Msa0901190-mRNA-1:exon:17145;Parent=Msa0901190-mRNA-1
chr6_1 exon 97523811 97523913 97523811 ID=Msa0901190-mRNA-1:exon:17146;Parent=Msa0901190-mRNA-1
chr6_1 exon 97524031 97524726 97524031 ID=Msa0901190-mRNA-1:exon:17147;Parent=Msa0901190-mRNA-1
chr6_1 CDS 97509559 97509607 97509559 ID=Msa0901190-mRNA-1:cds;Parent=Msa0901190-mRNA-1
chr6_1 CDS 97517775 97517946 97517775 ID=Msa0901190-mRNA-1:cds;Parent=Msa0901190-mRNA-1
chr6_1 CDS 97518173 97518365 97518173 ID=Msa0901190-mRNA-1:cds;Parent=Msa0901190-mRNA-1
chr6_1 three_prime_UTR 97518366 97521054 97518366 ID=Msa0901190-mRNA-1:three_prime_utr;Parent=Msa0901190-mRNA-1
chr6_1 three_prime_UTR 97522504 97522693 97522504 ID=Msa0901190-mRNA-1:three_prime_utr;Parent=Msa0901190-mRNA-1
chr6_1 three_prime_UTR 97523353 97523498 97523353 ID=Msa0901190-mRNA-1:three_prime_utr;Parent=Msa0901190-mRNA-1
chr6_1 three_prime_UTR 97523610 97523677 97523610 ID=Msa0901190-mRNA-1:three_prime_utr;Parent=Msa0901190-mRNA-1
chr6_1 three_prime_UTR 97523811 97523913 97523811 ID=Msa0901190-mRNA-1:three_prime_utr;Parent=Msa0901190-mRNA-1
chr6_1 three_prime_UTR 97524031 97524726 97524031 ID=Msa0901190-mRNA-1:three_prime_utr;Parent=Msa0901190-mRNA-1
Gene Sequence

>Msa0901190

ATGAATAGTCTGAGACGCGCTGATCGCGCTGTCCTTAAGGATTTTTCACGTAAATTCAGGGAAAGGATTGAACCTAAGCGAGAAAAATGCCCACCTCATGTATTACAAGTTATAGACGATGAACTCGCAAAGCTACAGCTATTGGAGGCTAGTTCTAGTGAATTCAGTGTTACCCGCAACTACTTGGACTTGTTGACTGCACTGCCTTGGGGTGAATACAGTGATGAGAACTTTCATGTTACTCGGGCACAAAAAATTCTTGATGAAGACCATTATGGATTAACTGATGTGAAGGAAAGAATATTGGAATTCATAGCTGTTGGGAAATTGAGAGGGACTTCACAAGGTAACTACAATCACTTATGTATTGTACCTCAGTATTGTACCTCAGTTTTTCACGTTAGTGCACCATAA
Protein sequence

>Msa0901190

MNSLRRADRAVLKDFSRKFRERIEPKREKCPPHVLQVIDDELAKLQLLEASSSEFSVTRNYLDLLTALPWGEYSDENFHVTRAQKILDEDHYGLTDVKERILEFIAVGKLRGTSQGNYNHLCIVPQYCTSVFHVSAP*