AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0302730


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0302730 MtrunA17_Chr2g0328891 97.790 362 8 0 1 362 1 362 0.0 720
Msa0302730 MtrunA17_Chr3g0088301 73.389 357 92 2 7 362 35 389 0.0 519
Msa0302730 MtrunA17_Chr4g0040341 72.118 373 88 3 2 361 1 370 0.0 514
Msa0302730 MtrunA17_Chr8g0352031 73.481 362 87 3 8 362 6 365 6.07e-180 503
Msa0302730 MtrunA17_Chr8g0393031 58.947 285 117 0 65 349 17 301 1.05e-126 366
Msa0302730 MtrunA17_Chr3g0135801 40.260 308 172 7 55 355 23 325 3.53e-71 225
Msa0302730 MtrunA17_Chr5g0396801 31.013 316 165 11 54 336 26 321 3.57e-35 131
Msa0302730 MtrunA17_Chr5g0396801 24.876 201 134 4 69 258 144 338 1.28e-11 65.1
Msa0302730 MtrunA17_Chr3g0135861 30.573 314 180 10 62 352 31 329 4.77e-35 131
Msa0302730 MtrunA17_Chr6g0488081 28.094 299 194 6 62 349 15 303 3.90e-34 128
Msa0302730 MtrunA17_Chr8g0347451 31.847 314 157 12 59 336 44 336 2.35e-33 127
Msa0302730 MtrunA17_Chr1g0149111 29.643 280 173 8 66 341 139 398 1.23e-30 120
Msa0302730 MtrunA17_Chr1g0149111 27.962 211 127 5 54 259 221 411 1.39e-16 80.5
Msa0302730 MtrunA17_Chr3g0137941 28.814 295 175 10 69 353 125 394 5.19e-30 119
Msa0302730 MtrunA17_Chr3g0137941 26.941 219 141 4 43 259 193 394 1.75e-17 83.2
Msa0302730 MtrunA17_Chr3g0137941 29.189 185 111 5 171 349 122 292 1.70e-13 71.2
Msa0302730 MtrunA17_Chr7g0240341 29.097 299 195 8 64 352 23 314 1.34e-29 116
Msa0302730 MtrunA17_Chr4g0006851 31.724 290 175 8 66 352 89 358 1.08e-28 114
Msa0302730 MtrunA17_Chr4g0063561 25.839 298 186 8 66 353 123 395 1.07e-26 109
Msa0302730 MtrunA17_Chr4g0063561 27.488 211 131 4 52 259 204 395 4.79e-17 81.6
Msa0302730 MtrunA17_Chr7g0242311 31.047 277 160 8 77 346 98 350 1.61e-26 108
Msa0302730 MtrunA17_Chr5g0436041 27.097 310 206 8 52 352 23 321 4.96e-26 106
Msa0302730 MtrunA17_Chr8g0385571 27.500 280 183 7 66 341 227 490 1.08e-23 102
Msa0302730 MtrunA17_Chr2g0296061 28.013 307 186 9 69 346 18 318 1.77e-23 99.4
Msa0302730 MtrunA17_Chr7g0252401 28.421 285 171 8 66 341 207 467 1.40e-22 98.6
Msa0302730 MtrunA17_Chr3g0131501 27.576 330 205 13 22 341 163 468 1.48e-22 98.6
Msa0302730 MtrunA17_Chr4g0067231 26.074 326 202 9 54 348 4 321 5.95e-22 95.1
Msa0302730 MtrunA17_Chr4g0000261 25.085 295 185 7 65 341 65 341 5.85e-20 90.1
Msa0302730 MtrunA17_Chr7g0241521 24.164 269 195 5 61 327 12 273 2.80e-19 87.0
Msa0302730 MtrunA17_Chr3g0133111 26.481 287 178 9 66 327 6 284 1.17e-18 85.5
Msa0302730 MtrunA17_Chr3g0133111 27.347 245 144 9 7 233 57 285 9.05e-12 65.5
Msa0302730 MtrunA17_Chr3g0115801 27.273 297 168 11 69 341 119 391 6.52e-18 84.3
Msa0302730 MtrunA17_Chr4g0008061 25.166 302 204 9 57 353 6 290 1.22e-17 82.4
Msa0302730 MtrunA17_Chr1g0196921 22.015 268 197 4 64 327 12 271 3.44e-17 81.3
Msa0302730 MtrunA17_Chr1g0196921 29.762 168 110 4 67 233 112 272 1.42e-14 73.6
Msa0302730 MtrunA17_Chr4g0028531 25.592 211 136 5 67 271 116 311 1.02e-15 77.0
Msa0302730 MtrunA17_Chr6g0463041 25.792 221 128 5 164 349 18 237 1.31e-15 75.9
Msa0302730 MtrunA17_Chr6g0488341 25.105 239 158 6 115 349 7 228 2.33e-15 74.7
Msa0302730 MtrunA17_Chr4g0004571 25.833 240 162 6 115 346 55 286 5.78e-15 74.7
Msa0302730 MtrunA17_Chr4g0004571 25.114 219 153 4 34 252 79 286 6.05e-13 68.9
Msa0302730 MtrunA17_Chr2g0331771 23.776 286 201 6 65 346 155 427 1.40e-14 74.7
Msa0302730 MtrunA17_Chr5g0411411 24.832 298 198 9 63 346 6 291 2.98e-14 72.4
Msa0302730 MtrunA17_Chr8g0382201 24.662 296 177 10 69 341 198 470 4.10e-14 73.6
Msa0302730 MtrunA17_Chr5g0412401 21.993 291 195 6 66 327 6 293 7.83e-14 71.6
Msa0302730 MtrunA17_Chr8g0366791 24.915 293 204 7 63 346 6 291 1.05e-13 70.9
Msa0302730 MtrunA17_Chr3g0103681 23.611 288 204 6 53 334 2 279 1.70e-13 70.5
Msa0302730 MtrunA17_Chr3g0103681 27.861 201 127 5 167 353 11 207 1.39e-11 64.7
Msa0302730 MtrunA17_Chr8g0367641 32.558 129 80 3 106 233 165 287 4.94e-12 66.2
Msa0302730 MtrunA17_Chr8g0367641 21.959 296 196 8 66 334 6 293 6.17e-11 62.8
Msa0302730 MtrunA17_Chr7g0219891 28.185 259 148 11 117 351 65 309 1.34e-11 64.7
Msa0302730 MtrunA17_Chr3g0126331 25.442 283 162 11 106 356 125 390 5.58e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0302730 AT5G13490.1 71.279 383 85 3 5 362 3 385 0.0 528
Msa0302730 AT5G13490.2 71.279 383 85 3 5 362 3 385 0.0 528
Msa0302730 AT3G08580.2 72.032 379 79 5 8 362 6 381 0.0 517
Msa0302730 AT3G08580.1 72.032 379 79 5 8 362 6 381 0.0 517
Msa0302730 AT4G28390.1 77.101 345 71 2 17 361 42 378 0.0 515
Msa0302730 AT4G28390.2 77.101 345 71 2 17 361 42 378 0.0 515
Msa0302730 AT5G17400.1 62.500 288 108 0 62 349 10 297 1.19e-131 379
Msa0302730 AT5G56450.1 38.710 310 171 7 52 349 20 322 5.21e-67 214
Msa0302730 AT3G55640.1 28.618 304 200 7 56 350 28 323 1.19e-35 133
Msa0302730 AT3G55640.4 28.618 304 200 7 56 350 28 323 1.19e-35 133
Msa0302730 AT2G37890.1 29.630 297 192 7 65 352 44 332 9.07e-34 128
Msa0302730 AT3G53940.1 31.544 298 183 9 66 352 73 360 3.71e-33 127
Msa0302730 AT1G14560.1 28.470 281 175 6 77 341 38 308 1.60e-31 122
Msa0302730 AT1G14560.2 28.727 275 170 6 77 335 38 302 6.26e-31 119
Msa0302730 AT4G26180.1 30.492 305 186 10 62 352 17 309 6.50e-31 120
Msa0302730 AT4G01100.1 30.255 314 162 11 59 336 35 327 1.41e-30 119
Msa0302730 AT4G01100.1 24.878 205 131 6 69 258 148 344 1.31e-11 65.5
Msa0302730 AT5G01500.1 32.616 279 165 9 77 352 130 388 2.30e-30 120
Msa0302730 AT4G26180.2 31.359 287 172 9 62 335 17 291 3.82e-30 117
Msa0302730 AT3G51870.1 32.155 283 161 11 77 352 102 360 1.03e-28 115
Msa0302730 AT4G01100.2 29.467 319 172 11 59 336 35 341 1.43e-28 114
Msa0302730 AT4G01100.2 24.878 205 131 6 69 258 162 358 1.59e-11 65.5
Msa0302730 AT4G32400.1 30.605 281 169 10 66 341 114 373 2.34e-28 114
Msa0302730 AT4G32400.1 28.571 196 120 5 67 259 208 386 1.13e-13 72.0
Msa0302730 AT4G32400.1 28.962 183 114 5 171 349 114 284 3.32e-12 67.8
Msa0302730 AT4G01100.3 29.373 303 157 11 75 341 1 282 3.62e-27 109
Msa0302730 AT4G01100.3 24.878 205 131 6 69 258 98 294 9.75e-12 65.5
Msa0302730 AT3G21390.1 28.065 310 184 8 69 346 22 324 2.12e-24 102
Msa0302730 AT3G21390.2 28.065 310 184 8 69 346 44 346 2.98e-24 102
Msa0302730 AT3G20240.1 24.916 297 187 7 63 341 49 327 3.00e-24 102
Msa0302730 AT5G48970.1 27.097 310 188 8 69 346 25 328 9.77e-24 100
Msa0302730 AT1G14560.3 30.500 200 121 5 170 352 24 222 4.76e-23 96.7
Msa0302730 AT5G51050.1 28.485 330 199 12 22 341 181 483 2.02e-22 98.6
Msa0302730 AT3G55640.2 26.786 224 151 4 56 274 28 243 6.56e-22 94.0
Msa0302730 AT3G55640.3 26.786 224 151 4 56 274 28 243 6.56e-22 94.0
Msa0302730 AT3G53940.2 31.401 207 126 5 66 266 73 269 1.55e-20 90.9
Msa0302730 AT5G61810.2 26.335 281 177 8 66 341 65 320 2.26e-20 91.3
Msa0302730 AT5G61810.1 26.335 281 177 8 66 341 208 463 8.31e-20 90.9
Msa0302730 AT5G48970.2 27.165 254 154 6 118 346 10 257 1.99e-19 87.4
Msa0302730 AT3G54110.1 24.759 311 204 9 57 357 6 296 2.99e-19 87.4
Msa0302730 AT5G07320.1 25.926 270 174 7 75 341 218 464 5.49e-19 88.6
Msa0302730 AT5G58970.1 23.656 279 198 6 61 334 11 279 2.22e-17 82.0
Msa0302730 AT5G58970.1 29.949 197 119 7 167 349 12 203 1.06e-13 71.6
Msa0302730 AT5G64970.1 26.014 296 173 10 69 341 138 410 7.42e-16 79.0
Msa0302730 AT1G79900.1 28.870 239 147 7 115 346 55 277 2.35e-15 76.3
Msa0302730 AT5G64970.2 26.351 296 172 11 69 341 14 286 3.50e-15 75.9
Msa0302730 AT1G14140.1 23.704 270 199 4 60 327 10 274 3.97e-15 75.5
Msa0302730 AT1G14140.1 28.283 198 124 6 171 356 18 209 8.82e-13 68.6
Msa0302730 AT5G09470.1 27.727 220 143 6 114 327 97 306 4.52e-15 75.9
Msa0302730 AT5G64970.3 26.644 289 166 10 69 334 138 403 4.65e-15 76.3
Msa0302730 AT1G78180.1 25.333 300 170 8 69 341 131 403 2.55e-14 74.3
Msa0302730 AT5G58970.2 29.949 197 119 6 167 349 12 203 9.86e-14 71.2
Msa0302730 AT4G27940.1 23.438 256 178 6 106 345 146 399 1.13e-13 72.0
Msa0302730 AT5G66380.1 29.146 199 119 5 170 356 9 197 1.23e-13 71.2
Msa0302730 AT4G03115.1 23.592 284 171 9 59 327 31 283 5.53e-13 69.3
Msa0302730 AT4G03115.3 23.592 284 171 9 59 327 63 315 6.84e-13 69.3
Msa0302730 AT5G46800.2 25.753 299 193 9 65 346 7 293 2.45e-12 67.4
Msa0302730 AT5G46800.3 25.753 299 193 9 65 346 7 293 2.45e-12 67.4
Msa0302730 AT5G46800.1 25.753 299 193 9 65 346 7 293 2.45e-12 67.4
Msa0302730 AT2G22500.1 25.000 288 179 8 66 327 6 282 3.09e-12 67.0
Msa0302730 AT2G33820.4 28.723 188 118 6 162 341 13 192 6.48e-12 65.9
Msa0302730 AT1G25380.1 22.845 232 160 7 117 339 71 292 1.25e-11 65.9
Msa0302730 AT1G25380.1 28.977 176 113 4 184 352 34 204 1.90e-11 65.1
Msa0302730 AT1G25380.2 22.845 232 160 7 117 339 71 292 1.25e-11 65.9
Msa0302730 AT1G25380.2 28.977 176 113 4 184 352 34 204 1.90e-11 65.1
Msa0302730 AT2G33820.1 21.382 304 222 7 62 356 14 309 2.29e-11 64.7
Msa0302730 AT1G34065.1 22.876 306 181 10 39 333 54 315 8.52e-11 63.2
Msa0302730 AT1G34065.2 22.876 306 181 10 39 333 47 308 9.79e-11 62.8

Find 80 sgRNAs with CRISPR-Local

Find 243 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATAGGTTGTATCCTTTATT+TGG 0.172758 2_3:+59560890 None:intergenic
GCACCTTTGAAGAGAGATTT+TGG 0.201047 2_3:+59556910 None:intergenic
CCATCATCTTATGCTGTATA+AGG 0.215845 2_3:+59556763 None:intergenic
GTGTACCGTGGTTTGTATTT+TGG 0.236923 2_3:-59557917 Msa0302730:CDS
GCTCTTGGTAGGAACGTTTC+AGG 0.238857 2_3:-59557870 Msa0302730:intron
CTTATGTTGGGAAAGAAATA+TGG 0.285268 2_3:-59556820 Msa0302730:CDS
TCCACCTTTCTTCGTGGACT+TGG 0.300851 2_3:+59558045 None:intergenic
AAGGGTATTGGAGATTGTTT+TGG 0.320804 2_3:-59558438 Msa0302730:CDS
CCTCTCTCCACCTTTCTTCG+TGG 0.345988 2_3:+59558039 None:intergenic
AGCAAGAGAGAGATGGATAT+TGG 0.356655 2_3:-59558171 Msa0302730:CDS
GGCTTCAATGTTTCAGTTGT+TGG 0.362007 2_3:-59557947 Msa0302730:CDS
TGTAAAGTACAAGAGTTCTT+TGG 0.375179 2_3:-59556965 Msa0302730:CDS
AAATCAAGATGAGATGATTA+AGG 0.376906 2_3:-59558484 Msa0302730:CDS
ATGAAGGATTTACTTCGCTT+TGG 0.383588 2_3:-59558401 Msa0302730:CDS
AGAAGCTTCACGCGCTCAAT+AGG 0.386608 2_3:+59558513 None:intergenic
TTTGTGCTACTGTTGGGTAT+TGG 0.390598 2_3:+59558736 None:intergenic
AACTGTTTCTGAAACAGAAC+AGG 0.406642 2_3:+59558651 None:intergenic
CTTCGAGCAGTTGCTGGTGC+TGG 0.406961 2_3:-59556874 Msa0302730:CDS
TTCCGTCTTTGTTTACTCGT+TGG 0.409566 2_3:-59558098 Msa0302730:CDS
TTGCAATCAGATGGTATTGC+TGG 0.410642 2_3:-59557980 Msa0302730:CDS
AACATTCTTCGAGCAGTTGC+TGG 0.413671 2_3:-59556880 Msa0302730:CDS
TGCAAGCTATGATAAACTTC+AGG 0.423170 2_3:-59556845 Msa0302730:CDS
GGAAGAACAGTTAAAGATGA+AGG 0.423659 2_3:-59558417 Msa0302730:CDS
CCACATATTGCAAATTCCTA+TGG 0.426920 2_3:-59558687 Msa0302730:CDS
AAACTTCAGGTGCTTATGTT+GGG 0.430704 2_3:-59556832 Msa0302730:CDS
TAGCTAGCTTTGCCCTAGGA+TGG 0.434987 2_3:-59557068 Msa0302730:CDS
CCAACAGTAGCACAAAAGTT+TGG 0.442652 2_3:-59558729 Msa0302730:CDS
GGATATTGGAAAGTCTTTGC+AGG 0.443053 2_3:-59558157 Msa0302730:CDS
TTCTCTTAAGCCAGTGCTCT+TGG 0.444590 2_3:-59557885 Msa0302730:CDS
CAACTGTAACAGCCCATCCT+AGG 0.444717 2_3:+59557055 None:intergenic
TCTGAGCCTTACAAGGGTAT+TGG 0.448802 2_3:-59558450 Msa0302730:CDS
ATTGCATCTGGTGCTGCAGC+AGG 0.453223 2_3:-59558130 Msa0302730:CDS
ATATTCCATCAGCCAAATAA+AGG 0.461799 2_3:-59560902 Msa0302730:five_prime_UTR
TTGGGAAAGAAATATGGTTC+TGG 0.461893 2_3:-59556814 Msa0302730:CDS
TGGAACAAACACTGCATTTG+AGG 0.462013 2_3:+59558623 None:intergenic
TTTGCAGGAAATATTGCATC+TGG 0.462558 2_3:-59558142 Msa0302730:CDS
TGTATCCTTTATTTGGCTGA+TGG 0.465555 2_3:+59560897 None:intergenic
GCCAAACCTGACTGAAAGAT+AGG 0.471436 2_3:+59560873 None:intergenic
TGGACTTGGCGTCGCTTGCA+AGG 0.475415 2_3:+59558059 None:intergenic
CAATCTCCAATACCCTTGTA+AGG 0.475979 2_3:+59558444 None:intergenic
AGCTAGCTTTGCCCTAGGAT+GGG 0.478146 2_3:-59557067 Msa0302730:CDS
ATACAACCTATCTTTCAGTC+AGG 0.481381 2_3:-59560879 Msa0302730:intron
AAATCTCTCTTCAAAGGTGC+TGG 0.485223 2_3:-59556907 Msa0302730:CDS
TAAACTTCAGGTGCTTATGT+TGG 0.486307 2_3:-59556833 Msa0302730:CDS
CCATAGGAATTTGCAATATG+TGG 0.487479 2_3:+59558687 None:intergenic
CATTGATGATGGCTGATAAG+AGG 0.495678 2_3:-59558761 Msa0302730:exon
GACGCCAAGTCCACGAAGAA+AGG 0.496546 2_3:-59558049 Msa0302730:CDS
TTCCTAGCTAGCTTTGCCCT+AGG 0.508251 2_3:-59557072 Msa0302730:CDS
TAGGCTCTCTGAGCCTTACA+AGG 0.509331 2_3:-59558457 Msa0302730:CDS
AGAAGAATGATGATGACATC+AGG 0.514497 2_3:-59556994 Msa0302730:CDS
ATTTGAAAGGAAACCTGTGT+TGG 0.521968 2_3:+59558345 None:intergenic
TCACAAATTGTGAAAACTGA+AGG 0.528718 2_3:-59556934 Msa0302730:CDS
CTTCTACGAACAGTGTCTAA+AGG 0.537254 2_3:+59557012 None:intergenic
ATCCTAGGGCAAAGCTAGCT+AGG 0.537911 2_3:+59557070 None:intergenic
CTTAAGCCAGTGCTCTTGGT+AGG 0.545019 2_3:-59557881 Msa0302730:CDS
GGTCCAAAATCTCTCTTCAA+AGG 0.557932 2_3:-59556913 Msa0302730:CDS
CAAGATGAGATGATTAAGGC+TGG 0.558576 2_3:-59558480 Msa0302730:CDS
CCTTATACAGCATAAGATGA+TGG 0.560896 2_3:-59556763 Msa0302730:three_prime_UTR
GGTGGAGAGAGGCAATTCAA+TGG 0.564939 2_3:-59558028 Msa0302730:CDS
AACTTCAAGCAAGAGAGAGA+TGG 0.570273 2_3:-59558178 Msa0302730:CDS
CTAGGATGGGCTGTTACAGT+TGG 0.574759 2_3:-59557054 Msa0302730:CDS
AGCACTCAAAGCATTGATGA+TGG 0.577209 2_3:-59558772 Msa0302730:exon
CATATTGCAAATTCCTATGG+AGG 0.577721 2_3:-59558684 Msa0302730:CDS
GAACAAAAGATCTGATCTTG+TGG 0.579459 2_3:+59560925 None:intergenic
GGAAAGAAATATGGTTCTGG+TGG 0.583008 2_3:-59556811 Msa0302730:CDS
AAACCTGTGTTGGAAAGTAA+CGG 0.584984 2_3:+59558355 None:intergenic
ATGAGATGATTAAGGCTGGT+AGG 0.586726 2_3:-59558476 Msa0302730:CDS
AAGAAGACATTGCAATCAGA+TGG 0.590470 2_3:-59557989 Msa0302730:CDS
AACTGTAACAGCCCATCCTA+GGG 0.595417 2_3:+59557056 None:intergenic
GGATTTACTTCGCTTTGGAG+AGG 0.595722 2_3:-59558396 Msa0302730:CDS
AAAGTAACGGATAACATTGA+CGG 0.603182 2_3:+59558368 None:intergenic
GCCAAGTCCACGAAGAAAGG+TGG 0.603618 2_3:-59558046 Msa0302730:CDS
GGTATTGCTGGTCTTTATCG+CGG 0.608830 2_3:-59557968 Msa0302730:CDS
AACGTTCCTACCAAGAGCAC+TGG 0.609300 2_3:+59557875 None:intergenic
ATCCAACGAGTAAACAAAGA+CGG 0.620833 2_3:+59558096 None:intergenic
TATCCGTTACTTTCCAACAC+AGG 0.620843 2_3:-59558358 Msa0302730:intron
CCACGAAGAAAGGTGGAGAG+AGG 0.629455 2_3:-59558039 Msa0302730:CDS
ACAGTCCAAAATACAAACCA+CGG 0.665396 2_3:+59557912 None:intergenic
GTTGGAATCATTGTGTACCG+TGG 0.672437 2_3:-59557929 Msa0302730:CDS
AGGCTCTCTGAGCCTTACAA+GGG 0.675743 2_3:-59558456 Msa0302730:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTGAAATATTCATAATTTT+CGG + chr2_3:59557221-59557240 None:intergenic 10.0%
!! AAATTATGAATATTTCAAAA+AGG - chr2_3:59557222-59557241 Msa0302730:intron 10.0%
!!! AAATTTTTAAAATATTGGTA+GGG - chr2_3:59560257-59560276 Msa0302730:intron 10.0%
!!! ATATTATTTTACAAAATTTC+AGG - chr2_3:59560473-59560492 Msa0302730:intron 10.0%
!!! AAATTGATTATTTTTTTCTT+TGG - chr2_3:59560864-59560883 Msa0302730:intron 10.0%
!!! TTGAAATATTCATAATTTTC+GGG + chr2_3:59557220-59557239 None:intergenic 15.0%
!!! AATGAAGTATTAAATGATTA+AGG - chr2_3:59557692-59557711 Msa0302730:intron 15.0%
!! TAAATGATTAAGGTTATTAT+AGG - chr2_3:59557702-59557721 Msa0302730:intron 15.0%
!! CAACAAAAAAACTAAATTTA+AGG + chr2_3:59558435-59558454 None:intergenic 15.0%
!! TAATTATGTTATGTACTTTA+AGG + chr2_3:59558720-59558739 None:intergenic 15.0%
!! TATATTAAAAAGTAGAAAAC+CGG - chr2_3:59560134-59560153 Msa0302730:intron 15.0%
!!! TCGTCAAATTTTTAAAATAT+TGG - chr2_3:59560252-59560271 Msa0302730:intron 15.0%
!!! CAAATTTTTAAAATATTGGT+AGG - chr2_3:59560256-59560275 Msa0302730:intron 15.0%
!!! AATTTTTAAAATATTGGTAG+GGG - chr2_3:59560258-59560277 Msa0302730:intron 15.0%
!! TCATATTAAATCATACTCAA+GGG + chr2_3:59556809-59556828 None:intergenic 20.0%
!! TTCATATTAAATCATACTCA+AGG + chr2_3:59556810-59556829 None:intergenic 20.0%
!!! ATTAAGTTGTTTATTCAAAC+TGG + chr2_3:59556871-59556890 None:intergenic 20.0%
!! AAAGTTAAGGACAAATTTAA+TGG - chr2_3:59557374-59557393 Msa0302730:intron 20.0%
!! TGTAAAAGTGACAATTATAA+AGG + chr2_3:59557563-59557582 None:intergenic 20.0%
!! TAAATATCTAAGGGTAATAT+AGG + chr2_3:59557650-59557669 None:intergenic 20.0%
!! TCTCTACAATAAATATCTAA+GGG + chr2_3:59557659-59557678 None:intergenic 20.0%
!! TCAAAATGTGACAATTAAAA+AGG - chr2_3:59557788-59557807 Msa0302730:intron 20.0%
!! TATTATTATAGTGAAAAGGT+TGG + chr2_3:59557830-59557849 None:intergenic 20.0%
!! TGGTTATTATTATAGTGAAA+AGG + chr2_3:59557834-59557853 None:intergenic 20.0%
!!! GGCTGATTTATTTTAATATA+TGG - chr2_3:59558155-59558174 Msa0302730:CDS 20.0%
!! ACTAAATTTAAGGATCTAAA+CGG + chr2_3:59558425-59558444 None:intergenic 20.0%
!! TAAGGAAATAATGAAAACTT+AGG + chr2_3:59558702-59558721 None:intergenic 20.0%
!!! ACTGCATTAATTATTTCTTT+AGG - chr2_3:59559256-59559275 Msa0302730:intron 20.0%
!! TAACATGATTAATCTATTAC+AGG - chr2_3:59559331-59559350 Msa0302730:intron 20.0%
!! AAAGAGAAAAAAGTTAGTTA+AGG - chr2_3:59559897-59559916 Msa0302730:intron 20.0%
!! AATTTGACGAAACAAAAATT+TGG + chr2_3:59560242-59560261 None:intergenic 20.0%
!!! ATAGTTTGCTGAATATTTTT+TGG - chr2_3:59560916-59560935 Msa0302730:five_prime_UTR 20.0%
!! ACAATTTTTACAAGCTATCA+CGG - chr2_3:59556972-59556991 Msa0302730:CDS 25.0%
!!! TCTCAAATAAAAAAGGTATC+TGG + chr2_3:59557345-59557364 None:intergenic 25.0%
! AAATTTGTCCTTAACTTTGT+AGG + chr2_3:59557372-59557391 None:intergenic 25.0%
!!! TTTGAACATAGTGTTTTAGT+AGG - chr2_3:59557415-59557434 Msa0302730:intron 25.0%
! AAGTGACAATTATAAAGGAA+CGG + chr2_3:59557558-59557577 None:intergenic 25.0%
! AACCACATTTAATGATACAT+TGG + chr2_3:59557624-59557643 None:intergenic 25.0%
! CTCTCTACAATAAATATCTA+AGG + chr2_3:59557660-59557679 None:intergenic 25.0%
!!! AGTAAAAGTATTTGTTGTCT+TGG - chr2_3:59557752-59557771 Msa0302730:intron 25.0%
! ATGTGACAATTAAAAAGGAA+CGG - chr2_3:59557793-59557812 Msa0302730:intron 25.0%
!! TAGTGACATATATGTTTCTA+AGG - chr2_3:59557904-59557923 Msa0302730:CDS 25.0%
!! TGTTATTTGAACAACCAATT+TGG - chr2_3:59557957-59557976 Msa0302730:CDS 25.0%
!!! ACTTTTTCCTTTGTAAAGTA+TGG + chr2_3:59558001-59558020 None:intergenic 25.0%
! ATACTTTACAAAGGAAAAAG+TGG - chr2_3:59558000-59558019 Msa0302730:CDS 25.0%
!! TCATTTCTCTTAACTTTTGT+AGG - chr2_3:59558126-59558145 Msa0302730:CDS 25.0%
!! AGTCATATCGTTGAATTTTA+AGG - chr2_3:59558249-59558268 Msa0302730:intron 25.0%
!!! TAATTTCTAGGTGGATTATA+AGG + chr2_3:59558609-59558628 None:intergenic 25.0%
!!! TAGCCTAACATAATTTGTTT+TGG - chr2_3:59558738-59558757 Msa0302730:CDS 25.0%
! AAATCAAGATGAGATGATTA+AGG - chr2_3:59559089-59559108 Msa0302730:intron 25.0%
! AATGCAGTTGAAAATTTGAA+AGG + chr2_3:59559244-59559263 None:intergenic 25.0%
! CGAAAATGTAATTTAGACAT+TGG + chr2_3:59559282-59559301 None:intergenic 25.0%
! AGATTAATCATGTTAGACAT+TGG + chr2_3:59559326-59559345 None:intergenic 25.0%
!!! CGATGTTTTAAAATCCAAAT+CGG - chr2_3:59560020-59560039 Msa0302730:intron 25.0%
! AATCAGAATGTGTTACAATT+AGG - chr2_3:59560194-59560213 Msa0302730:intron 25.0%
!!! TATTTTAGAGCAGCAAATTT+TGG + chr2_3:59560456-59560475 None:intergenic 25.0%
ATATTCCATCAGCCAAATAA+AGG - chr2_3:59556671-59556690 Msa0302730:three_prime_UTR 30.0%
GATAGGTTGTATCCTTTATT+TGG + chr2_3:59556686-59556705 None:intergenic 30.0%
CATGTAACTTAACACAAACA+TGG + chr2_3:59556754-59556773 None:intergenic 30.0%
ATCATACTCAAGGGTTTAAA+AGG + chr2_3:59556800-59556819 None:intergenic 30.0%
! GCTCAAAGTGTTTATCTATA+TGG - chr2_3:59556895-59556914 Msa0302730:CDS 30.0%
CCTTTGATTCCAATACATAA+TGG + chr2_3:59557145-59557164 None:intergenic 30.0%
CCATTATGTATTGGAATCAA+AGG - chr2_3:59557142-59557161 Msa0302730:intron 30.0%
!! AAAATCAGAGACTAGTTTGA+TGG + chr2_3:59557176-59557195 None:intergenic 30.0%
TTTGTGAAATGCTTTCAAAC+AGG - chr2_3:59557193-59557212 Msa0302730:intron 30.0%
AAAAGGTTAAACAGTCAAGT+TGG - chr2_3:59557239-59557258 Msa0302730:intron 30.0%
AGGACACTCTCAAATAAAAA+AGG + chr2_3:59557352-59557371 None:intergenic 30.0%
!!! GTGTTTTAGTAGGTTTAACA+AGG - chr2_3:59557425-59557444 Msa0302730:intron 30.0%
! AACTTTTCAGATTTCAAGGT+CGG + chr2_3:59557452-59557471 None:intergenic 30.0%
! GTGTAACTTTTCAGATTTCA+AGG + chr2_3:59557456-59557475 None:intergenic 30.0%
TATGGACATGATGATCAAAT+TGG - chr2_3:59557501-59557520 Msa0302730:intron 30.0%
GTCCAATGTATCATTAAATG+TGG - chr2_3:59557619-59557638 Msa0302730:intron 30.0%
CAAATAAGTTGTCACCAAAT+TGG + chr2_3:59557974-59557993 None:intergenic 30.0%
TTGACAACCATACTTTACAA+AGG - chr2_3:59557991-59558010 Msa0302730:CDS 30.0%
! TCTCTTAACTTTTGTAGGTT+AGG - chr2_3:59558131-59558150 Msa0302730:CDS 30.0%
TGAACTCAATGCAATATGAT+TGG - chr2_3:59558198-59558217 Msa0302730:CDS 30.0%
CACCTATAAGTAGAAATGTA+GGG - chr2_3:59558384-59558403 Msa0302730:CDS 30.0%
AATTAACACAAGCTGTCAAT+TGG - chr2_3:59558624-59558643 Msa0302730:CDS 30.0%
GCACCAAAACAAATTATGTT+AGG + chr2_3:59558744-59558763 None:intergenic 30.0%
!! AAAGTAACGGATAACATTGA+CGG + chr2_3:59559208-59559227 None:intergenic 30.0%
CCATAGTAAGACAATCTTTA+AGG + chr2_3:59559788-59559807 None:intergenic 30.0%
CCTTAAAGATTGTCTTACTA+TGG - chr2_3:59559785-59559804 Msa0302730:intron 30.0%
AGATTGTCTTACTATGGATT+TGG - chr2_3:59559791-59559810 Msa0302730:intron 30.0%
CCTCTTCTATTTATCCTTTA+AGG + chr2_3:59559866-59559885 None:intergenic 30.0%
CCTTAAAGGATAAATAGAAG+AGG - chr2_3:59559863-59559882 Msa0302730:intron 30.0%
! GATGAAGATTTTGAACATGA+CGG - chr2_3:59559919-59559938 Msa0302730:intron 30.0%
ATATTCACTCATAAGTGAGT+AGG - chr2_3:59559994-59560013 Msa0302730:intron 30.0%
TATTCACTCATAAGTGAGTA+GGG - chr2_3:59559995-59560014 Msa0302730:intron 30.0%
ACTGTAGTTGAACTATGATT+AGG + chr2_3:59560066-59560085 None:intergenic 30.0%
TAACCTTATGAATTGCATAG+CGG - chr2_3:59560321-59560340 Msa0302730:intron 30.0%
! AATTGTGTCAACATTTTCGA+CGG + chr2_3:59560369-59560388 None:intergenic 30.0%
TGTAAAGTACAAGAGTTCTT+TGG - chr2_3:59560608-59560627 Msa0302730:intron 30.0%
TCACAAATTGTGAAAACTGA+AGG - chr2_3:59560639-59560658 Msa0302730:intron 30.0%
CTTATGTTGGGAAAGAAATA+TGG - chr2_3:59560753-59560772 Msa0302730:intron 30.0%
GAACAAAAGATCTGATCTTG+TGG + chr2_3:59556651-59556670 None:intergenic 35.0%
! TGTATCCTTTATTTGGCTGA+TGG + chr2_3:59556679-59556698 None:intergenic 35.0%
ATACAACCTATCTTTCAGTC+AGG - chr2_3:59556694-59556713 Msa0302730:three_prime_UTR 35.0%
GGGTTTAAAAGGAGAAAACA+AGG + chr2_3:59556789-59556808 None:intergenic 35.0%
AAGTCTAGACATGAGTAACA+CGG + chr2_3:59556844-59556863 None:intergenic 35.0%
TGTTACTCATGTCTAGACTT+AGG - chr2_3:59556844-59556863 Msa0302730:CDS 35.0%
ACTCTCAAGCCATTATGTAT+TGG - chr2_3:59557133-59557152 Msa0302730:intron 35.0%
TCCCTAGTATACTCTCATAA+GGG - chr2_3:59557294-59557313 Msa0302730:intron 35.0%
TGTCCATACAAAAACCAGAA+CGG + chr2_3:59557489-59557508 None:intergenic 35.0%
GACAATTATAAAGGAACGGA+GGG + chr2_3:59557554-59557573 None:intergenic 35.0%
TGACAATTATAAAGGAACGG+AGG + chr2_3:59557555-59557574 None:intergenic 35.0%
TGACAATTAAAAAGGAACGG+AGG - chr2_3:59557796-59557815 Msa0302730:intron 35.0%
GACAATTAAAAAGGAACGGA+GGG - chr2_3:59557797-59557816 Msa0302730:intron 35.0%
! CTTAACTTTTGTAGGTTAGG+TGG - chr2_3:59558134-59558153 Msa0302730:CDS 35.0%
GTGTATGTCCTATTCCTATA+TGG - chr2_3:59558304-59558323 Msa0302730:intron 35.0%
TCCTATTCCTATATGGTCTA+TGG - chr2_3:59558311-59558330 Msa0302730:intron 35.0%
ACCATAGACCATATAGGAAT+AGG + chr2_3:59558315-59558334 None:intergenic 35.0%
CCTACATTTCTACTTATAGG+TGG + chr2_3:59558386-59558405 None:intergenic 35.0%
CCACCTATAAGTAGAAATGT+AGG - chr2_3:59558383-59558402 Msa0302730:CDS 35.0%
GACCCTACATTTCTACTTAT+AGG + chr2_3:59558389-59558408 None:intergenic 35.0%
!! TGTTTTTCAAACATCGTCCA+CGG - chr2_3:59558559-59558578 Msa0302730:CDS 35.0%
! AGCTTGTGTTAATTTCTAGG+TGG + chr2_3:59558618-59558637 None:intergenic 35.0%
GACAGCTTGTGTTAATTTCT+AGG + chr2_3:59558621-59558640 None:intergenic 35.0%
!! CAAACTTTTGTGCTACTGTT+GGG + chr2_3:59558846-59558865 None:intergenic 35.0%
CCATAGGAATTTGCAATATG+TGG + chr2_3:59558889-59558908 None:intergenic 35.0%
CCACATATTGCAAATTCCTA+TGG - chr2_3:59558886-59558905 Msa0302730:intron 35.0%
CATATTGCAAATTCCTATGG+AGG - chr2_3:59558889-59558908 Msa0302730:intron 35.0%
!! AACTGTTTCTGAAACAGAAC+AGG + chr2_3:59558925-59558944 None:intergenic 35.0%
! AAGTTTTTCTCTGATGGAGA+TGG + chr2_3:59558973-59558992 None:intergenic 35.0%
! CTTGCAAAGTTTTTCTCTGA+TGG + chr2_3:59558979-59558998 None:intergenic 35.0%
!! TTTGCGACTGATTTTCTCAT+GGG - chr2_3:59559000-59559019 Msa0302730:intron 35.0%
!!! AAGGGTATTGGAGATTGTTT+TGG - chr2_3:59559135-59559154 Msa0302730:intron 35.0%
GGAAGAACAGTTAAAGATGA+AGG - chr2_3:59559156-59559175 Msa0302730:intron 35.0%
ATGAAGGATTTACTTCGCTT+TGG - chr2_3:59559172-59559191 Msa0302730:intron 35.0%
AAACCTGTGTTGGAAAGTAA+CGG + chr2_3:59559221-59559240 None:intergenic 35.0%
ATTTGAAAGGAAACCTGTGT+TGG + chr2_3:59559231-59559250 None:intergenic 35.0%
! CGCTTTGTTGTGTGTTAATT+AGG - chr2_3:59559300-59559319 Msa0302730:intron 35.0%
TTTGCAGGAAATATTGCATC+TGG - chr2_3:59559431-59559450 Msa0302730:intron 35.0%
ATCCAACGAGTAAACAAAGA+CGG + chr2_3:59559480-59559499 None:intergenic 35.0%
AAGAAGACATTGCAATCAGA+TGG - chr2_3:59559584-59559603 Msa0302730:intron 35.0%
ACAGTCCAAAATACAAACCA+CGG + chr2_3:59559664-59559683 None:intergenic 35.0%
ACCAATACGCAGAAAAAATG+TGG - chr2_3:59559830-59559849 Msa0302730:intron 35.0%
CCAATACGCAGAAAAAATGT+GGG - chr2_3:59559831-59559850 Msa0302730:intron 35.0%
ATTCACTCATAAGTGAGTAG+GGG - chr2_3:59559996-59560015 Msa0302730:intron 35.0%
CACTAGTTCAATTTCCGATT+TGG + chr2_3:59560037-59560056 None:intergenic 35.0%
GTAGTTGAACTATGATTAGG+AGG + chr2_3:59560063-59560082 None:intergenic 35.0%
!! TGAAGTCTTGTTTGTTCAAC+CGG + chr2_3:59560156-59560175 None:intergenic 35.0%
GTAACACATTCTGATTGAAC+CGG + chr2_3:59560190-59560209 None:intergenic 35.0%
TTTCCGCTATGCAATTCATA+AGG + chr2_3:59560327-59560346 None:intergenic 35.0%
GTCGAAAATGTTGACACAAT+TGG - chr2_3:59560368-59560387 Msa0302730:intron 35.0%
TGTTGACACAATTGGAGTAT+TGG - chr2_3:59560376-59560395 Msa0302730:intron 35.0%
! AGAAGAATGATGATGACATC+AGG - chr2_3:59560579-59560598 Msa0302730:intron 35.0%
TGCAAGCTATGATAAACTTC+AGG - chr2_3:59560728-59560747 Msa0302730:intron 35.0%
TAAACTTCAGGTGCTTATGT+TGG - chr2_3:59560740-59560759 Msa0302730:intron 35.0%
AAACTTCAGGTGCTTATGTT+GGG - chr2_3:59560741-59560760 Msa0302730:intron 35.0%
TTGGGAAAGAAATATGGTTC+TGG - chr2_3:59560759-59560778 Msa0302730:intron 35.0%
CCATCATCTTATGCTGTATA+AGG + chr2_3:59560813-59560832 None:intergenic 35.0%
CCTTATACAGCATAAGATGA+TGG - chr2_3:59560810-59560829 Msa0302730:intron 35.0%
ACCTATCTTTCAGTCAGGTT+TGG - chr2_3:59556699-59556718 Msa0302730:three_prime_UTR 40.0%
AAGCTATCACGGAGAACTTA+TGG - chr2_3:59556983-59557002 Msa0302730:CDS 40.0%
GGCTTGAGAGTTGAAAGTAA+GGG + chr2_3:59557124-59557143 None:intergenic 40.0%
TGGCTTGAGAGTTGAAAGTA+AGG + chr2_3:59557125-59557144 None:intergenic 40.0%
GTCCCTAGTATACTCTCATA+AGG - chr2_3:59557293-59557312 Msa0302730:intron 40.0%
! GCCCTTATGAGAGTATACTA+GGG + chr2_3:59557298-59557317 None:intergenic 40.0%
! AGCCCTTATGAGAGTATACT+AGG + chr2_3:59557299-59557318 None:intergenic 40.0%
!! GAGAGTGTCCTACAAAGTTA+AGG - chr2_3:59557361-59557380 Msa0302730:intron 40.0%
!!! TGTCCGTTCTGGTTTTTGTA+TGG - chr2_3:59557483-59557502 Msa0302730:intron 40.0%
CCTAGGCACATAAATATGCT+TGG + chr2_3:59557854-59557873 None:intergenic 40.0%
CCAAGCATATTTATGTGCCT+AGG - chr2_3:59557851-59557870 Msa0302730:intron 40.0%
GCATATTTATGTGCCTAGGA+AGG - chr2_3:59557855-59557874 Msa0302730:intron 40.0%
TATTTATGTGCCTAGGAAGG+TGG - chr2_3:59557858-59557877 Msa0302730:intron 40.0%
ATTTATGTGCCTAGGAAGGT+GGG - chr2_3:59557859-59557878 Msa0302730:intron 40.0%
AAGGTGGGTCATATCTCATA+TGG - chr2_3:59557874-59557893 Msa0302730:CDS 40.0%
CAAATAGCAGCACATTCATC+AGG + chr2_3:59558276-59558295 None:intergenic 40.0%
CCTATATGGTCTATGGTGAA+CGG - chr2_3:59558318-59558337 Msa0302730:intron 40.0%
GGATCTAAACGGTAAAGATG+CGG + chr2_3:59558414-59558433 None:intergenic 40.0%
TCTCTGTAAGTAGTAGCTCA+TGG + chr2_3:59558510-59558529 None:intergenic 40.0%
!! AGGTGAAGAAGTGTCACATA+TGG + chr2_3:59558589-59558608 None:intergenic 40.0%
!! AGCACTCAAAGCATTGATGA+TGG - chr2_3:59558801-59558820 Msa0302730:five_prime_UTR 40.0%
!! CATTGATGATGGCTGATAAG+AGG - chr2_3:59558812-59558831 Msa0302730:intron 40.0%
! TTTGTGCTACTGTTGGGTAT+TGG + chr2_3:59558840-59558859 None:intergenic 40.0%
!! CCAAACTTTTGTGCTACTGT+TGG + chr2_3:59558847-59558866 None:intergenic 40.0%
CCAACAGTAGCACAAAAGTT+TGG - chr2_3:59558844-59558863 Msa0302730:intron 40.0%
! AGGTTTTTCTGAACCTCCAT+AGG + chr2_3:59558905-59558924 None:intergenic 40.0%
TGGAACAAACACTGCATTTG+AGG + chr2_3:59558953-59558972 None:intergenic 40.0%
!! CTTTGCGACTGATTTTCTCA+TGG - chr2_3:59558999-59559018 Msa0302730:intron 40.0%
CAAGATGAGATGATTAAGGC+TGG - chr2_3:59559093-59559112 Msa0302730:intron 40.0%
ATGAGATGATTAAGGCTGGT+AGG - chr2_3:59559097-59559116 Msa0302730:intron 40.0%
CAATCTCCAATACCCTTGTA+AGG + chr2_3:59559132-59559151 None:intergenic 40.0%
! TATCCGTTACTTTCCAACAC+AGG - chr2_3:59559215-59559234 Msa0302730:intron 40.0%
AACTTCAAGCAAGAGAGAGA+TGG - chr2_3:59559395-59559414 Msa0302730:intron 40.0%
AGCAAGAGAGAGATGGATAT+TGG - chr2_3:59559402-59559421 Msa0302730:intron 40.0%
GGATATTGGAAAGTCTTTGC+AGG - chr2_3:59559416-59559435 Msa0302730:intron 40.0%
! TTCCGTCTTTGTTTACTCGT+TGG - chr2_3:59559475-59559494 Msa0302730:intron 40.0%
TTGCAATCAGATGGTATTGC+TGG - chr2_3:59559593-59559612 Msa0302730:intron 40.0%
GGCTTCAATGTTTCAGTTGT+TGG - chr2_3:59559626-59559645 Msa0302730:intron 40.0%
!! GTGTACCGTGGTTTGTATTT+TGG - chr2_3:59559656-59559675 Msa0302730:intron 40.0%
!!! CGTATTGGTTTTGACATGAG+AGG + chr2_3:59559819-59559838 None:intergenic 40.0%
!!! CCCACATTTTTTCTGCGTAT+TGG + chr2_3:59559834-59559853 None:intergenic 40.0%
ATACGCAGAAAAAATGTGGG+AGG - chr2_3:59559834-59559853 Msa0302730:intron 40.0%
! GTGGGAGGTTTTTACCTTAA+AGG - chr2_3:59559849-59559868 Msa0302730:intron 40.0%
AGACTTCAACCAGTTCAATC+CGG - chr2_3:59560168-59560187 Msa0302730:intron 40.0%
AATTTGGACAGATCGCTGTT+TGG + chr2_3:59560226-59560245 None:intergenic 40.0%
CTTCTACGAACAGTGTCTAA+AGG + chr2_3:59560564-59560583 None:intergenic 40.0%
GGTCCAAAATCTCTCTTCAA+AGG - chr2_3:59560660-59560679 Msa0302730:intron 40.0%
!! GCACCTTTGAAGAGAGATTT+TGG + chr2_3:59560666-59560685 None:intergenic 40.0%
! AAATCTCTCTTCAAAGGTGC+TGG - chr2_3:59560666-59560685 Msa0302730:intron 40.0%
!! GGAAAGAAATATGGTTCTGG+TGG - chr2_3:59560762-59560781 Msa0302730:intron 40.0%
GCCAAACCTGACTGAAAGAT+AGG + chr2_3:59556703-59556722 None:intergenic 45.0%
! ACACATGATGATGTCCGTTC+TGG - chr2_3:59557472-59557491 Msa0302730:intron 45.0%
CCGTTCACCATAGACCATAT+AGG + chr2_3:59558321-59558340 None:intergenic 45.0%
GACTGAGACGGTGACATAAT+TGG + chr2_3:59558471-59558490 None:intergenic 45.0%
ACGTGTTGTCATGACTGAGA+CGG + chr2_3:59558483-59558502 None:intergenic 45.0%
GTGTCACATATGGTATACCG+TGG + chr2_3:59558579-59558598 None:intergenic 45.0%
! TCTGAGCCTTACAAGGGTAT+TGG - chr2_3:59559123-59559142 Msa0302730:intron 45.0%
!! GGATTTACTTCGCTTTGGAG+AGG - chr2_3:59559177-59559196 Msa0302730:intron 45.0%
!! GGTATTGCTGGTCTTTATCG+CGG - chr2_3:59559605-59559624 Msa0302730:intron 45.0%
GTTGGAATCATTGTGTACCG+TGG - chr2_3:59559644-59559663 Msa0302730:intron 45.0%
TTCTCTTAAGCCAGTGCTCT+TGG - chr2_3:59559688-59559707 Msa0302730:intron 45.0%
! GAACGTTTCAGGTAAGAGTG+AGG - chr2_3:59559714-59559733 Msa0302730:intron 45.0%
CTGATTGAACCGGATTGAAC+TGG + chr2_3:59560180-59560199 None:intergenic 45.0%
GGTAGGGGCAGATTAAATCA+TGG - chr2_3:59560273-59560292 Msa0302730:intron 45.0%
! CAACATTTTCGACGGTAGAG+TGG + chr2_3:59560361-59560380 None:intergenic 45.0%
AACTGTAACAGCCCATCCTA+GGG + chr2_3:59560520-59560539 None:intergenic 45.0%
AACATTCTTCGAGCAGTTGC+TGG - chr2_3:59560693-59560712 Msa0302730:intron 45.0%
GAGATATGACCCACCTTCCT+AGG + chr2_3:59557871-59557890 None:intergenic 50.0%
!! GCGACTGATTTTCTCATGGG+TGG - chr2_3:59559003-59559022 Msa0302730:intron 50.0%
AGAAGCTTCACGCGCTCAAT+AGG + chr2_3:59559063-59559082 None:intergenic 50.0%
TAGGCTCTCTGAGCCTTACA+AGG - chr2_3:59559116-59559135 Msa0302730:intron 50.0%
AGGCTCTCTGAGCCTTACAA+GGG - chr2_3:59559117-59559136 Msa0302730:intron 50.0%
TCCACCTTTCTTCGTGGACT+TGG + chr2_3:59559531-59559550 None:intergenic 50.0%
GGTGGAGAGAGGCAATTCAA+TGG - chr2_3:59559545-59559564 Msa0302730:intron 50.0%
CTTAAGCCAGTGCTCTTGGT+AGG - chr2_3:59559692-59559711 Msa0302730:intron 50.0%
! AACGTTCCTACCAAGAGCAC+TGG + chr2_3:59559701-59559720 None:intergenic 50.0%
GCTCTTGGTAGGAACGTTTC+AGG - chr2_3:59559703-59559722 Msa0302730:intron 50.0%
!! TTCCTAGCTAGCTTTGCCCT+AGG - chr2_3:59560501-59560520 Msa0302730:intron 50.0%
ATCCTAGGGCAAAGCTAGCT+AGG + chr2_3:59560506-59560525 None:intergenic 50.0%
!! TAGCTAGCTTTGCCCTAGGA+TGG - chr2_3:59560505-59560524 Msa0302730:intron 50.0%
!! AGCTAGCTTTGCCCTAGGAT+GGG - chr2_3:59560506-59560525 Msa0302730:intron 50.0%
CAACTGTAACAGCCCATCCT+AGG + chr2_3:59560521-59560540 None:intergenic 50.0%
!! CTAGGATGGGCTGTTACAGT+TGG - chr2_3:59560519-59560538 Msa0302730:intron 50.0%
!! ATTGCATCTGGTGCTGCAGC+AGG - chr2_3:59559443-59559462 Msa0302730:intron 55.0%
GACGCCAAGTCCACGAAGAA+AGG - chr2_3:59559524-59559543 Msa0302730:intron 55.0%
GCCAAGTCCACGAAGAAAGG+TGG - chr2_3:59559527-59559546 Msa0302730:intron 55.0%
CCTCTCTCCACCTTTCTTCG+TGG + chr2_3:59559537-59559556 None:intergenic 55.0%
CCACGAAGAAAGGTGGAGAG+AGG - chr2_3:59559534-59559553 Msa0302730:intron 55.0%
TTCGACGGTAGAGTGGCTTG+AGG + chr2_3:59560354-59560373 None:intergenic 55.0%
TGGACTTGGCGTCGCTTGCA+AGG + chr2_3:59559517-59559536 None:intergenic 60.0%
CTTCGAGCAGTTGCTGGTGC+TGG - chr2_3:59560699-59560718 Msa0302730:intron 60.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 59556624 59560971 59556624 ID=Msa0302730;Name=Msa0302730
chr2_3 mRNA 59556624 59560971 59556624 ID=Msa0302730-mRNA-1;Parent=Msa0302730;Name=Msa0302730-mRNA-1;_AED=0.04;_eAED=0.04;_QI=136|1|1|1|0.66|0.5|4|180|362
chr2_3 exon 59556624 59557100 59556624 ID=Msa0302730-mRNA-1:exon:19373;Parent=Msa0302730-mRNA-1
chr2_3 exon 59557871 59558242 59557871 ID=Msa0302730-mRNA-1:exon:19372;Parent=Msa0302730-mRNA-1
chr2_3 exon 59558359 59558822 59558359 ID=Msa0302730-mRNA-1:exon:19371;Parent=Msa0302730-mRNA-1
chr2_3 exon 59560880 59560971 59560880 ID=Msa0302730-mRNA-1:exon:19370;Parent=Msa0302730-mRNA-1
chr2_3 five_prime_UTR 59560880 59560971 59560880 ID=Msa0302730-mRNA-1:five_prime_utr;Parent=Msa0302730-mRNA-1
chr2_3 five_prime_UTR 59558779 59558822 59558779 ID=Msa0302730-mRNA-1:five_prime_utr;Parent=Msa0302730-mRNA-1
chr2_3 CDS 59558359 59558778 59558359 ID=Msa0302730-mRNA-1:cds;Parent=Msa0302730-mRNA-1
chr2_3 CDS 59557871 59558242 59557871 ID=Msa0302730-mRNA-1:cds;Parent=Msa0302730-mRNA-1
chr2_3 CDS 59556804 59557100 59556804 ID=Msa0302730-mRNA-1:cds;Parent=Msa0302730-mRNA-1
chr2_3 three_prime_UTR 59556624 59556803 59556624 ID=Msa0302730-mRNA-1:three_prime_utr;Parent=Msa0302730-mRNA-1
Gene Sequence

>Msa0302730

ATGATGGCTGATAAGAGGCACCAATACCCAACAGTAGCACAAAAGTTTGGTCTAAGATCAAATCTTTCTCCACATATTGCAAATTCCTATGGAGGTTCAGAAAAACCTGTTCTGTTTCAGAAACAGTTTTCATCCTCAAATGCAGTGTTTGTTCCATCTCCATCAGAGAAAAACTTTGCAAGCTTTGCGACTGATTTTCTCATGGGTGGAGTTTCTGCAGCAGTGTCAAAATCTGCAGCAGCTCCTATTGAGCGCGTGAAGCTTCTGATTCAAAATCAAGATGAGATGATTAAGGCTGGTAGGCTCTCTGAGCCTTACAAGGGTATTGGAGATTGTTTTGGAAGAACAGTTAAAGATGAAGGATTTACTTCGCTTTGGAGAGGAAACACCGTCAATGTTATCCGTTACTTTCCAACACAGGCATTCAACTTTGCATTCAAAGACTACTTTAAGAAGCTATTTAACTTCAAGCAAGAGAGAGATGGATATTGGAAAGTCTTTGCAGGAAATATTGCATCTGGTGCTGCAGCAGGAGCTTCATCTTCCGTCTTTGTTTACTCGTTGGATTATGCTCGAACTCGCCTTGCAAGCGACGCCAAGTCCACGAAGAAAGGTGGAGAGAGGCAATTCAATGGCTTGATTGATGTCTACAAGAAGACATTGCAATCAGATGGTATTGCTGGTCTTTATCGCGGCTTCAATGTTTCAGTTGTTGGAATCATTGTGTACCGTGGTTTGTATTTTGGACTGTATGATTCTCTTAAGCCAGTGCTCTTGGTAGGAACGTTTCAGGATAGTTTCCTAGCTAGCTTTGCCCTAGGATGGGCTGTTACAGTTGGTGCTAGTGTAGCATCTTATCCTTTAGACACTGTTCGTAGAAGAATGATGATGACATCAGGTGAAGCTGTAAAGTACAAGAGTTCTTTGGATGCTTTCTCACAAATTGTGAAAACTGAAGGTCCAAAATCTCTCTTCAAAGGTGCTGGTGCAAACATTCTTCGAGCAGTTGCTGGTGCTGGTGTGCTTGCAAGCTATGATAAACTTCAGGTGCTTATGTTGGGAAAGAAATATGGTTCTGGTGGAGCTTAA

Protein sequence

>Msa0302730

MMADKRHQYPTVAQKFGLRSNLSPHIANSYGGSEKPVLFQKQFSSSNAVFVPSPSEKNFASFATDFLMGGVSAAVSKSAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFGRTVKDEGFTSLWRGNTVNVIRYFPTQAFNFAFKDYFKKLFNFKQERDGYWKVFAGNIASGAAAGASSSVFVYSLDYARTRLASDAKSTKKGGERQFNGLIDVYKKTLQSDGIAGLYRGFNVSVVGIIVYRGLYFGLYDSLKPVLLVGTFQDSFLASFALGWAVTVGASVASYPLDTVRRRMMMTSGEAVKYKSSLDAFSQIVKTEGPKSLFKGAGANILRAVAGAGVLASYDKLQVLMLGKKYGSGGA*