Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0047110 | sp|Q9LU77|PIN2_ARATH | 77.114 | 201 | 46 | 0 | 5 | 205 | 447 | 647 | 1.07e-105 | 320 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0003890 | Msa0047110 | 0.845489 | 3.933884e-59 | -8.615850e-47 |
Msa0006110 | Msa0047110 | 0.805093 | 1.576483e-49 | -8.615850e-47 |
Msa0009180 | Msa0047110 | 0.804535 | 2.061405e-49 | -8.615850e-47 |
Msa0020410 | Msa0047110 | 0.821645 | 3.617100e-53 | -8.615850e-47 |
Msa0021510 | Msa0047110 | 0.801317 | 9.534657e-49 | -8.615850e-47 |
Msa0026710 | Msa0047110 | 0.800124 | 1.669790e-48 | -8.615850e-47 |
Msa0030160 | Msa0047110 | 0.800446 | 1.435899e-48 | -8.615850e-47 |
Msa0036140 | Msa0047110 | 0.800817 | 1.206272e-48 | -8.615850e-47 |
Msa0037570 | Msa0047110 | -0.822092 | 2.849176e-53 | -8.615850e-47 |
Msa0044000 | Msa0047110 | 0.819996 | 8.661351e-53 | -8.615850e-47 |
Msa0044260 | Msa0047110 | 0.825725 | 4.008444e-54 | -8.615850e-47 |
Msa0044330 | Msa0047110 | 0.835911 | 1.273605e-56 | -8.615850e-47 |
Msa0047110 | Msa0054480 | 0.820947 | 5.240739e-53 | -8.615850e-47 |
Msa0047110 | Msa0075470 | 0.801651 | 8.142212e-49 | -8.615850e-47 |
Msa0047110 | Msa0079070 | 0.811184 | 7.948209e-51 | -8.615850e-47 |
Msa0047110 | Msa0079380 | 0.816442 | 5.518422e-52 | -8.615850e-47 |
Msa0047110 | Msa0080090 | 0.809001 | 2.347510e-50 | -8.615850e-47 |
Msa0047110 | Msa0084380 | 0.815081 | 1.109958e-51 | -8.615850e-47 |
Msa0047110 | Msa0090570 | 0.814456 | 1.526614e-51 | -8.615850e-47 |
Msa0047110 | Msa0104240 | 0.812300 | 4.543181e-51 | -8.615850e-47 |
Msa0047110 | Msa0114060 | 0.806780 | 6.965353e-50 | -8.615850e-47 |
Msa0047110 | Msa0127800 | 0.829539 | 4.865048e-55 | -8.615850e-47 |
Msa0047110 | Msa0138020 | 0.817533 | 3.138939e-52 | -8.615850e-47 |
Msa0047110 | Msa0140500 | -0.822951 | 1.799328e-53 | -8.615850e-47 |
Msa0047110 | Msa0148080 | 0.803239 | 3.833145e-49 | -8.615850e-47 |
Msa0047110 | Msa0165210 | 0.808646 | 2.796449e-50 | -8.615850e-47 |
Msa0047110 | Msa0171540 | 0.820532 | 6.525033e-53 | -8.615850e-47 |
Msa0047110 | Msa0180500 | 0.820650 | 6.131657e-53 | -8.615850e-47 |
Msa0047110 | Msa0189040 | 0.824938 | 6.153304e-54 | -8.615850e-47 |
Msa0047110 | Msa0194440 | 0.816235 | 6.138199e-52 | -8.615850e-47 |
Msa0047110 | Msa0211150 | 0.826968 | 2.027051e-54 | -8.615850e-47 |
Msa0047110 | Msa0212990 | 0.808947 | 2.411279e-50 | -8.615850e-47 |
Msa0047110 | Msa0217700 | 0.845451 | 4.027761e-59 | -8.615850e-47 |
Msa0047110 | Msa0218370 | 0.820799 | 5.668058e-53 | -8.615850e-47 |
Msa0047110 | Msa0223010 | 0.802669 | 5.026963e-49 | -8.615850e-47 |
Msa0047110 | Msa0231060 | 0.811860 | 5.668352e-51 | -8.615850e-47 |
Msa0047110 | Msa0241140 | 0.840145 | 1.036885e-57 | -8.615850e-47 |
Msa0047110 | Msa0257520 | 0.807086 | 6.000747e-50 | -8.615850e-47 |
Msa0047110 | Msa0259430 | 0.806466 | 8.116529e-50 | -8.615850e-47 |
Msa0047110 | Msa0265670 | 0.804668 | 1.934089e-49 | -8.615850e-47 |
Msa0047110 | Msa0267370 | 0.828199 | 1.026829e-54 | -8.615850e-47 |
Msa0047110 | Msa0267790 | 0.807022 | 6.193218e-50 | -8.615850e-47 |
Msa0047110 | Msa0271770 | 0.805945 | 1.044936e-49 | -8.615850e-47 |
Msa0047110 | Msa0278580 | 0.819150 | 1.350801e-52 | -8.615850e-47 |
Msa0047110 | Msa0279240 | 0.808331 | 3.264109e-50 | -8.615850e-47 |
Msa0047110 | Msa0280090 | 0.817914 | 2.575399e-52 | -8.615850e-47 |
Msa0047110 | Msa0287870 | 0.812570 | 3.966607e-51 | -8.615850e-47 |
Msa0047110 | Msa0290720 | 0.814876 | 1.232385e-51 | -8.615850e-47 |
Msa0047110 | Msa0290870 | 0.811837 | 5.733647e-51 | -8.615850e-47 |
Msa0047110 | Msa0296480 | 0.806539 | 7.833382e-50 | -8.615850e-47 |
Msa0047110 | Msa0296820 | 0.823020 | 1.734560e-53 | -8.615850e-47 |
Msa0047110 | Msa0305190 | 0.800141 | 1.656751e-48 | -8.615850e-47 |
Msa0047110 | Msa0305410 | 0.813323 | 2.713295e-51 | -8.615850e-47 |
Msa0047110 | Msa0305610 | 0.809961 | 1.460590e-50 | -8.615850e-47 |
Msa0047110 | Msa0307310 | 0.802844 | 4.625362e-49 | -8.615850e-47 |
Msa0047110 | Msa0317970 | 0.807512 | 4.873953e-50 | -8.615850e-47 |
Msa0047110 | Msa0318980 | 0.822243 | 2.628778e-53 | -8.615850e-47 |
Msa0047110 | Msa0330340 | 0.809873 | 1.526101e-50 | -8.615850e-47 |
Msa0047110 | Msa0339620 | 0.805914 | 1.060559e-49 | -8.615850e-47 |
Msa0047110 | Msa0343850 | 0.800802 | 1.214855e-48 | -8.615850e-47 |
Msa0047110 | Msa0363790 | 0.831912 | 1.275532e-55 | -8.615850e-47 |
Msa0047110 | Msa0367870 | 0.812944 | 3.284774e-51 | -8.615850e-47 |
Msa0047110 | Msa0381610 | -0.820367 | 7.119854e-53 | -8.615850e-47 |
Msa0047110 | Msa0393620 | 0.804132 | 2.501756e-49 | -8.615850e-47 |
Msa0047110 | Msa0403640 | 0.803994 | 2.672175e-49 | -8.615850e-47 |
Msa0047110 | Msa0405130 | 0.827128 | 1.856130e-54 | -8.615850e-47 |
Msa0047110 | Msa0411390 | 0.808164 | 3.542784e-50 | -8.615850e-47 |
Msa0047110 | Msa0413410 | 0.811197 | 7.896026e-51 | -8.615850e-47 |
Msa0047110 | Msa0416650 | 0.803974 | 2.697883e-49 | -8.615850e-47 |
Msa0047110 | Msa0417210 | 0.806397 | 8.391128e-50 | -8.615850e-47 |
Msa0047110 | Msa0417330 | 0.829882 | 4.014024e-55 | -8.615850e-47 |
Msa0047110 | Msa0422090 | 0.800381 | 1.480035e-48 | -8.615850e-47 |
Msa0047110 | Msa0425170 | 0.828216 | 1.016959e-54 | -8.615850e-47 |
Msa0047110 | Msa0428080 | 0.815164 | 1.063539e-51 | -8.615850e-47 |
Msa0047110 | Msa0434180 | 0.818091 | 2.348665e-52 | -8.615850e-47 |
Msa0047110 | Msa0440400 | 0.802756 | 4.824206e-49 | -8.615850e-47 |
Msa0047110 | Msa0440750 | 0.805792 | 1.124738e-49 | -8.615850e-47 |
Msa0047110 | Msa0454360 | 0.801618 | 8.272397e-49 | -8.615850e-47 |
Msa0047110 | Msa0455760 | 0.826252 | 3.003758e-54 | -8.615850e-47 |
Msa0047110 | Msa0464100 | 0.803491 | 3.399526e-49 | -8.615850e-47 |
Msa0047110 | Msa0464680 | 0.822909 | 1.840079e-53 | -8.615850e-47 |
Msa0047110 | Msa0466410 | 0.811909 | 5.530584e-51 | -8.615850e-47 |
Msa0047110 | Msa0479340 | 0.805422 | 1.345328e-49 | -8.615850e-47 |
Msa0047110 | Msa0481530 | 0.803131 | 4.034612e-49 | -8.615850e-47 |
Msa0047110 | Msa0506670 | 0.811297 | 7.513460e-51 | -8.615850e-47 |
Msa0047110 | Msa0510930 | 0.807945 | 3.943875e-50 | -8.615850e-47 |
Msa0047110 | Msa0518380 | 0.800271 | 1.558885e-48 | -8.615850e-47 |
Msa0047110 | Msa0521670 | 0.806537 | 7.838197e-50 | -8.615850e-47 |
Msa0047110 | Msa0529890 | 0.827318 | 1.671250e-54 | -8.615850e-47 |
Msa0047110 | Msa0530560 | 0.809097 | 2.238850e-50 | -8.615850e-47 |
Msa0047110 | Msa0532990 | 0.821103 | 4.822584e-53 | -8.615850e-47 |
Msa0047110 | Msa0545700 | 0.825307 | 5.034329e-54 | -8.615850e-47 |
Msa0047110 | Msa0545850 | 0.800538 | 1.375418e-48 | -8.615850e-47 |
Msa0047110 | Msa0548920 | 0.814037 | 1.888781e-51 | -8.615850e-47 |
Msa0047110 | Msa0585560 | 0.817146 | 3.836114e-52 | -8.615850e-47 |
Msa0047110 | Msa0594560 | 0.817089 | 3.951559e-52 | -8.615850e-47 |
Msa0047110 | Msa0607910 | 0.822725 | 2.031592e-53 | -8.615850e-47 |
Msa0047110 | Msa0610840 | -0.800110 | 1.680695e-48 | -8.615850e-47 |
Msa0047110 | Msa0613110 | 0.807053 | 6.097811e-50 | -8.615850e-47 |
Msa0047110 | Msa0625720 | 0.822358 | 2.472291e-53 | -8.615850e-47 |
Msa0047110 | Msa0631360 | 0.803433 | 3.494161e-49 | -8.615850e-47 |
Msa0047110 | Msa0649110 | 0.819155 | 1.347354e-52 | -8.615850e-47 |
Msa0047110 | Msa0661650 | 0.822632 | 2.135358e-53 | -8.615850e-47 |
Msa0047110 | Msa0663390 | 0.814929 | 1.199407e-51 | -8.615850e-47 |
Msa0047110 | Msa0681250 | 0.814756 | 1.310319e-51 | -8.615850e-47 |
Msa0047110 | Msa0681270 | 0.804120 | 2.515436e-49 | -8.615850e-47 |
Msa0047110 | Msa0688390 | 0.803802 | 2.929970e-49 | -8.615850e-47 |
Msa0047110 | Msa0690860 | 0.839254 | 1.769017e-57 | -8.615850e-47 |
Msa0047110 | Msa0697030 | 0.801027 | 1.092581e-48 | -8.615850e-47 |
Msa0047110 | Msa0705970 | 0.805823 | 1.108409e-49 | -8.615850e-47 |
Msa0047110 | Msa0707250 | 0.826817 | 2.203475e-54 | -8.615850e-47 |
Msa0047110 | Msa0711150 | 0.860330 | 2.227588e-63 | -8.615850e-47 |
Msa0047110 | Msa0717890 | 0.825378 | 4.842671e-54 | -8.615850e-47 |
Msa0047110 | Msa0731940 | 0.812023 | 5.221263e-51 | -8.615850e-47 |
Msa0047110 | Msa0733010 | 0.809590 | 1.754771e-50 | -8.615850e-47 |
Msa0047110 | Msa0738030 | 0.803168 | 3.965716e-49 | -8.615850e-47 |
Msa0047110 | Msa0741070 | 0.803879 | 2.823824e-49 | -8.615850e-47 |
Msa0047110 | Msa0743930 | 0.807693 | 4.462051e-50 | -8.615850e-47 |
Msa0047110 | Msa0755050 | 0.834735 | 2.524183e-56 | -8.615850e-47 |
Msa0047110 | Msa0755180 | 0.808227 | 3.435547e-50 | -8.615850e-47 |
Msa0047110 | Msa0768370 | 0.813119 | 3.007575e-51 | -8.615850e-47 |
Msa0047110 | Msa0778710 | 0.801384 | 9.234764e-49 | -8.615850e-47 |
Msa0047110 | Msa0796980 | 0.804674 | 1.928296e-49 | -8.615850e-47 |
Msa0047110 | Msa0797250 | 0.830695 | 2.540441e-55 | -8.615850e-47 |
Msa0047110 | Msa0800790 | 0.806223 | 9.128748e-50 | -8.615850e-47 |
Msa0047110 | Msa0805960 | 0.806950 | 6.412585e-50 | -8.615850e-47 |
Msa0047110 | Msa0806120 | 0.800434 | 1.444048e-48 | -8.615850e-47 |
Msa0047110 | Msa0808080 | 0.811717 | 6.088208e-51 | -8.615850e-47 |
Msa0047110 | Msa0817460 | 0.820917 | 5.323361e-53 | -8.615850e-47 |
Msa0047110 | Msa0820850 | 0.810832 | 9.475857e-51 | -8.615850e-47 |
Msa0047110 | Msa0822500 | 0.810008 | 1.427093e-50 | -8.615850e-47 |
Msa0047110 | Msa0827250 | 0.809925 | 1.486761e-50 | -8.615850e-47 |
Msa0047110 | Msa0830230 | 0.830009 | 3.738287e-55 | -8.615850e-47 |
Msa0047110 | Msa0831110 | 0.834716 | 2.552075e-56 | -8.615850e-47 |
Msa0047110 | Msa0831850 | 0.817452 | 3.273548e-52 | -8.615850e-47 |
Msa0047110 | Msa0832340 | 0.827005 | 1.986280e-54 | -8.615850e-47 |
Msa0047110 | Msa0835800 | 0.817314 | 3.516057e-52 | -8.615850e-47 |
Msa0047110 | Msa0842790 | 0.816668 | 4.910537e-52 | -8.615850e-47 |
Msa0047110 | Msa0844450 | 0.818342 | 2.061126e-52 | -8.615850e-47 |
Msa0047110 | Msa0844490 | 0.828650 | 7.988697e-55 | -8.615850e-47 |
Msa0047110 | Msa0846860 | 0.802501 | 5.445941e-49 | -8.615850e-47 |
Msa0047110 | Msa0849030 | 0.825698 | 4.068278e-54 | -8.615850e-47 |
Msa0047110 | Msa0857940 | 0.811070 | 8.414665e-51 | -8.615850e-47 |
Msa0047110 | Msa0858130 | 0.824345 | 8.488701e-54 | -8.615850e-47 |
Msa0047110 | Msa0861130 | 0.812668 | 3.776738e-51 | -8.615850e-47 |
Msa0047110 | Msa0875290 | 0.812687 | 3.740059e-51 | -8.615850e-47 |
Msa0047110 | Msa0876810 | 0.804590 | 2.007756e-49 | -8.615850e-47 |
Msa0047110 | Msa0894710 | 0.816575 | 5.152229e-52 | -8.615850e-47 |
Msa0047110 | Msa0896890 | 0.801248 | 9.848417e-49 | -8.615850e-47 |
Msa0047110 | Msa0897330 | 0.848739 | 5.057510e-60 | -8.615850e-47 |
Msa0047110 | Msa0898750 | 0.823367 | 1.439344e-53 | -8.615850e-47 |
Msa0047110 | Msa0899430 | 0.800301 | 1.536565e-48 | -8.615850e-47 |
Msa0047110 | Msa0901400 | 0.818226 | 2.189630e-52 | -8.615850e-47 |
Msa0047110 | Msa0901930 | 0.804437 | 2.161122e-49 | -8.615850e-47 |
Msa0047110 | Msa0910660 | 0.803281 | 3.757728e-49 | -8.615850e-47 |
Msa0047110 | Msa0914270 | 0.814765 | 1.304343e-51 | -8.615850e-47 |
Msa0047110 | Msa0925290 | 0.800226 | 1.591556e-48 | -8.615850e-47 |
Msa0047110 | Msa0927380 | 0.828478 | 8.792144e-55 | -8.615850e-47 |
Msa0047110 | Msa0928130 | 0.824310 | 8.652078e-54 | -8.615850e-47 |
Msa0047110 | Msa0936390 | 0.819272 | 1.267052e-52 | -8.615850e-47 |
Msa0047110 | Msa0938220 | 0.808468 | 3.051640e-50 | -8.615850e-47 |
Msa0047110 | Msa0939140 | 0.800926 | 1.146128e-48 | -8.615850e-47 |
Msa0047110 | Msa0943190 | 0.801962 | 7.027758e-49 | -8.615850e-47 |
Msa0047110 | Msa0958550 | 0.800804 | 1.213575e-48 | -8.615850e-47 |
Msa0047110 | Msa0964310 | 0.837164 | 6.109342e-57 | -8.615850e-47 |
Msa0047110 | Msa0964900 | 0.809115 | 2.219843e-50 | -8.615850e-47 |
Msa0047110 | Msa0969600 | 0.803819 | 2.905266e-49 | -8.615850e-47 |
Msa0047110 | Msa0969810 | 0.818706 | 1.704389e-52 | -8.615850e-47 |
Msa0047110 | Msa0974080 | 0.842582 | 2.367653e-58 | -8.615850e-47 |
Msa0047110 | Msa0975320 | 0.802702 | 4.948138e-49 | -8.615850e-47 |
Msa0047110 | Msa0985560 | 0.804032 | 2.624371e-49 | -8.615850e-47 |
Msa0047110 | Msa0989360 | 0.831745 | 1.402459e-55 | -8.615850e-47 |
Msa0047110 | Msa0989620 | 0.825635 | 4.210287e-54 | -8.615850e-47 |
Msa0047110 | Msa0997370 | 0.809072 | 2.267218e-50 | -8.615850e-47 |
Msa0047110 | Msa0999870 | 0.811870 | 5.640240e-51 | -8.615850e-47 |
Msa0047110 | Msa1001180 | 0.814455 | 1.527398e-51 | -8.615850e-47 |
Msa0047110 | Msa1001390 | 0.802538 | 5.349993e-49 | -8.615850e-47 |
Msa0047110 | Msa1002000 | 0.814534 | 1.467168e-51 | -8.615850e-47 |
Msa0047110 | Msa1002850 | 0.802752 | 4.832450e-49 | -8.615850e-47 |
Msa0047110 | Msa1016320 | 0.804281 | 2.329638e-49 | -8.615850e-47 |
Msa0047110 | Msa1017350 | 0.827356 | 1.636621e-54 | -8.615850e-47 |
Msa0047110 | Msa1019000 | 0.808570 | 2.902779e-50 | -8.615850e-47 |
Msa0047110 | Msa1023950 | 0.809082 | 2.255767e-50 | -8.615850e-47 |
Msa0047110 | Msa1035480 | 0.813383 | 2.631236e-51 | -8.615850e-47 |
Msa0047110 | Msa1048220 | 0.838568 | 2.661532e-57 | -8.615850e-47 |
Msa0047110 | Msa1065010 | 0.800320 | 1.523081e-48 | -8.615850e-47 |
Msa0047110 | Msa1075540 | 0.819733 | 9.947348e-53 | -8.615850e-47 |
Msa0047110 | Msa1075650 | 0.841597 | 4.314011e-58 | -8.615850e-47 |
Msa0047110 | Msa1076700 | 0.804783 | 1.830055e-49 | -8.615850e-47 |
Msa0047110 | Msa1083840 | 0.800463 | 1.424519e-48 | -8.615850e-47 |
Msa0047110 | Msa1089460 | 0.814427 | 1.549368e-51 | -8.615850e-47 |
Msa0047110 | Msa1100050 | 0.824187 | 9.246870e-54 | -8.615850e-47 |
Msa0047110 | Msa1101090 | 0.849921 | 2.371096e-60 | -8.615850e-47 |
Msa0047110 | Msa1103180 | 0.817071 | 3.987156e-52 | -8.615850e-47 |
Msa0047110 | Msa1104090 | 0.832460 | 9.333374e-56 | -8.615850e-47 |
Msa0047110 | Msa1104560 | 0.806379 | 8.463656e-50 | -8.615850e-47 |
Msa0047110 | Msa1108760 | 0.813525 | 2.448862e-51 | -8.615850e-47 |
Msa0047110 | Msa1109680 | 0.814130 | 1.801897e-51 | -8.615850e-47 |
Msa0047110 | Msa1113170 | 0.831258 | 1.848622e-55 | -8.615850e-47 |
Msa0047110 | Msa1115100 | 0.825700 | 4.061976e-54 | -8.615850e-47 |
Msa0047110 | Msa1119480 | 0.803999 | 2.666363e-49 | -8.615850e-47 |
Msa0047110 | Msa1120610 | 0.803991 | 2.675982e-49 | -8.615850e-47 |
Msa0047110 | Msa1121480 | 0.819433 | 1.164700e-52 | -8.615850e-47 |
Msa0047110 | Msa1121490 | 0.846553 | 2.020743e-59 | -8.615850e-47 |
Msa0047110 | Msa1135470 | 0.814950 | 1.186308e-51 | -8.615850e-47 |
Msa0047110 | Msa1137570 | 0.814582 | 1.431725e-51 | -8.615850e-47 |
Msa0047110 | Msa1142020 | 0.807511 | 4.877258e-50 | -8.615850e-47 |
Msa0047110 | Msa1142670 | 0.822578 | 2.198270e-53 | -8.615850e-47 |
Msa0047110 | Msa1148000 | 0.802290 | 6.018849e-49 | -8.615850e-47 |
Msa0047110 | Msa1155170 | -0.809257 | 2.069549e-50 | -8.615850e-47 |
Msa0047110 | Msa1162780 | 0.836406 | 9.537355e-57 | -8.615850e-47 |
Msa0047110 | Msa1163090 | 0.813297 | 2.748228e-51 | -8.615850e-47 |
Msa0047110 | Msa1174040 | 0.818033 | 2.421209e-52 | -8.615850e-47 |
Msa0047110 | Msa1174910 | 0.820579 | 6.367897e-53 | -8.615850e-47 |
Msa0047110 | Msa1181250 | 0.812735 | 3.651324e-51 | -8.615850e-47 |
Msa0047110 | Msa1181330 | 0.812716 | 3.685616e-51 | -8.615850e-47 |
Msa0047110 | Msa1181910 | 0.823451 | 1.375602e-53 | -8.615850e-47 |
Msa0047110 | Msa1185110 | 0.814533 | 1.467998e-51 | -8.615850e-47 |
Msa0047110 | Msa1194160 | 0.811814 | 5.800580e-51 | -8.615850e-47 |
Msa0047110 | Msa1204630 | 0.800653 | 1.303153e-48 | -8.615850e-47 |
Msa0047110 | Msa1211230 | -0.807161 | 5.786492e-50 | -8.615850e-47 |
Msa0047110 | Msa1232700 | 0.807509 | 4.882997e-50 | -8.615850e-47 |
Msa0047110 | Msa1232740 | 0.825582 | 4.333041e-54 | -8.615850e-47 |
Msa0047110 | Msa1238820 | 0.804367 | 2.234643e-49 | -8.615850e-47 |
Msa0047110 | Msa1242670 | 0.812090 | 5.050714e-51 | -8.615850e-47 |
Msa0047110 | Msa1243490 | 0.812355 | 4.421141e-51 | -8.615850e-47 |
Msa0047110 | Msa1271130 | 0.803185 | 3.933789e-49 | -8.615850e-47 |
Msa0047110 | Msa1274560 | 0.814395 | 1.574538e-51 | -8.615850e-47 |
Msa0047110 | Msa1275590 | 0.808783 | 2.614216e-50 | -8.615850e-47 |
Msa0047110 | Msa1276600 | 0.808764 | 2.638230e-50 | -8.615850e-47 |
Msa0047110 | Msa1276890 | 0.837901 | 3.953838e-57 | -8.615850e-47 |
Msa0047110 | Msa1277660 | 0.805416 | 1.349322e-49 | -8.615850e-47 |
Msa0047110 | Msa1285550 | 0.801112 | 1.049695e-48 | -8.615850e-47 |
Msa0047110 | Msa1286800 | 0.807343 | 5.295136e-50 | -8.615850e-47 |
Msa0047110 | Msa1287460 | 0.806395 | 8.400498e-50 | -8.615850e-47 |
Msa0047110 | Msa1302830 | 0.800850 | 1.187767e-48 | -8.615850e-47 |
Msa0047110 | Msa1305810 | 0.810363 | 1.196294e-50 | -8.615850e-47 |
Msa0047110 | Msa1308870 | 0.828258 | 9.935042e-55 | -8.615850e-47 |
Msa0047110 | Msa1313320 | 0.825639 | 4.200735e-54 | -8.615850e-47 |
Msa0047110 | Msa1331000 | 0.819555 | 1.091965e-52 | -8.615850e-47 |
Msa0047110 | Msa1353470 | 0.805399 | 1.360393e-49 | -8.615850e-47 |
Msa0047110 | Msa1355180 | 0.804647 | 1.954254e-49 | -8.615850e-47 |
Msa0047110 | Msa1355890 | 0.806082 | 9.777099e-50 | -8.615850e-47 |
Msa0047110 | Msa1358500 | 0.801768 | 7.704628e-49 | -8.615850e-47 |
Msa0047110 | Msa1370070 | -0.820427 | 6.899803e-53 | -8.615850e-47 |
Msa0047110 | Msa1375380 | 0.801563 | 8.487564e-49 | -8.615850e-47 |
Msa0047110 | Msa1380220 | 0.846116 | 2.658540e-59 | -8.615850e-47 |
Msa0047110 | Msa1388930 | 0.806748 | 7.076598e-50 | -8.615850e-47 |
Msa0047110 | Msa1388970 | 0.800300 | 1.537424e-48 | -8.615850e-47 |
Msa0047110 | Msa1389880 | 0.801572 | 8.452208e-49 | -8.615850e-47 |
Msa0047110 | Msa1392240 | 0.811718 | 6.084382e-51 | -8.615850e-47 |
Msa0047110 | Msa1392780 | 0.801951 | 7.064803e-49 | -8.615850e-47 |
Msa0047110 | Msa1393570 | 0.811934 | 5.460864e-51 | -8.615850e-47 |
Msa0047110 | Msa1394350 | 0.849005 | 4.267484e-60 | -8.615850e-47 |
Msa0047110 | Msa1394380 | 0.818256 | 2.155534e-52 | -8.615850e-47 |
Msa0047110 | Msa1410680 | 0.835645 | 1.487141e-56 | -8.615850e-47 |
Msa0047110 | Msa1412130 | 0.813813 | 2.116416e-51 | -8.615850e-47 |
Msa0047110 | Msa1412530 | 0.823661 | 1.228385e-53 | -8.615850e-47 |
Msa0047110 | Msa1412640 | 0.806871 | 6.663259e-50 | -8.615850e-47 |
Msa0047110 | Msa1419690 | 0.800312 | 1.528689e-48 | -8.615850e-47 |
Msa0047110 | Msa1424750 | 0.802514 | 5.410754e-49 | -8.615850e-47 |
Msa0047110 | Msa1425260 | 0.817566 | 3.085686e-52 | -8.615850e-47 |
Msa0047110 | Msa1427230 | 0.812827 | 3.486012e-51 | -8.615850e-47 |
Msa0047110 | Msa1440310 | 0.821038 | 4.993766e-53 | -8.615850e-47 |
Msa0047110 | Msa1440560 | 0.818088 | 2.352460e-52 | -8.615850e-47 |
Msa0047110 | Msa1442920 | 0.801712 | 7.909927e-49 | -8.615850e-47 |
Msa0047110 | Msa1445390 | -0.821685 | 3.540004e-53 | -8.615850e-47 |
Msa0047110 | Msa1448560 | 0.823505 | 1.335905e-53 | -8.615850e-47 |
Msa0047110 | Msa1449340 | -0.821025 | 5.027367e-53 | -8.615850e-47 |
Msa0047110 | Msa1452710 | 0.807874 | 4.083588e-50 | -8.615850e-47 |
Msa0047110 | Msa1458680 | 0.811870 | 5.640393e-51 | -8.615850e-47 |
Msa0047110 | Msa1458770 | 0.815152 | 1.070440e-51 | -8.615850e-47 |
Msa0047110 | Msa1460830 | 0.813577 | 2.385052e-51 | -8.615850e-47 |
Msa0047110 | Msa1462360 | 0.806591 | 7.638471e-50 | -8.615850e-47 |
Msa0047110 | Msa1463900 | 0.808594 | 2.868683e-50 | -8.615850e-47 |
Msa0047110 | Msa1464810 | 0.804838 | 1.782805e-49 | -8.615850e-47 |
Msa0047110 | Msa1466540 | 0.838209 | 3.295007e-57 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0047110 | MtrunA17_Chr4g0071571 | 98.049 | 205 | 4 | 0 | 1 | 205 | 421 | 625 | 5.89e-140 | 404 |
Msa0047110 | MtrunA17_Chr4g0071561 | 82.222 | 180 | 32 | 0 | 2 | 181 | 137 | 316 | 1.10e-106 | 309 |
Msa0047110 | MtrunA17_Chr6g0478431 | 82.143 | 168 | 30 | 0 | 38 | 205 | 437 | 604 | 3.46e-96 | 291 |
Msa0047110 | MtrunA17_Chr1g0160461 | 79.213 | 178 | 37 | 0 | 28 | 205 | 444 | 621 | 1.74e-95 | 290 |
Msa0047110 | MtrunA17_Chr4g0044181 | 82.249 | 169 | 30 | 0 | 37 | 205 | 491 | 659 | 4.95e-95 | 290 |
Msa0047110 | MtrunA17_Chr7g0255941 | 72.139 | 201 | 53 | 1 | 8 | 205 | 391 | 591 | 1.10e-94 | 287 |
Msa0047110 | MtrunA17_Chr1g0159341 | 59.024 | 205 | 81 | 1 | 1 | 205 | 326 | 527 | 2.69e-72 | 228 |
Msa0047110 | MtrunA17_Chr8g0393111 | 64.804 | 179 | 35 | 2 | 20 | 175 | 344 | 517 | 2.67e-71 | 226 |
Msa0047110 | MtrunA17_Chr7g0216571 | 51.244 | 201 | 88 | 2 | 5 | 205 | 177 | 367 | 6.67e-63 | 199 |
Msa0047110 | MtrunA17_Chr6g0452821 | 50.538 | 186 | 92 | 0 | 20 | 205 | 175 | 360 | 1.82e-62 | 197 |
Msa0047110 | MtrunA17_Chr7g0249141 | 44.898 | 196 | 96 | 2 | 15 | 203 | 169 | 359 | 4.94e-56 | 181 |
Msa0047110 | MtrunA17_Chr2g0298971 | 45.714 | 210 | 76 | 4 | 5 | 184 | 316 | 517 | 1.91e-50 | 170 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0047110 | AT5G57090.2 | 77.114 | 201 | 46 | 0 | 5 | 205 | 347 | 547 | 5.59e-108 | 320 |
Msa0047110 | AT5G57090.1 | 77.114 | 201 | 46 | 0 | 5 | 205 | 447 | 647 | 1.09e-106 | 320 |
Msa0047110 | AT1G70940.1 | 73.171 | 205 | 51 | 2 | 4 | 205 | 437 | 640 | 7.83e-93 | 284 |
Msa0047110 | AT2G01420.2 | 69.118 | 204 | 60 | 1 | 5 | 205 | 413 | 616 | 1.75e-92 | 283 |
Msa0047110 | AT2G01420.1 | 69.118 | 204 | 60 | 1 | 5 | 205 | 409 | 612 | 1.96e-92 | 282 |
Msa0047110 | AT1G23080.3 | 79.882 | 169 | 34 | 0 | 37 | 205 | 447 | 615 | 2.59e-88 | 272 |
Msa0047110 | AT1G23080.4 | 79.882 | 169 | 34 | 0 | 37 | 205 | 447 | 615 | 2.59e-88 | 272 |
Msa0047110 | AT1G23080.1 | 79.882 | 169 | 34 | 0 | 37 | 205 | 451 | 619 | 3.34e-88 | 271 |
Msa0047110 | AT1G73590.1 | 67.488 | 203 | 61 | 3 | 8 | 205 | 420 | 622 | 4.31e-83 | 258 |
Msa0047110 | AT1G77110.1 | 57.339 | 218 | 76 | 3 | 2 | 205 | 356 | 570 | 4.41e-77 | 241 |
Msa0047110 | AT1G77110.2 | 55.612 | 196 | 70 | 3 | 2 | 183 | 356 | 548 | 8.01e-65 | 209 |
Msa0047110 | AT5G15100.1 | 58.025 | 162 | 68 | 0 | 42 | 203 | 204 | 365 | 8.22e-62 | 196 |
Msa0047110 | AT5G16530.1 | 51.282 | 156 | 76 | 0 | 48 | 203 | 192 | 347 | 1.13e-54 | 178 |
Msa0047110 | AT5G16530.2 | 50.365 | 137 | 68 | 0 | 48 | 184 | 192 | 328 | 3.82e-46 | 155 |
Msa0047110 | AT2G01420.3 | 61.538 | 104 | 37 | 1 | 5 | 105 | 413 | 516 | 6.76e-33 | 124 |
Msa0047110 | AT1G23080.2 | 81.159 | 69 | 13 | 0 | 37 | 105 | 447 | 515 | 2.02e-31 | 119 |
Find 72 sgRNAs with CRISPR-Local
Find 190 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GACAAATTATTAACAAATAA+AGG | 0.197004 | 1_1:-79786393 | None:intergenic |
CACCCAGTGCTGAGTATATT+TGG | 0.231032 | 1_1:-79785968 | None:intergenic |
GAAATGCCATCTATTGTAAA+AGG | 0.235112 | 1_1:+79785472 | Msa0047110:CDS |
TTTGGTCTCTTGTATCATTT+AGG | 0.244094 | 1_1:+79785342 | Msa0047110:CDS |
ATAAGACTTGAGTAGGTATT+AGG | 0.244249 | 1_1:-79785311 | None:intergenic |
AATACCTACTCAAGTCTTAT+AGG | 0.254018 | 1_1:+79785314 | Msa0047110:CDS |
CTTCCAAGTCCATCTTCTTC+TGG | 0.279820 | 1_1:-79785193 | None:intergenic |
GTTACATGTTGCAATTGTTC+AGG | 0.321229 | 1_1:+79785783 | Msa0047110:CDS |
ATCTTCTTCTGGCTAATATA+TGG | 0.325305 | 1_1:-79785182 | None:intergenic |
ACAAATTATTAACAAATAAA+GGG | 0.325575 | 1_1:-79786392 | None:intergenic |
ATACTCTACTATGTGCTTCT+TGG | 0.327447 | 1_1:+79786137 | Msa0047110:CDS |
TGGATGGAGATTGTATTCTT+TGG | 0.334269 | 1_1:-79785948 | None:intergenic |
CACATAGTAGAGTATTGTTA+TGG | 0.345910 | 1_1:-79786129 | None:intergenic |
GACTTATCCTTATCATGGTT+TGG | 0.355082 | 1_1:+79785270 | Msa0047110:CDS |
GTGTGCTGCAGGGTTATATT+TGG | 0.369222 | 1_1:+79786089 | Msa0047110:intron |
GGGAATGGAGATTGATCATC+TGG | 0.381929 | 1_1:-79786371 | None:intergenic |
CAAGTCTTATAGGACTTGTT+TGG | 0.388260 | 1_1:+79785324 | Msa0047110:CDS |
CTTTGCAACAACAGTGTACT+AGG | 0.389815 | 1_1:-79784982 | None:intergenic |
TCTTGGAGTATAGTCTATCT+TGG | 0.400664 | 1_1:+79786154 | Msa0047110:exon |
AGATGGACTTGGAAGGAGGA+GGG | 0.406669 | 1_1:+79785201 | Msa0047110:CDS |
GATTAATGCTTTCCTGTACA+TGG | 0.422389 | 1_1:+79785004 | Msa0047110:five_prime_UTR |
AGAAAGGGATGTTGAAATTG+AGG | 0.424348 | 1_1:+79785145 | Msa0047110:CDS |
ATTATGATGTTGTGGCTTCA+AGG | 0.425520 | 1_1:+79786187 | Msa0047110:three_prime_UTR |
GACAAGACTTATCCTTATCA+TGG | 0.432617 | 1_1:+79785265 | Msa0047110:CDS |
ATACTGTCTGATGCTGGTCT+TGG | 0.436774 | 1_1:+79785505 | Msa0047110:CDS |
ATTTGTTAATAATTTGTCAA+TGG | 0.444644 | 1_1:+79786398 | Msa0047110:three_prime_UTR |
TTTCCTGTACATGGTCATCT+TGG | 0.448871 | 1_1:+79785013 | Msa0047110:five_prime_UTR |
TTTCCACATGCAATCAGCTT+AGG | 0.449414 | 1_1:-79785667 | None:intergenic |
AGTCTTGTCATGACACTTGC+TGG | 0.450412 | 1_1:-79785251 | None:intergenic |
AAGATGGACTTGGAAGGAGG+AGG | 0.460717 | 1_1:+79785200 | Msa0047110:CDS |
ACGGATACCAATTGCTATTG+AGG | 0.461284 | 1_1:-79785752 | None:intergenic |
CACAAAGGGAACGATACCTT+GGG | 0.473023 | 1_1:-79785921 | None:intergenic |
ATCTCAATACTGTCTGATGC+TGG | 0.484824 | 1_1:+79785499 | Msa0047110:CDS |
GATGGACTTGGAAGGAGGAG+GGG | 0.487071 | 1_1:+79785202 | Msa0047110:CDS |
GGCTCATTCAAACAAATGAA+TGG | 0.492041 | 1_1:+79786209 | Msa0047110:three_prime_UTR |
GCGGCAACCTCAATAGCAAT+TGG | 0.493077 | 1_1:+79785745 | Msa0047110:CDS |
ACATAGTAGAGTATTGTTAT+GGG | 0.493323 | 1_1:-79786128 | None:intergenic |
TTATGATGTTGTGGCTTCAA+GGG | 0.499264 | 1_1:+79786188 | Msa0047110:three_prime_UTR |
TATTCTTTGGCAAACACAAA+GGG | 0.501329 | 1_1:-79785935 | None:intergenic |
AGAACATGAGTCTTAGAGAA+AGG | 0.505648 | 1_1:+79785129 | Msa0047110:exon |
ATATATTAGCCAGAAGAAGA+TGG | 0.507802 | 1_1:+79785184 | Msa0047110:CDS |
ACACAAAGGGAACGATACCT+TGG | 0.508083 | 1_1:-79785922 | None:intergenic |
CATCCAAATATACTCAGCAC+TGG | 0.523771 | 1_1:+79785965 | Msa0047110:CDS |
TGCCGCAATCACAGTTGGAC+CGG | 0.524372 | 1_1:-79785728 | None:intergenic |
GAACATGAGTCTTAGAGAAA+GGG | 0.530157 | 1_1:+79785130 | Msa0047110:exon |
GTCTGATGCTGGTCTTGGAA+TGG | 0.532632 | 1_1:+79785510 | Msa0047110:CDS |
ATGGCTGTTAGGTTCTTGAC+CGG | 0.534223 | 1_1:+79785709 | Msa0047110:CDS |
TAGCCAGAAGAAGATGGACT+TGG | 0.535792 | 1_1:+79785190 | Msa0047110:CDS |
TATTAACAAATAAAGGGGAA+TGG | 0.537959 | 1_1:-79786386 | None:intergenic |
GAGGTTGCCGCAATCACAGT+TGG | 0.546063 | 1_1:-79785733 | None:intergenic |
GACCGGTCCAACTGTGATTG+CGG | 0.556573 | 1_1:+79785726 | Msa0047110:CDS |
CTACCAAGATGACCATGTAC+AGG | 0.574684 | 1_1:-79785016 | None:intergenic |
GCAAATCAATTATGATGTTG+TGG | 0.575994 | 1_1:+79786179 | Msa0047110:three_prime_UTR |
TCATCTTGGTAGTACAAGAA+AGG | 0.579337 | 1_1:+79785027 | Msa0047110:five_prime_UTR |
AAGTCCTATAAGACTTGAGT+AGG | 0.579378 | 1_1:-79785318 | None:intergenic |
CAAATTATTAACAAATAAAG+GGG | 0.580350 | 1_1:-79786391 | None:intergenic |
TCAATAGCAATTGGTATCCG+TGG | 0.585503 | 1_1:+79785754 | Msa0047110:CDS |
AGCATCAGACAGTATTGAGA+TGG | 0.585685 | 1_1:-79785497 | None:intergenic |
CAGTGCTGAGTATATTTGGA+TGG | 0.585744 | 1_1:-79785964 | None:intergenic |
CAACCTAAGCTGATTGCATG+TGG | 0.587393 | 1_1:+79785664 | Msa0047110:CDS |
GTATTCTTTGGCAAACACAA+AGG | 0.589188 | 1_1:-79785936 | None:intergenic |
ATATTGAATTCTATTAGAGA+AGG | 0.604979 | 1_1:+79786254 | Msa0047110:three_prime_UTR |
AGATTGATCATCTGGAAATG+TGG | 0.610600 | 1_1:-79786363 | None:intergenic |
CAGAAGAAGATGGACTTGGA+AGG | 0.618184 | 1_1:+79785194 | Msa0047110:CDS |
AAGAAGATGGACTTGGAAGG+AGG | 0.619267 | 1_1:+79785197 | Msa0047110:CDS |
GATTGATCATCTGGAAATGT+GGG | 0.623047 | 1_1:-79786362 | None:intergenic |
TTGCAGGCTGCACTTCCCCA+AGG | 0.623512 | 1_1:+79785905 | Msa0047110:intron |
ATCCAAATATACTCAGCACT+GGG | 0.630722 | 1_1:+79785966 | Msa0047110:CDS |
ATAAGTACTTACACTGAACA+TGG | 0.642188 | 1_1:-79785533 | None:intergenic |
CTTGTCATGACACTTGCTGG+TGG | 0.653465 | 1_1:-79785248 | None:intergenic |
CAACATGTAACAGAACTCCA+CGG | 0.711215 | 1_1:-79785771 | None:intergenic |
ACAAAGGGAACGATACCTTG+GGG | 0.759468 | 1_1:-79785920 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ACAAATTATTAACAAATAAA+GGG | - | chr1_1:79786395-79786414 | None:intergenic | 10.0% |
!! | ACAAATTATTAACAAATAAA+GGG | - | chr1_1:79786395-79786414 | None:intergenic | 10.0% |
!!! | TAATAGATTGAAGATTTTTT+TGG | - | chr1_1:79785388-79785407 | None:intergenic | 15.0% |
!!! | TTTATTATGAATTTTTATGC+AGG | + | chr1_1:79785625-79785644 | Msa0047110:intron | 15.0% |
!! | ATAAACAACTAATTAGAATA+AGG | - | chr1_1:79785860-79785879 | None:intergenic | 15.0% |
!!! | AATGTTTAATTTTAATTTGC+AGG | + | chr1_1:79785889-79785908 | Msa0047110:intron | 15.0% |
!! | CAAATTATTAACAAATAAAG+GGG | - | chr1_1:79786394-79786413 | None:intergenic | 15.0% |
!! | GACAAATTATTAACAAATAA+AGG | - | chr1_1:79786396-79786415 | None:intergenic | 15.0% |
!!! | ATTTGTTAATAATTTGTCAA+TGG | + | chr1_1:79786398-79786417 | Msa0047110:three_prime_UTR | 15.0% |
!!! | TAATAGATTGAAGATTTTTT+TGG | - | chr1_1:79785388-79785407 | None:intergenic | 15.0% |
!!! | TTTATTATGAATTTTTATGC+AGG | + | chr1_1:79785625-79785644 | Msa0047110:intron | 15.0% |
!! | ATAAACAACTAATTAGAATA+AGG | - | chr1_1:79785860-79785879 | None:intergenic | 15.0% |
!!! | AATGTTTAATTTTAATTTGC+AGG | + | chr1_1:79785889-79785908 | Msa0047110:intron | 15.0% |
!! | CAAATTATTAACAAATAAAG+GGG | - | chr1_1:79786394-79786413 | None:intergenic | 15.0% |
!! | GACAAATTATTAACAAATAA+AGG | - | chr1_1:79786396-79786415 | None:intergenic | 15.0% |
!!! | ATTTGTTAATAATTTGTCAA+TGG | + | chr1_1:79786398-79786417 | Msa0047110:three_prime_UTR | 15.0% |
!!! | ATATTCTCCTAAGAAAATTT+TGG | + | chr1_1:79785570-79785589 | Msa0047110:intron | 20.0% |
!!! | AATTAAGCCAAAATTTTCTT+AGG | - | chr1_1:79785580-79785599 | None:intergenic | 20.0% |
!! | TGAAATACTAAAACTGAATT+TGG | + | chr1_1:79786063-79786082 | Msa0047110:intron | 20.0% |
!! | ATATTGAATTCTATTAGAGA+AGG | + | chr1_1:79786254-79786273 | Msa0047110:three_prime_UTR | 20.0% |
!!! | ATTTTGATTCAAATGAAAGT+TGG | + | chr1_1:79786328-79786347 | Msa0047110:three_prime_UTR | 20.0% |
!!! | TTTTGATTCAAATGAAAGTT+GGG | + | chr1_1:79786329-79786348 | Msa0047110:three_prime_UTR | 20.0% |
!!! | TGGAAAAATCTTTTGATTAT+AGG | + | chr1_1:79786418-79786437 | Msa0047110:three_prime_UTR | 20.0% |
!!! | AAAATCTTTTGATTATAGGT+AGG | + | chr1_1:79786422-79786441 | Msa0047110:three_prime_UTR | 20.0% |
!!! | ATATTCTCCTAAGAAAATTT+TGG | + | chr1_1:79785570-79785589 | Msa0047110:intron | 20.0% |
!!! | AATTAAGCCAAAATTTTCTT+AGG | - | chr1_1:79785580-79785599 | None:intergenic | 20.0% |
!! | TGAAATACTAAAACTGAATT+TGG | + | chr1_1:79786063-79786082 | Msa0047110:intron | 20.0% |
!! | ATATTGAATTCTATTAGAGA+AGG | + | chr1_1:79786254-79786273 | Msa0047110:three_prime_UTR | 20.0% |
!!! | ATTTTGATTCAAATGAAAGT+TGG | + | chr1_1:79786328-79786347 | Msa0047110:three_prime_UTR | 20.0% |
!!! | TTTTGATTCAAATGAAAGTT+GGG | + | chr1_1:79786329-79786348 | Msa0047110:three_prime_UTR | 20.0% |
!!! | TGGAAAAATCTTTTGATTAT+AGG | + | chr1_1:79786418-79786437 | Msa0047110:three_prime_UTR | 20.0% |
!!! | AAAATCTTTTGATTATAGGT+AGG | + | chr1_1:79786422-79786441 | Msa0047110:three_prime_UTR | 20.0% |
!!! | TTGAAGATTTTTTTGGAGAT+TGG | - | chr1_1:79785381-79785400 | None:intergenic | 25.0% |
! | TCTTAGGAGAATATAATGTT+TGG | - | chr1_1:79785564-79785583 | None:intergenic | 25.0% |
!!! | ACATAGTAGAGTATTGTTAT+GGG | - | chr1_1:79786131-79786150 | None:intergenic | 25.0% |
! | TATTAACAAATAAAGGGGAA+TGG | - | chr1_1:79786389-79786408 | None:intergenic | 25.0% |
!!! | TTGAAGATTTTTTTGGAGAT+TGG | - | chr1_1:79785381-79785400 | None:intergenic | 25.0% |
! | TCTTAGGAGAATATAATGTT+TGG | - | chr1_1:79785564-79785583 | None:intergenic | 25.0% |
!!! | ACATAGTAGAGTATTGTTAT+GGG | - | chr1_1:79786131-79786150 | None:intergenic | 25.0% |
! | TATTAACAAATAAAGGGGAA+TGG | - | chr1_1:79786389-79786408 | None:intergenic | 25.0% |
! | ATCTTCTTCTGGCTAATATA+TGG | - | chr1_1:79785185-79785204 | None:intergenic | 30.0% |
ATATATTAGCCAGAAGAAGA+TGG | + | chr1_1:79785184-79785203 | Msa0047110:CDS | 30.0% | |
ATAAGACTTGAGTAGGTATT+AGG | - | chr1_1:79785314-79785333 | None:intergenic | 30.0% | |
! | AATACCTACTCAAGTCTTAT+AGG | + | chr1_1:79785314-79785333 | Msa0047110:CDS | 30.0% |
TTTGGTCTCTTGTATCATTT+AGG | + | chr1_1:79785342-79785361 | Msa0047110:CDS | 30.0% | |
GAAATGCCATCTATTGTAAA+AGG | + | chr1_1:79785472-79785491 | Msa0047110:CDS | 30.0% | |
! | ATGGAACCTTTTACAATAGA+TGG | - | chr1_1:79785481-79785500 | None:intergenic | 30.0% |
ATAAGTACTTACACTGAACA+TGG | - | chr1_1:79785536-79785555 | None:intergenic | 30.0% | |
TATTCTTTGGCAAACACAAA+GGG | - | chr1_1:79785938-79785957 | None:intergenic | 30.0% | |
AGAAAATGCAAGTGATTATG+CGG | + | chr1_1:79786034-79786053 | Msa0047110:intron | 30.0% | |
!! | CACATAGTAGAGTATTGTTA+TGG | - | chr1_1:79786132-79786151 | None:intergenic | 30.0% |
GCAAATCAATTATGATGTTG+TGG | + | chr1_1:79786179-79786198 | Msa0047110:three_prime_UTR | 30.0% | |
! | ATCTTCTTCTGGCTAATATA+TGG | - | chr1_1:79785185-79785204 | None:intergenic | 30.0% |
ATATATTAGCCAGAAGAAGA+TGG | + | chr1_1:79785184-79785203 | Msa0047110:CDS | 30.0% | |
ATAAGACTTGAGTAGGTATT+AGG | - | chr1_1:79785314-79785333 | None:intergenic | 30.0% | |
! | AATACCTACTCAAGTCTTAT+AGG | + | chr1_1:79785314-79785333 | Msa0047110:CDS | 30.0% |
TTTGGTCTCTTGTATCATTT+AGG | + | chr1_1:79785342-79785361 | Msa0047110:CDS | 30.0% | |
GAAATGCCATCTATTGTAAA+AGG | + | chr1_1:79785472-79785491 | Msa0047110:CDS | 30.0% | |
! | ATGGAACCTTTTACAATAGA+TGG | - | chr1_1:79785481-79785500 | None:intergenic | 30.0% |
ATAAGTACTTACACTGAACA+TGG | - | chr1_1:79785536-79785555 | None:intergenic | 30.0% | |
TATTCTTTGGCAAACACAAA+GGG | - | chr1_1:79785938-79785957 | None:intergenic | 30.0% | |
AGAAAATGCAAGTGATTATG+CGG | + | chr1_1:79786034-79786053 | Msa0047110:intron | 30.0% | |
!! | CACATAGTAGAGTATTGTTA+TGG | - | chr1_1:79786132-79786151 | None:intergenic | 30.0% |
GCAAATCAATTATGATGTTG+TGG | + | chr1_1:79786179-79786198 | Msa0047110:three_prime_UTR | 30.0% | |
GATTAATGCTTTCCTGTACA+TGG | + | chr1_1:79785004-79785023 | Msa0047110:five_prime_UTR | 35.0% | |
! | TCATCTTGGTAGTACAAGAA+AGG | + | chr1_1:79785027-79785046 | Msa0047110:five_prime_UTR | 35.0% |
AGAACATGAGTCTTAGAGAA+AGG | + | chr1_1:79785129-79785148 | Msa0047110:exon | 35.0% | |
GAACATGAGTCTTAGAGAAA+GGG | + | chr1_1:79785130-79785149 | Msa0047110:exon | 35.0% | |
AGAAAGGGATGTTGAAATTG+AGG | + | chr1_1:79785145-79785164 | Msa0047110:CDS | 35.0% | |
GACAAGACTTATCCTTATCA+TGG | + | chr1_1:79785265-79785284 | Msa0047110:CDS | 35.0% | |
GACTTATCCTTATCATGGTT+TGG | + | chr1_1:79785270-79785289 | Msa0047110:CDS | 35.0% | |
! | GTTTTCTCCAAACCATGATA+AGG | - | chr1_1:79785280-79785299 | None:intergenic | 35.0% |
AAGTCCTATAAGACTTGAGT+AGG | - | chr1_1:79785321-79785340 | None:intergenic | 35.0% | |
! | CAAGTCTTATAGGACTTGTT+TGG | + | chr1_1:79785324-79785343 | Msa0047110:CDS | 35.0% |
CAGTTAAGGATTCATGATCA+AGG | - | chr1_1:79785420-79785439 | None:intergenic | 35.0% | |
ATGCACATCATTAGCAGTTA+AGG | - | chr1_1:79785434-79785453 | None:intergenic | 35.0% | |
! | TTTTTATGCAGGTCTGTTCA+TGG | + | chr1_1:79785636-79785655 | Msa0047110:intron | 35.0% |
GTTACATGTTGCAATTGTTC+AGG | + | chr1_1:79785783-79785802 | Msa0047110:CDS | 35.0% | |
GTATTCTTTGGCAAACACAA+AGG | - | chr1_1:79785939-79785958 | None:intergenic | 35.0% | |
TGGATGGAGATTGTATTCTT+TGG | - | chr1_1:79785951-79785970 | None:intergenic | 35.0% | |
ATCCAAATATACTCAGCACT+GGG | + | chr1_1:79785966-79785985 | Msa0047110:CDS | 35.0% | |
ATACTCTACTATGTGCTTCT+TGG | + | chr1_1:79786137-79786156 | Msa0047110:CDS | 35.0% | |
TCTTGGAGTATAGTCTATCT+TGG | + | chr1_1:79786154-79786173 | Msa0047110:exon | 35.0% | |
ATTATGATGTTGTGGCTTCA+AGG | + | chr1_1:79786187-79786206 | Msa0047110:three_prime_UTR | 35.0% | |
TTATGATGTTGTGGCTTCAA+GGG | + | chr1_1:79786188-79786207 | Msa0047110:three_prime_UTR | 35.0% | |
GGCTCATTCAAACAAATGAA+TGG | + | chr1_1:79786209-79786228 | Msa0047110:three_prime_UTR | 35.0% | |
GATTGATCATCTGGAAATGT+GGG | - | chr1_1:79786365-79786384 | None:intergenic | 35.0% | |
AGATTGATCATCTGGAAATG+TGG | - | chr1_1:79786366-79786385 | None:intergenic | 35.0% | |
GATTAATGCTTTCCTGTACA+TGG | + | chr1_1:79785004-79785023 | Msa0047110:five_prime_UTR | 35.0% | |
! | TCATCTTGGTAGTACAAGAA+AGG | + | chr1_1:79785027-79785046 | Msa0047110:five_prime_UTR | 35.0% |
AGAACATGAGTCTTAGAGAA+AGG | + | chr1_1:79785129-79785148 | Msa0047110:exon | 35.0% | |
GAACATGAGTCTTAGAGAAA+GGG | + | chr1_1:79785130-79785149 | Msa0047110:exon | 35.0% | |
AGAAAGGGATGTTGAAATTG+AGG | + | chr1_1:79785145-79785164 | Msa0047110:CDS | 35.0% | |
GACAAGACTTATCCTTATCA+TGG | + | chr1_1:79785265-79785284 | Msa0047110:CDS | 35.0% | |
GACTTATCCTTATCATGGTT+TGG | + | chr1_1:79785270-79785289 | Msa0047110:CDS | 35.0% | |
! | GTTTTCTCCAAACCATGATA+AGG | - | chr1_1:79785280-79785299 | None:intergenic | 35.0% |
AAGTCCTATAAGACTTGAGT+AGG | - | chr1_1:79785321-79785340 | None:intergenic | 35.0% | |
! | CAAGTCTTATAGGACTTGTT+TGG | + | chr1_1:79785324-79785343 | Msa0047110:CDS | 35.0% |
CAGTTAAGGATTCATGATCA+AGG | - | chr1_1:79785420-79785439 | None:intergenic | 35.0% | |
ATGCACATCATTAGCAGTTA+AGG | - | chr1_1:79785434-79785453 | None:intergenic | 35.0% | |
! | TTTTTATGCAGGTCTGTTCA+TGG | + | chr1_1:79785636-79785655 | Msa0047110:intron | 35.0% |
GTTACATGTTGCAATTGTTC+AGG | + | chr1_1:79785783-79785802 | Msa0047110:CDS | 35.0% | |
GTATTCTTTGGCAAACACAA+AGG | - | chr1_1:79785939-79785958 | None:intergenic | 35.0% | |
TGGATGGAGATTGTATTCTT+TGG | - | chr1_1:79785951-79785970 | None:intergenic | 35.0% | |
ATCCAAATATACTCAGCACT+GGG | + | chr1_1:79785966-79785985 | Msa0047110:CDS | 35.0% | |
ATACTCTACTATGTGCTTCT+TGG | + | chr1_1:79786137-79786156 | Msa0047110:CDS | 35.0% | |
TCTTGGAGTATAGTCTATCT+TGG | + | chr1_1:79786154-79786173 | Msa0047110:exon | 35.0% | |
ATTATGATGTTGTGGCTTCA+AGG | + | chr1_1:79786187-79786206 | Msa0047110:three_prime_UTR | 35.0% | |
TTATGATGTTGTGGCTTCAA+GGG | + | chr1_1:79786188-79786207 | Msa0047110:three_prime_UTR | 35.0% | |
GGCTCATTCAAACAAATGAA+TGG | + | chr1_1:79786209-79786228 | Msa0047110:three_prime_UTR | 35.0% | |
GATTGATCATCTGGAAATGT+GGG | - | chr1_1:79786365-79786384 | None:intergenic | 35.0% | |
AGATTGATCATCTGGAAATG+TGG | - | chr1_1:79786366-79786385 | None:intergenic | 35.0% | |
TTTCCTGTACATGGTCATCT+TGG | + | chr1_1:79785013-79785032 | Msa0047110:five_prime_UTR | 40.0% | |
! | AGCATCAGACAGTATTGAGA+TGG | - | chr1_1:79785500-79785519 | None:intergenic | 40.0% |
ATCTCAATACTGTCTGATGC+TGG | + | chr1_1:79785499-79785518 | Msa0047110:CDS | 40.0% | |
TTTCCACATGCAATCAGCTT+AGG | - | chr1_1:79785670-79785689 | None:intergenic | 40.0% | |
! | ACGAGTTGCAACGTTTTCTA+TGG | + | chr1_1:79785690-79785709 | Msa0047110:CDS | 40.0% |
! | CAACGTTTTCTATGGCTGTT+AGG | + | chr1_1:79785698-79785717 | Msa0047110:CDS | 40.0% |
! | ACGGATACCAATTGCTATTG+AGG | - | chr1_1:79785755-79785774 | None:intergenic | 40.0% |
TCAATAGCAATTGGTATCCG+TGG | + | chr1_1:79785754-79785773 | Msa0047110:CDS | 40.0% | |
CAACATGTAACAGAACTCCA+CGG | - | chr1_1:79785774-79785793 | None:intergenic | 40.0% | |
! | CAGTGCTGAGTATATTTGGA+TGG | - | chr1_1:79785967-79785986 | None:intergenic | 40.0% |
CATCCAAATATACTCAGCAC+TGG | + | chr1_1:79785965-79785984 | Msa0047110:CDS | 40.0% | |
TTTCCTGTACATGGTCATCT+TGG | + | chr1_1:79785013-79785032 | Msa0047110:five_prime_UTR | 40.0% | |
! | AGCATCAGACAGTATTGAGA+TGG | - | chr1_1:79785500-79785519 | None:intergenic | 40.0% |
ATCTCAATACTGTCTGATGC+TGG | + | chr1_1:79785499-79785518 | Msa0047110:CDS | 40.0% | |
TTTCCACATGCAATCAGCTT+AGG | - | chr1_1:79785670-79785689 | None:intergenic | 40.0% | |
! | ACGAGTTGCAACGTTTTCTA+TGG | + | chr1_1:79785690-79785709 | Msa0047110:CDS | 40.0% |
! | CAACGTTTTCTATGGCTGTT+AGG | + | chr1_1:79785698-79785717 | Msa0047110:CDS | 40.0% |
! | ACGGATACCAATTGCTATTG+AGG | - | chr1_1:79785755-79785774 | None:intergenic | 40.0% |
TCAATAGCAATTGGTATCCG+TGG | + | chr1_1:79785754-79785773 | Msa0047110:CDS | 40.0% | |
CAACATGTAACAGAACTCCA+CGG | - | chr1_1:79785774-79785793 | None:intergenic | 40.0% | |
! | CAGTGCTGAGTATATTTGGA+TGG | - | chr1_1:79785967-79785986 | None:intergenic | 40.0% |
CATCCAAATATACTCAGCAC+TGG | + | chr1_1:79785965-79785984 | Msa0047110:CDS | 40.0% | |
CTACCAAGATGACCATGTAC+AGG | - | chr1_1:79785019-79785038 | None:intergenic | 45.0% | |
! | TAGCCAGAAGAAGATGGACT+TGG | + | chr1_1:79785190-79785209 | Msa0047110:CDS | 45.0% |
CTTCCAAGTCCATCTTCTTC+TGG | - | chr1_1:79785196-79785215 | None:intergenic | 45.0% | |
! | CAGAAGAAGATGGACTTGGA+AGG | + | chr1_1:79785194-79785213 | Msa0047110:CDS | 45.0% |
! | AAGAAGATGGACTTGGAAGG+AGG | + | chr1_1:79785197-79785216 | Msa0047110:CDS | 45.0% |
! | AGTCTTGTCATGACACTTGC+TGG | - | chr1_1:79785254-79785273 | None:intergenic | 45.0% |
CTAATGATGTGCATGCATGC+AGG | + | chr1_1:79785440-79785459 | Msa0047110:intron | 45.0% | |
! | ATACTGTCTGATGCTGGTCT+TGG | + | chr1_1:79785505-79785524 | Msa0047110:CDS | 45.0% |
CAACCTAAGCTGATTGCATG+TGG | + | chr1_1:79785664-79785683 | Msa0047110:CDS | 45.0% | |
ATGGCTGTTAGGTTCTTGAC+CGG | + | chr1_1:79785709-79785728 | Msa0047110:CDS | 45.0% | |
ACAAAGGGAACGATACCTTG+GGG | - | chr1_1:79785923-79785942 | None:intergenic | 45.0% | |
CACAAAGGGAACGATACCTT+GGG | - | chr1_1:79785924-79785943 | None:intergenic | 45.0% | |
ACACAAAGGGAACGATACCT+TGG | - | chr1_1:79785925-79785944 | None:intergenic | 45.0% | |
! | CACCCAGTGCTGAGTATATT+TGG | - | chr1_1:79785971-79785990 | None:intergenic | 45.0% |
AATTTGGCATGTGTGCTGCA+GGG | + | chr1_1:79786079-79786098 | Msa0047110:intron | 45.0% | |
GTGTGCTGCAGGGTTATATT+TGG | + | chr1_1:79786089-79786108 | Msa0047110:intron | 45.0% | |
GGGAATGGAGATTGATCATC+TGG | - | chr1_1:79786374-79786393 | None:intergenic | 45.0% | |
CTACCAAGATGACCATGTAC+AGG | - | chr1_1:79785019-79785038 | None:intergenic | 45.0% | |
! | TAGCCAGAAGAAGATGGACT+TGG | + | chr1_1:79785190-79785209 | Msa0047110:CDS | 45.0% |
CTTCCAAGTCCATCTTCTTC+TGG | - | chr1_1:79785196-79785215 | None:intergenic | 45.0% | |
! | CAGAAGAAGATGGACTTGGA+AGG | + | chr1_1:79785194-79785213 | Msa0047110:CDS | 45.0% |
! | AAGAAGATGGACTTGGAAGG+AGG | + | chr1_1:79785197-79785216 | Msa0047110:CDS | 45.0% |
! | AGTCTTGTCATGACACTTGC+TGG | - | chr1_1:79785254-79785273 | None:intergenic | 45.0% |
CTAATGATGTGCATGCATGC+AGG | + | chr1_1:79785440-79785459 | Msa0047110:intron | 45.0% | |
! | ATACTGTCTGATGCTGGTCT+TGG | + | chr1_1:79785505-79785524 | Msa0047110:CDS | 45.0% |
CAACCTAAGCTGATTGCATG+TGG | + | chr1_1:79785664-79785683 | Msa0047110:CDS | 45.0% | |
ATGGCTGTTAGGTTCTTGAC+CGG | + | chr1_1:79785709-79785728 | Msa0047110:CDS | 45.0% | |
ACAAAGGGAACGATACCTTG+GGG | - | chr1_1:79785923-79785942 | None:intergenic | 45.0% | |
CACAAAGGGAACGATACCTT+GGG | - | chr1_1:79785924-79785943 | None:intergenic | 45.0% | |
ACACAAAGGGAACGATACCT+TGG | - | chr1_1:79785925-79785944 | None:intergenic | 45.0% | |
! | CACCCAGTGCTGAGTATATT+TGG | - | chr1_1:79785971-79785990 | None:intergenic | 45.0% |
AATTTGGCATGTGTGCTGCA+GGG | + | chr1_1:79786079-79786098 | Msa0047110:intron | 45.0% | |
GTGTGCTGCAGGGTTATATT+TGG | + | chr1_1:79786089-79786108 | Msa0047110:intron | 45.0% | |
GGGAATGGAGATTGATCATC+TGG | - | chr1_1:79786374-79786393 | None:intergenic | 45.0% | |
! | AAGATGGACTTGGAAGGAGG+AGG | + | chr1_1:79785200-79785219 | Msa0047110:CDS | 50.0% |
! | AGATGGACTTGGAAGGAGGA+GGG | + | chr1_1:79785201-79785220 | Msa0047110:CDS | 50.0% |
! | CTTGTCATGACACTTGCTGG+TGG | - | chr1_1:79785251-79785270 | None:intergenic | 50.0% |
!! | GTCTGATGCTGGTCTTGGAA+TGG | + | chr1_1:79785510-79785529 | Msa0047110:CDS | 50.0% |
GCGGCAACCTCAATAGCAAT+TGG | + | chr1_1:79785745-79785764 | Msa0047110:CDS | 50.0% | |
GAATTTGGCATGTGTGCTGC+AGG | + | chr1_1:79786078-79786097 | Msa0047110:intron | 50.0% | |
! | AAGATGGACTTGGAAGGAGG+AGG | + | chr1_1:79785200-79785219 | Msa0047110:CDS | 50.0% |
! | AGATGGACTTGGAAGGAGGA+GGG | + | chr1_1:79785201-79785220 | Msa0047110:CDS | 50.0% |
! | CTTGTCATGACACTTGCTGG+TGG | - | chr1_1:79785251-79785270 | None:intergenic | 50.0% |
!! | GTCTGATGCTGGTCTTGGAA+TGG | + | chr1_1:79785510-79785529 | Msa0047110:CDS | 50.0% |
GCGGCAACCTCAATAGCAAT+TGG | + | chr1_1:79785745-79785764 | Msa0047110:CDS | 50.0% | |
GAATTTGGCATGTGTGCTGC+AGG | + | chr1_1:79786078-79786097 | Msa0047110:intron | 50.0% | |
! | GATGGACTTGGAAGGAGGAG+GGG | + | chr1_1:79785202-79785221 | Msa0047110:CDS | 55.0% |
GACCGGTCCAACTGTGATTG+CGG | + | chr1_1:79785726-79785745 | Msa0047110:CDS | 55.0% | |
TGCCGCAATCACAGTTGGAC+CGG | - | chr1_1:79785731-79785750 | None:intergenic | 55.0% | |
GAGGTTGCCGCAATCACAGT+TGG | - | chr1_1:79785736-79785755 | None:intergenic | 55.0% | |
! | GATGGACTTGGAAGGAGGAG+GGG | + | chr1_1:79785202-79785221 | Msa0047110:CDS | 55.0% |
GACCGGTCCAACTGTGATTG+CGG | + | chr1_1:79785726-79785745 | Msa0047110:CDS | 55.0% | |
TGCCGCAATCACAGTTGGAC+CGG | - | chr1_1:79785731-79785750 | None:intergenic | 55.0% | |
GAGGTTGCCGCAATCACAGT+TGG | - | chr1_1:79785736-79785755 | None:intergenic | 55.0% | |
TTGCAGGCTGCACTTCCCCA+AGG | + | chr1_1:79785905-79785924 | Msa0047110:intron | 60.0% | |
TTGCAGGCTGCACTTCCCCA+AGG | + | chr1_1:79785905-79785924 | Msa0047110:intron | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1_1 | gene | 79784984 | 79786461 | 79784984 | ID=Msa0047110;Name=Msa0047110 |
chr1_1 | mRNA | 79784984 | 79786461 | 79784984 | ID=Msa0047110-mRNA-1;Parent=Msa0047110;Name=Msa0047110-mRNA-1;_AED=0.05;_eAED=0.05;_QI=150|1|1|1|1|1|5|295|205 |
chr1_1 | exon | 79784984 | 79785363 | 79784984 | ID=Msa0047110-mRNA-1:exon:27522;Parent=Msa0047110-mRNA-1 |
chr1_1 | exon | 79785462 | 79785547 | 79785462 | ID=Msa0047110-mRNA-1:exon:27523;Parent=Msa0047110-mRNA-1 |
chr1_1 | exon | 79785647 | 79785804 | 79785647 | ID=Msa0047110-mRNA-1:exon:27524;Parent=Msa0047110-mRNA-1 |
chr1_1 | exon | 79785911 | 79785987 | 79785911 | ID=Msa0047110-mRNA-1:exon:27525;Parent=Msa0047110-mRNA-1 |
chr1_1 | exon | 79786100 | 79786461 | 79786100 | ID=Msa0047110-mRNA-1:exon:27526;Parent=Msa0047110-mRNA-1 |
chr1_1 | five_prime_UTR | 79784984 | 79785133 | 79784984 | ID=Msa0047110-mRNA-1:five_prime_utr;Parent=Msa0047110-mRNA-1 |
chr1_1 | CDS | 79785134 | 79785363 | 79785134 | ID=Msa0047110-mRNA-1:cds;Parent=Msa0047110-mRNA-1 |
chr1_1 | CDS | 79785462 | 79785547 | 79785462 | ID=Msa0047110-mRNA-1:cds;Parent=Msa0047110-mRNA-1 |
chr1_1 | CDS | 79785647 | 79785804 | 79785647 | ID=Msa0047110-mRNA-1:cds;Parent=Msa0047110-mRNA-1 |
chr1_1 | CDS | 79785911 | 79785987 | 79785911 | ID=Msa0047110-mRNA-1:cds;Parent=Msa0047110-mRNA-1 |
chr1_1 | CDS | 79786100 | 79786166 | 79786100 | ID=Msa0047110-mRNA-1:cds;Parent=Msa0047110-mRNA-1 |
chr1_1 | three_prime_UTR | 79786167 | 79786461 | 79786167 | ID=Msa0047110-mRNA-1:three_prime_utr;Parent=Msa0047110-mRNA-1 |
Gene Sequence |
Protein sequence |