AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0925990

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0925990 MtrunA17_Chr1g0192761 95.192 104 5 0 8 111 356 459 5.72e-63 206
Msa0925990 MtrunA17_Chr4g0055151 41.667 96 53 2 25 119 315 408 1.23e-15 72.0
Msa0925990 MtrunA17_Chr5g0400081 39.175 97 55 3 25 119 310 404 3.55e-12 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0925990 AT5G26860.1 82.000 100 18 0 12 111 403 502 5.99e-51 173
Msa0925990 AT3G05790.2 77.000 100 23 0 13 112 340 439 1.11e-46 161
Msa0925990 AT3G05790.1 77.000 100 23 0 13 112 351 450 1.43e-46 160
Msa0925990 AT3G05780.1 64.423 104 37 0 8 111 337 440 4.50e-40 142
Msa0925990 AT3G05775.1 56.250 80 34 1 13 92 18 96 7.35e-28 100
Msa0925990 AT5G47040.1 36.458 96 58 2 25 119 314 407 6.81e-13 64.7

Find 228 sgRNAs with CRISPR-Local

Find 406 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATTAAATGCATAAATATTA+TGG 0.124152 6_2:+69520621 Msa0925990:three_prime_UTR
GGCTTCTGCTTTACACAAAA+TGG 0.138296 6_2:+69521478 Msa0925990:three_prime_UTR
CTATTGGCTGTTCTGTATTT+AGG 0.170770 6_2:+69521563 Msa0925990:three_prime_UTR
TTGACATTGATGAGGTTATT+AGG 0.176901 6_2:+69522077 Msa0925990:three_prime_UTR
ACAGGGTAATAAATTGAATT+TGG 0.183276 6_2:-69521536 None:intergenic
ATATGACCAATAATGAATTT+TGG 0.185466 6_2:+69520782 Msa0925990:three_prime_UTR
GCCCTTATTGATTCTTCATC+TGG 0.217618 6_2:+69521410 Msa0925990:three_prime_UTR
TAATCATAATGTTGGGGATT+TGG 0.219662 6_2:-69521005 None:intergenic
GGAGTTTGATTAAAAGAGTT+TGG 0.228239 6_2:-69520696 None:intergenic
TGTTGGGGATTTGGAATATT+TGG 0.231225 6_2:-69520996 None:intergenic
ATTCTTGATGAAGACCATTA+TGG 0.236955 6_2:+69519449 Msa0925990:CDS
TATCAAATACAAGGGATTTC+AGG 0.243292 6_2:+69524703 Msa0925990:three_prime_UTR
GTTGAGTGATCATGTTGTTT+TGG 0.245364 6_2:-69521256 None:intergenic
CGCCATGTATTGTCTTTCTT+TGG 0.245550 6_2:-69525403 None:intergenic
TAATATCCAAAATTCATTAT+TGG 0.251066 6_2:-69520788 None:intergenic
TCATAGAAATCTTATTTCTA+TGG 0.256021 6_2:+69521898 Msa0925990:three_prime_UTR
ATGCATCTAATATATGTTAT+AGG 0.261609 6_2:-69520377 None:intergenic
TAAAATAGTGAAATAGAAAA+AGG 0.264279 6_2:-69521125 None:intergenic
AATTAATGTATTCTAGAGTT+TGG 0.264466 6_2:-69520584 None:intergenic
AGTGCCGAAGATGAAGAAAT+TGG 0.267741 6_2:+69525035 Msa0925990:intron
ACGGCTGCATCGACTATTTC+AGG 0.272026 6_2:-69524875 None:intergenic
AAATTTCCAACCCTATTCTT+AGG 0.276628 6_2:+69520937 Msa0925990:three_prime_UTR
CTTGTTGACTGCACTGCCTT+GGG 0.278819 6_2:+69519156 Msa0925990:CDS
TTGATTGAAATTAATGTGTT+AGG 0.279691 6_2:-69520253 None:intergenic
GGGTCAGTTGGAAGATTTCT+AGG 0.289970 6_2:-69521335 None:intergenic
ATTCACAACTATTCGTCAAT+AGG 0.296417 6_2:+69523787 Msa0925990:three_prime_UTR
ATGAAGGCAAAGGGTGTTAA+TGG 0.303488 6_2:+69522163 Msa0925990:three_prime_UTR
TTATTACCCTGTTATACTAT+TGG 0.314296 6_2:+69521547 Msa0925990:three_prime_UTR
TGGAAATTTCTGTACGCATT+TGG 0.315063 6_2:-69520923 None:intergenic
AATATTTGGTGTGAAGAAAA+AGG 0.315910 6_2:-69520982 None:intergenic
AGAACAGCCAATAGTATAAC+AGG 0.320104 6_2:-69521554 None:intergenic
TGACATTGATGAGGTTATTA+GGG 0.322063 6_2:+69522078 Msa0925990:three_prime_UTR
CAGGCAGCTGCGGTGAGCTT+TGG 0.328932 6_2:+69523872 Msa0925990:three_prime_UTR
GGAACGTAATAGCTACGTTT+AGG 0.330578 6_2:-69521033 None:intergenic
CAAAGCTCACCGCAGCTGCC+TGG 0.332403 6_2:-69523871 None:intergenic
TTGTGCCGATGAGGTATTCT+TGG 0.339517 6_2:-69520009 None:intergenic
GTTGAATAAGTGAGGTGTTC+GGG 0.341422 6_2:-69519756 None:intergenic
TTGCCAATGTTTCATGTGTA+TGG 0.342668 6_2:+69521992 Msa0925990:three_prime_UTR
ATTAAATGCATAAATATTAT+GGG 0.343088 6_2:+69520622 Msa0925990:three_prime_UTR
AATGTGCAGAATAGAAATTT+TGG 0.344789 6_2:-69525531 None:intergenic
TAAAATATGAGTAACTCTTT+AGG 0.348968 6_2:+69520719 Msa0925990:three_prime_UTR
ACCCAGATGAAGAATCAATA+AGG 0.350199 6_2:-69521412 None:intergenic
GGTTATAAAGATTGAAACTT+TGG 0.354265 6_2:-69521151 None:intergenic
CAGTGTTACCCGTAACTACT+TGG 0.360213 6_2:+69519132 Msa0925990:CDS
AAGGGTGAAATTGTCTTTGT+TGG 0.360994 6_2:-69520963 None:intergenic
GGGACTATAATCATAATGTT+GGG 0.361470 6_2:-69521012 None:intergenic
AGTCCACCAATTTCATGTTA+TGG 0.362444 6_2:-69525431 None:intergenic
TTCCCCAATTTCTTCATCTT+CGG 0.365786 6_2:-69525039 None:intergenic
TTCACTTGAAATCTTTGATA+AGG 0.367611 6_2:+69525825 Msa0925990:three_prime_UTR
TTGGGTCATATTAACTTGTA+TGG 0.368545 6_2:-69520677 None:intergenic
AAAGCTCACCGCAGCTGCCT+GGG 0.370228 6_2:-69523870 None:intergenic
TGATGTGAAGGAAAGAATAT+TGG 0.374667 6_2:+69519478 Msa0925990:CDS
ACCTGTATAAAATCAACGTT+AGG 0.376743 6_2:-69522271 None:intergenic
CACTAATAACAGAATCATTC+AGG 0.378618 6_2:+69525922 Msa0925990:three_prime_UTR
ACTTGTTGACTGCACTGCCT+TGG 0.381035 6_2:+69519155 Msa0925990:CDS
AGCAATGCCTGAGCTGCTTT+CGG 0.384531 6_2:-69525331 None:intergenic
GGGTTACCATAACATGAAAT+TGG 0.385594 6_2:+69525425 Msa0925990:three_prime_UTR
AATTTAATTGGTGTGAGAAA+TGG 0.387416 6_2:-69519614 None:intergenic
GAACGTAATAGCTACGTTTA+GGG 0.387537 6_2:-69521032 None:intergenic
ATTTAATTGGTGTGAGAAAT+GGG 0.389468 6_2:-69519613 None:intergenic
CACTGCCTTGGGGTGAATAC+AGG 0.393770 6_2:+69519167 Msa0925990:CDS
GTGAGAAATGGGGTGCATTA+TGG 0.394728 6_2:-69519602 None:intergenic
GAGTTTGATTAAAAGAGTTT+GGG 0.395162 6_2:-69520695 None:intergenic
AGGGTGAAATTGTCTTTGTT+GGG 0.398587 6_2:-69520962 None:intergenic
TGCTGCGGGATTATTGTCGT+TGG 0.401502 6_2:+69522027 Msa0925990:three_prime_UTR
ACCTTCCGGACCTTCTTGTA+TGG 0.403187 6_2:-69525263 None:intergenic
ACTCGCAAAGCTACAGCTAT+TGG 0.405142 6_2:+69519090 Msa0925990:CDS
TTCACAACTATTCGTCAATA+GGG 0.405454 6_2:+69523788 Msa0925990:three_prime_UTR
ATTAAACAAAACCAAGGAAA+AGG 0.409840 6_2:-69520842 None:intergenic
GTGCCGAAGATGAAGAAATT+GGG 0.410455 6_2:+69525036 Msa0925990:intron
TGTTGTTCCACCGATGTTGT+CGG 0.411176 6_2:+69522132 Msa0925990:three_prime_UTR
TGTTGGCGAAATTCGTAAAC+AGG 0.412030 6_2:+69521619 Msa0925990:three_prime_UTR
AAGGAAACAATGTCAAGAAA+AGG 0.413052 6_2:-69521356 None:intergenic
CCCTTATTGATTCTTCATCT+GGG 0.414327 6_2:+69521411 Msa0925990:three_prime_UTR
TCAGGATGGATATTTACATT+TGG 0.418131 6_2:+69524661 Msa0925990:three_prime_UTR
TTTGTTGGGATCCTAAGAAT+AGG 0.418373 6_2:-69520948 None:intergenic
GTCAAGAAACTAGAGCTATT+AGG 0.418468 6_2:+69521686 Msa0925990:three_prime_UTR
TAACAAATTTGAGTAAGAAA+TGG 0.419251 6_2:-69521438 None:intergenic
TCAAAGGGTAGTTATTAAAC+AGG 0.419883 6_2:+69521811 Msa0925990:three_prime_UTR
AGTTGAATAAGTGAGGTGTT+CGG 0.421294 6_2:-69519757 None:intergenic
CTATTCGTCAATAGGGTTGT+TGG 0.424322 6_2:+69523795 Msa0925990:three_prime_UTR
GACAACATCGGTGGAACAAC+AGG 0.427365 6_2:-69522130 None:intergenic
TTGTTGGGATCCTAAGAATA+GGG 0.428757 6_2:-69520947 None:intergenic
TACGCATTTGGCTCTCAAGT+TGG 0.428976 6_2:-69520911 None:intergenic
TGTTTAATAACTACCCTTTG+AGG 0.430394 6_2:-69521809 None:intergenic
GGTTTATCGCTCTTTGCTGC+GGG 0.430597 6_2:+69522013 Msa0925990:three_prime_UTR
ACGCATTTGGCTCTCAAGTT+GGG 0.434343 6_2:-69520910 None:intergenic
AGGGACTATAATCATAATGT+TGG 0.443278 6_2:-69521013 None:intergenic
TCTAATATATGTTATAGGTT+AGG 0.443388 6_2:-69520372 None:intergenic
CAGAAAATGAGAAGGATTTG+AGG 0.445513 6_2:+69521735 Msa0925990:three_prime_UTR
GCTGCGGGATTATTGTCGTT+GGG 0.447735 6_2:+69522028 Msa0925990:three_prime_UTR
TCACATCAGTTAATCCATAA+TGG 0.447928 6_2:-69519463 None:intergenic
CTCAACACCCTCACCCTCAT+TGG 0.448612 6_2:+69521273 Msa0925990:three_prime_UTR
TGCGGTGAGCTTTGGTTGAG+AGG 0.454034 6_2:+69523880 Msa0925990:three_prime_UTR
TCAACAAGTCCAAGTAGTTA+CGG 0.455302 6_2:-69519141 None:intergenic
GCTTCTGCTTTACACAAAAT+GGG 0.455667 6_2:+69521479 Msa0925990:three_prime_UTR
CCCAGATGAAGAATCAATAA+GGG 0.467167 6_2:-69521411 None:intergenic
AAGATACCAAGGTCTCCAAT+TGG 0.468405 6_2:+69525299 Msa0925990:three_prime_UTR
AATCAAATTTACCATAAAGA+AGG 0.470429 6_2:-69521784 None:intergenic
CAACAAGTCCAAGTAGTTAC+GGG 0.471934 6_2:-69519140 None:intergenic
ATTGAAAAGTATGACACAAC+AGG 0.473687 6_2:-69525768 None:intergenic
AGACATCGTATATTATATAC+AGG 0.474844 6_2:+69519719 Msa0925990:three_prime_UTR
TTGCTTGACTTCTAAACTCT+AGG 0.476441 6_2:+69525349 Msa0925990:three_prime_UTR
AAGCTCACCGCAGCTGCCTG+GGG 0.478646 6_2:-69523869 None:intergenic
ATCTTCCCAATTGGAGACCT+TGG 0.482728 6_2:-69525305 None:intergenic
TTTCGGAGGATCTTCCCAAT+TGG 0.484373 6_2:-69525314 None:intergenic
TAAATTTGATTTGCCTCAAA+GGG 0.485047 6_2:+69521796 Msa0925990:three_prime_UTR
GCATTTGTTGTCAAGAAGGT+TGG 0.486407 6_2:+69525071 Msa0925990:three_prime_UTR
GTAAATTTGATTTGCCTCAA+AGG 0.487083 6_2:+69521795 Msa0925990:three_prime_UTR
ACATAATCGACCACATGCTT+CGG 0.487322 6_2:-69525107 None:intergenic
ATTTCGCCAACACTACTAAG+AGG 0.489624 6_2:-69521608 None:intergenic
TATTGGAATTCATAGCTGTT+GGG 0.491082 6_2:+69519495 Msa0925990:CDS
ATGAGAACTTTCATGTTACT+CGG 0.494833 6_2:+69519417 Msa0925990:CDS
TTGTATTCACCTGGGACTAC+AGG 0.497359 6_2:+69521851 Msa0925990:three_prime_UTR
AGATACCAAGGTCTCCAATT+GGG 0.497622 6_2:+69525300 Msa0925990:three_prime_UTR
ATAACTGACTAAAGGTGTAC+GGG 0.498241 6_2:-69525634 None:intergenic
AACACAGCTTCTAGATCAGC+AGG 0.500308 6_2:-69524842 None:intergenic
GTACGGGGCAGAGTAATTGA+TGG 0.500362 6_2:-69525618 None:intergenic
TGGAGACCTTGGTATCTTGT+CGG 0.500628 6_2:-69525294 None:intergenic
TTCTTGACAACAAATGCGAC+TGG 0.501806 6_2:-69525065 None:intergenic
CGCAAAGCTACAGCTATTGG+AGG 0.501833 6_2:+69519093 Msa0925990:CDS
AGATCCTCCGAAAGCAGCTC+AGG 0.501984 6_2:+69525324 Msa0925990:three_prime_UTR
CACAAAATGGGTGTTTCACA+AGG 0.502968 6_2:+69521491 Msa0925990:three_prime_UTR
TTTCAGGTAAATTCAGGGAA+AGG 0.503118 6_2:+69519011 Msa0925990:intron
TGCTTATAATAGTGATCGGA+TGG 0.505461 6_2:+69520432 Msa0925990:three_prime_UTR
TTAAACAAAACCAAGGAAAA+GGG 0.505625 6_2:-69520841 None:intergenic
TGGTTTATCGCTCTTTGCTG+CGG 0.507976 6_2:+69522012 Msa0925990:three_prime_UTR
ATTTCTCTAGTGCATTTACA+AGG 0.509552 6_2:-69525667 None:intergenic
TGTCGGTGAAGAACACCTTC+CGG 0.510625 6_2:-69525277 None:intergenic
GTGGAAATGGGGATATGAAA+AGG 0.511114 6_2:-69521054 None:intergenic
TAAGTTGCAGAGTTTGAGAC+AGG 0.511530 6_2:+69522189 Msa0925990:three_prime_UTR
AGTCGCATTTGTTGTCAAGA+AGG 0.514135 6_2:+69525067 Msa0925990:three_prime_UTR
TTGCTCCATACAAGAAGGTC+CGG 0.515213 6_2:+69525258 Msa0925990:three_prime_UTR
GATGAAAGACTCTAATTGAA+AGG 0.515310 6_2:-69520536 None:intergenic
CGGAGGCAAAAGTGGTAGAC+TGG 0.515561 6_2:+69523827 Msa0925990:three_prime_UTR
GCGGTGAGCTTTGGTTGAGA+GGG 0.517348 6_2:+69523881 Msa0925990:three_prime_UTR
TTGAATCCTCTTAGTAGTGT+TGG 0.520706 6_2:+69521602 Msa0925990:three_prime_UTR
AGGAAACAATGTCAAGAAAA+GGG 0.521407 6_2:-69521355 None:intergenic
TTTGTCTTTATCATGTGTGC+GGG 0.521901 6_2:+69520867 Msa0925990:three_prime_UTR
ATATTGGAATTCATAGCTGT+TGG 0.524360 6_2:+69519494 Msa0925990:CDS
TATAACTGACTAAAGGTGTA+CGG 0.525204 6_2:-69525635 None:intergenic
TGGGATCCTAAGAATAGGGT+TGG 0.527873 6_2:-69520943 None:intergenic
AGCTTGTGAGCTACTCGCTC+CGG 0.529410 6_2:+69520297 Msa0925990:three_prime_UTR
CAACATTGTACATCTAATGA+TGG 0.532341 6_2:+69518876 Msa0925990:CDS
ATGTCAAGAAAAGGGTCAGT+TGG 0.533509 6_2:-69521347 None:intergenic
AAACCATACACATGAAACAT+TGG 0.533547 6_2:-69521995 None:intergenic
TCCAAACACGGAGGCAAAAG+TGG 0.534472 6_2:+69523819 Msa0925990:three_prime_UTR
GTTACCTTTAGTCAAATCCA+TGG 0.536077 6_2:+69521457 Msa0925990:three_prime_UTR
GAAGCCATGGATTTGACTAA+AGG 0.537715 6_2:-69521461 None:intergenic
ATATCAACAATTGATAAAGA+TGG 0.537763 6_2:+69524605 Msa0925990:three_prime_UTR
AAAGATGGTTGGTTACATAC+AGG 0.537881 6_2:+69524620 Msa0925990:three_prime_UTR
AAAGTGGTAGACTGGAACAA+TGG 0.541163 6_2:+69523835 Msa0925990:three_prime_UTR
CTCAGGATACTTGAATAATG+AGG 0.541417 6_2:+69524574 Msa0925990:intron
TTCATATACTTACGCTGTAA+CGG 0.543086 6_2:-69524894 None:intergenic
TGCTTGACTTCTAAACTCTA+GGG 0.545589 6_2:+69525350 Msa0925990:three_prime_UTR
ACACTACTAAGAGGATTCAA+TGG 0.545729 6_2:-69521599 None:intergenic
TTGCTCACACCTGTAGTCCC+AGG 0.547810 6_2:-69521860 None:intergenic
CTCTTACTATAACTGACTAA+AGG 0.548149 6_2:-69525642 None:intergenic
AATCAACGTTAGGGAAAGCA+TGG 0.550452 6_2:-69522261 None:intergenic
GAAAGACATTATCAAATACA+AGG 0.550958 6_2:+69524694 Msa0925990:three_prime_UTR
GGTCGATTATGTTGCTGAGC+AGG 0.550976 6_2:+69525118 Msa0925990:three_prime_UTR
CAACAATTGATAAAGATGGT+TGG 0.560181 6_2:+69524609 Msa0925990:three_prime_UTR
TTTGTGTAAAGCAGAAGCCA+TGG 0.560434 6_2:-69521474 None:intergenic
GCTGGTATATTGTATTCACC+TGG 0.561682 6_2:+69521842 Msa0925990:three_prime_UTR
CCTGTATAAAATCAACGTTA+GGG 0.562718 6_2:-69522270 None:intergenic
ATAACTTGTAATACATGAGG+TGG 0.565089 6_2:-69519058 None:intergenic
TACCAAAGAAAGACAATACA+TGG 0.567298 6_2:+69525401 Msa0925990:three_prime_UTR
TTATGGATTAACTGATGTGA+AGG 0.567534 6_2:+69519466 Msa0925990:CDS
GGCATTGACAATGAAGGCAA+AGG 0.569984 6_2:+69522153 Msa0925990:three_prime_UTR
GCATTGACAATGAAGGCAAA+GGG 0.570042 6_2:+69522154 Msa0925990:three_prime_UTR
ATTTAATGAATTTAAAACGT+GGG 0.575031 6_2:-69520339 None:intergenic
GAGGAAATTTGACATTGATG+AGG 0.576756 6_2:+69522069 Msa0925990:three_prime_UTR
TTGTTGACTGCACTGCCTTG+GGG 0.578541 6_2:+69519157 Msa0925990:CDS
AACAGCTAGAAACACACACT+TGG 0.579086 6_2:-69521969 None:intergenic
ATTGTCAATGCCGACAACAT+CGG 0.579863 6_2:-69522142 None:intergenic
GGACTATAATCATAATGTTG+GGG 0.580599 6_2:-69521011 None:intergenic
TCATTAGATGTACAATGTTG+AGG 0.582577 6_2:-69518873 None:intergenic
TTACCATAACATGAAATTGG+TGG 0.582902 6_2:+69525428 Msa0925990:three_prime_UTR
AAAGAAAGACAATACATGGC+GGG 0.585051 6_2:+69525405 Msa0925990:three_prime_UTR
TGCTGTGCCAGAAAATGAGA+AGG 0.586565 6_2:+69521727 Msa0925990:three_prime_UTR
AGGCTGTGGCTTGAGTGTGA+AGG 0.586939 6_2:-69521087 None:intergenic
ATAGCTGTTGGGAAATTGAG+AGG 0.587899 6_2:+69519506 Msa0925990:CDS
GTGGTGTAAAATGTTGAATG+TGG 0.591694 6_2:-69521172 None:intergenic
AGTTTGAGACAGGTCTCTTG+CGG 0.592614 6_2:+69522199 Msa0925990:three_prime_UTR
GATGAATACCAATGAGGGTG+AGG 0.592922 6_2:-69521281 None:intergenic
GTTGTCGGCATTGACAATGA+AGG 0.595731 6_2:+69522147 Msa0925990:three_prime_UTR
TAGCTGTTGGGAAATTGAGA+GGG 0.598517 6_2:+69519507 Msa0925990:CDS
AGGGCTAAAACCCCATCATG+AGG 0.601023 6_2:-69521392 None:intergenic
AATGCCTGAGCTGCTTTCGG+AGG 0.604997 6_2:-69525328 None:intergenic
AGCTCACCGCAGCTGCCTGG+GGG 0.606825 6_2:-69523868 None:intergenic
TGCCGAAGATGAAGAAATTG+GGG 0.607367 6_2:+69525037 Msa0925990:three_prime_UTR
ATTAAACAGGAAGATACTGC+TGG 0.608838 6_2:+69521824 Msa0925990:three_prime_UTR
CGTAAACAGGTTCAAGAGTG+TGG 0.611754 6_2:+69521632 Msa0925990:three_prime_UTR
AGGGTTGTTGGCTCCAAACA+CGG 0.614077 6_2:+69523807 Msa0925990:three_prime_UTR
AAAGACATTATCAAATACAA+GGG 0.615550 6_2:+69524695 Msa0925990:three_prime_UTR
GTCAATGCCGACAACATCGG+TGG 0.615987 6_2:-69522139 None:intergenic
GCTCTAAATTTGTGCCGATG+AGG 0.617021 6_2:-69520018 None:intergenic
AGAGGGCCTTCTATTATGAG+AGG 0.618979 6_2:+69523898 Msa0925990:three_prime_UTR
GCAGGTTGCTCCATACAAGA+AGG 0.622353 6_2:+69525253 Msa0925990:intron
TGAGAACTTTCATGTTACTC+GGG 0.622678 6_2:+69519418 Msa0925990:CDS
TCGACTGCAGTGGGAACACG+TGG 0.624008 6_2:+69523748 Msa0925990:three_prime_UTR
GCTCTACAGTCATTGTAATG+AGG 0.624765 6_2:+69522050 Msa0925990:three_prime_UTR
GGGACTACAGGTGTGAGCAA+AGG 0.627485 6_2:+69521863 Msa0925990:three_prime_UTR
ATGATTAAAAGACTCAGTTG+TGG 0.636753 6_2:-69519892 None:intergenic
CTGGTATATTGTATTCACCT+GGG 0.637409 6_2:+69521843 Msa0925990:three_prime_UTR
TCTATAACTTGTAATACATG+AGG 0.643498 6_2:-69519061 None:intergenic
AAATTGAGAGGGACTTCACA+AGG 0.643864 6_2:+69519518 Msa0925990:CDS
ATGACTGAGTCGACTGCAGT+GGG 0.649133 6_2:+69523739 Msa0925990:three_prime_UTR
TTTAATTGGTGTGAGAAATG+GGG 0.650895 6_2:-69519612 None:intergenic
TAACTTGTAATACATGAGGT+GGG 0.651379 6_2:-69519057 None:intergenic
GGGCTAAAACCCCATCATGA+GGG 0.653343 6_2:-69521391 None:intergenic
AATTTAATGAATTTAAAACG+TGG 0.657290 6_2:-69520340 None:intergenic
TCCATACAAGAAGGTCCGGA+AGG 0.659172 6_2:+69525262 Msa0925990:three_prime_UTR
AAAGGCCAAGAATACCTCAT+CGG 0.668814 6_2:+69520004 Msa0925990:three_prime_UTR
TGTACTTTCTCCGAAGCATG+TGG 0.668913 6_2:+69525097 Msa0925990:three_prime_UTR
AAAGCACTTAGAACAGACAA+AGG 0.669955 6_2:+69519986 Msa0925990:three_prime_UTR
CATCGTATATTATATACAGG+AGG 0.678692 6_2:+69519722 Msa0925990:three_prime_UTR
AATGACTGAGTCGACTGCAG+TGG 0.680151 6_2:+69523738 Msa0925990:three_prime_UTR
AAGAAACTAGAGCTATTAGG+TGG 0.680245 6_2:+69521689 Msa0925990:three_prime_UTR
ACAAACCTGTATTCACCCCA+AGG 0.685382 6_2:-69519172 None:intergenic
ATGAATACCAATGAGGGTGA+GGG 0.691317 6_2:-69521280 None:intergenic
AAAACTGAGGTACAATACTG+AGG 0.714758 6_2:-69519566 None:intergenic
GAACAGCCAATAGTATAACA+GGG 0.716419 6_2:-69521553 None:intergenic
TCTTCACCGACAAGATACCA+AGG 0.749835 6_2:+69525288 Msa0925990:three_prime_UTR
CAAAGAAAGACAATACATGG+CGG 0.750110 6_2:+69525404 Msa0925990:three_prime_UTR
TGTATTACAAGTTATAGACG+AGG 0.761642 6_2:+69519066 Msa0925990:CDS
TAACTGACTAAAGGTGTACG+GGG 0.771403 6_2:-69525633 None:intergenic
GTTGTTGGCTCCAAACACGG+AGG 0.795141 6_2:+69523810 Msa0925990:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CTTTAAAATGATTTTTTTTT+AGG - chr6_2:69520075-69520094 None:intergenic 10.0%
!! ATTAAATGCATAAATATTAT+GGG + chr6_2:69520622-69520641 Msa0925990:three_prime_UTR 10.0%
!! AATAAATACATTAATATTAG+AGG - chr6_2:69522973-69522992 None:intergenic 10.0%
!!! ATTAATGTATTTATTTTTAG+AGG + chr6_2:69522978-69522997 Msa0925990:intron 10.0%
!! GAAGAAAAAAATAAAATAAA+GGG - chr6_2:69525231-69525250 None:intergenic 10.0%
!! AGAAGAAAAAAATAAAATAA+AGG - chr6_2:69525232-69525251 None:intergenic 10.0%
!!! TTTATTTTATTTTTTTCTTC+TGG + chr6_2:69525231-69525250 Msa0925990:intron 10.0%
!!! TTAACTTTACTTTTTATTTC+AGG + chr6_2:69518995-69519014 Msa0925990:intron 15.0%
!! ACAAGATAATTGTATAAAAA+TGG - chr6_2:69519650-69519669 None:intergenic 15.0%
!!! TGTATTTTTACTATGTTTTT+TGG + chr6_2:69519842-69519861 Msa0925990:three_prime_UTR 15.0%
!!! ATTTAATGAATTTAAAACGT+GGG - chr6_2:69520342-69520361 None:intergenic 15.0%
!!! AATTTAATGAATTTAAAACG+TGG - chr6_2:69520343-69520362 None:intergenic 15.0%
!!! AAGTTTGTTTTGTAAAATTA+AGG - chr6_2:69520476-69520495 None:intergenic 15.0%
!!! TTTACAAAACAAACTTTTAA+TGG + chr6_2:69520480-69520499 Msa0925990:three_prime_UTR 15.0%
!! AACTTAAAAAGTTAGATAAT+AGG - chr6_2:69520511-69520530 None:intergenic 15.0%
!!! TATTTTGATAAATAGATAAG+AGG + chr6_2:69520559-69520578 Msa0925990:three_prime_UTR 15.0%
!! GATTAAATGCATAAATATTA+TGG + chr6_2:69520621-69520640 Msa0925990:three_prime_UTR 15.0%
!! TAATATCCAAAATTCATTAT+TGG - chr6_2:69520791-69520810 None:intergenic 15.0%
!! AAAATAGTGAAATAGAAAAA+GGG - chr6_2:69521127-69521146 None:intergenic 15.0%
!! TAAAATAGTGAAATAGAAAA+AGG - chr6_2:69521128-69521147 None:intergenic 15.0%
!!! TTATTTTTCTTTGTTATTGT+TGG + chr6_2:69522374-69522393 Msa0925990:intron 15.0%
!! AGATATTAAAAAGTAAAACA+CGG + chr6_2:69523945-69523964 Msa0925990:intron 15.0%
!!! GTTTGATTAACAATTTTAAT+TGG - chr6_2:69524540-69524559 None:intergenic 15.0%
!!! TTTTTATTTCAGGTAAATTC+AGG + chr6_2:69519005-69519024 Msa0925990:intron 20.0%
!!! TTTTATTTCAGGTAAATTCA+GGG + chr6_2:69519006-69519025 Msa0925990:intron 20.0%
!! GGAAAAACAATGAATTTAAT+TGG - chr6_2:69519629-69519648 None:intergenic 20.0%
!!! TTTTTTAAGTTGAATAAGTG+AGG - chr6_2:69519767-69519786 None:intergenic 20.0%
!!! ACTACAAGTCAAATTTTTTT+TGG - chr6_2:69519819-69519838 None:intergenic 20.0%
!!! ATTTTTACTATGTTTTTTGG+AGG + chr6_2:69519845-69519864 Msa0925990:three_prime_UTR 20.0%
!!! TTTTTACTATGTTTTTTGGA+GGG + chr6_2:69519846-69519865 Msa0925990:three_prime_UTR 20.0%
!! TTGATTGAAATTAATGTGTT+AGG - chr6_2:69520256-69520275 None:intergenic 20.0%
!!! TTTTTACTTATATTAGTCAC+CGG - chr6_2:69520319-69520338 None:intergenic 20.0%
!! TCTAATATATGTTATAGGTT+AGG - chr6_2:69520375-69520394 None:intergenic 20.0%
!! ATGCATCTAATATATGTTAT+AGG - chr6_2:69520380-69520399 None:intergenic 20.0%
!!! AATTAATGTATTCTAGAGTT+TGG - chr6_2:69520587-69520606 None:intergenic 20.0%
!!! TAAAGAGTTACTCATATTTT+AGG - chr6_2:69520720-69520739 None:intergenic 20.0%
!! TAAAATATGAGTAACTCTTT+AGG + chr6_2:69520719-69520738 Msa0925990:three_prime_UTR 20.0%
!!! TATTTTTGTGTGTGAAAAAA+AGG - chr6_2:69520765-69520784 None:intergenic 20.0%
!!! ATATGACCAATAATGAATTT+TGG + chr6_2:69520782-69520801 Msa0925990:three_prime_UTR 20.0%
!! CAAAAAATTAAACAAAACCA+AGG - chr6_2:69520851-69520870 None:intergenic 20.0%
!! TAACAAATTTGAGTAAGAAA+TGG - chr6_2:69521441-69521460 None:intergenic 20.0%
!!! AGTTTTTTTAACCTTCTTTA+TGG + chr6_2:69521773-69521792 Msa0925990:three_prime_UTR 20.0%
!! AATCAAATTTACCATAAAGA+AGG - chr6_2:69521787-69521806 None:intergenic 20.0%
!!! TCATAGAAATCTTATTTCTA+TGG + chr6_2:69521898-69521917 Msa0925990:three_prime_UTR 20.0%
!! ATTAAGACTATTCTATTCAA+AGG - chr6_2:69522303-69522322 None:intergenic 20.0%
!! TTTAATAGCAACTGTTATAT+AGG + chr6_2:69522455-69522474 Msa0925990:intron 20.0%
!! TTAATAGCAACTGTTATATA+GGG + chr6_2:69522456-69522475 Msa0925990:intron 20.0%
!! GATATTAAAAAGTAAAACAC+GGG + chr6_2:69523946-69523965 Msa0925990:intron 20.0%
!! TATAGAGCAAATATAGTAAA+GGG - chr6_2:69524101-69524120 None:intergenic 20.0%
!! ATATAGAGCAAATATAGTAA+AGG - chr6_2:69524102-69524121 None:intergenic 20.0%
!!! TCATTAACATTTTACTGATA+AGG - chr6_2:69524335-69524354 None:intergenic 20.0%
!! ATATCAACAATTGATAAAGA+TGG + chr6_2:69524605-69524624 Msa0925990:three_prime_UTR 20.0%
!!! AGATATTGTTTATTTTGATC+AGG + chr6_2:69524643-69524662 Msa0925990:three_prime_UTR 20.0%
!! AAAGACATTATCAAATACAA+GGG + chr6_2:69524695-69524714 Msa0925990:three_prime_UTR 20.0%
!!! TTAATACCTTATTTTTCTTC+AGG + chr6_2:69525861-69525880 Msa0925990:three_prime_UTR 20.0%
!!! ATCATTTGTTTTGATTACTT+GGG - chr6_2:69525898-69525917 None:intergenic 20.0%
!!! TATCATTTGTTTTGATTACT+TGG - chr6_2:69525899-69525918 None:intergenic 20.0%
!! TCTATAACTTGTAATACATG+AGG - chr6_2:69519064-69519083 None:intergenic 25.0%
!! TGCATAAGCATAATTTTCAT+AGG + chr6_2:69519311-69519330 Msa0925990:intron 25.0%
! ATTTAATTGGTGTGAGAAAT+GGG - chr6_2:69519616-69519635 None:intergenic 25.0%
! AATTTAATTGGTGTGAGAAA+TGG - chr6_2:69519617-69519636 None:intergenic 25.0%
! AGACATCGTATATTATATAC+AGG + chr6_2:69519719-69519738 Msa0925990:three_prime_UTR 25.0%
!!! TTTTTGGTAAAATAGTCTAG+TGG - chr6_2:69519803-69519822 None:intergenic 25.0%
!!! TTTTACTATGTTTTTTGGAG+GGG + chr6_2:69519847-69519866 Msa0925990:three_prime_UTR 25.0%
!! CTTTTGCTTATAATAGTGAT+CGG + chr6_2:69520428-69520447 Msa0925990:three_prime_UTR 25.0%
! GAGTTTGATTAAAAGAGTTT+GGG - chr6_2:69520698-69520717 None:intergenic 25.0%
! TTAAACAAAACCAAGGAAAA+GGG - chr6_2:69520844-69520863 None:intergenic 25.0%
! ATTAAACAAAACCAAGGAAA+AGG - chr6_2:69520845-69520864 None:intergenic 25.0%
!!! ATATTTGGTGTGAAGAAAAA+GGG - chr6_2:69520984-69521003 None:intergenic 25.0%
!!! AATATTTGGTGTGAAGAAAA+AGG - chr6_2:69520985-69521004 None:intergenic 25.0%
! GGTTATAAAGATTGAAACTT+TGG - chr6_2:69521154-69521173 None:intergenic 25.0%
!! TTGATTTTCAGAAAAGAGAA+CGG - chr6_2:69521202-69521221 None:intergenic 25.0%
!!! TTCTCTTTTCTGAAAATCAA+TGG + chr6_2:69521202-69521221 Msa0925990:three_prime_UTR 25.0%
!! TTTTTGATGAATACCAATGA+GGG - chr6_2:69521289-69521308 None:intergenic 25.0%
! ACAGGGTAATAAATTGAATT+TGG - chr6_2:69521539-69521558 None:intergenic 25.0%
! TTATTACCCTGTTATACTAT+TGG + chr6_2:69521547-69521566 Msa0925990:three_prime_UTR 25.0%
!!! TAAATTTGATTTGCCTCAAA+GGG + chr6_2:69521796-69521815 Msa0925990:three_prime_UTR 25.0%
!!! TATGAAAATAGCTTTGACTA+GGG - chr6_2:69523516-69523535 None:intergenic 25.0%
!!! TTATGAAAATAGCTTTGACT+AGG - chr6_2:69523517-69523536 None:intergenic 25.0%
!!! TTATGATCTAGAATTTGTTG+TGG - chr6_2:69523633-69523652 None:intergenic 25.0%
! CTTACAGCTATTAATAATCT+AGG - chr6_2:69523695-69523714 None:intergenic 25.0%
!!! TGTAAGATTGTTTCTTTTCA+GGG + chr6_2:69523709-69523728 Msa0925990:intron 25.0%
!! TTTTTACCTCTCATAATAGA+AGG - chr6_2:69523907-69523926 None:intergenic 25.0%
! ATAGAGCAAATATAGTAAAG+GGG - chr6_2:69524100-69524119 None:intergenic 25.0%
!!! ATTTGTTATCGCTTAACTAA+AGG + chr6_2:69524120-69524139 Msa0925990:intron 25.0%
! AACTAACATGATATTTCTCA+AGG - chr6_2:69524153-69524172 None:intergenic 25.0%
! AAACTGAAGTAAATTTCTCT+TGG + chr6_2:69524422-69524441 Msa0925990:intron 25.0%
!!! ATTGTTTATTTTGATCAGGA+TGG + chr6_2:69524647-69524666 Msa0925990:three_prime_UTR 25.0%
! GAAAGACATTATCAAATACA+AGG + chr6_2:69524694-69524713 Msa0925990:three_prime_UTR 25.0%
! TTATAATCAAATGTCCAAAG+AGG - chr6_2:69524986-69525005 None:intergenic 25.0%
! GAAAAATGATGTAACATTTG+AGG - chr6_2:69525009-69525028 None:intergenic 25.0%
!!! TTTTATTTTTTTCTTCTGGC+AGG + chr6_2:69525235-69525254 Msa0925990:intron 25.0%
!! TCATGAGTACATCTTTTTAA+AGG + chr6_2:69525476-69525495 Msa0925990:three_prime_UTR 25.0%
!! AATGTGCAGAATAGAAATTT+TGG - chr6_2:69525534-69525553 None:intergenic 25.0%
!! AATTCAGTGGTTAAGATTTT+TGG + chr6_2:69525788-69525807 Msa0925990:three_prime_UTR 25.0%
! TTCACTTGAAATCTTTGATA+AGG + chr6_2:69525825-69525844 Msa0925990:three_prime_UTR 25.0%
TCATTAGATGTACAATGTTG+AGG - chr6_2:69518876-69518895 None:intergenic 30.0%
CAACATTGTACATCTAATGA+TGG + chr6_2:69518876-69518895 Msa0925990:CDS 30.0%
TTGTTTGTGCTTTAGTCTAT+AGG + chr6_2:69518926-69518945 Msa0925990:intron 30.0%
! CTTTAGTCTATAGGTTTTTC+TGG + chr6_2:69518935-69518954 Msa0925990:intron 30.0%
! TAACTTGTAATACATGAGGT+GGG - chr6_2:69519060-69519079 None:intergenic 30.0%
! ATAACTTGTAATACATGAGG+TGG - chr6_2:69519061-69519080 None:intergenic 30.0%
TGTATTACAAGTTATAGACG+AGG + chr6_2:69519066-69519085 Msa0925990:CDS 30.0%
!!! ATTTTAGTTGTCAACTTCTG+AGG - chr6_2:69519292-69519311 None:intergenic 30.0%
AATTAACAGATTCAGACTCA+TGG - chr6_2:69519384-69519403 None:intergenic 30.0%
ATGAGAACTTTCATGTTACT+CGG + chr6_2:69519417-69519436 Msa0925990:CDS 30.0%
ATTCTTGATGAAGACCATTA+TGG + chr6_2:69519449-69519468 Msa0925990:CDS 30.0%
TCACATCAGTTAATCCATAA+TGG - chr6_2:69519466-69519485 None:intergenic 30.0%
! TTATGGATTAACTGATGTGA+AGG + chr6_2:69519466-69519485 Msa0925990:CDS 30.0%
TGATGTGAAGGAAAGAATAT+TGG + chr6_2:69519478-69519497 Msa0925990:CDS 30.0%
ATATTGGAATTCATAGCTGT+TGG + chr6_2:69519494-69519513 Msa0925990:CDS 30.0%
TATTGGAATTCATAGCTGTT+GGG + chr6_2:69519495-69519514 Msa0925990:CDS 30.0%
TTTAATTGGTGTGAGAAATG+GGG - chr6_2:69519615-69519634 None:intergenic 30.0%
CATCGTATATTATATACAGG+AGG + chr6_2:69519722-69519741 Msa0925990:three_prime_UTR 30.0%
!! GGGTATTTTTACTATGTTGA+CGG + chr6_2:69519867-69519886 Msa0925990:three_prime_UTR 30.0%
ATGATTAAAAGACTCAGTTG+TGG - chr6_2:69519895-69519914 None:intergenic 30.0%
GATGAAAGACTCTAATTGAA+AGG - chr6_2:69520539-69520558 None:intergenic 30.0%
!! TTGGGTCATATTAACTTGTA+TGG - chr6_2:69520680-69520699 None:intergenic 30.0%
GGAGTTTGATTAAAAGAGTT+TGG - chr6_2:69520699-69520718 None:intergenic 30.0%
TTGTGTGTGAAAAAAAGGTT+TGG - chr6_2:69520760-69520779 None:intergenic 30.0%
!!! TATTTTAATGCCCTTTTCCT+TGG + chr6_2:69520831-69520850 Msa0925990:three_prime_UTR 30.0%
! TTTTGTCTTTATCATGTGTG+CGG + chr6_2:69520866-69520885 Msa0925990:three_prime_UTR 30.0%
AAATTTCCAACCCTATTCTT+AGG + chr6_2:69520937-69520956 Msa0925990:three_prime_UTR 30.0%
TAATCATAATGTTGGGGATT+TGG - chr6_2:69521008-69521027 None:intergenic 30.0%
GGACTATAATCATAATGTTG+GGG - chr6_2:69521014-69521033 None:intergenic 30.0%
GGGACTATAATCATAATGTT+GGG - chr6_2:69521015-69521034 None:intergenic 30.0%
AGGGACTATAATCATAATGT+TGG - chr6_2:69521016-69521035 None:intergenic 30.0%
!!! TTGAGTGATCATGTTGTTTT+GGG - chr6_2:69521258-69521277 None:intergenic 30.0%
! GTTTTTGATGAATACCAATG+AGG - chr6_2:69521290-69521309 None:intergenic 30.0%
CATTGGTATTCATCAAAAAC+TGG + chr6_2:69521290-69521309 Msa0925990:three_prime_UTR 30.0%
AGGAAACAATGTCAAGAAAA+GGG - chr6_2:69521358-69521377 None:intergenic 30.0%
AAGGAAACAATGTCAAGAAA+AGG - chr6_2:69521359-69521378 None:intergenic 30.0%
!! TCTAGTTTCTTGACATTTTC+AGG - chr6_2:69521680-69521699 None:intergenic 30.0%
!! GTAAATTTGATTTGCCTCAA+AGG + chr6_2:69521795-69521814 Msa0925990:three_prime_UTR 30.0%
TGTTTAATAACTACCCTTTG+AGG - chr6_2:69521812-69521831 None:intergenic 30.0%
TCAAAGGGTAGTTATTAAAC+AGG + chr6_2:69521811-69521830 Msa0925990:three_prime_UTR 30.0%
AAACCATACACATGAAACAT+TGG - chr6_2:69521998-69522017 None:intergenic 30.0%
TTGACATTGATGAGGTTATT+AGG + chr6_2:69522077-69522096 Msa0925990:three_prime_UTR 30.0%
TGACATTGATGAGGTTATTA+GGG + chr6_2:69522078-69522097 Msa0925990:three_prime_UTR 30.0%
CCTGTATAAAATCAACGTTA+GGG - chr6_2:69522273-69522292 None:intergenic 30.0%
ACCTGTATAAAATCAACGTT+AGG - chr6_2:69522274-69522293 None:intergenic 30.0%
TCAAGCAATCATATAAACGA+TGG - chr6_2:69522346-69522365 None:intergenic 30.0%
AATAAGTTGTTTAGCCAAAC+AGG - chr6_2:69522482-69522501 None:intergenic 30.0%
GTTTGGCTAAACAACTTATT+TGG + chr6_2:69522482-69522501 Msa0925990:intron 30.0%
AAATAAGCTGAACAGAACTA+AGG + chr6_2:69522649-69522668 Msa0925990:intron 30.0%
TAAGGAAAAATGTCAAAGCT+AGG + chr6_2:69522667-69522686 Msa0925990:intron 30.0%
AAGGAAAAATGTCAAAGCTA+GGG + chr6_2:69522668-69522687 Msa0925990:intron 30.0%
TACTAAAATTAGTCCCACAT+CGG + chr6_2:69523096-69523115 Msa0925990:intron 30.0%
AGAGTTTGAAAACAATACAC+AGG + chr6_2:69523119-69523138 Msa0925990:intron 30.0%
!!! CTTTTTTTTTGACTCGAGTT+CGG - chr6_2:69523405-69523424 None:intergenic 30.0%
!! CTGTAAGATTGTTTCTTTTC+AGG + chr6_2:69523708-69523727 Msa0925990:intron 30.0%
!! ATTGTTTCTTTTCAGGGTTA+TGG + chr6_2:69523715-69523734 Msa0925990:intron 30.0%
ATTCACAACTATTCGTCAAT+AGG + chr6_2:69523787-69523806 Msa0925990:three_prime_UTR 30.0%
TTCACAACTATTCGTCAATA+GGG + chr6_2:69523788-69523807 Msa0925990:three_prime_UTR 30.0%
AAAACACGGGAGTAATATAA+AGG + chr6_2:69523959-69523978 Msa0925990:intron 30.0%
! TTTTCCCATCTAGTGAAAAA+AGG - chr6_2:69524405-69524424 None:intergenic 30.0%
AACTCTTTCCTTTAATTCTC+AGG + chr6_2:69524557-69524576 Msa0925990:intron 30.0%
TCAAGTATCCTGAGAATTAA+AGG - chr6_2:69524568-69524587 None:intergenic 30.0%
CAACAATTGATAAAGATGGT+TGG + chr6_2:69524609-69524628 Msa0925990:three_prime_UTR 30.0%
TCAGGATGGATATTTACATT+TGG + chr6_2:69524661-69524680 Msa0925990:three_prime_UTR 30.0%
TATCAAATACAAGGGATTTC+AGG + chr6_2:69524703-69524722 Msa0925990:three_prime_UTR 30.0%
!! GATTTCAGGTATCTACTTTT+AGG + chr6_2:69524717-69524736 Msa0925990:intron 30.0%
TTCATATACTTACGCTGTAA+CGG - chr6_2:69524897-69524916 None:intergenic 30.0%
TACCAAAGAAAGACAATACA+TGG + chr6_2:69525401-69525420 Msa0925990:three_prime_UTR 30.0%
TTACCATAACATGAAATTGG+TGG + chr6_2:69525428-69525447 Msa0925990:three_prime_UTR 30.0%
TAGAAAGTTCAAAAACCAGA+AGG + chr6_2:69525585-69525604 Msa0925990:three_prime_UTR 30.0%
!!! GATGGTTTTTTTTTTCCTTC+TGG - chr6_2:69525603-69525622 None:intergenic 30.0%
! TATAACTGACTAAAGGTGTA+CGG - chr6_2:69525638-69525657 None:intergenic 30.0%
CTCTTACTATAACTGACTAA+AGG - chr6_2:69525645-69525664 None:intergenic 30.0%
ATTTCTCTAGTGCATTTACA+AGG - chr6_2:69525670-69525689 None:intergenic 30.0%
! ATTGAAAAGTATGACACAAC+AGG - chr6_2:69525771-69525790 None:intergenic 30.0%
! TGTCATACTTTTCAATTCAG+TGG + chr6_2:69525775-69525794 Msa0925990:three_prime_UTR 30.0%
TCTTTGCCTGAAGAAAAATA+AGG - chr6_2:69525870-69525889 None:intergenic 30.0%
CACTAATAACAGAATCATTC+AGG + chr6_2:69525922-69525941 Msa0925990:three_prime_UTR 30.0%
! TTTCAGGTAAATTCAGGGAA+AGG + chr6_2:69519011-69519030 Msa0925990:intron 35.0%
TCAACAAGTCCAAGTAGTTA+CGG - chr6_2:69519144-69519163 None:intergenic 35.0%
! GCATAATTTTCATAGGCTCT+TGG + chr6_2:69519318-69519337 Msa0925990:intron 35.0%
AACATGAAAGTTCTCATCAC+TGG - chr6_2:69519414-69519433 None:intergenic 35.0%
TGAGAACTTTCATGTTACTC+GGG + chr6_2:69519418-69519437 Msa0925990:CDS 35.0%
AAAACTGAGGTACAATACTG+AGG - chr6_2:69519569-69519588 None:intergenic 35.0%
! AGTTGAATAAGTGAGGTGTT+CGG - chr6_2:69519760-69519779 None:intergenic 35.0%
! AAAGCACTTAGAACAGACAA+AGG + chr6_2:69519986-69520005 Msa0925990:three_prime_UTR 35.0%
TGCTTATAATAGTGATCGGA+TGG + chr6_2:69520432-69520451 Msa0925990:three_prime_UTR 35.0%
TTTGTCTTTATCATGTGTGC+GGG + chr6_2:69520867-69520886 Msa0925990:three_prime_UTR 35.0%
TGGAAATTTCTGTACGCATT+TGG - chr6_2:69520926-69520945 None:intergenic 35.0%
TTGTTGGGATCCTAAGAATA+GGG - chr6_2:69520950-69520969 None:intergenic 35.0%
TTTGTTGGGATCCTAAGAAT+AGG - chr6_2:69520951-69520970 None:intergenic 35.0%
AGGGTGAAATTGTCTTTGTT+GGG - chr6_2:69520965-69520984 None:intergenic 35.0%
AAGGGTGAAATTGTCTTTGT+TGG - chr6_2:69520966-69520985 None:intergenic 35.0%
! TGTTGGGGATTTGGAATATT+TGG - chr6_2:69520999-69521018 None:intergenic 35.0%
GAACGTAATAGCTACGTTTA+GGG - chr6_2:69521035-69521054 None:intergenic 35.0%
! GTTTTGTGTTTGTGGAAATG+GGG - chr6_2:69521068-69521087 None:intergenic 35.0%
!! GGTTTTGTGTTTGTGGAAAT+GGG - chr6_2:69521069-69521088 None:intergenic 35.0%
!! AGGTTTTGTGTTTGTGGAAA+TGG - chr6_2:69521070-69521089 None:intergenic 35.0%
!!! AAAGGGTGTTGTGTTTTTTG+AGG - chr6_2:69521110-69521129 None:intergenic 35.0%
GTGGTGTAAAATGTTGAATG+TGG - chr6_2:69521175-69521194 None:intergenic 35.0%
!! GTTGAGTGATCATGTTGTTT+TGG - chr6_2:69521259-69521278 None:intergenic 35.0%
! ATGAGGGTGTGAAAAAATGA+AGG - chr6_2:69521378-69521397 None:intergenic 35.0%
!!! ATTTTTTCACACCCTCATGA+TGG + chr6_2:69521380-69521399 Msa0925990:three_prime_UTR 35.0%
!!! TTTTTTCACACCCTCATGAT+GGG + chr6_2:69521381-69521400 Msa0925990:three_prime_UTR 35.0%
CCCAGATGAAGAATCAATAA+GGG - chr6_2:69521414-69521433 None:intergenic 35.0%
!! CCCTTATTGATTCTTCATCT+GGG + chr6_2:69521411-69521430 Msa0925990:three_prime_UTR 35.0%
ACCCAGATGAAGAATCAATA+AGG - chr6_2:69521415-69521434 None:intergenic 35.0%
GTTACCTTTAGTCAAATCCA+TGG + chr6_2:69521457-69521476 Msa0925990:three_prime_UTR 35.0%
GCTTCTGCTTTACACAAAAT+GGG + chr6_2:69521479-69521498 Msa0925990:three_prime_UTR 35.0%
GAACAGCCAATAGTATAACA+GGG - chr6_2:69521556-69521575 None:intergenic 35.0%
AGAACAGCCAATAGTATAAC+AGG - chr6_2:69521557-69521576 None:intergenic 35.0%
! CTATTGGCTGTTCTGTATTT+AGG + chr6_2:69521563-69521582 Msa0925990:three_prime_UTR 35.0%
ACACTACTAAGAGGATTCAA+TGG - chr6_2:69521602-69521621 None:intergenic 35.0%
TTGAATCCTCTTAGTAGTGT+TGG + chr6_2:69521602-69521621 Msa0925990:three_prime_UTR 35.0%
GTCAAGAAACTAGAGCTATT+AGG + chr6_2:69521686-69521705 Msa0925990:three_prime_UTR 35.0%
AAGAAACTAGAGCTATTAGG+TGG + chr6_2:69521689-69521708 Msa0925990:three_prime_UTR 35.0%
!! TTTTCTGGCACAGCAATAAT+GGG - chr6_2:69521722-69521741 None:intergenic 35.0%
!! ATTTTCTGGCACAGCAATAA+TGG - chr6_2:69521723-69521742 None:intergenic 35.0%
! CTCAAATCCTTCTCATTTTC+TGG - chr6_2:69521737-69521756 None:intergenic 35.0%
CAGAAAATGAGAAGGATTTG+AGG + chr6_2:69521735-69521754 Msa0925990:three_prime_UTR 35.0%
ATTAAACAGGAAGATACTGC+TGG + chr6_2:69521824-69521843 Msa0925990:three_prime_UTR 35.0%
CTGGTATATTGTATTCACCT+GGG + chr6_2:69521843-69521862 Msa0925990:three_prime_UTR 35.0%
TTGCCAATGTTTCATGTGTA+TGG + chr6_2:69521992-69522011 Msa0925990:three_prime_UTR 35.0%
GAGGAAATTTGACATTGATG+AGG + chr6_2:69522069-69522088 Msa0925990:three_prime_UTR 35.0%
!!! CCCTAACGTTGATTTTATAC+AGG + chr6_2:69522270-69522289 Msa0925990:three_prime_UTR 35.0%
!! GTCGTTTTCATAAGCTATCT+TGG + chr6_2:69522615-69522634 Msa0925990:intron 35.0%
GACAATTGTCTCATTGAACT+TGG + chr6_2:69522737-69522756 Msa0925990:intron 35.0%
! TGTATATAGTTCGACTCGAT+TGG + chr6_2:69522829-69522848 Msa0925990:intron 35.0%
GTTTGAAAACAATACACAGG+AGG + chr6_2:69523122-69523141 Msa0925990:intron 35.0%
CGAACTCGAGTCAAAAAAAA+AGG + chr6_2:69523403-69523422 Msa0925990:intron 35.0%
! TAAGTTTTGCGAGACTGTTT+GGG - chr6_2:69523545-69523564 None:intergenic 35.0%
! ATAAGTTTTGCGAGACTGTT+TGG - chr6_2:69523546-69523565 None:intergenic 35.0%
AATTGTTTGAGCTTGTCTAC+TGG - chr6_2:69523570-69523589 None:intergenic 35.0%
! ATGCAAATCTAGGGTAAGAT+TGG - chr6_2:69524000-69524019 None:intergenic 35.0%
ATCAACCTCATGCAAATCTA+GGG - chr6_2:69524009-69524028 None:intergenic 35.0%
AATCAACCTCATGCAAATCT+AGG - chr6_2:69524010-69524029 None:intergenic 35.0%
! TTTGCATGAGGTTGATTCAA+TGG + chr6_2:69524013-69524032 Msa0925990:intron 35.0%
ATGATATTTCTCAAGGACAC+AGG - chr6_2:69524146-69524165 None:intergenic 35.0%
ATAGCGAACAACAACAATCA+AGG + chr6_2:69524379-69524398 Msa0925990:intron 35.0%
!!! AAGGCCTTTTTTCACTAGAT+GGG + chr6_2:69524398-69524417 Msa0925990:intron 35.0%
! AGAAAAAAGAAGGTACAGGT+AGG - chr6_2:69524499-69524518 None:intergenic 35.0%
! GACAAGAAAAAAGAAGGTAC+AGG - chr6_2:69524503-69524522 None:intergenic 35.0%
CAGCAAGACAAGAAAAAAGA+AGG - chr6_2:69524509-69524528 None:intergenic 35.0%
CTCAGGATACTTGAATAATG+AGG + chr6_2:69524574-69524593 Msa0925990:intron 35.0%
! AAAGATGGTTGGTTACATAC+AGG + chr6_2:69524620-69524639 Msa0925990:three_prime_UTR 35.0%
!! AAGAGGCACTTTAGAAGATT+AGG - chr6_2:69524969-69524988 None:intergenic 35.0%
!! AATCTTCTAAAGTGCCTCTT+TGG + chr6_2:69524969-69524988 Msa0925990:intron 35.0%
TTCCCCAATTTCTTCATCTT+CGG - chr6_2:69525042-69525061 None:intergenic 35.0%
TTGCTTGACTTCTAAACTCT+AGG + chr6_2:69525349-69525368 Msa0925990:three_prime_UTR 35.0%
TGCTTGACTTCTAAACTCTA+GGG + chr6_2:69525350-69525369 Msa0925990:three_prime_UTR 35.0%
CAAAGAAAGACAATACATGG+CGG + chr6_2:69525404-69525423 Msa0925990:three_prime_UTR 35.0%
AAAGAAAGACAATACATGGC+GGG + chr6_2:69525405-69525424 Msa0925990:three_prime_UTR 35.0%
GGGTTACCATAACATGAAAT+TGG + chr6_2:69525425-69525444 Msa0925990:three_prime_UTR 35.0%
AGTCCACCAATTTCATGTTA+TGG - chr6_2:69525434-69525453 None:intergenic 35.0%
! ATAACTGACTAAAGGTGTAC+GGG - chr6_2:69525637-69525656 None:intergenic 35.0%
! ACTTTTGAACTCTTGATGCA+TGG + chr6_2:69525691-69525710 Msa0925990:three_prime_UTR 35.0%
!! TCAGTGGTTAAGATTTTTGG+TGG + chr6_2:69525791-69525810 Msa0925990:three_prime_UTR 35.0%
!!! TTAAGATTTTTGGTGGTGGA+AGG + chr6_2:69525798-69525817 Msa0925990:three_prime_UTR 35.0%
CAACAAGTCCAAGTAGTTAC+GGG - chr6_2:69519143-69519162 None:intergenic 40.0%
AGATTTCGATGTATGCCTCA+TGG + chr6_2:69519229-69519248 Msa0925990:intron 40.0%
TTGCTGAAACCTTGTTCTAG+GGG - chr6_2:69519266-69519285 None:intergenic 40.0%
CTTGCTGAAACCTTGTTCTA+GGG - chr6_2:69519267-69519286 None:intergenic 40.0%
TCTTGCTGAAACCTTGTTCT+AGG - chr6_2:69519268-69519287 None:intergenic 40.0%
ATAGCTGTTGGGAAATTGAG+AGG + chr6_2:69519506-69519525 Msa0925990:CDS 40.0%
TAGCTGTTGGGAAATTGAGA+GGG + chr6_2:69519507-69519526 Msa0925990:CDS 40.0%
AAATTGAGAGGGACTTCACA+AGG + chr6_2:69519518-69519537 Msa0925990:CDS 40.0%
TGCACTAACGTGAAAAACTG+AGG - chr6_2:69519582-69519601 None:intergenic 40.0%
! GTTGAATAAGTGAGGTGTTC+GGG - chr6_2:69519759-69519778 None:intergenic 40.0%
GCGTTCGTAGAAAAACAAAG+TGG + chr6_2:69519953-69519972 Msa0925990:three_prime_UTR 40.0%
AAAGGCCAAGAATACCTCAT+CGG + chr6_2:69520004-69520023 Msa0925990:three_prime_UTR 40.0%
GGAACGTAATAGCTACGTTT+AGG - chr6_2:69521036-69521055 None:intergenic 40.0%
GTGGAAATGGGGATATGAAA+AGG - chr6_2:69521057-69521076 None:intergenic 40.0%
!! GTGTGAAGGTTTTGTGTTTG+TGG - chr6_2:69521076-69521095 None:intergenic 40.0%
!!! TGTTGTGTTTTTTGAGGCTG+TGG - chr6_2:69521104-69521123 None:intergenic 40.0%
! CAGAAAAGAGAACGGTTTTG+TGG - chr6_2:69521194-69521213 None:intergenic 40.0%
ATGAATACCAATGAGGGTGA+GGG - chr6_2:69521283-69521302 None:intergenic 40.0%
ATGTCAAGAAAAGGGTCAGT+TGG - chr6_2:69521350-69521369 None:intergenic 40.0%
! TTTTTCACACCCTCATGATG+GGG + chr6_2:69521382-69521401 Msa0925990:three_prime_UTR 40.0%
!! GCCCTTATTGATTCTTCATC+TGG + chr6_2:69521410-69521429 Msa0925990:three_prime_UTR 40.0%
GAAGCCATGGATTTGACTAA+AGG - chr6_2:69521464-69521483 None:intergenic 40.0%
TTTGTGTAAAGCAGAAGCCA+TGG - chr6_2:69521477-69521496 None:intergenic 40.0%
GGCTTCTGCTTTACACAAAA+TGG + chr6_2:69521478-69521497 Msa0925990:three_prime_UTR 40.0%
CACAAAATGGGTGTTTCACA+AGG + chr6_2:69521491-69521510 Msa0925990:three_prime_UTR 40.0%
ATTTCGCCAACACTACTAAG+AGG - chr6_2:69521611-69521630 None:intergenic 40.0%
TGTTGGCGAAATTCGTAAAC+AGG + chr6_2:69521619-69521638 Msa0925990:three_prime_UTR 40.0%
GCTGGTATATTGTATTCACC+TGG + chr6_2:69521842-69521861 Msa0925990:three_prime_UTR 40.0%
AACAGCTAGAAACACACACT+TGG - chr6_2:69521972-69521991 None:intergenic 40.0%
GCTCTACAGTCATTGTAATG+AGG + chr6_2:69522050-69522069 Msa0925990:three_prime_UTR 40.0%
ATTGTCAATGCCGACAACAT+CGG - chr6_2:69522145-69522164 None:intergenic 40.0%
! GCATTGACAATGAAGGCAAA+GGG + chr6_2:69522154-69522173 Msa0925990:three_prime_UTR 40.0%
!! ATGAAGGCAAAGGGTGTTAA+TGG + chr6_2:69522163-69522182 Msa0925990:three_prime_UTR 40.0%
! TAAGTTGCAGAGTTTGAGAC+AGG + chr6_2:69522189-69522208 Msa0925990:three_prime_UTR 40.0%
AATCAACGTTAGGGAAAGCA+TGG - chr6_2:69522264-69522283 None:intergenic 40.0%
ACTGTTATATAGGGCCTGTT+TGG + chr6_2:69522465-69522484 Msa0925990:intron 40.0%
AAAAATGTCAAAGCTAGGGC+TGG + chr6_2:69522672-69522691 Msa0925990:intron 40.0%
!! GAACTATTGTCGAGTTGGTT+CGG - chr6_2:69522705-69522724 None:intergenic 40.0%
GTTTCGAACTATTGTCGAGT+TGG - chr6_2:69522710-69522729 None:intergenic 40.0%
! GTTTTCAAACTCTCCGATGT+GGG - chr6_2:69523112-69523131 None:intergenic 40.0%
! TGTTTTCAAACTCTCCGATG+TGG - chr6_2:69523113-69523132 None:intergenic 40.0%
AAAACAATTGTACCGTAGCG+CGG - chr6_2:69523194-69523213 None:intergenic 40.0%
AGTTCACGAACAACTCGATT+CGG - chr6_2:69523373-69523392 None:intergenic 40.0%
!! AAAATAGCTTTGACTAGGGC+TGG - chr6_2:69523512-69523531 None:intergenic 40.0%
GTTGTGGATGTGAACATCAA+TGG - chr6_2:69523617-69523636 None:intergenic 40.0%
CTATTCGTCAATAGGGTTGT+TGG + chr6_2:69523795-69523814 Msa0925990:three_prime_UTR 40.0%
AAAGTGGTAGACTGGAACAA+TGG + chr6_2:69523835-69523854 Msa0925990:three_prime_UTR 40.0%
TCTTACCCTAGATTTGCATG+AGG + chr6_2:69524001-69524020 Msa0925990:intron 40.0%
!!! GGGAGGTAGTTTTGACATAA+AGG - chr6_2:69524080-69524099 None:intergenic 40.0%
GAGCAAATATAGTAAAGGGG+AGG - chr6_2:69524097-69524116 None:intergenic 40.0%
GTTGCACTACAACACTGATA+AGG - chr6_2:69524274-69524293 None:intergenic 40.0%
!!! CAAGGCCTTTTTTCACTAGA+TGG + chr6_2:69524397-69524416 Msa0925990:intron 40.0%
TACAGGTAGGCTAAGGAATA+AGG - chr6_2:69524486-69524505 None:intergenic 40.0%
CTTCATCTTCGGCACTAATA+TGG - chr6_2:69525031-69525050 None:intergenic 40.0%
! AGTGCCGAAGATGAAGAAAT+TGG + chr6_2:69525035-69525054 Msa0925990:intron 40.0%
GTGCCGAAGATGAAGAAATT+GGG + chr6_2:69525036-69525055 Msa0925990:intron 40.0%
TGCCGAAGATGAAGAAATTG+GGG + chr6_2:69525037-69525056 Msa0925990:three_prime_UTR 40.0%
TTCTTGACAACAAATGCGAC+TGG - chr6_2:69525068-69525087 None:intergenic 40.0%
!! AGTCGCATTTGTTGTCAAGA+AGG + chr6_2:69525067-69525086 Msa0925990:three_prime_UTR 40.0%
!! GCATTTGTTGTCAAGAAGGT+TGG + chr6_2:69525071-69525090 Msa0925990:three_prime_UTR 40.0%
ACATAATCGACCACATGCTT+CGG - chr6_2:69525110-69525129 None:intergenic 40.0%
! GAGCAGGTTCTTCTTTTGAT+CGG + chr6_2:69525134-69525153 Msa0925990:intron 40.0%
AAGATACCAAGGTCTCCAAT+TGG + chr6_2:69525299-69525318 Msa0925990:three_prime_UTR 40.0%
AGATACCAAGGTCTCCAATT+GGG + chr6_2:69525300-69525319 Msa0925990:three_prime_UTR 40.0%
CGCCATGTATTGTCTTTCTT+TGG - chr6_2:69525406-69525425 None:intergenic 40.0%
! TAACTGACTAAAGGTGTACG+GGG - chr6_2:69525636-69525655 None:intergenic 40.0%
!!! GTGGTTAAGATTTTTGGTGG+TGG + chr6_2:69525794-69525813 Msa0925990:three_prime_UTR 40.0%
ACTCGCAAAGCTACAGCTAT+TGG + chr6_2:69519090-69519109 Msa0925990:CDS 45.0%
CAGTGTTACCCGTAACTACT+TGG + chr6_2:69519132-69519151 Msa0925990:CDS 45.0%
ACAAACCTGTATTCACCCCA+AGG - chr6_2:69519175-69519194 None:intergenic 45.0%
! TGCTGAAACCTTGTTCTAGG+GGG - chr6_2:69519265-69519284 None:intergenic 45.0%
GTGAGAAATGGGGTGCATTA+TGG - chr6_2:69519605-69519624 None:intergenic 45.0%
! TTGTGCCGATGAGGTATTCT+TGG - chr6_2:69520012-69520031 None:intergenic 45.0%
! GCTCTAAATTTGTGCCGATG+AGG - chr6_2:69520021-69520040 None:intergenic 45.0%
!! ACGCATTTGGCTCTCAAGTT+GGG - chr6_2:69520913-69520932 None:intergenic 45.0%
!! TACGCATTTGGCTCTCAAGT+TGG - chr6_2:69520914-69520933 None:intergenic 45.0%
TGGGATCCTAAGAATAGGGT+TGG - chr6_2:69520946-69520965 None:intergenic 45.0%
GATGAATACCAATGAGGGTG+AGG - chr6_2:69521284-69521303 None:intergenic 45.0%
GGGTCAGTTGGAAGATTTCT+AGG - chr6_2:69521338-69521357 None:intergenic 45.0%
CGTAAACAGGTTCAAGAGTG+TGG + chr6_2:69521632-69521651 Msa0925990:three_prime_UTR 45.0%
TGCTGTGCCAGAAAATGAGA+AGG + chr6_2:69521727-69521746 Msa0925990:three_prime_UTR 45.0%
TTGTATTCACCTGGGACTAC+AGG + chr6_2:69521851-69521870 Msa0925990:three_prime_UTR 45.0%
TGGTTTATCGCTCTTTGCTG+CGG + chr6_2:69522012-69522031 Msa0925990:three_prime_UTR 45.0%
TGTTGTTCCACCGATGTTGT+CGG + chr6_2:69522132-69522151 Msa0925990:three_prime_UTR 45.0%
!! GTTGTCGGCATTGACAATGA+AGG + chr6_2:69522147-69522166 Msa0925990:three_prime_UTR 45.0%
!! GGCATTGACAATGAAGGCAA+AGG + chr6_2:69522153-69522172 Msa0925990:three_prime_UTR 45.0%
! AGTTTGAGACAGGTCTCTTG+CGG + chr6_2:69522199-69522218 Msa0925990:three_prime_UTR 45.0%
CAGCTCAAGTTCAGCTCATT+TGG - chr6_2:69522771-69522790 None:intergenic 45.0%
TGTAATAAGCTACCGCGCTA+CGG + chr6_2:69523179-69523198 Msa0925990:intron 45.0%
!!! AATGGTACTTTTTTGCCCCC+AGG + chr6_2:69523853-69523872 Msa0925990:three_prime_UTR 45.0%
AGAGGGCCTTCTATTATGAG+AGG + chr6_2:69523898-69523917 Msa0925990:three_prime_UTR 45.0%
! CATGAGGTTGATTCAATGGC+TGG + chr6_2:69524017-69524036 Msa0925990:intron 45.0%
!! AAAGGTTTGAGTTGCTGCAG+TGG - chr6_2:69524062-69524081 None:intergenic 45.0%
! AAGAAGGTACAGGTAGGCTA+AGG - chr6_2:69524493-69524512 None:intergenic 45.0%
AACACAGCTTCTAGATCAGC+AGG - chr6_2:69524845-69524864 None:intergenic 45.0%
TGTACTTTCTCCGAAGCATG+TGG + chr6_2:69525097-69525116 Msa0925990:three_prime_UTR 45.0%
TTGCTCCATACAAGAAGGTC+CGG + chr6_2:69525258-69525277 Msa0925990:three_prime_UTR 45.0%
TCTTCACCGACAAGATACCA+AGG + chr6_2:69525288-69525307 Msa0925990:three_prime_UTR 45.0%
TGGAGACCTTGGTATCTTGT+CGG - chr6_2:69525297-69525316 None:intergenic 45.0%
ATCTTCCCAATTGGAGACCT+TGG - chr6_2:69525308-69525327 None:intergenic 45.0%
TTTCGGAGGATCTTCCCAAT+TGG - chr6_2:69525317-69525336 None:intergenic 45.0%
!!! ATTTTTTTTAACAAATTAAA+AGG + chr6_2:69523307-69523326 Msa0925990:intron 5.0%
! GGTGGGCATTTTTCTCGCTT+AGG - chr6_2:69519043-69519062 None:intergenic 50.0%
CGCAAAGCTACAGCTATTGG+AGG + chr6_2:69519093-69519112 Msa0925990:CDS 50.0%
! ACTTGTTGACTGCACTGCCT+TGG + chr6_2:69519155-69519174 Msa0925990:CDS 50.0%
! CTTGTTGACTGCACTGCCTT+GGG + chr6_2:69519156-69519175 Msa0925990:CDS 50.0%
! TTGTTGACTGCACTGCCTTG+GGG + chr6_2:69519157-69519176 Msa0925990:CDS 50.0%
GGGCTAAAACCCCATCATGA+GGG - chr6_2:69521394-69521413 None:intergenic 50.0%
AGGGCTAAAACCCCATCATG+AGG - chr6_2:69521395-69521414 None:intergenic 50.0%
GGTTTATCGCTCTTTGCTGC+GGG + chr6_2:69522013-69522032 Msa0925990:three_prime_UTR 50.0%
TGCTGCGGGATTATTGTCGT+TGG + chr6_2:69522027-69522046 Msa0925990:three_prime_UTR 50.0%
GCTGCGGGATTATTGTCGTT+GGG + chr6_2:69522028-69522047 Msa0925990:three_prime_UTR 50.0%
GACAACATCGGTGGAACAAC+AGG - chr6_2:69522133-69522152 None:intergenic 50.0%
!! ACAACTCGATTCGGCTCGTT+AGG - chr6_2:69523364-69523383 None:intergenic 50.0%
AATGACTGAGTCGACTGCAG+TGG + chr6_2:69523738-69523757 Msa0925990:three_prime_UTR 50.0%
ATGACTGAGTCGACTGCAGT+GGG + chr6_2:69523739-69523758 Msa0925990:three_prime_UTR 50.0%
!! AGGGTTGTTGGCTCCAAACA+CGG + chr6_2:69523807-69523826 Msa0925990:three_prime_UTR 50.0%
TCCAAACACGGAGGCAAAAG+TGG + chr6_2:69523819-69523838 Msa0925990:three_prime_UTR 50.0%
!! ACCACTTTTGCCTCCGTGTT+TGG - chr6_2:69523823-69523842 None:intergenic 50.0%
CAGTGGTGTGACTAACGTTC+AGG - chr6_2:69524045-69524064 None:intergenic 50.0%
!! ACGGCTGCATCGACTATTTC+AGG - chr6_2:69524878-69524897 None:intergenic 50.0%
GGTCGATTATGTTGCTGAGC+AGG + chr6_2:69525118-69525137 Msa0925990:three_prime_UTR 50.0%
GCAGGTTGCTCCATACAAGA+AGG + chr6_2:69525253-69525272 Msa0925990:intron 50.0%
TCCATACAAGAAGGTCCGGA+AGG + chr6_2:69525262-69525281 Msa0925990:three_prime_UTR 50.0%
ACCTTCCGGACCTTCTTGTA+TGG - chr6_2:69525266-69525285 None:intergenic 50.0%
TGTCGGTGAAGAACACCTTC+CGG - chr6_2:69525280-69525299 None:intergenic 50.0%
! AGCAATGCCTGAGCTGCTTT+CGG - chr6_2:69525334-69525353 None:intergenic 50.0%
GTACGGGGCAGAGTAATTGA+TGG - chr6_2:69525621-69525640 None:intergenic 50.0%
CACTGCCTTGGGGTGAATAC+AGG + chr6_2:69519167-69519186 Msa0925990:CDS 55.0%
AACGCAGTCCCCCTAGAACA+AGG + chr6_2:69519254-69519273 Msa0925990:intron 55.0%
AGCTTGTGAGCTACTCGCTC+CGG + chr6_2:69520297-69520316 Msa0925990:three_prime_UTR 55.0%
AGGCTGTGGCTTGAGTGTGA+AGG - chr6_2:69521090-69521109 None:intergenic 55.0%
CTCAACACCCTCACCCTCAT+TGG + chr6_2:69521273-69521292 Msa0925990:three_prime_UTR 55.0%
TTGCTCACACCTGTAGTCCC+AGG - chr6_2:69521863-69521882 None:intergenic 55.0%
GGGACTACAGGTGTGAGCAA+AGG + chr6_2:69521863-69521882 Msa0925990:three_prime_UTR 55.0%
GTCAATGCCGACAACATCGG+TGG - chr6_2:69522142-69522161 None:intergenic 55.0%
! GGTGCAGCGCTTTTGAGCAT+AGG + chr6_2:69522220-69522239 Msa0925990:three_prime_UTR 55.0%
ATCGAGTCGAGTCGAGCTCT+CGG + chr6_2:69523469-69523488 Msa0925990:intron 55.0%
!! GTTGTTGGCTCCAAACACGG+AGG + chr6_2:69523810-69523829 Msa0925990:three_prime_UTR 55.0%
CGGAGGCAAAAGTGGTAGAC+TGG + chr6_2:69523827-69523846 Msa0925990:three_prime_UTR 55.0%
! TGCGGTGAGCTTTGGTTGAG+AGG + chr6_2:69523880-69523899 Msa0925990:three_prime_UTR 55.0%
! GCGGTGAGCTTTGGTTGAGA+GGG + chr6_2:69523881-69523900 Msa0925990:three_prime_UTR 55.0%
AGATCCTCCGAAAGCAGCTC+AGG + chr6_2:69525324-69525343 Msa0925990:three_prime_UTR 55.0%
! AATGCCTGAGCTGCTTTCGG+AGG - chr6_2:69525331-69525350 None:intergenic 55.0%
TCGACTGCAGTGGGAACACG+TGG + chr6_2:69523748-69523767 Msa0925990:three_prime_UTR 60.0%
! TTTTTGCCCCCAGGCAGCTG+CGG + chr6_2:69523862-69523881 Msa0925990:three_prime_UTR 60.0%
AAAGCTCACCGCAGCTGCCT+GGG - chr6_2:69523873-69523892 None:intergenic 60.0%
GGGGGACTGCGTTCTCCATG+AGG - chr6_2:69519247-69519266 None:intergenic 65.0%
AAGCTCACCGCAGCTGCCTG+GGG - chr6_2:69523872-69523891 None:intergenic 65.0%
CAAAGCTCACCGCAGCTGCC+TGG - chr6_2:69523874-69523893 None:intergenic 65.0%
CAGGCAGCTGCGGTGAGCTT+TGG + chr6_2:69523872-69523891 Msa0925990:three_prime_UTR 65.0%
AGCTCACCGCAGCTGCCTGG+GGG - chr6_2:69523871-69523890 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr6_2 gene 69518864 69525951 69518864 ID=Msa0925990;Name=Msa0925990
chr6_2 mRNA 69518864 69525951 69518864 ID=Msa0925990-mRNA-1;Parent=Msa0925990;Name=Msa0925990-mRNA-1;_AED=0.13;_eAED=0.13;_QI=0|0.85|0.87|0.87|1|0.87|8|3886|132
chr6_2 exon 69518864 69518897 69518864 ID=Msa0925990-mRNA-1:exon:11232;Parent=Msa0925990-mRNA-1
chr6_2 exon 69519017 69519188 69519017 ID=Msa0925990-mRNA-1:exon:11233;Parent=Msa0925990-mRNA-1
chr6_2 exon 69519415 69522291 69519415 ID=Msa0925990-mRNA-1:exon:11234;Parent=Msa0925990-mRNA-1
chr6_2 exon 69523730 69523919 69523730 ID=Msa0925990-mRNA-1:exon:11235;Parent=Msa0925990-mRNA-1
chr6_2 exon 69524579 69524724 69524579 ID=Msa0925990-mRNA-1:exon:11236;Parent=Msa0925990-mRNA-1
chr6_2 exon 69524836 69524903 69524836 ID=Msa0925990-mRNA-1:exon:11237;Parent=Msa0925990-mRNA-1
chr6_2 exon 69525037 69525139 69525037 ID=Msa0925990-mRNA-1:exon:11238;Parent=Msa0925990-mRNA-1
chr6_2 exon 69525257 69525951 69525257 ID=Msa0925990-mRNA-1:exon:11239;Parent=Msa0925990-mRNA-1
chr6_2 CDS 69518864 69518897 69518864 ID=Msa0925990-mRNA-1:cds;Parent=Msa0925990-mRNA-1
chr6_2 CDS 69519017 69519188 69519017 ID=Msa0925990-mRNA-1:cds;Parent=Msa0925990-mRNA-1
chr6_2 CDS 69519415 69519607 69519415 ID=Msa0925990-mRNA-1:cds;Parent=Msa0925990-mRNA-1
chr6_2 three_prime_UTR 69519608 69522291 69519608 ID=Msa0925990-mRNA-1:three_prime_utr;Parent=Msa0925990-mRNA-1
chr6_2 three_prime_UTR 69523730 69523919 69523730 ID=Msa0925990-mRNA-1:three_prime_utr;Parent=Msa0925990-mRNA-1
chr6_2 three_prime_UTR 69524579 69524724 69524579 ID=Msa0925990-mRNA-1:three_prime_utr;Parent=Msa0925990-mRNA-1
chr6_2 three_prime_UTR 69524836 69524903 69524836 ID=Msa0925990-mRNA-1:three_prime_utr;Parent=Msa0925990-mRNA-1
chr6_2 three_prime_UTR 69525037 69525139 69525037 ID=Msa0925990-mRNA-1:three_prime_utr;Parent=Msa0925990-mRNA-1
chr6_2 three_prime_UTR 69525257 69525951 69525257 ID=Msa0925990-mRNA-1:three_prime_utr;Parent=Msa0925990-mRNA-1
Gene Sequence

>Msa0925990

ATGGTTCAACCTCAACATTGTACATCTAATGATGGTAAATTCAGGGAAAGGATTGAACCTAAGCGAGAAAAATGCCCACCTCATGTATTACAAGTTATAGACGAGGAACTCGCAAAGCTACAGCTATTGGAGGCTAGTTCTAGTGAATTCAGTGTTACCCGTAACTACTTGGACTTGTTGACTGCACTGCCTTGGGGTGAATACAGTGATGAGAACTTTCATGTTACTCGGGCACAAAAAATTCTTGATGAAGACCATTATGGATTAACTGATGTGAAGGAAAGAATATTGGAATTCATAGCTGTTGGGAAATTGAGAGGGACTTCACAAGGTAACTACAATCACTTATGTATTGTACCTCAGTATTGTACCTCAGTTTTTCACGTTAGTGCACCATAA
Protein sequence

>Msa0925990

MVQPQHCTSNDGKFRERIEPKREKCPPHVLQVIDEELAKLQLLEASSSEFSVTRNYLDLLTALPWGEYSDENFHVTRAQKILDEDHYGLTDVKERILEFIAVGKLRGTSQGNYNHLCIVPQYCTSVFHVSAP*