AlfalfaGEDB | Msa0910660

M. sativa cultivar zhongmu-4 / Msa0910660

KEGG: K15306
GO: GO:0000060 GO:0000082 GO:0000226 GO:0000278 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006403 GO:0006405 GO:0006508 GO:0006511 GO:0006606 GO:0006807 GO:0006810 GO:0006886 GO:0006913 GO:0006996 GO:0007010 GO:0007017 GO:0007049 GO:0007051 GO:0008104 GO:0008150 GO:0008152 GO:0008536 GO:0009056 GO:0009057 GO:0009987 GO:0015031 GO:0015833 GO:0015931 GO:0016043 GO:0017016 GO:0017038 GO:0019538 GO:0019899 GO:0019941 GO:0022402 GO:0030163 GO:0031267 GO:0033036 GO:0033365 GO:0034504 GO:0034613 GO:0042886 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044424 GO:0044464 GO:0044770 GO:0044772 GO:0044843 GO:0045184 GO:0046907 GO:0050657 GO:0050658 GO:0051020 GO:0051168 GO:0051169 GO:0051170 GO:0051179 GO:0051234 GO:0051236 GO:0051603 GO:0051641 GO:0051649 GO:0070727 GO:0071702 GO:0071704 GO:0071705 GO:0071840 GO:0072594 GO:1901564 GO:1901565 GO:1901575 GO:1903047
PFAM: PF00638.21

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0910660	KCW85420.1	67.797	59	17	2	1	58	91	148	1.01e-14	76.6

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0910660	sp\|Q9LMK7\|RBP1A_ARATH	63.462	52	18	1	1	52	89	139	1.72e-13	67.4

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0047110	Msa0910660	0.803281	3.757728e-49	-8.615850e-47
Msa0636510	Msa0910660	0.838366	3.001446e-57	-8.615850e-47
Msa0705970	Msa0910660	0.850151	2.044254e-60	-8.615850e-47
Msa0768370	Msa0910660	0.805803	1.119206e-49	-8.615850e-47
Msa0416650	Msa0910660	0.812153	4.893147e-51	-8.615850e-47
Msa0435230	Msa0910660	0.805400	1.359901e-49	-8.615850e-47
Msa0479340	Msa0910660	0.810464	1.137660e-50	-8.615850e-47
Msa0885890	Msa0910660	0.862731	4.116493e-64	-8.615850e-47
Msa0897330	Msa0910660	0.805892	1.071617e-49	-8.615850e-47
Msa0910660	Msa0963070	0.813109	3.023168e-51	-8.615850e-47
Msa0910660	Msa0974080	0.813313	2.727240e-51	-8.615850e-47
Msa0910660	Msa0985560	0.897495	1.330953e-76	-8.615850e-47
Msa0910660	Msa1090240	0.887602	1.234860e-72	-8.615850e-47
Msa0910660	Msa1276890	0.803494	3.394052e-49	-8.615850e-47
Msa0910660	Msa1284680	0.813205	2.879363e-51	-8.615850e-47
Msa0910660	Msa1302830	0.800631	1.316154e-48	-8.615850e-47
Msa0910660	Msa1410680	0.802256	6.114696e-49	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0910660	MtrunA17_Chr1g0201251	69.231	52	15	1	1	52	86	136	1.28e-17	75.1
Msa0910660	MtrunA17_Chr6g0466891	63.462	52	18	1	1	52	86	136	2.02e-16	72.0
Msa0910660	MtrunA17_Chr3g0090241	72.340	47	12	1	1	47	86	131	1.06e-14	66.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0910660	AT1G07140.1	63.462	52	18	1	1	52	89	139	1.75e-14	67.4
Msa0910660	AT2G30060.1	65.957	47	15	1	1	47	91	136	3.56e-13	63.5
Msa0910660	AT5G58590.1	59.615	52	20	1	1	52	88	138	1.82e-12	61.6

Find 38 sgRNAs with CRISPR-Local

Find 118 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GTATATGTTGGTGTGCTTTC+TGG	0.146976	6_2:-15474983	Msa0910660:CDS
ACAACCGAGCCGTACTAAAT+TGG	0.252478	6_2:+15475893	None:intergenic
GCTGCTTCAACTGTGTTTGC+AGG	0.266451	6_2:-15475007	Msa0910660:CDS
CCGAGAGAGTAGGGTGTATT+TGG	0.267050	6_2:-15475273	Msa0910660:intron
AGCGCAGATCTTGAGGGTTT+TGG	0.290367	6_2:+15475767	None:intergenic
CAGTTCTGTTCGAGGAAGTT+GGG	0.316931	6_2:-15475098	Msa0910660:CDS
ATAAGGTTACTTGAAAAGTT+AGG	0.336456	6_2:-15475806	Msa0910660:five_prime_UTR
GATTCGGTTGCTAGCAGTTT+GGG	0.375277	6_2:-15475029	Msa0910660:CDS
TGATTCGGTTGCTAGCAGTT+TGG	0.405660	6_2:-15475030	Msa0910660:CDS
CGATGGAGTTCTTAAGCATA+AGG	0.412330	6_2:-15475823	Msa0910660:five_prime_UTR
GCAGTTCTGTTCGAGGAAGT+TGG	0.425432	6_2:-15475099	Msa0910660:CDS
GAATTGAGAAATCGTGTGTT+TGG	0.437554	6_2:-15475601	Msa0910660:CDS
CTATCTTGTTAAAGTGGTGT+TGG	0.446382	6_2:-15475299	Msa0910660:CDS
GAAAAGTTAGGCTTCTTATG+AGG	0.446917	6_2:-15475794	Msa0910660:exon
TAACTTTATGAGTTCTTGAC+TGG	0.460076	6_2:-15475848	Msa0910660:five_prime_UTR
AATCGTGTGTTTGGCATGCT+AGG	0.466273	6_2:-15475592	Msa0910660:CDS
CTGCTTCAACTGTGTTTGCA+GGG	0.486018	6_2:-15475006	Msa0910660:CDS
CGAGGAAGTTGGGGTCTAGT+TGG	0.486820	6_2:-15475088	Msa0910660:CDS
ACGATTAGCGCAGATCTTGA+GGG	0.489998	6_2:+15475761	None:intergenic
TTCTCTTGCATACTCATCAT+AGG	0.492591	6_2:+15475629	None:intergenic
GACGATTAGCGCAGATCTTG+AGG	0.502484	6_2:+15475760	None:intergenic
TCTGCCATGAGATGGTGATT+CGG	0.523598	6_2:-15475045	Msa0910660:CDS
CATGCTAGGGATTCTGCTGA+TGG	0.533927	6_2:-15475578	Msa0910660:intron
TGATAACTATCTTGTTAAAG+TGG	0.534578	6_2:-15475305	Msa0910660:CDS
ATCGTGTGTTTGGCATGCTA+GGG	0.537370	6_2:-15475591	Msa0910660:CDS
TGTTGGAATCCGAGAGAGTA+GGG	0.545544	6_2:-15475282	Msa0910660:CDS
CCAAATACACCCTACTCTCT+CGG	0.552355	6_2:+15475273	None:intergenic
ATGAGTATGCAAGAGAATGT+TGG	0.553283	6_2:-15475623	Msa0910660:CDS
TGAGTTCTTGACTGGTACGA+TGG	0.554894	6_2:-15475840	Msa0910660:five_prime_UTR
TGCTTCAACTGTGTTTGCAG+GGG	0.555834	6_2:-15475005	Msa0910660:CDS
AGTTCTGTTCGAGGAAGTTG+GGG	0.577830	6_2:-15475097	Msa0910660:CDS
GTGTTGGAATCCGAGAGAGT+AGG	0.584549	6_2:-15475283	Msa0910660:CDS
AGCAAAGATATTAGCTGCGG+AGG	0.590198	6_2:-15475918	None:intergenic
GCGGAGGATCCAATTTAGTA+CGG	0.590877	6_2:-15475902	Msa0910660:five_prime_UTR
GGATCCAATTTAGTACGGCT+CGG	0.591535	6_2:-15475897	Msa0910660:five_prime_UTR
GTGTTTGCAGGGGTATATGT+TGG	0.608820	6_2:-15474995	Msa0910660:CDS
AGCAGCAAAGATATTAGCTG+CGG	0.638123	6_2:-15475921	None:intergenic
GCAACCGAATCACCATCTCA+TGG	0.649274	6_2:+15475041	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TGTTAGATGATGTTTTATTT+TGG	-	chr6_2:15475442-15475461	Msa0910660:intron	20.0%
!!!	GTTAGATGATGTTTTATTTT+GGG	-	chr6_2:15475443-15475462	Msa0910660:intron	20.0%
!!!	TTAGATGATGTTTTATTTTG+GGG	-	chr6_2:15475444-15475463	Msa0910660:intron	20.0%
!!!	TGTTAGATGATGTTTTATTT+TGG	-	chr6_2:15475442-15475461	Msa0910660:intron	20.0%
!!!	GTTAGATGATGTTTTATTTT+GGG	-	chr6_2:15475443-15475462	Msa0910660:intron	20.0%
!!!	TTAGATGATGTTTTATTTTG+GGG	-	chr6_2:15475444-15475463	Msa0910660:intron	20.0%
!	ATAAGGTTACTTGAAAAGTT+AGG	-	chr6_2:15475067-15475086	Msa0910660:CDS	25.0%
!!!	TTTTGTGATTTTGATTGTTG+TGG	-	chr6_2:15475198-15475217	Msa0910660:intron	25.0%
!!!	CAGATTTTTTGTAGTTAGAT+TGG	-	chr6_2:15475396-15475415	Msa0910660:intron	25.0%
!!	ATTGGTTTAGATGAATATTG+TGG	-	chr6_2:15475414-15475433	Msa0910660:intron	25.0%
!	TTGGTTTAGATGAATATTGT+GGG	-	chr6_2:15475415-15475434	Msa0910660:intron	25.0%
!!!	TAGATGATGTTTTATTTTGG+GGG	-	chr6_2:15475445-15475464	Msa0910660:intron	25.0%
!	TGATAACTATCTTGTTAAAG+TGG	-	chr6_2:15475568-15475587	Msa0910660:intron	25.0%
!	AAATGAGTAAAATTACAGAC+CGG	+	chr6_2:15475661-15475680	None:intergenic	25.0%
!	GTTTACTTATCCAAAAAGAT+AGG	-	chr6_2:15475693-15475712	Msa0910660:intron	25.0%
!!	AGGAAAAATTCCTATCTTTT+TGG	+	chr6_2:15475706-15475725	None:intergenic	25.0%
!	ATAAGGTTACTTGAAAAGTT+AGG	-	chr6_2:15475067-15475086	Msa0910660:CDS	25.0%
!!!	TTTTGTGATTTTGATTGTTG+TGG	-	chr6_2:15475198-15475217	Msa0910660:intron	25.0%
!!!	CAGATTTTTTGTAGTTAGAT+TGG	-	chr6_2:15475396-15475415	Msa0910660:intron	25.0%
!!	ATTGGTTTAGATGAATATTG+TGG	-	chr6_2:15475414-15475433	Msa0910660:intron	25.0%
!	TTGGTTTAGATGAATATTGT+GGG	-	chr6_2:15475415-15475434	Msa0910660:intron	25.0%
!!!	TAGATGATGTTTTATTTTGG+GGG	-	chr6_2:15475445-15475464	Msa0910660:intron	25.0%
!	TGATAACTATCTTGTTAAAG+TGG	-	chr6_2:15475568-15475587	Msa0910660:intron	25.0%
!	AAATGAGTAAAATTACAGAC+CGG	+	chr6_2:15475661-15475680	None:intergenic	25.0%
!	GTTTACTTATCCAAAAAGAT+AGG	-	chr6_2:15475693-15475712	Msa0910660:intron	25.0%
!!	AGGAAAAATTCCTATCTTTT+TGG	+	chr6_2:15475706-15475725	None:intergenic	25.0%
	TAACTTTATGAGTTCTTGAC+TGG	-	chr6_2:15475025-15475044	Msa0910660:CDS	30.0%
!	AAGATGCACTTTTCTGTTTT+CGG	-	chr6_2:15475327-15475346	Msa0910660:intron	30.0%
!	AAGATAGGAATTTTTCCTTG+TGG	-	chr6_2:15475708-15475727	Msa0910660:intron	30.0%
	AAAGGAAAATATGTACCACA+AGG	+	chr6_2:15475726-15475745	None:intergenic	30.0%
!	TTGTGGTACATATTTTCCTT+TGG	-	chr6_2:15475725-15475744	Msa0910660:intron	30.0%
	TAACTTTATGAGTTCTTGAC+TGG	-	chr6_2:15475025-15475044	Msa0910660:CDS	30.0%
!	AAGATGCACTTTTCTGTTTT+CGG	-	chr6_2:15475327-15475346	Msa0910660:intron	30.0%
!	AAGATAGGAATTTTTCCTTG+TGG	-	chr6_2:15475708-15475727	Msa0910660:intron	30.0%
	AAAGGAAAATATGTACCACA+AGG	+	chr6_2:15475726-15475745	None:intergenic	30.0%
!	TTGTGGTACATATTTTCCTT+TGG	-	chr6_2:15475725-15475744	Msa0910660:intron	30.0%
	GAAAAGTTAGGCTTCTTATG+AGG	-	chr6_2:15475079-15475098	Msa0910660:CDS	35.0%
	TTCTCTTGCATACTCATCAT+AGG	+	chr6_2:15475247-15475266	None:intergenic	35.0%
	ATGAGTATGCAAGAGAATGT+TGG	-	chr6_2:15475250-15475269	Msa0910660:intron	35.0%
	GAATTGAGAAATCGTGTGTT+TGG	-	chr6_2:15475272-15475291	Msa0910660:intron	35.0%
	ACTCAACAACTATTGACATG+TGG	-	chr6_2:15475513-15475532	Msa0910660:intron	35.0%
	CTATCTTGTTAAAGTGGTGT+TGG	-	chr6_2:15475574-15475593	Msa0910660:intron	35.0%
!	TTTCCTTTGGTAATTGTAGC+AGG	-	chr6_2:15475738-15475757	Msa0910660:intron	35.0%
!	TTCCTTTGGTAATTGTAGCA+GGG	-	chr6_2:15475739-15475758	Msa0910660:intron	35.0%
	GAAAAGTTAGGCTTCTTATG+AGG	-	chr6_2:15475079-15475098	Msa0910660:CDS	35.0%
	TTCTCTTGCATACTCATCAT+AGG	+	chr6_2:15475247-15475266	None:intergenic	35.0%
	ATGAGTATGCAAGAGAATGT+TGG	-	chr6_2:15475250-15475269	Msa0910660:intron	35.0%
	GAATTGAGAAATCGTGTGTT+TGG	-	chr6_2:15475272-15475291	Msa0910660:intron	35.0%
	ACTCAACAACTATTGACATG+TGG	-	chr6_2:15475513-15475532	Msa0910660:intron	35.0%
	CTATCTTGTTAAAGTGGTGT+TGG	-	chr6_2:15475574-15475593	Msa0910660:intron	35.0%
!	TTTCCTTTGGTAATTGTAGC+AGG	-	chr6_2:15475738-15475757	Msa0910660:intron	35.0%
!	TTCCTTTGGTAATTGTAGCA+GGG	-	chr6_2:15475739-15475758	Msa0910660:intron	35.0%
	CGATGGAGTTCTTAAGCATA+AGG	-	chr6_2:15475050-15475069	Msa0910660:CDS	40.0%
	AAATTACAGACCGGACAAGA+TGG	+	chr6_2:15475652-15475671	None:intergenic	40.0%
!!!	CAGTTTTTTCTGCCATGAGA+TGG	-	chr6_2:15475820-15475839	Msa0910660:five_prime_UTR	40.0%
	GTATATGTTGGTGTGCTTTC+TGG	-	chr6_2:15475890-15475909	Msa0910660:five_prime_UTR	40.0%
	CGATGGAGTTCTTAAGCATA+AGG	-	chr6_2:15475050-15475069	Msa0910660:CDS	40.0%
	AAATTACAGACCGGACAAGA+TGG	+	chr6_2:15475652-15475671	None:intergenic	40.0%
!!!	CAGTTTTTTCTGCCATGAGA+TGG	-	chr6_2:15475820-15475839	Msa0910660:five_prime_UTR	40.0%
	GTATATGTTGGTGTGCTTTC+TGG	-	chr6_2:15475890-15475909	Msa0910660:five_prime_UTR	40.0%
	GCGGAGGATCCAATTTAGTA+CGG	-	chr6_2:15474971-15474990	Msa0910660:CDS	45.0%
	GGATCCAATTTAGTACGGCT+CGG	-	chr6_2:15474976-15474995	Msa0910660:CDS	45.0%
	ACAACCGAGCCGTACTAAAT+TGG	+	chr6_2:15474983-15475002	None:intergenic	45.0%
	TGAGTTCTTGACTGGTACGA+TGG	-	chr6_2:15475033-15475052	Msa0910660:CDS	45.0%
	ACGATTAGCGCAGATCTTGA+GGG	+	chr6_2:15475115-15475134	None:intergenic	45.0%
	AATCGTGTGTTTGGCATGCT+AGG	-	chr6_2:15475281-15475300	Msa0910660:CDS	45.0%
	ATCGTGTGTTTGGCATGCTA+GGG	-	chr6_2:15475282-15475301	Msa0910660:CDS	45.0%
	TGTTGGAATCCGAGAGAGTA+GGG	-	chr6_2:15475591-15475610	Msa0910660:CDS	45.0%
	CCAAATACACCCTACTCTCT+CGG	+	chr6_2:15475603-15475622	None:intergenic	45.0%
	CACCCTGCTACAATTACCAA+AGG	+	chr6_2:15475744-15475763	None:intergenic	45.0%
!	GTCTTTTGCAGTTCTGTTCG+AGG	-	chr6_2:15475767-15475786	Msa0910660:CDS	45.0%
	CAGTTCTGTTCGAGGAAGTT+GGG	-	chr6_2:15475775-15475794	Msa0910660:CDS	45.0%
	AGTTCTGTTCGAGGAAGTTG+GGG	-	chr6_2:15475776-15475795	Msa0910660:CDS	45.0%
	TCTGCCATGAGATGGTGATT+CGG	-	chr6_2:15475828-15475847	Msa0910660:five_prime_UTR	45.0%
!!	TGATTCGGTTGCTAGCAGTT+TGG	-	chr6_2:15475843-15475862	Msa0910660:five_prime_UTR	45.0%
!	GATTCGGTTGCTAGCAGTTT+GGG	-	chr6_2:15475844-15475863	Msa0910660:five_prime_UTR	45.0%
	CTGCTTCAACTGTGTTTGCA+GGG	-	chr6_2:15475867-15475886	Msa0910660:five_prime_UTR	45.0%
	TGCTTCAACTGTGTTTGCAG+GGG	-	chr6_2:15475868-15475887	Msa0910660:five_prime_UTR	45.0%
!	GTGTTTGCAGGGGTATATGT+TGG	-	chr6_2:15475878-15475897	Msa0910660:five_prime_UTR	45.0%
	GCGGAGGATCCAATTTAGTA+CGG	-	chr6_2:15474971-15474990	Msa0910660:CDS	45.0%
	GGATCCAATTTAGTACGGCT+CGG	-	chr6_2:15474976-15474995	Msa0910660:CDS	45.0%
	ACAACCGAGCCGTACTAAAT+TGG	+	chr6_2:15474983-15475002	None:intergenic	45.0%
	TGAGTTCTTGACTGGTACGA+TGG	-	chr6_2:15475033-15475052	Msa0910660:CDS	45.0%
	ACGATTAGCGCAGATCTTGA+GGG	+	chr6_2:15475115-15475134	None:intergenic	45.0%
	AATCGTGTGTTTGGCATGCT+AGG	-	chr6_2:15475281-15475300	Msa0910660:CDS	45.0%
	ATCGTGTGTTTGGCATGCTA+GGG	-	chr6_2:15475282-15475301	Msa0910660:CDS	45.0%
	TGTTGGAATCCGAGAGAGTA+GGG	-	chr6_2:15475591-15475610	Msa0910660:CDS	45.0%
	CCAAATACACCCTACTCTCT+CGG	+	chr6_2:15475603-15475622	None:intergenic	45.0%
	CACCCTGCTACAATTACCAA+AGG	+	chr6_2:15475744-15475763	None:intergenic	45.0%
!	GTCTTTTGCAGTTCTGTTCG+AGG	-	chr6_2:15475767-15475786	Msa0910660:CDS	45.0%
	CAGTTCTGTTCGAGGAAGTT+GGG	-	chr6_2:15475775-15475794	Msa0910660:CDS	45.0%
	AGTTCTGTTCGAGGAAGTTG+GGG	-	chr6_2:15475776-15475795	Msa0910660:CDS	45.0%
	TCTGCCATGAGATGGTGATT+CGG	-	chr6_2:15475828-15475847	Msa0910660:five_prime_UTR	45.0%
!!	TGATTCGGTTGCTAGCAGTT+TGG	-	chr6_2:15475843-15475862	Msa0910660:five_prime_UTR	45.0%
!	GATTCGGTTGCTAGCAGTTT+GGG	-	chr6_2:15475844-15475863	Msa0910660:five_prime_UTR	45.0%
	CTGCTTCAACTGTGTTTGCA+GGG	-	chr6_2:15475867-15475886	Msa0910660:five_prime_UTR	45.0%
	TGCTTCAACTGTGTTTGCAG+GGG	-	chr6_2:15475868-15475887	Msa0910660:five_prime_UTR	45.0%
!	GTGTTTGCAGGGGTATATGT+TGG	-	chr6_2:15475878-15475897	Msa0910660:five_prime_UTR	45.0%
!	AGCGCAGATCTTGAGGGTTT+TGG	+	chr6_2:15475109-15475128	None:intergenic	50.0%
	GACGATTAGCGCAGATCTTG+AGG	+	chr6_2:15475116-15475135	None:intergenic	50.0%
	CATGCTAGGGATTCTGCTGA+TGG	-	chr6_2:15475295-15475314	Msa0910660:CDS	50.0%
	GTGTTGGAATCCGAGAGAGT+AGG	-	chr6_2:15475590-15475609	Msa0910660:CDS	50.0%
	CCGAGAGAGTAGGGTGTATT+TGG	-	chr6_2:15475600-15475619	Msa0910660:CDS	50.0%
	GTTGCACATGCCATCTTGTC+CGG	-	chr6_2:15475639-15475658	Msa0910660:intron	50.0%
	GCAGTTCTGTTCGAGGAAGT+TGG	-	chr6_2:15475774-15475793	Msa0910660:CDS	50.0%
	GCAACCGAATCACCATCTCA+TGG	+	chr6_2:15475835-15475854	None:intergenic	50.0%
	GCTGCTTCAACTGTGTTTGC+AGG	-	chr6_2:15475866-15475885	Msa0910660:five_prime_UTR	50.0%
!	AGCGCAGATCTTGAGGGTTT+TGG	+	chr6_2:15475109-15475128	None:intergenic	50.0%
	GACGATTAGCGCAGATCTTG+AGG	+	chr6_2:15475116-15475135	None:intergenic	50.0%
	CATGCTAGGGATTCTGCTGA+TGG	-	chr6_2:15475295-15475314	Msa0910660:CDS	50.0%
	GTGTTGGAATCCGAGAGAGT+AGG	-	chr6_2:15475590-15475609	Msa0910660:CDS	50.0%
	CCGAGAGAGTAGGGTGTATT+TGG	-	chr6_2:15475600-15475619	Msa0910660:CDS	50.0%
	GTTGCACATGCCATCTTGTC+CGG	-	chr6_2:15475639-15475658	Msa0910660:intron	50.0%
	GCAGTTCTGTTCGAGGAAGT+TGG	-	chr6_2:15475774-15475793	Msa0910660:CDS	50.0%
	GCAACCGAATCACCATCTCA+TGG	+	chr6_2:15475835-15475854	None:intergenic	50.0%
	GCTGCTTCAACTGTGTTTGC+AGG	-	chr6_2:15475866-15475885	Msa0910660:five_prime_UTR	50.0%
	CGAGGAAGTTGGGGTCTAGT+TGG	-	chr6_2:15475785-15475804	Msa0910660:exon	55.0%
	CGAGGAAGTTGGGGTCTAGT+TGG	-	chr6_2:15475785-15475804	Msa0910660:exon	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr6_2	gene	15474961	15475934	15474961	ID=Msa0910660;Name=Msa0910660
chr6_2	mRNA	15474961	15475934	15474961	ID=Msa0910660-mRNA-1;Parent=Msa0910660;Name=Msa0910660-mRNA-1;_AED=0.39;_eAED=0.39;_QI=135\|0.33\|0.25\|0.75\|1\|0.75\|4\|0\|122
chr6_2	exon	15474961	15475135	15474961	ID=Msa0910660-mRNA-1:exon:3431;Parent=Msa0910660-mRNA-1
chr6_2	exon	15475274	15475343	15475274	ID=Msa0910660-mRNA-1:exon:3430;Parent=Msa0910660-mRNA-1
chr6_2	exon	15475579	15475656	15475579	ID=Msa0910660-mRNA-1:exon:3429;Parent=Msa0910660-mRNA-1
chr6_2	exon	15475757	15475934	15475757	ID=Msa0910660-mRNA-1:exon:3428;Parent=Msa0910660-mRNA-1
chr6_2	five_prime_UTR	15475800	15475934	15475800	ID=Msa0910660-mRNA-1:five_prime_utr;Parent=Msa0910660-mRNA-1
chr6_2	CDS	15475757	15475799	15475757	ID=Msa0910660-mRNA-1:cds;Parent=Msa0910660-mRNA-1
chr6_2	CDS	15475579	15475656	15475579	ID=Msa0910660-mRNA-1:cds;Parent=Msa0910660-mRNA-1
chr6_2	CDS	15475274	15475343	15475274	ID=Msa0910660-mRNA-1:cds;Parent=Msa0910660-mRNA-1
chr6_2	CDS	15474961	15475135	15474961	ID=Msa0910660-mRNA-1:cds;Parent=Msa0910660-mRNA-1

Gene Sequence	>Msa0910660 ATGAGGCAATCCAAAACCCTCAAGATCTGCGCTAATCGTCTTATTATACCTATGATGAGTATGCAAGAGAATGTTGGAATTGAGAAATCGTGTGTTTGGCATGCTAGGGATTCTGCTGATGTGAATGAATTAATTGATGATAACTATCTTGTTAAAGTGGTGTTGGAATCCGAGAGAGTAGGGTGTATTTGGGTGTTTGTCTTTTGCAGTTCTGTTCGAGGAAGTTGGGGTCTAGTTGGCTATAGATCAATCAGTTTTTTCTGCCATGAGATGGTGATTCGGTTGCTAGCAGTTTGGGCTGCTTCAACTGTGTTTGCAGGGGTATATGTTGGTGTGCTTTCTGGTTTGATTTCTGCTCCAGTCCAT
Protein sequence	>Msa0910660 MRQSKTLKICANRLIIPMMSMQENVGIEKSCVWHARDSADVNELIDDNYLVKVVLESERVGCIWVFVFCSSVRGSWGLVGYRSISFFCHEMVIRLLAVWAASTVFAGVYVGVLSGLISAPVH