Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0929290 | XP_003608194.2 | 98.162 | 544 | 10 | 0 | 1 | 544 | 1 | 544 | 0.0 | 1107 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0929290 | sp|Q8GWA1|NDA1_ARATH | 69.979 | 483 | 143 | 1 | 61 | 543 | 30 | 510 | 0.0 | 691 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0613150 | Msa0929290 | 0.898812 | 3.676358e-77 | -8.615850e-47 |
| Msa0696100 | Msa0929290 | 0.916612 | 1.444475e-85 | -8.615850e-47 |
| Msa0787790 | Msa0929290 | 0.815780 | 7.757276e-52 | -8.615850e-47 |
| Msa0264680 | Msa0929290 | 0.813235 | 2.836758e-51 | -8.615850e-47 |
| Msa0302730 | Msa0929290 | 0.820922 | 5.308617e-53 | -8.615850e-47 |
| Msa0558390 | Msa0929290 | 0.912283 | 2.325314e-83 | -8.615850e-47 |
| Msa0929290 | Msa1225580 | 0.813237 | 2.833135e-51 | -8.615850e-47 |
| Msa0929290 | Msa1355510 | 0.815015 | 1.147798e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0929290 | MtrunA17_Chr4g0048041 | 98.162 | 544 | 10 | 0 | 1 | 544 | 1 | 544 | 0.0 | 1107 |
| Msa0929290 | MtrunA17_Chr5g0430321 | 75.885 | 452 | 109 | 0 | 92 | 543 | 50 | 501 | 0.0 | 723 |
| Msa0929290 | MtrunA17_Chr3g0105191 | 68.750 | 496 | 149 | 3 | 54 | 543 | 9 | 504 | 0.0 | 687 |
| Msa0929290 | MtrunA17_Chr4g0048381 | 38.611 | 360 | 200 | 9 | 105 | 449 | 51 | 404 | 4.72e-72 | 240 |
| Msa0929290 | MtrunA17_Chr4g0048381 | 34.167 | 120 | 70 | 3 | 428 | 543 | 464 | 578 | 2.66e-12 | 69.3 |
| Msa0929290 | MtrunA17_Chr2g0281111 | 39.595 | 346 | 193 | 8 | 105 | 440 | 51 | 390 | 1.04e-71 | 239 |
| Msa0929290 | MtrunA17_Chr2g0281111 | 36.667 | 120 | 67 | 3 | 428 | 543 | 464 | 578 | 2.29e-14 | 75.9 |
| Msa0929290 | MtrunA17_Chr4g0022591 | 36.579 | 380 | 220 | 9 | 81 | 449 | 37 | 406 | 3.65e-67 | 227 |
| Msa0929290 | MtrunA17_Chr4g0022591 | 36.667 | 120 | 67 | 3 | 428 | 543 | 463 | 577 | 2.22e-15 | 79.0 |
| Msa0929290 | MtrunA17_Chr4g0022601 | 35.150 | 367 | 200 | 10 | 105 | 455 | 44 | 388 | 1.88e-64 | 220 |
| Msa0929290 | MtrunA17_Chr4g0022601 | 35.000 | 120 | 69 | 3 | 428 | 543 | 455 | 569 | 7.44e-13 | 71.2 |
| Msa0929290 | MtrunA17_Chr8g0384841 | 24.086 | 465 | 280 | 16 | 105 | 532 | 84 | 512 | 1.52e-13 | 73.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0929290 | AT1G07180.1 | 69.979 | 483 | 143 | 1 | 61 | 543 | 30 | 510 | 0.0 | 691 |
| Msa0929290 | AT2G29990.1 | 72.848 | 453 | 123 | 0 | 91 | 543 | 56 | 508 | 0.0 | 688 |
| Msa0929290 | AT4G21490.1 | 35.765 | 425 | 226 | 11 | 46 | 455 | 3 | 395 | 3.94e-66 | 225 |
| Msa0929290 | AT4G21490.1 | 32.231 | 121 | 73 | 3 | 427 | 543 | 465 | 580 | 1.29e-11 | 67.8 |
| Msa0929290 | AT4G21490.2 | 35.765 | 425 | 225 | 11 | 46 | 455 | 3 | 394 | 6.97e-66 | 224 |
| Msa0929290 | AT4G21490.2 | 32.231 | 121 | 73 | 3 | 427 | 543 | 464 | 579 | 1.28e-11 | 67.8 |
| Msa0929290 | AT4G28220.2 | 38.576 | 337 | 188 | 9 | 109 | 434 | 52 | 380 | 1.28e-65 | 222 |
| Msa0929290 | AT4G28220.1 | 38.576 | 337 | 188 | 9 | 109 | 434 | 52 | 380 | 3.20e-65 | 222 |
| Msa0929290 | AT4G28220.1 | 36.667 | 120 | 67 | 3 | 428 | 543 | 457 | 571 | 2.87e-13 | 72.8 |
| Msa0929290 | AT4G05020.1 | 41.745 | 321 | 175 | 7 | 105 | 417 | 57 | 373 | 1.45e-63 | 218 |
| Msa0929290 | AT4G05020.1 | 32.500 | 120 | 72 | 3 | 428 | 543 | 468 | 582 | 3.10e-11 | 66.6 |
| Msa0929290 | AT4G05020.2 | 41.745 | 321 | 175 | 7 | 105 | 417 | 57 | 373 | 3.12e-63 | 218 |
| Msa0929290 | AT2G20800.1 | 36.193 | 373 | 200 | 8 | 103 | 461 | 60 | 408 | 8.93e-57 | 200 |
| Msa0929290 | AT2G20800.1 | 37.500 | 120 | 66 | 3 | 428 | 543 | 468 | 582 | 1.50e-14 | 77.0 |
| Msa0929290 | AT5G08740.1 | 24.861 | 539 | 302 | 22 | 33 | 530 | 20 | 496 | 1.58e-19 | 92.4 |
Find 135 sgRNAs with CRISPR-Local
Find 197 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTAGAGTTGTTCAACAAAAT+TGG | 0.171502 | 6_2:+77060494 | Msa0929290:CDS |
| GTTGTTCTGTTCCTTAATTC+TGG | 0.179951 | 6_2:-77058482 | None:intergenic |
| TCTATAACTCTTTGTGTGTT+AGG | 0.192700 | 6_2:-77058553 | None:intergenic |
| GCTGCTTGTCGGTTTCTTAA+AGG | 0.225722 | 6_2:+77058679 | Msa0929290:CDS |
| CAGCAGGATAGGTTGAATTT+TGG | 0.230901 | 6_2:+77060925 | Msa0929290:exon |
| CATCACTCAAAACTATCTTT+TGG | 0.254195 | 6_2:-77059850 | None:intergenic |
| CCCTTGATACCGAAAGTTAA+AGG | 0.261179 | 6_2:-77059156 | None:intergenic |
| TAGATCAACAAGTGCCTTAT+AGG | 0.262816 | 6_2:-77060612 | None:intergenic |
| AGAAGATCAGGTGTTGCTTT+TGG | 0.283784 | 6_2:+77058364 | Msa0929290:CDS |
| TTTCAGAAAGCATCAGATTA+AGG | 0.287447 | 6_2:-77059245 | None:intergenic |
| GTGTTGGTACCCTTGAATTC+AGG | 0.309821 | 6_2:+77058782 | Msa0929290:CDS |
| TTCCTTATGGTCTCTTGGTT+TGG | 0.321151 | 6_2:+77059882 | Msa0929290:CDS |
| GGTCTCTTGGTTTGGTCCAC+AGG | 0.327590 | 6_2:+77059890 | Msa0929290:CDS |
| TTCGTATATTTCCAGAATTA+AGG | 0.335626 | 6_2:+77058471 | Msa0929290:CDS |
| CTGCTTGTCGGTTTCTTAAA+GGG | 0.336052 | 6_2:+77058680 | Msa0929290:CDS |
| TGTATCATGCTCAAGAAATA+AGG | 0.343406 | 6_2:+77059211 | Msa0929290:CDS |
| GCAAAGGGATTGTCACTTGC+TGG | 0.349729 | 6_2:+77060788 | Msa0929290:CDS |
| TAGAGTTGTTCAACAAAATT+GGG | 0.356038 | 6_2:+77060495 | Msa0929290:CDS |
| ACAATTTGTGTATAAACATA+TGG | 0.358161 | 6_2:+77060568 | Msa0929290:CDS |
| CTGCTGCATTGTGTAGTTAT+TGG | 0.365839 | 6_2:+77059422 | Msa0929290:CDS |
| CTATAACTCTTTGTGTGTTA+GGG | 0.367616 | 6_2:-77058552 | None:intergenic |
| TGTCATATGCAACTTTGAAT+TGG | 0.368204 | 6_2:-77059107 | None:intergenic |
| GGCATCAGTAGGTGCCTATA+AGG | 0.371076 | 6_2:+77060598 | Msa0929290:CDS |
| GGAGCTGAGCCTTTAACTTT+CGG | 0.375344 | 6_2:+77059147 | Msa0929290:CDS |
| ATTCTGGAAATATACGAAAA+TGG | 0.382739 | 6_2:-77058466 | None:intergenic |
| TTCTTTCTAGCTTCCTGCAC+TGG | 0.393614 | 6_2:+77058865 | Msa0929290:CDS |
| TGAAGTTCCTTATGGTCTCT+TGG | 0.393992 | 6_2:+77059877 | Msa0929290:CDS |
| GCCTTTAACTTTCGGTATCA+AGG | 0.394031 | 6_2:+77059155 | Msa0929290:CDS |
| ATCTTACACGTGTGCTGAGC+TGG | 0.396198 | 6_2:+77060843 | Msa0929290:CDS |
| GTCTGGAGTTTGTCTTATGC+GGG | 0.399394 | 6_2:+77059805 | Msa0929290:intron |
| ATGGGAAGGTAAGGAGCCTT+TGG | 0.400415 | 6_2:-77058434 | None:intergenic |
| GTGTGCTGAGCTGGAGGAAT+AGG | 0.406321 | 6_2:+77060852 | Msa0929290:CDS |
| GTACCGGTTGGGCTGCTTGT+CGG | 0.407943 | 6_2:+77058668 | Msa0929290:CDS |
| TTTGCACTTGGGGATTGTGC+TGG | 0.420564 | 6_2:+77060112 | Msa0929290:CDS |
| TTGGTTTGGTCCACAGGAGT+TGG | 0.429676 | 6_2:+77059896 | Msa0929290:CDS |
| TCCTTACCTTCCCATGTAGA+TGG | 0.433038 | 6_2:+77058442 | Msa0929290:CDS |
| TGATACAGAATTGGTGTTGA+TGG | 0.434223 | 6_2:+77060058 | Msa0929290:intron |
| CTGAATCTTCCAAGCTCTCC+AGG | 0.437706 | 6_2:+77059941 | Msa0929290:CDS |
| GTGGAAGATGTCTTTGCACT+TGG | 0.442231 | 6_2:+77060100 | Msa0929290:CDS |
| GATGGAACTGAAGTTCCTTA+TGG | 0.446289 | 6_2:+77059869 | Msa0929290:CDS |
| AACAAAATTGGGAAACAGAA+TGG | 0.446795 | 6_2:+77060506 | Msa0929290:CDS |
| TACCTTCCACCTGGAGAGCT+TGG | 0.449786 | 6_2:-77059950 | None:intergenic |
| CAGCAACAGACCTGAATTCA+AGG | 0.450864 | 6_2:-77058792 | None:intergenic |
| AGTTCCTGTTATTCCCCTCT+TGG | 0.451235 | 6_2:-77058515 | None:intergenic |
| TCTAGTCCTGCATATCTTGT+CGG | 0.452195 | 6_2:-77058604 | None:intergenic |
| AGAGTGGTTGTTCTCGGTAC+CGG | 0.453887 | 6_2:+77058652 | Msa0929290:CDS |
| ACGAAAATGGTCCATCTACA+TGG | 0.454099 | 6_2:-77058453 | None:intergenic |
| GGTTGTTCTCGGTACCGGTT+GGG | 0.456139 | 6_2:+77058657 | Msa0929290:CDS |
| AGCTAGAAAGAAGTATGAGT+TGG | 0.457476 | 6_2:-77058854 | None:intergenic |
| TGGAAGATGTCTTTGCACTT+GGG | 0.463774 | 6_2:+77060101 | Msa0929290:CDS |
| GTTATTGGAGGTGGTCCTAC+AGG | 0.464952 | 6_2:+77059437 | Msa0929290:CDS |
| TGAGCTAAAGCTGGAAGCAC+TGG | 0.467552 | 6_2:-77060157 | None:intergenic |
| CATATCACCAAGGAATCATA+TGG | 0.470079 | 6_2:+77058732 | Msa0929290:CDS |
| AAACCGACAAGCAGCCCAAC+CGG | 0.471084 | 6_2:-77058671 | None:intergenic |
| AGAAGCAACCTGAGAAGATC+AGG | 0.472613 | 6_2:+77058352 | Msa0929290:CDS |
| GCATCCTGTATTCTACCAAC+AGG | 0.478437 | 6_2:-77058817 | None:intergenic |
| GTGAAAACCATATGATTCCT+TGG | 0.479965 | 6_2:-77058739 | None:intergenic |
| AGTGCTTCCAGCTTTAGCTC+AGG | 0.480412 | 6_2:+77060159 | Msa0929290:CDS |
| AAGCAACACCTGATCTTCTC+AGG | 0.480533 | 6_2:-77058360 | None:intergenic |
| TCTGCAGATGGCATCACACT+TGG | 0.481006 | 6_2:+77060542 | Msa0929290:CDS |
| GACAAGCTTGTAATTGCAGC+TGG | 0.484313 | 6_2:+77059126 | Msa0929290:CDS |
| TAACACACAAAGAGTTATAG+AGG | 0.487725 | 6_2:+77058555 | Msa0929290:CDS |
| AAGCCTAGAGTGGTTGTTCT+CGG | 0.488864 | 6_2:+77058646 | Msa0929290:CDS |
| GACCAAACCAAGAGACCATA+AGG | 0.496146 | 6_2:-77059884 | None:intergenic |
| TATGCAACTTTGAATTGGTA+AGG | 0.497896 | 6_2:-77059102 | None:intergenic |
| TGGTTGTTCTCGGTACCGGT+TGG | 0.498770 | 6_2:+77058656 | Msa0929290:CDS |
| CAATTTGTGTATAAACATAT+GGG | 0.504254 | 6_2:+77060569 | Msa0929290:CDS |
| GGAAGATGTCTTTGCACTTG+GGG | 0.505360 | 6_2:+77060102 | Msa0929290:CDS |
| GTTTGTGTCAACTCCAGTGC+AGG | 0.507620 | 6_2:-77058878 | None:intergenic |
| TCTTATGCGGGGTGTGGTGA+AGG | 0.508837 | 6_2:+77059817 | Msa0929290:CDS |
| CTGCATTGTGTAGTTATTGG+AGG | 0.508933 | 6_2:+77059425 | Msa0929290:CDS |
| AGGCTAACCTGAGCTAAAGC+TGG | 0.509934 | 6_2:-77060166 | None:intergenic |
| CCTTTAACTTTCGGTATCAA+GGG | 0.512526 | 6_2:+77059156 | Msa0929290:CDS |
| GCTAGAAAGAAGTATGAGTT+GGG | 0.516821 | 6_2:-77058853 | None:intergenic |
| TTTCGGTATCAAGGGAGTAA+AGG | 0.520623 | 6_2:+77059164 | Msa0929290:CDS |
| CCTACAGGAGTGGAATTTAG+TGG | 0.520988 | 6_2:+77059452 | Msa0929290:CDS |
| CTCTTTAGATAATCCACCAT+TGG | 0.522845 | 6_2:-77059079 | None:intergenic |
| TCCATCTACATGGGAAGGTA+AGG | 0.529367 | 6_2:-77058443 | None:intergenic |
| CATTCATGTCACACTCATTG+AGG | 0.529894 | 6_2:+77059535 | Msa0929290:CDS |
| ATACTTTCATCCTTTGACGT+TGG | 0.533948 | 6_2:+77059660 | Msa0929290:CDS |
| CATTGTGTAGTTATTGGAGG+TGG | 0.534574 | 6_2:+77059428 | Msa0929290:CDS |
| AGTCTGGAGTTTGTCTTATG+CGG | 0.535341 | 6_2:+77059804 | Msa0929290:intron |
| CTGTCGAAGGCCAACGTCAA+AGG | 0.536614 | 6_2:-77059670 | None:intergenic |
| TGGAAGTAATGTACATGAGA+AGG | 0.538179 | 6_2:+77058384 | Msa0929290:CDS |
| TTTGTGTGTTAGGGAGCTGA+TGG | 0.540218 | 6_2:-77058543 | None:intergenic |
| TCTTTGGCAGAGACAACAGC+AGG | 0.541549 | 6_2:+77060909 | Msa0929290:CDS |
| ATAAGGCACTTGTTGATCTA+CGG | 0.542831 | 6_2:+77060615 | Msa0929290:CDS |
| GGCAGAGACAACAGCAGGAT+AGG | 0.543946 | 6_2:+77060914 | Msa0929290:CDS |
| CCACTAAATTCCACTCCTGT+AGG | 0.546000 | 6_2:-77059452 | None:intergenic |
| GGACTAGAGGCAACAAAACC+AGG | 0.554285 | 6_2:+77058619 | Msa0929290:CDS |
| GTCTCTGCCAAAGACAAAAG+TGG | 0.556692 | 6_2:-77060900 | None:intergenic |
| GATGATCCGACAAGATATGC+AGG | 0.562686 | 6_2:+77058598 | Msa0929290:CDS |
| AGGTCTGTTGCTGAGCCTGT+TGG | 0.569427 | 6_2:+77058802 | Msa0929290:CDS |
| ACAGAATTGGTGTTGATGGA+TGG | 0.570983 | 6_2:+77060062 | Msa0929290:intron |
| GTACCGAGAACAACCACTCT+AGG | 0.573776 | 6_2:-77058649 | None:intergenic |
| GGAAAGGCTTTGTCTGCAGA+TGG | 0.574116 | 6_2:+77060530 | Msa0929290:CDS |
| TCTTATGTTATAGGATGCAA+AGG | 0.575813 | 6_2:+77060772 | Msa0929290:intron |
| AATGGTCCATCTACATGGGA+AGG | 0.577054 | 6_2:-77058448 | None:intergenic |
| TTGTTGGCTTCAACATGTGT+TGG | 0.577991 | 6_2:+77058766 | Msa0929290:CDS |
| CTGATGCTTTCTGAAAATCC+AGG | 0.580189 | 6_2:+77059252 | Msa0929290:CDS |
| TGCGAGGCAGTTACCAATGG+TGG | 0.582363 | 6_2:+77059066 | Msa0929290:CDS |
| GAGAGAACATTTACATCCAA+AGG | 0.583362 | 6_2:+77058418 | Msa0929290:CDS |
| TGAGCCTGTTGGTAGAATAC+AGG | 0.585959 | 6_2:+77058813 | Msa0929290:CDS |
| GGCTTCACATACCTTCCACC+TGG | 0.586382 | 6_2:-77059959 | None:intergenic |
| TTCCAAGCTCTCCAGGTGGA+AGG | 0.587295 | 6_2:+77059948 | Msa0929290:CDS |
| AGTTTGTCTTATGCGGGGTG+TGG | 0.589261 | 6_2:+77059811 | Msa0929290:CDS |
| TACTGCGAGGCAGTTACCAA+TGG | 0.597374 | 6_2:+77059063 | Msa0929290:CDS |
| CTTATGTTATAGGATGCAAA+GGG | 0.602916 | 6_2:+77060773 | Msa0929290:intron |
| TGTTGATCTACGGCAATCCA+AGG | 0.602932 | 6_2:+77060625 | Msa0929290:CDS |
| TGGGAAACAGAATGGAGGAA+AGG | 0.603382 | 6_2:+77060514 | Msa0929290:CDS |
| ATGGGGAGCATGGCATCAGT+AGG | 0.604143 | 6_2:+77060587 | Msa0929290:CDS |
| GTATAAACATATGGGGAGCA+TGG | 0.604718 | 6_2:+77060577 | Msa0929290:CDS |
| AATACAGGATGCACTAGCAA+AGG | 0.606941 | 6_2:+77058828 | Msa0929290:CDS |
| ATGGATGCGTGTTCCGTCTG+TGG | 0.610196 | 6_2:+77060081 | Msa0929290:CDS |
| CTATAACAATGGCATTAGCA+AGG | 0.610697 | 6_2:+77058323 | None:intergenic |
| CTCAGAGGGACCAACTCCTG+TGG | 0.615481 | 6_2:-77059906 | None:intergenic |
| CGAAAATGGTCCATCTACAT+GGG | 0.615536 | 6_2:-77058452 | None:intergenic |
| TATGCGGGGTGTGGTGAAGG+AGG | 0.616063 | 6_2:+77059820 | Msa0929290:CDS |
| GACAAGATATGCAGGACTAG+AGG | 0.619013 | 6_2:+77058606 | Msa0929290:CDS |
| TGGAGGTGGTCCTACAGGAG+TGG | 0.621881 | 6_2:+77059442 | Msa0929290:CDS |
| GCTTCGTTGCATACTGTCGA+AGG | 0.629576 | 6_2:-77059683 | None:intergenic |
| GCAAAGACATCTTCCACAGA+CGG | 0.636642 | 6_2:-77060094 | None:intergenic |
| TTACACGTGTGCTGAGCTGG+AGG | 0.642106 | 6_2:+77060846 | Msa0929290:CDS |
| TCTGGAGTTTGTCTTATGCG+GGG | 0.644473 | 6_2:+77059806 | Msa0929290:CDS |
| AGCAACAGACCTGAATTCAA+GGG | 0.646467 | 6_2:-77058791 | None:intergenic |
| ACCAGGTGAAAAGCCTAGAG+TGG | 0.649954 | 6_2:+77058636 | Msa0929290:CDS |
| TGACAGGTTGCTGAAAGACA+AGG | 0.650294 | 6_2:+77060461 | Msa0929290:intron |
| ACACATGTTGAAGCCAACAA+AGG | 0.657554 | 6_2:-77058763 | None:intergenic |
| AAAATTGGGAAACAGAATGG+AGG | 0.666719 | 6_2:+77060509 | Msa0929290:CDS |
| AATTTGTGTATAAACATATG+GGG | 0.676076 | 6_2:+77060570 | Msa0929290:CDS |
| TGCAACGAAGCACTTAACAA+AGG | 0.676652 | 6_2:+77059695 | Msa0929290:CDS |
| AATCTTCCAAGCTCTCCAGG+TGG | 0.690106 | 6_2:+77059944 | Msa0929290:CDS |
| CAGCACACGTGTAAGATATG+CGG | 0.691917 | 6_2:-77060837 | None:intergenic |
| ATGTCAACAGGTCTACTGCG+AGG | 0.733020 | 6_2:+77059050 | Msa0929290:intron |
| ATGTTGTGTGCATATCACCA+AGG | 0.767641 | 6_2:+77058722 | Msa0929290:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ACATTTTAAATTTTAATATC+TGG | - | chr6_2:77059983-77060002 | None:intergenic | 10.0% |
| !!! | ATTTGTTATAATAATTATGC+AGG | + | chr6_2:77059315-77059334 | Msa0929290:intron | 15.0% |
| !!! | GTATAGTTTTTCTAAAAGAA+GGG | - | chr6_2:77058930-77058949 | None:intergenic | 20.0% |
| !!! | AGTATAGTTTTTCTAAAAGA+AGG | - | chr6_2:77058931-77058950 | None:intergenic | 20.0% |
| !!! | AAAATGTTTTTCATTATGAC+AGG | + | chr6_2:77059374-77059393 | Msa0929290:intron | 20.0% |
| !! | AATTATGAAAAGTTAAACAG+TGG | - | chr6_2:77059629-77059648 | None:intergenic | 20.0% |
| !!! | CTGTTTAACTTTTCATAATT+AGG | + | chr6_2:77059629-77059648 | Msa0929290:intron | 20.0% |
| !! | AGACAATATAGATAAATGTT+AGG | - | chr6_2:77060245-77060264 | None:intergenic | 20.0% |
| !!! | TCTATTGGAATTTTTTACAT+TGG | - | chr6_2:77060274-77060293 | None:intergenic | 20.0% |
| !! | AATGTAAAAAATTCCAATAG+AGG | + | chr6_2:77060273-77060292 | Msa0929290:intron | 20.0% |
| !! | ATGTAAAAAATTCCAATAGA+GGG | + | chr6_2:77060274-77060293 | Msa0929290:intron | 20.0% |
| !! | ACAATTTGTGTATAAACATA+TGG | + | chr6_2:77060568-77060587 | Msa0929290:CDS | 20.0% |
| !! | CAATTTGTGTATAAACATAT+GGG | + | chr6_2:77060569-77060588 | Msa0929290:CDS | 20.0% |
| !! | AATTTGTGTATAAACATATG+GGG | + | chr6_2:77060570-77060589 | Msa0929290:CDS | 20.0% |
| !! | CAAAATGTATCTTATGTTAT+AGG | + | chr6_2:77060763-77060782 | Msa0929290:intron | 20.0% |
| !! | ATTCTGGAAATATACGAAAA+TGG | - | chr6_2:77058469-77058488 | None:intergenic | 25.0% |
| ! | TTCGTATATTTCCAGAATTA+AGG | + | chr6_2:77058471-77058490 | Msa0929290:CDS | 25.0% |
| ! | GAAAAACTATACTGTTACAA+TGG | + | chr6_2:77058938-77058957 | Msa0929290:intron | 25.0% |
| ! | GCTTAAAACTAAACTAAGTA+TGG | - | chr6_2:77059292-77059311 | None:intergenic | 25.0% |
| ! | TGTTATAATAATTATGCAGG+TGG | + | chr6_2:77059318-77059337 | Msa0929290:intron | 25.0% |
| ! | GTTATAATAATTATGCAGGT+GGG | + | chr6_2:77059319-77059338 | Msa0929290:intron | 25.0% |
| !!! | GTCATTATTTTTTTTGCCAA+AGG | + | chr6_2:77059343-77059362 | Msa0929290:intron | 25.0% |
| !! | ATTCAATTTTTGTATCAGTC+TGG | + | chr6_2:77059788-77059807 | Msa0929290:intron | 25.0% |
| !! | ATCACTCAAAACTATCTTTT+GGG | - | chr6_2:77059852-77059871 | None:intergenic | 25.0% |
| ! | ACAAAACATCATAGACAATA+AGG | - | chr6_2:77060189-77060208 | None:intergenic | 25.0% |
| ! | TAGAGTTGTTCAACAAAATT+GGG | + | chr6_2:77060495-77060514 | Msa0929290:CDS | 25.0% |
| ! | CAAAATATTGTGTCAAAAAG+TGG | - | chr6_2:77060978-77060997 | None:intergenic | 25.0% |
| !!! | CACTTTTTGACACAATATTT+TGG | + | chr6_2:77060976-77060995 | Msa0929290:three_prime_UTR | 25.0% |
| ! | ACAACATGAAATTTTCCAAG+AGG | + | chr6_2:77058500-77058519 | Msa0929290:CDS | 30.0% |
| ! | CAACATGAAATTTTCCAAGA+GGG | + | chr6_2:77058501-77058520 | Msa0929290:CDS | 30.0% |
| ! | AACATGAAATTTTCCAAGAG+GGG | + | chr6_2:77058502-77058521 | Msa0929290:CDS | 30.0% |
| CTATAACTCTTTGTGTGTTA+GGG | - | chr6_2:77058555-77058574 | None:intergenic | 30.0% | |
| TCTATAACTCTTTGTGTGTT+AGG | - | chr6_2:77058556-77058575 | None:intergenic | 30.0% | |
| TAACACACAAAGAGTTATAG+AGG | + | chr6_2:77058555-77058574 | Msa0929290:CDS | 30.0% | |
| ! | CAATTTTACTTCATGTCAAC+AGG | + | chr6_2:77059038-77059057 | Msa0929290:intron | 30.0% |
| TATGCAACTTTGAATTGGTA+AGG | - | chr6_2:77059105-77059124 | None:intergenic | 30.0% | |
| TGTCATATGCAACTTTGAAT+TGG | - | chr6_2:77059110-77059129 | None:intergenic | 30.0% | |
| TGTATCATGCTCAAGAAATA+AGG | + | chr6_2:77059211-77059230 | Msa0929290:CDS | 30.0% | |
| !! | TTTCAGAAAGCATCAGATTA+AGG | - | chr6_2:77059248-77059267 | None:intergenic | 30.0% |
| GACATGTAATCATTGAAGAT+TGG | - | chr6_2:77059751-77059770 | None:intergenic | 30.0% | |
| ! | TCACTCAAAACTATCTTTTG+GGG | - | chr6_2:77059851-77059870 | None:intergenic | 30.0% |
| ! | CATCACTCAAAACTATCTTT+TGG | - | chr6_2:77059853-77059872 | None:intergenic | 30.0% |
| !!! | CAAAAGATAGTTTTGAGTGA+TGG | + | chr6_2:77059851-77059870 | Msa0929290:CDS | 30.0% |
| !!! | AGTTTTTTGACAAACTCAGA+GGG | - | chr6_2:77059923-77059942 | None:intergenic | 30.0% |
| GTTGTTGAATGATACAGAAT+TGG | + | chr6_2:77060049-77060068 | Msa0929290:intron | 30.0% | |
| ! | TGATGTTTTGTCAGTACATA+TGG | + | chr6_2:77060198-77060217 | Msa0929290:intron | 30.0% |
| ATGCATAGTACTACAGAAAT+AGG | + | chr6_2:77060340-77060359 | Msa0929290:intron | 30.0% | |
| ! | TTTTGTTGAACAACTCTACA+AGG | - | chr6_2:77060493-77060512 | None:intergenic | 30.0% |
| GTAGAGTTGTTCAACAAAAT+TGG | + | chr6_2:77060494-77060513 | Msa0929290:CDS | 30.0% | |
| AACAAAATTGGGAAACAGAA+TGG | + | chr6_2:77060506-77060525 | Msa0929290:CDS | 30.0% | |
| CTCTAATGTCTAATTTACAC+TGG | + | chr6_2:77060680-77060699 | Msa0929290:intron | 30.0% | |
| TCTTATGTTATAGGATGCAA+AGG | + | chr6_2:77060772-77060791 | Msa0929290:intron | 30.0% | |
| CTTATGTTATAGGATGCAAA+GGG | + | chr6_2:77060773-77060792 | Msa0929290:intron | 30.0% | |
| !!! | CAAAAAGTGGATTGATTTTG+TGG | - | chr6_2:77060965-77060984 | None:intergenic | 30.0% |
| TGGAAGTAATGTACATGAGA+AGG | + | chr6_2:77058384-77058403 | Msa0929290:CDS | 35.0% | |
| GAGAGAACATTTACATCCAA+AGG | + | chr6_2:77058418-77058437 | Msa0929290:CDS | 35.0% | |
| GTTGTTCTGTTCCTTAATTC+TGG | - | chr6_2:77058485-77058504 | None:intergenic | 35.0% | |
| CATATCACCAAGGAATCATA+TGG | + | chr6_2:77058732-77058751 | Msa0929290:CDS | 35.0% | |
| GTGAAAACCATATGATTCCT+TGG | - | chr6_2:77058742-77058761 | None:intergenic | 35.0% | |
| ! | TATGGTTTTCACTCCTTTGT+TGG | + | chr6_2:77058750-77058769 | Msa0929290:CDS | 35.0% |
| ! | GCTAGAAAGAAGTATGAGTT+GGG | - | chr6_2:77058856-77058875 | None:intergenic | 35.0% |
| ! | AGCTAGAAAGAAGTATGAGT+TGG | - | chr6_2:77058857-77058876 | None:intergenic | 35.0% |
| CTCTTTAGATAATCCACCAT+TGG | - | chr6_2:77059082-77059101 | None:intergenic | 35.0% | |
| ! | CCTTTAACTTTCGGTATCAA+GGG | + | chr6_2:77059156-77059175 | Msa0929290:CDS | 35.0% |
| !! | AACATTTTCAGCTTAGCCTT+TGG | - | chr6_2:77059362-77059381 | None:intergenic | 35.0% |
| ATACTTTCATCCTTTGACGT+TGG | + | chr6_2:77059660-77059679 | Msa0929290:CDS | 35.0% | |
| ATACGCGATCTAAACACAAA+AGG | - | chr6_2:77059725-77059744 | None:intergenic | 35.0% | |
| !!! | CAGTTTTTTGACAAACTCAG+AGG | - | chr6_2:77059924-77059943 | None:intergenic | 35.0% |
| !! | TGATACAGAATTGGTGTTGA+TGG | + | chr6_2:77060058-77060077 | Msa0929290:intron | 35.0% |
| ! | GTTTTCTTGAACAAACTGGA+AGG | + | chr6_2:77060134-77060153 | Msa0929290:CDS | 35.0% |
| AAAATTGGGAAACAGAATGG+AGG | + | chr6_2:77060509-77060528 | Msa0929290:CDS | 35.0% | |
| TAGATCAACAAGTGCCTTAT+AGG | - | chr6_2:77060615-77060634 | None:intergenic | 35.0% | |
| ! | ATAAGGCACTTGTTGATCTA+CGG | + | chr6_2:77060615-77060634 | Msa0929290:CDS | 35.0% |
| GAAACTTTCCCATTATACCT+TGG | - | chr6_2:77060645-77060664 | None:intergenic | 35.0% | |
| ! | GTTTTACGTGGCAGTAAATT+GGG | + | chr6_2:77060874-77060893 | Msa0929290:CDS | 35.0% |
| ! | TTTTACGTGGCAGTAAATTG+GGG | + | chr6_2:77060875-77060894 | Msa0929290:CDS | 35.0% |
| !!! | GACACAATATTTTGGTTGAG+TGG | + | chr6_2:77060984-77061003 | Msa0929290:three_prime_UTR | 35.0% |
| !!! | AGAAGATCAGGTGTTGCTTT+TGG | + | chr6_2:77058364-77058383 | Msa0929290:CDS | 40.0% |
| CGAAAATGGTCCATCTACAT+GGG | - | chr6_2:77058455-77058474 | None:intergenic | 40.0% | |
| ACGAAAATGGTCCATCTACA+TGG | - | chr6_2:77058456-77058475 | None:intergenic | 40.0% | |
| ! | TTTTCCAAGAGGGGAATAAC+AGG | + | chr6_2:77058511-77058530 | Msa0929290:CDS | 40.0% |
| TCTAGTCCTGCATATCTTGT+CGG | - | chr6_2:77058607-77058626 | None:intergenic | 40.0% | |
| !! | CTGCTTGTCGGTTTCTTAAA+GGG | + | chr6_2:77058680-77058699 | Msa0929290:CDS | 40.0% |
| ATGTTGTGTGCATATCACCA+AGG | + | chr6_2:77058722-77058741 | Msa0929290:CDS | 40.0% | |
| ACACATGTTGAAGCCAACAA+AGG | - | chr6_2:77058766-77058785 | None:intergenic | 40.0% | |
| !! | TTGTTGGCTTCAACATGTGT+TGG | + | chr6_2:77058766-77058785 | Msa0929290:CDS | 40.0% |
| AGCAACAGACCTGAATTCAA+GGG | - | chr6_2:77058794-77058813 | None:intergenic | 40.0% | |
| AATACAGGATGCACTAGCAA+AGG | + | chr6_2:77058828-77058847 | Msa0929290:CDS | 40.0% | |
| ! | GCCTTTAACTTTCGGTATCA+AGG | + | chr6_2:77059155-77059174 | Msa0929290:CDS | 40.0% |
| CCCTTGATACCGAAAGTTAA+AGG | - | chr6_2:77059159-77059178 | None:intergenic | 40.0% | |
| TTTCGGTATCAAGGGAGTAA+AGG | + | chr6_2:77059164-77059183 | Msa0929290:CDS | 40.0% | |
| ! | CTGATGCTTTCTGAAAATCC+AGG | + | chr6_2:77059252-77059271 | Msa0929290:CDS | 40.0% |
| ! | ATGCTTTCTGAAAATCCAGG+TGG | + | chr6_2:77059255-77059274 | Msa0929290:intron | 40.0% |
| ! | TGCTTTCTGAAAATCCAGGT+GGG | + | chr6_2:77059256-77059275 | Msa0929290:intron | 40.0% |
| CTGCTGCATTGTGTAGTTAT+TGG | + | chr6_2:77059422-77059441 | Msa0929290:CDS | 40.0% | |
| CTGCATTGTGTAGTTATTGG+AGG | + | chr6_2:77059425-77059444 | Msa0929290:CDS | 40.0% | |
| CATTGTGTAGTTATTGGAGG+TGG | + | chr6_2:77059428-77059447 | Msa0929290:CDS | 40.0% | |
| CATTCATGTCACACTCATTG+AGG | + | chr6_2:77059535-77059554 | Msa0929290:CDS | 40.0% | |
| ! | TGCAACGAAGCACTTAACAA+AGG | + | chr6_2:77059695-77059714 | Msa0929290:CDS | 40.0% |
| ! | AGTCTGGAGTTTGTCTTATG+CGG | + | chr6_2:77059804-77059823 | Msa0929290:intron | 40.0% |
| GATGGAACTGAAGTTCCTTA+TGG | + | chr6_2:77059869-77059888 | Msa0929290:CDS | 40.0% | |
| TGAAGTTCCTTATGGTCTCT+TGG | + | chr6_2:77059877-77059896 | Msa0929290:CDS | 40.0% | |
| TTCCTTATGGTCTCTTGGTT+TGG | + | chr6_2:77059882-77059901 | Msa0929290:CDS | 40.0% | |
| !! | ACAGAATTGGTGTTGATGGA+TGG | + | chr6_2:77060062-77060081 | Msa0929290:intron | 40.0% |
| TGGAAGATGTCTTTGCACTT+GGG | + | chr6_2:77060101-77060120 | Msa0929290:CDS | 40.0% | |
| !!! | GCTGGTTTTCTTGAACAAAC+TGG | + | chr6_2:77060130-77060149 | Msa0929290:CDS | 40.0% |
| GAGTATACTTTCCTATGCAC+TGG | + | chr6_2:77060434-77060453 | Msa0929290:intron | 40.0% | |
| GTATAAACATATGGGGAGCA+TGG | + | chr6_2:77060577-77060596 | Msa0929290:CDS | 40.0% | |
| TACGGCAATCCAAGGTATAA+TGG | + | chr6_2:77060633-77060652 | Msa0929290:intron | 40.0% | |
| ACGGCAATCCAAGGTATAAT+GGG | + | chr6_2:77060634-77060653 | Msa0929290:intron | 40.0% | |
| ! | GGTTTTACGTGGCAGTAAAT+TGG | + | chr6_2:77060873-77060892 | Msa0929290:CDS | 40.0% |
| !! | CAGCAGGATAGGTTGAATTT+TGG | + | chr6_2:77060925-77060944 | Msa0929290:exon | 40.0% |
| AGAAGCAACCTGAGAAGATC+AGG | + | chr6_2:77058352-77058371 | Msa0929290:CDS | 45.0% | |
| AAGCAACACCTGATCTTCTC+AGG | - | chr6_2:77058363-77058382 | None:intergenic | 45.0% | |
| TCCTTACCTTCCCATGTAGA+TGG | + | chr6_2:77058442-77058461 | Msa0929290:CDS | 45.0% | |
| TCCATCTACATGGGAAGGTA+AGG | - | chr6_2:77058446-77058465 | None:intergenic | 45.0% | |
| AATGGTCCATCTACATGGGA+AGG | - | chr6_2:77058451-77058470 | None:intergenic | 45.0% | |
| AGTTCCTGTTATTCCCCTCT+TGG | - | chr6_2:77058518-77058537 | None:intergenic | 45.0% | |
| TTTGTGTGTTAGGGAGCTGA+TGG | - | chr6_2:77058546-77058565 | None:intergenic | 45.0% | |
| GATGATCCGACAAGATATGC+AGG | + | chr6_2:77058598-77058617 | Msa0929290:CDS | 45.0% | |
| GACAAGATATGCAGGACTAG+AGG | + | chr6_2:77058606-77058625 | Msa0929290:CDS | 45.0% | |
| AAGCCTAGAGTGGTTGTTCT+CGG | + | chr6_2:77058646-77058665 | Msa0929290:CDS | 45.0% | |
| !! | GCTGCTTGTCGGTTTCTTAA+AGG | + | chr6_2:77058679-77058698 | Msa0929290:CDS | 45.0% |
| ! | GTGTTGGTACCCTTGAATTC+AGG | + | chr6_2:77058782-77058801 | Msa0929290:CDS | 45.0% |
| CAGCAACAGACCTGAATTCA+AGG | - | chr6_2:77058795-77058814 | None:intergenic | 45.0% | |
| ! | TGAGCCTGTTGGTAGAATAC+AGG | + | chr6_2:77058813-77058832 | Msa0929290:CDS | 45.0% |
| GCATCCTGTATTCTACCAAC+AGG | - | chr6_2:77058820-77058839 | None:intergenic | 45.0% | |
| !! | TTCTTTCTAGCTTCCTGCAC+TGG | + | chr6_2:77058865-77058884 | Msa0929290:CDS | 45.0% |
| GACAAGCTTGTAATTGCAGC+TGG | + | chr6_2:77059126-77059145 | Msa0929290:CDS | 45.0% | |
| ! | GGAGCTGAGCCTTTAACTTT+CGG | + | chr6_2:77059147-77059166 | Msa0929290:CDS | 45.0% |
| ATGGATATGAAACACCCACC+TGG | - | chr6_2:77059273-77059292 | None:intergenic | 45.0% | |
| CCACTAAATTCCACTCCTGT+AGG | - | chr6_2:77059455-77059474 | None:intergenic | 45.0% | |
| CCTACAGGAGTGGAATTTAG+TGG | + | chr6_2:77059452-77059471 | Msa0929290:CDS | 45.0% | |
| ! | GTCTGGAGTTTGTCTTATGC+GGG | + | chr6_2:77059805-77059824 | Msa0929290:intron | 45.0% |
| ! | TCTGGAGTTTGTCTTATGCG+GGG | + | chr6_2:77059806-77059825 | Msa0929290:CDS | 45.0% |
| GACCAAACCAAGAGACCATA+AGG | - | chr6_2:77059887-77059906 | None:intergenic | 45.0% | |
| GCAAAGACATCTTCCACAGA+CGG | - | chr6_2:77060097-77060116 | None:intergenic | 45.0% | |
| GTGGAAGATGTCTTTGCACT+TGG | + | chr6_2:77060100-77060119 | Msa0929290:CDS | 45.0% | |
| GGAAGATGTCTTTGCACTTG+GGG | + | chr6_2:77060102-77060121 | Msa0929290:CDS | 45.0% | |
| !! | TCCAATAGAGGGTACTTGAC+AGG | + | chr6_2:77060285-77060304 | Msa0929290:intron | 45.0% |
| TGACAGGTTGCTGAAAGACA+AGG | + | chr6_2:77060461-77060480 | Msa0929290:intron | 45.0% | |
| TGGGAAACAGAATGGAGGAA+AGG | + | chr6_2:77060514-77060533 | Msa0929290:CDS | 45.0% | |
| TGTTGATCTACGGCAATCCA+AGG | + | chr6_2:77060625-77060644 | Msa0929290:CDS | 45.0% | |
| ! | GTTTTGTCAGCTGGCTGATA+TGG | + | chr6_2:77060810-77060829 | Msa0929290:CDS | 45.0% |
| CAGCACACGTGTAAGATATG+CGG | - | chr6_2:77060840-77060859 | None:intergenic | 45.0% | |
| ! | CTGGAGGAATAGGTTTTACG+TGG | + | chr6_2:77060862-77060881 | Msa0929290:CDS | 45.0% |
| !! | TGGGGAACCACTTTTGTCTT+TGG | + | chr6_2:77060893-77060912 | Msa0929290:CDS | 45.0% |
| GTCTCTGCCAAAGACAAAAG+TGG | - | chr6_2:77060903-77060922 | None:intergenic | 45.0% | |
| ATGGGAAGGTAAGGAGCCTT+TGG | - | chr6_2:77058437-77058456 | None:intergenic | 50.0% | |
| GGACTAGAGGCAACAAAACC+AGG | + | chr6_2:77058619-77058638 | Msa0929290:CDS | 50.0% | |
| ACCAGGTGAAAAGCCTAGAG+TGG | + | chr6_2:77058636-77058655 | Msa0929290:CDS | 50.0% | |
| ! | ACCACTCTAGGCTTTTCACC+TGG | - | chr6_2:77058640-77058659 | None:intergenic | 50.0% |
| GTACCGAGAACAACCACTCT+AGG | - | chr6_2:77058652-77058671 | None:intergenic | 50.0% | |
| AGAGTGGTTGTTCTCGGTAC+CGG | + | chr6_2:77058652-77058671 | Msa0929290:CDS | 50.0% | |
| GTTTGTGTCAACTCCAGTGC+AGG | - | chr6_2:77058881-77058900 | None:intergenic | 50.0% | |
| ATGTCAACAGGTCTACTGCG+AGG | + | chr6_2:77059050-77059069 | Msa0929290:intron | 50.0% | |
| TACTGCGAGGCAGTTACCAA+TGG | + | chr6_2:77059063-77059082 | Msa0929290:CDS | 50.0% | |
| GTTATTGGAGGTGGTCCTAC+AGG | + | chr6_2:77059437-77059456 | Msa0929290:CDS | 50.0% | |
| GCTTCGTTGCATACTGTCGA+AGG | - | chr6_2:77059686-77059705 | None:intergenic | 50.0% | |
| AGTTTGTCTTATGCGGGGTG+TGG | + | chr6_2:77059811-77059830 | Msa0929290:CDS | 50.0% | |
| !! | TTGGTTTGGTCCACAGGAGT+TGG | + | chr6_2:77059896-77059915 | Msa0929290:CDS | 50.0% |
| CTGAATCTTCCAAGCTCTCC+AGG | + | chr6_2:77059941-77059960 | Msa0929290:CDS | 50.0% | |
| AATCTTCCAAGCTCTCCAGG+TGG | + | chr6_2:77059944-77059963 | Msa0929290:CDS | 50.0% | |
| TTTGCACTTGGGGATTGTGC+TGG | + | chr6_2:77060112-77060131 | Msa0929290:CDS | 50.0% | |
| ! | TGAGCTAAAGCTGGAAGCAC+TGG | - | chr6_2:77060160-77060179 | None:intergenic | 50.0% |
| ! | AGTGCTTCCAGCTTTAGCTC+AGG | + | chr6_2:77060159-77060178 | Msa0929290:CDS | 50.0% |
| AGGCTAACCTGAGCTAAAGC+TGG | - | chr6_2:77060169-77060188 | None:intergenic | 50.0% | |
| GCCTGTCAAGTACCCTCTAT+TGG | - | chr6_2:77060289-77060308 | None:intergenic | 50.0% | |
| ! | GGAAAGGCTTTGTCTGCAGA+TGG | + | chr6_2:77060530-77060549 | Msa0929290:CDS | 50.0% |
| TCTGCAGATGGCATCACACT+TGG | + | chr6_2:77060542-77060561 | Msa0929290:CDS | 50.0% | |
| GGCATCAGTAGGTGCCTATA+AGG | + | chr6_2:77060598-77060617 | Msa0929290:CDS | 50.0% | |
| ! | GCAAAGGGATTGTCACTTGC+TGG | + | chr6_2:77060788-77060807 | Msa0929290:CDS | 50.0% |
| !!! | CACTTGCTGGTTTTGTCAGC+TGG | + | chr6_2:77060801-77060820 | Msa0929290:CDS | 50.0% |
| ATCTTACACGTGTGCTGAGC+TGG | + | chr6_2:77060843-77060862 | Msa0929290:CDS | 50.0% | |
| TCTTTGGCAGAGACAACAGC+AGG | + | chr6_2:77060909-77060928 | Msa0929290:CDS | 50.0% | |
| !! | TGGTTGTTCTCGGTACCGGT+TGG | + | chr6_2:77058656-77058675 | Msa0929290:CDS | 55.0% |
| !! | GGTTGTTCTCGGTACCGGTT+GGG | + | chr6_2:77058657-77058676 | Msa0929290:CDS | 55.0% |
| AAACCGACAAGCAGCCCAAC+CGG | - | chr6_2:77058674-77058693 | None:intergenic | 55.0% | |
| AGGTCTGTTGCTGAGCCTGT+TGG | + | chr6_2:77058802-77058821 | Msa0929290:CDS | 55.0% | |
| TGCGAGGCAGTTACCAATGG+TGG | + | chr6_2:77059066-77059085 | Msa0929290:CDS | 55.0% | |
| CTGTCGAAGGCCAACGTCAA+AGG | - | chr6_2:77059673-77059692 | None:intergenic | 55.0% | |
| TCTTATGCGGGGTGTGGTGA+AGG | + | chr6_2:77059817-77059836 | Msa0929290:CDS | 55.0% | |
| !! | GGTCTCTTGGTTTGGTCCAC+AGG | + | chr6_2:77059890-77059909 | Msa0929290:CDS | 55.0% |
| TTCCAAGCTCTCCAGGTGGA+AGG | + | chr6_2:77059948-77059967 | Msa0929290:CDS | 55.0% | |
| TACCTTCCACCTGGAGAGCT+TGG | - | chr6_2:77059953-77059972 | None:intergenic | 55.0% | |
| GGCTTCACATACCTTCCACC+TGG | - | chr6_2:77059962-77059981 | None:intergenic | 55.0% | |
| ATGGATGCGTGTTCCGTCTG+TGG | + | chr6_2:77060081-77060100 | Msa0929290:CDS | 55.0% | |
| CCTGTCAGTGACCAGTGCAT+AGG | - | chr6_2:77060448-77060467 | None:intergenic | 55.0% | |
| ! | CCTATGCACTGGTCACTGAC+AGG | + | chr6_2:77060445-77060464 | Msa0929290:intron | 55.0% |
| ! | ATGGGGAGCATGGCATCAGT+AGG | + | chr6_2:77060587-77060606 | Msa0929290:CDS | 55.0% |
| TTACACGTGTGCTGAGCTGG+AGG | + | chr6_2:77060846-77060865 | Msa0929290:CDS | 55.0% | |
| GTGTGCTGAGCTGGAGGAAT+AGG | + | chr6_2:77060852-77060871 | Msa0929290:CDS | 55.0% | |
| GGCAGAGACAACAGCAGGAT+AGG | + | chr6_2:77060914-77060933 | Msa0929290:CDS | 55.0% | |
| !! | GTACCGGTTGGGCTGCTTGT+CGG | + | chr6_2:77058668-77058687 | Msa0929290:CDS | 60.0% |
| TGGAGGTGGTCCTACAGGAG+TGG | + | chr6_2:77059442-77059461 | Msa0929290:CDS | 60.0% | |
| TATGCGGGGTGTGGTGAAGG+AGG | + | chr6_2:77059820-77059839 | Msa0929290:CDS | 60.0% | |
| CTCAGAGGGACCAACTCCTG+TGG | - | chr6_2:77059909-77059928 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_2 | gene | 77058331 | 77061021 | 77058331 | ID=Msa0929290;Name=Msa0929290 |
| chr6_2 | mRNA | 77058331 | 77061021 | 77058331 | ID=Msa0929290-mRNA-1;Parent=Msa0929290;Name=Msa0929290-mRNA-1;_AED=0.15;_eAED=0.15;_QI=0|1|0.87|1|1|1|8|81|544 |
| chr6_2 | exon | 77058331 | 77058909 | 77058331 | ID=Msa0929290-mRNA-1:exon:13016;Parent=Msa0929290-mRNA-1 |
| chr6_2 | exon | 77059060 | 77059273 | 77059060 | ID=Msa0929290-mRNA-1:exon:13017;Parent=Msa0929290-mRNA-1 |
| chr6_2 | exon | 77059396 | 77059556 | 77059396 | ID=Msa0929290-mRNA-1:exon:13018;Parent=Msa0929290-mRNA-1 |
| chr6_2 | exon | 77059651 | 77059716 | 77059651 | ID=Msa0929290-mRNA-1:exon:13019;Parent=Msa0929290-mRNA-1 |
| chr6_2 | exon | 77059806 | 77059969 | 77059806 | ID=Msa0929290-mRNA-1:exon:13020;Parent=Msa0929290-mRNA-1 |
| chr6_2 | exon | 77060066 | 77060180 | 77060066 | ID=Msa0929290-mRNA-1:exon:13021;Parent=Msa0929290-mRNA-1 |
| chr6_2 | exon | 77060467 | 77060646 | 77060467 | ID=Msa0929290-mRNA-1:exon:13022;Parent=Msa0929290-mRNA-1 |
| chr6_2 | exon | 77060785 | 77061021 | 77060785 | ID=Msa0929290-mRNA-1:exon:13023;Parent=Msa0929290-mRNA-1 |
| chr6_2 | CDS | 77058331 | 77058909 | 77058331 | ID=Msa0929290-mRNA-1:cds;Parent=Msa0929290-mRNA-1 |
| chr6_2 | CDS | 77059060 | 77059273 | 77059060 | ID=Msa0929290-mRNA-1:cds;Parent=Msa0929290-mRNA-1 |
| chr6_2 | CDS | 77059396 | 77059556 | 77059396 | ID=Msa0929290-mRNA-1:cds;Parent=Msa0929290-mRNA-1 |
| chr6_2 | CDS | 77059651 | 77059716 | 77059651 | ID=Msa0929290-mRNA-1:cds;Parent=Msa0929290-mRNA-1 |
| chr6_2 | CDS | 77059806 | 77059969 | 77059806 | ID=Msa0929290-mRNA-1:cds;Parent=Msa0929290-mRNA-1 |
| chr6_2 | CDS | 77060066 | 77060180 | 77060066 | ID=Msa0929290-mRNA-1:cds;Parent=Msa0929290-mRNA-1 |
| chr6_2 | CDS | 77060467 | 77060646 | 77060467 | ID=Msa0929290-mRNA-1:cds;Parent=Msa0929290-mRNA-1 |
| chr6_2 | CDS | 77060785 | 77060940 | 77060785 | ID=Msa0929290-mRNA-1:cds;Parent=Msa0929290-mRNA-1 |
| chr6_2 | three_prime_UTR | 77060941 | 77061021 | 77060941 | ID=Msa0929290-mRNA-1:three_prime_utr;Parent=Msa0929290-mRNA-1 |
| Gene Sequence |
| Protein sequence |
