AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0960640

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 118 sgRNAs with CRISPR-Local

Find 275 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATAACGCTGATTTGGATTT+TGG 0.108899 6_3:-80292225 None:intergenic
AAAATCCAAATCAGCGTTAT+TGG 0.217947 6_3:+80292227 Msa0960640:five_prime_UTR
ATTGCAGTTGGAACAGAAAT+TGG 0.228659 6_3:+80295383 Msa0960640:five_prime_UTR
GGCTGTTATGGTGGCTGTTA+TGG 0.241323 6_3:+80295506 Msa0960640:CDS
CTTTCTCCCACATAATTTCT+TGG 0.244934 6_3:-80292142 None:intergenic
TATCCAATCCATCTGGAATT+TGG 0.265507 6_3:+80293836 Msa0960640:five_prime_UTR
TTTCGAAATTATTGATATAT+AGG 0.276304 6_3:+80295727 Msa0960640:CDS
CTACACCAATAACGCTGATT+TGG 0.306931 6_3:-80292232 None:intergenic
AATGCCAGTTTCCTAGTTGC+TGG 0.309337 6_3:-80294298 None:intergenic
AATCAGGTCTGATGAAAGTT+TGG 0.310085 6_3:+80291418 Msa0960640:five_prime_UTR
TATCCTTCATGCAGAGATTC+AGG 0.318153 6_3:+80295666 Msa0960640:CDS
ATTAATCTTTCCTGACTAAA+GGG 0.328847 6_3:-80291471 None:intergenic
TTCGAAATTATTGATATATA+GGG 0.335242 6_3:+80295728 Msa0960640:CDS
ATGAGTTAAATGCTTTGTTT+TGG 0.335368 6_3:+80291209 Msa0960640:five_prime_UTR
AATTTCGAAAGCCAGCTTTC+CGG 0.356963 6_3:-80295714 None:intergenic
GAATTTGCCAACGAGTCTTC+TGG 0.359716 6_3:+80295541 Msa0960640:CDS
CAAAGTCCTAGGGGCTGTTA+TGG 0.370378 6_3:+80295494 Msa0960640:CDS
TAAAATAACAAGGCTGCCTT+TGG 0.371054 6_3:+80294320 Msa0960640:five_prime_UTR
CATAGACCAAGGGCCTTAAC+TGG 0.383301 6_3:+80294438 Msa0960640:five_prime_UTR
AATATATTTCTACATTTGTC+AGG 0.384999 6_3:+80291580 Msa0960640:five_prime_UTR
GAGATTCAGGCTCTCCTTGT+TGG 0.385765 6_3:+80295679 Msa0960640:CDS
CATTAATCTTTCCTGACTAA+AGG 0.392144 6_3:-80291472 None:intergenic
ATACGTTCTGAAGGATTATC+AGG 0.392504 6_3:-80294265 None:intergenic
TGCCAACGAGTCTTCTGGTC+TGG 0.392757 6_3:+80295546 Msa0960640:CDS
TGGATTGGATATTGAAGTTA+AGG 0.396872 6_3:-80293824 None:intergenic
CTGTTGATGAATGCATGATT+TGG 0.401275 6_3:+80295408 Msa0960640:five_prime_UTR
TGGAACCTGTACAAATTTGC+AGG 0.412613 6_3:+80295566 Msa0960640:CDS
CATATCTCCAAGAAATTATG+TGG 0.415613 6_3:+80292135 Msa0960640:five_prime_UTR
AAAATTCAATTTGATAGCTA+TGG 0.420175 6_3:-80291353 None:intergenic
CCTCCCAGCAACTAGGAAAC+TGG 0.424502 6_3:+80294294 Msa0960640:five_prime_UTR
CTCAAGTTGTGCCGGAAAGC+TGG 0.425462 6_3:+80295703 Msa0960640:CDS
CTGCCTTTGGCACTGGTGAC+CGG 0.425884 6_3:+80294333 Msa0960640:five_prime_UTR
ATGCTTGTTACTTTCAGAAA+AGG 0.426006 6_3:+80291325 Msa0960640:five_prime_UTR
GTACCGCTCTGGTGTTGATA+TGG 0.434473 6_3:+80292263 Msa0960640:five_prime_UTR
ATCAGGTCTGATGAAAGTTT+GGG 0.449772 6_3:+80291419 Msa0960640:five_prime_UTR
CTACCAAATTCCAGATGGAT+TGG 0.456320 6_3:-80293839 None:intergenic
AAATCCGTGGGTTGCTTGAA+AGG 0.458090 6_3:+80291660 Msa0960640:five_prime_UTR
ATGAAAGCTCCTTTCAAGTA+AGG 0.459351 6_3:-80292115 None:intergenic
GGGTTGCTTGAAAGGGAATC+AGG 0.459968 6_3:+80291668 Msa0960640:five_prime_UTR
CAGAGGCATCAGAAGCAATC+AGG 0.461283 6_3:+80291402 Msa0960640:five_prime_UTR
TGAAGAATCACAACAGCAGC+GGG 0.463247 6_3:+80295356 Msa0960640:five_prime_UTR
ATGCCAGTTTCCTAGTTGCT+GGG 0.463969 6_3:-80294297 None:intergenic
TCAGCTATACCCCTTTAGTC+AGG 0.466158 6_3:+80291461 Msa0960640:five_prime_UTR
TTCTGAAAGAACACCCTCAT+AGG 0.467334 6_3:-80293865 None:intergenic
ACTTCAATATCCAATCCATC+TGG 0.473936 6_3:+80293829 Msa0960640:five_prime_UTR
TCGAAGTTGGGGCATGTCAC+CGG 0.474295 6_3:-80294352 None:intergenic
GGAGGGTCCAATGGGAAACT+TGG 0.474787 6_3:+80293909 Msa0960640:five_prime_UTR
AAAAGAAAGGCCACTACAAA+TGG 0.476221 6_3:-80291606 None:intergenic
TAGCTGAAGGCGGCGAGAGA+TGG 0.477974 6_3:-80291445 None:intergenic
GAATACCTGCAAATTTGTAC+AGG 0.487818 6_3:-80295571 None:intergenic
AAAAGCGAAAGCAAAGTCCT+AGG 0.488446 6_3:+80295483 Msa0960640:CDS
AACAAGGCTGCCTTTGGCAC+TGG 0.490501 6_3:+80294326 Msa0960640:five_prime_UTR
GTCAGCTCCAAGTTTCCCAT+TGG 0.492024 6_3:-80293916 None:intergenic
TGAAAGTGGCAGCAGGGCAG+AGG 0.493756 6_3:-80295450 None:intergenic
GTGTAACTAATCGCCAGTTA+AGG 0.495318 6_3:-80294451 None:intergenic
AAAGCGAAAGCAAAGTCCTA+GGG 0.496453 6_3:+80295484 Msa0960640:CDS
CATTCGCTCGCAAGCAACTC+AGG 0.505381 6_3:+80294499 Msa0960640:five_prime_UTR
TAATCCTTCAGAACGTATGA+TGG 0.508152 6_3:+80294270 Msa0960640:five_prime_UTR
TAATCGCCAGTTAAGGCCCT+TGG 0.516926 6_3:-80294444 None:intergenic
GATAGCATGAAAGTGGCAGC+AGG 0.517547 6_3:-80295457 None:intergenic
AATCCGTGGGTTGCTTGAAA+GGG 0.518028 6_3:+80291661 Msa0960640:five_prime_UTR
GTCGGAGCAGTTTCACAGAT+GGG 0.519903 6_3:+80294392 Msa0960640:five_prime_UTR
TTGTTGGTCTCAAGTTGTGC+CGG 0.520719 6_3:+80295695 Msa0960640:CDS
TGTTATGGTGGCTGTTATGG+AGG 0.522613 6_3:+80295509 Msa0960640:CDS
TTGATGCGTGGAGGGTCCAA+TGG 0.523788 6_3:+80293900 Msa0960640:five_prime_UTR
TAGTACTCATTGTACCGCTC+TGG 0.525180 6_3:+80292252 Msa0960640:five_prime_UTR
AAAGTCACGACTCTTGCAAA+AGG 0.526722 6_3:-80292196 None:intergenic
AGTCCTAGGGGCTGTTATGG+TGG 0.534530 6_3:+80295497 Msa0960640:CDS
TGATGGGCCTCCCAGCAACT+AGG 0.539594 6_3:+80294287 Msa0960640:five_prime_UTR
TGATGCGTGGAGGGTCCAAT+GGG 0.540983 6_3:+80293901 Msa0960640:five_prime_UTR
GAATTTGGTAGAGTCCTATG+AGG 0.546732 6_3:+80293851 Msa0960640:five_prime_UTR
CGTGTGTGCTTATAAGCTAG+TGG 0.553895 6_3:-80291177 None:intergenic
GCTGTTATGGAGGTTGTGAT+AGG 0.560236 6_3:+80295519 Msa0960640:CDS
AAACTCTGTCCTTACTTGAA+AGG 0.562382 6_3:+80292106 Msa0960640:five_prime_UTR
TGTTCTTTCAGAATGTAAGC+TGG 0.570906 6_3:+80293875 Msa0960640:five_prime_UTR
GTGAAGAATCACAACAGCAG+CGG 0.572175 6_3:+80295355 Msa0960640:five_prime_UTR
CAAAAGGATCTCATAAATGT+CGG 0.572977 6_3:-80292180 None:intergenic
GGTCGGAGCAGTTTCACAGA+TGG 0.574961 6_3:+80294391 Msa0960640:five_prime_UTR
TGTCAGGAAACCATTTGTAG+TGG 0.577638 6_3:+80291596 Msa0960640:five_prime_UTR
GACTAAAGGGGTATAGCTGA+AGG 0.578814 6_3:-80291458 None:intergenic
TCACCGGTCACCAGTGCCAA+AGG 0.584565 6_3:-80294336 None:intergenic
CTAGGTTGATGATGACCACT+AGG 0.586705 6_3:+80294237 Msa0960640:intron
ACAAGTTGATAAATTGTCGC+AGG 0.588497 6_3:+80293937 Msa0960640:five_prime_UTR
TACCAGGTCGAAACAAGTGA+TGG 0.589598 6_3:+80292071 Msa0960640:intron
ATTCCCTTTCAAGCAACCCA+CGG 0.589898 6_3:-80291664 None:intergenic
GTCTATGTTCAATACTAGAG+AGG 0.590791 6_3:-80294422 None:intergenic
GAGCCTGAATCTCTGCATGA+AGG 0.593178 6_3:-80295669 None:intergenic
AGCTGGTATTGATGCGTGGA+GGG 0.596601 6_3:+80293892 Msa0960640:five_prime_UTR
AATCCTTCAGAACGTATGAT+GGG 0.598331 6_3:+80294271 Msa0960640:five_prime_UTR
TCTATGTTCAATACTAGAGA+GGG 0.601384 6_3:-80294421 None:intergenic
AGGCCCATCATACGTTCTGA+AGG 0.602112 6_3:-80294274 None:intergenic
TTAATCTTTCCTGACTAAAG+GGG 0.603823 6_3:-80291470 None:intergenic
TTCCAGACCAGAAGACTCGT+TGG 0.603831 6_3:-80295548 None:intergenic
GGACTCTACCAAATTCCAGA+TGG 0.605302 6_3:-80293844 None:intergenic
ATTACATAAGGATGATTCAG+AGG 0.611044 6_3:+80291385 Msa0960640:five_prime_UTR
GGTTCACGCCACAAAATCCG+TGG 0.616053 6_3:+80291647 Msa0960640:five_prime_UTR
TCGGAGCAGTTTCACAGATG+GGG 0.619011 6_3:+80294393 Msa0960640:five_prime_UTR
AAGAATCACAACAGCAGCGG+GGG 0.621093 6_3:+80295358 Msa0960640:five_prime_UTR
ATAGCATGAAAGTGGCAGCA+GGG 0.631935 6_3:-80295456 None:intergenic
CAGCCACCATAACAGCCCCT+AGG 0.632430 6_3:-80295500 None:intergenic
ACCAGGTCGAAACAAGTGAT+GGG 0.632941 6_3:+80292072 Msa0960640:intron
CCAGTTTCCTAGTTGCTGGG+AGG 0.641595 6_3:-80294294 None:intergenic
CTAGTATTGAACATAGACCA+AGG 0.647948 6_3:+80294427 Msa0960640:five_prime_UTR
TAGTATTGAACATAGACCAA+GGG 0.648405 6_3:+80294428 Msa0960640:five_prime_UTR
ATATCTCCAAGAAATTATGT+GGG 0.658142 6_3:+80292136 Msa0960640:five_prime_UTR
CTAGCTTATAAGCACACACG+AGG 0.666404 6_3:+80291180 Msa0960640:five_prime_UTR
GTTCACGCCACAAAATCCGT+GGG 0.670502 6_3:+80291648 Msa0960640:five_prime_UTR
AAACTGGCATTAAAATAACA+AGG 0.676868 6_3:+80294310 Msa0960640:five_prime_UTR
AATTTGGTAGAGTCCTATGA+GGG 0.679134 6_3:+80293852 Msa0960640:five_prime_UTR
AAGCGAAAGCAAAGTCCTAG+GGG 0.683592 6_3:+80295485 Msa0960640:CDS
CTATGTTCAATACTAGAGAG+GGG 0.698227 6_3:-80294420 None:intergenic
TGTAAGCTGGTATTGATGCG+TGG 0.698984 6_3:+80293888 Msa0960640:five_prime_UTR
AAGCTGGTATTGATGCGTGG+AGG 0.704333 6_3:+80293891 Msa0960640:five_prime_UTR
GATTATCAGGAACAACCTAG+TGG 0.710350 6_3:-80294252 None:intergenic
GGCACAACTTGAGACCAACA+AGG 0.718127 6_3:-80295693 None:intergenic
TAAAGGGGTATAGCTGAAGG+CGG 0.719105 6_3:-80291455 None:intergenic
GAAGAATCACAACAGCAGCG+GGG 0.727532 6_3:+80295357 Msa0960640:five_prime_UTR
TCACCATATCAACACCAGAG+CGG 0.772160 6_3:-80292266 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTACAATTATTGATATAT+AGG + chr6_3:80295634-80295653 Msa0960640:intron 10.0%
!!! TTTTATTTAGCTATTACATA+AGG + chr6_3:80291373-80291392 Msa0960640:five_prime_UTR 15.0%
!! AATGTAGAAATATATTACTT+TGG - chr6_3:80291576-80291595 None:intergenic 15.0%
!! TAATAATACAACTTATAGAA+GGG - chr6_3:80292738-80292757 None:intergenic 15.0%
!! ATAATAATACAACTTATAGA+AGG - chr6_3:80292739-80292758 None:intergenic 15.0%
!!! TTGTATTATTATTTTGTTTC+TGG + chr6_3:80292747-80292766 Msa0960640:intron 15.0%
!! AGAACTTAATTTCAATTAAA+TGG + chr6_3:80294526-80294545 Msa0960640:intron 15.0%
!! GAACTTAATTTCAATTAAAT+GGG + chr6_3:80294527-80294546 Msa0960640:intron 15.0%
!!! AAAATTCAATTTGATAGCTA+TGG - chr6_3:80291356-80291375 None:intergenic 20.0%
!!! AATATATTTCTACATTTGTC+AGG + chr6_3:80291580-80291599 Msa0960640:five_prime_UTR 20.0%
!! TTGATTTATTTACGTAAATG+TGG + chr6_3:80292047-80292066 Msa0960640:intron 20.0%
!!! ATTTACATGTACTTCTAAAA+TGG - chr6_3:80292400-80292419 None:intergenic 20.0%
!!! TTAGAAGTACATGTAAATTA+TGG + chr6_3:80292402-80292421 Msa0960640:intron 20.0%
!!! TTGAAATTTGAAACTACTAA+TGG - chr6_3:80292941-80292960 None:intergenic 20.0%
!! ATTACTAATTACTGATACAA+AGG - chr6_3:80293351-80293370 None:intergenic 20.0%
!!! TCAGTAATTAGTAATCTTTT+TGG + chr6_3:80293356-80293375 Msa0960640:intron 20.0%
!!! TAATTAGTAATCTTTTTGGT+GGG + chr6_3:80293360-80293379 Msa0960640:intron 20.0%
!! ATTACTAATTACTGATACAA+AGG - chr6_3:80293351-80293370 None:intergenic 20.0%
!!! TCAGTAATTAGTAATCTTTT+TGG + chr6_3:80293356-80293375 Msa0960640:intron 20.0%
!!! TAATTAGTAATCTTTTTGGT+GGG + chr6_3:80293360-80293379 Msa0960640:intron 20.0%
!! ATTACTAATTACTGATACAA+AGG - chr6_3:80293351-80293370 None:intergenic 20.0%
!! TTTGTATCAGTAATTAGTAA+TGG + chr6_3:80293350-80293369 Msa0960640:intron 20.0%
!! ATTAAAGTTAATTCATAGGA+AGG - chr6_3:80293665-80293684 None:intergenic 20.0%
!! GGTTATTAAAGTTAATTCAT+AGG - chr6_3:80293669-80293688 None:intergenic 20.0%
!! ACTAAAACACATATAACTTT+AGG - chr6_3:80293690-80293709 None:intergenic 20.0%
!!! GTAGTTTTTATAATCTATTC+TGG + chr6_3:80293741-80293760 Msa0960640:intron 20.0%
!! TAAAAAATGTACACAACATT+TGG + chr6_3:80294211-80294230 Msa0960640:intron 20.0%
!!! TTTTAAGTGATTTGAAAACA+AGG + chr6_3:80294898-80294917 Msa0960640:intron 20.0%
!!! TTTATGTATTGACTTGTAAA+GGG - chr6_3:80295272-80295291 None:intergenic 20.0%
!!! TTTTATGTATTGACTTGTAA+AGG - chr6_3:80295273-80295292 None:intergenic 20.0%
!! ACAATTATTGATATATAGGT+TGG + chr6_3:80295638-80295657 Msa0960640:intron 20.0%
!!! ATGAGTTAAATGCTTTGTTT+TGG + chr6_3:80291209-80291228 Msa0960640:five_prime_UTR 25.0%
! ATTAATCTTTCCTGACTAAA+GGG - chr6_3:80291474-80291493 None:intergenic 25.0%
! ATATCTCCAAGAAATTATGT+GGG + chr6_3:80292136-80292155 Msa0960640:five_prime_UTR 25.0%
! GTACTGAAAATGAAAATATC+AGG + chr6_3:80292468-80292487 Msa0960640:intron 25.0%
!!! AACTTTTGTTGTTCAATGAT+TGG + chr6_3:80292506-80292525 Msa0960640:intron 25.0%
! AAATATACGCTATGAATTAG+GGG - chr6_3:80292580-80292599 None:intergenic 25.0%
! GAAATATACGCTATGAATTA+GGG - chr6_3:80292581-80292600 None:intergenic 25.0%
! AGAAATATACGCTATGAATT+AGG - chr6_3:80292582-80292601 None:intergenic 25.0%
!!! ACTTTTTCATTTGAATTGGA+CGG - chr6_3:80292775-80292794 None:intergenic 25.0%
!!! GACTACTTTTTCATTTGAAT+TGG - chr6_3:80292779-80292798 None:intergenic 25.0%
! ATTCAAATGAAAAAGTAGTC+TGG + chr6_3:80292779-80292798 Msa0960640:intron 25.0%
!!! AGTTATTTCTGTTATTCACT+CGG + chr6_3:80292913-80292932 Msa0960640:intron 25.0%
! TCTATTCTGTATAATGCATA+TGG - chr6_3:80292986-80293005 None:intergenic 25.0%
! CAGTTAAGCTTAGTAAAAAT+TGG - chr6_3:80293078-80293097 None:intergenic 25.0%
!!! TGATTTTGAAGTTTTAGATG+TGG + chr6_3:80293260-80293279 Msa0960640:intron 25.0%
!! GTGGATTTTATCTTGAATTT+TGG + chr6_3:80293279-80293298 Msa0960640:intron 25.0%
!! GTAATTAGTAATCTTTTTGG+TGG + chr6_3:80293359-80293378 Msa0960640:intron 25.0%
!! GTAATTAGTAATCTTTTTGG+TGG + chr6_3:80293359-80293378 Msa0960640:intron 25.0%
! TGATCTAGCGAAAAAAATTA+AGG - chr6_3:80293802-80293821 None:intergenic 25.0%
!!! TTAATTTTTTTCGCTAGATC+AGG + chr6_3:80293801-80293820 Msa0960640:intron 25.0%
!!! GTGTACATTTTTTAAGCATT+GGG - chr6_3:80294205-80294224 None:intergenic 25.0%
!!! TGTGTACATTTTTTAAGCAT+TGG - chr6_3:80294206-80294225 None:intergenic 25.0%
! AAACTGGCATTAAAATAACA+AGG + chr6_3:80294310-80294329 Msa0960640:five_prime_UTR 25.0%
!!! TGCAATTGAATTTTGATGAA+TGG - chr6_3:80294563-80294582 None:intergenic 25.0%
! TGATTTGAAAACAAGGAATA+AGG + chr6_3:80294905-80294924 Msa0960640:intron 25.0%
!!! TTCAGTTTTAGACTTTTAGT+TGG + chr6_3:80294964-80294983 Msa0960640:intron 25.0%
!!! TTTTAGACTTTTAGTTGGTA+GGG + chr6_3:80294969-80294988 Msa0960640:intron 25.0%
! AAAAGAGACTAGAAACAATT+TGG - chr6_3:80295125-80295144 None:intergenic 25.0%
! AAATACAATATGCATTCTTG+AGG - chr6_3:80295299-80295318 None:intergenic 25.0%
! AAGAATGCATATTGTATTTG+AGG + chr6_3:80295300-80295319 Msa0960640:intron 25.0%
!! TCTATTGATAGCTGAATAAT+GGG + chr6_3:80295325-80295344 Msa0960640:intron 25.0%
!! ATGCTTGTTACTTTCAGAAA+AGG + chr6_3:80291325-80291344 Msa0960640:five_prime_UTR 30.0%
ATTACATAAGGATGATTCAG+AGG + chr6_3:80291385-80291404 Msa0960640:five_prime_UTR 30.0%
TTAATCTTTCCTGACTAAAG+GGG - chr6_3:80291473-80291492 None:intergenic 30.0%
CATTAATCTTTCCTGACTAA+AGG - chr6_3:80291475-80291494 None:intergenic 30.0%
GTATGACAATGCAAAAAGAA+AGG - chr6_3:80291622-80291641 None:intergenic 30.0%
TACTTTGATATTGCCACATT+GGG + chr6_3:80291717-80291736 Msa0960640:intron 30.0%
!! TTGCCACATTTTTGAAAAGA+GGG - chr6_3:80291841-80291860 None:intergenic 30.0%
!! TTTGCCACATTTTTGAAAAG+AGG - chr6_3:80291842-80291861 None:intergenic 30.0%
GACATAGATATATCTTTCCA+TGG + chr6_3:80291884-80291903 Msa0960640:intron 30.0%
CATATCTCCAAGAAATTATG+TGG + chr6_3:80292135-80292154 Msa0960640:five_prime_UTR 30.0%
CAAAAGGATCTCATAAATGT+CGG - chr6_3:80292183-80292202 None:intergenic 30.0%
!!! AATAACGCTGATTTGGATTT+TGG - chr6_3:80292228-80292247 None:intergenic 30.0%
AAAATCCAAATCAGCGTTAT+TGG + chr6_3:80292227-80292246 Msa0960640:five_prime_UTR 30.0%
!!! AGACCGGATGTAATTTTTTA+TGG + chr6_3:80292288-80292307 Msa0960640:intron 30.0%
CCTCCATAAAAAATTACATC+CGG - chr6_3:80292294-80292313 None:intergenic 30.0%
GAAGTACATGTAAATTATGG+AGG + chr6_3:80292405-80292424 Msa0960640:intron 30.0%
ACATTCAAATACATTATCCG+AGG - chr6_3:80292435-80292454 None:intergenic 30.0%
ATTAGGGGATAAGTTGTATA+AGG - chr6_3:80292565-80292584 None:intergenic 30.0%
!! ACCAATATTTGTTTTCCAAC+AGG + chr6_3:80292639-80292658 Msa0960640:intron 30.0%
TCCTGTTGGAAAACAAATAT+TGG - chr6_3:80292643-80292662 None:intergenic 30.0%
AGATCTTGAATACTTGTAAG+AGG + chr6_3:80293211-80293230 Msa0960640:intron 30.0%
AAGTTCAAAAAACACATAGC+AGG - chr6_3:80293628-80293647 None:intergenic 30.0%
! TGGATTGGATATTGAAGTTA+AGG - chr6_3:80293827-80293846 None:intergenic 30.0%
!!! TTTTTAAGCATTGGGAACAT+TGG - chr6_3:80294197-80294216 None:intergenic 30.0%
TCTATGTTCAATACTAGAGA+GGG - chr6_3:80294424-80294443 None:intergenic 30.0%
! TAGTATTGAACATAGACCAA+GGG + chr6_3:80294428-80294447 Msa0960640:five_prime_UTR 30.0%
!! TGAATTTTGATGAATGGACA+TGG - chr6_3:80294557-80294576 None:intergenic 30.0%
AAAGTAGTTCACTTGGAAAT+GGG - chr6_3:80294749-80294768 None:intergenic 30.0%
TAAAGTAGTTCACTTGGAAA+TGG - chr6_3:80294750-80294769 None:intergenic 30.0%
! CAATCACTGCTAAATTTTAG+CGG + chr6_3:80294787-80294806 Msa0960640:intron 30.0%
ATGATCAACCAAATTCTGTT+TGG + chr6_3:80294837-80294856 Msa0960640:intron 30.0%
! AATATGCATCTAAGTGCTTT+TGG + chr6_3:80294941-80294960 Msa0960640:intron 30.0%
!! GTTTTAGACTTTTAGTTGGT+AGG + chr6_3:80294968-80294987 Msa0960640:intron 30.0%
!! CTTTTAAAGAAGCATATCCT+TGG + chr6_3:80294998-80295017 Msa0960640:intron 30.0%
! TATGCAAGTGTTATGTTTTG+TGG + chr6_3:80295068-80295087 Msa0960640:intron 30.0%
! ATGCAAGTGTTATGTTTTGT+GGG + chr6_3:80295069-80295088 Msa0960640:intron 30.0%
GAGTTATAGACTAATTGCAA+CGG + chr6_3:80295195-80295214 Msa0960640:intron 30.0%
! GTCTATTGATAGCTGAATAA+TGG + chr6_3:80295324-80295343 Msa0960640:intron 30.0%
! TTTTAGTGATAGCATGAAAG+TGG - chr6_3:80295467-80295486 None:intergenic 30.0%
AAATTTGCAGGTATTCACAA+AGG + chr6_3:80295578-80295597 Msa0960640:intron 30.0%
AATCAGGTCTGATGAAAGTT+TGG + chr6_3:80291418-80291437 Msa0960640:five_prime_UTR 35.0%
ATCAGGTCTGATGAAAGTTT+GGG + chr6_3:80291419-80291438 Msa0960640:five_prime_UTR 35.0%
AAAAGAAAGGCCACTACAAA+TGG - chr6_3:80291609-80291628 None:intergenic 35.0%
! TCTTTTTGCATTGTCATACG+AGG + chr6_3:80291623-80291642 Msa0960640:five_prime_UTR 35.0%
GTACTTTGATATTGCCACAT+TGG + chr6_3:80291716-80291735 Msa0960640:intron 35.0%
TGTTCAATTCATACCCAATG+TGG - chr6_3:80291733-80291752 None:intergenic 35.0%
! TGAAAAGAGGGAACATTTTG+TGG - chr6_3:80291829-80291848 None:intergenic 35.0%
! GTTCCCTCTTTTCAAAAATG+TGG + chr6_3:80291835-80291854 Msa0960640:intron 35.0%
CCATTATAGCTTAGAAACCA+TGG - chr6_3:80291904-80291923 None:intergenic 35.0%
CCATGGTTTCTAAGCTATAA+TGG + chr6_3:80291901-80291920 Msa0960640:intron 35.0%
TTTACGTAAATGTGGATACC+AGG + chr6_3:80292055-80292074 Msa0960640:intron 35.0%
AAACTCTGTCCTTACTTGAA+AGG + chr6_3:80292106-80292125 Msa0960640:five_prime_UTR 35.0%
! ATGAAAGCTCCTTTCAAGTA+AGG - chr6_3:80292118-80292137 None:intergenic 35.0%
CTTTCTCCCACATAATTTCT+TGG - chr6_3:80292145-80292164 None:intergenic 35.0%
!!! CCGGATGTAATTTTTTATGG+AGG + chr6_3:80292291-80292310 Msa0960640:intron 35.0%
TTTCATTCCTGTACGTTTAG+AGG + chr6_3:80292349-80292368 Msa0960640:intron 35.0%
TCAAATACATTATCCGAGGT+TGG - chr6_3:80292431-80292450 None:intergenic 35.0%
ATACTGACAGAAACTACATG+AGG + chr6_3:80292608-80292627 Msa0960640:intron 35.0%
! TTGTTTTCCAACAGGAACAT+AGG + chr6_3:80292647-80292666 Msa0960640:intron 35.0%
!! ATTTGGTGCTTTAACCAATC+AGG - chr6_3:80292678-80292697 None:intergenic 35.0%
! TTGGTTAAAGCACCAAATCA+CGG + chr6_3:80292680-80292699 Msa0960640:intron 35.0%
AGTGCAGTAACAGTAAACTA+TGG + chr6_3:80292836-80292855 Msa0960640:intron 35.0%
TCTGTATAATGCATATGGTC+TGG - chr6_3:80292981-80293000 None:intergenic 35.0%
TTGTATGCAAGTGTTTCCTA+TGG + chr6_3:80293027-80293046 Msa0960640:intron 35.0%
! TGGTGCAGTAGAGAAATTTT+TGG + chr6_3:80293514-80293533 Msa0960640:intron 35.0%
TTCAAAAAACACATAGCAGG+TGG - chr6_3:80293625-80293644 None:intergenic 35.0%
ACTTCAATATCCAATCCATC+TGG + chr6_3:80293829-80293848 Msa0960640:five_prime_UTR 35.0%
! TATCCAATCCATCTGGAATT+TGG + chr6_3:80293836-80293855 Msa0960640:five_prime_UTR 35.0%
AATTTGGTAGAGTCCTATGA+GGG + chr6_3:80293852-80293871 Msa0960640:five_prime_UTR 35.0%
TGTTCTTTCAGAATGTAAGC+TGG + chr6_3:80293875-80293894 Msa0960640:five_prime_UTR 35.0%
!! ACAAGTTGATAAATTGTCGC+AGG + chr6_3:80293937-80293956 Msa0960640:five_prime_UTR 35.0%
CGTGATTGACATCATATTGT+AGG + chr6_3:80294033-80294052 Msa0960640:intron 35.0%
TTTCTTAACCTAATCCTGTG+TGG + chr6_3:80294130-80294149 Msa0960640:intron 35.0%
!! ATACGTTCTGAAGGATTATC+AGG - chr6_3:80294268-80294287 None:intergenic 35.0%
TAATCCTTCAGAACGTATGA+TGG + chr6_3:80294270-80294289 Msa0960640:five_prime_UTR 35.0%
AATCCTTCAGAACGTATGAT+GGG + chr6_3:80294271-80294290 Msa0960640:five_prime_UTR 35.0%
TAAAATAACAAGGCTGCCTT+TGG + chr6_3:80294320-80294339 Msa0960640:five_prime_UTR 35.0%
! AAAATTTTGCGTCGAAGTTG+GGG - chr6_3:80294366-80294385 None:intergenic 35.0%
! CAAAATTTTGCGTCGAAGTT+GGG - chr6_3:80294367-80294386 None:intergenic 35.0%
! TTCGACGCAAAATTTTGCAT+TGG + chr6_3:80294370-80294389 Msa0960640:five_prime_UTR 35.0%
!! ACGCAAAATTTTGCATTGGT+CGG + chr6_3:80294374-80294393 Msa0960640:five_prime_UTR 35.0%
CTATGTTCAATACTAGAGAG+GGG - chr6_3:80294423-80294442 None:intergenic 35.0%
GTCTATGTTCAATACTAGAG+AGG - chr6_3:80294425-80294444 None:intergenic 35.0%
! CTAGTATTGAACATAGACCA+AGG + chr6_3:80294427-80294446 Msa0960640:five_prime_UTR 35.0%
GAACGACAGAAAAAACTAGA+TGG - chr6_3:80294632-80294651 None:intergenic 35.0%
AAAGAAGACAAACTATGCAG+TGG + chr6_3:80294669-80294688 Msa0960640:intron 35.0%
AGCATGTAAAGTAGTTCACT+TGG - chr6_3:80294756-80294775 None:intergenic 35.0%
ATCAACCAAATTCTGTTTGG+AGG + chr6_3:80294840-80294859 Msa0960640:intron 35.0%
ATTCACCTCCAAACAGAATT+TGG - chr6_3:80294848-80294867 None:intergenic 35.0%
CATAACCAGGAAAATTGCTT+TGG - chr6_3:80295030-80295049 None:intergenic 35.0%
TTAAGACAGATTGCATAACC+AGG - chr6_3:80295043-80295062 None:intergenic 35.0%
! TCCTATTCCACACTTTTCAA+AGG + chr6_3:80295155-80295174 Msa0960640:intron 35.0%
! ACCTTTGAAAAGTGTGGAAT+AGG - chr6_3:80295159-80295178 None:intergenic 35.0%
! TCTAAGACCTTTGAAAAGTG+TGG - chr6_3:80295165-80295184 None:intergenic 35.0%
GCTAATTCATTAAGACCTCT+TGG - chr6_3:80295225-80295244 None:intergenic 35.0%
ATTGCAGTTGGAACAGAAAT+TGG + chr6_3:80295383-80295402 Msa0960640:five_prime_UTR 35.0%
! CTGTTGATGAATGCATGATT+TGG + chr6_3:80295408-80295427 Msa0960640:five_prime_UTR 35.0%
GAATACCTGCAAATTTGTAC+AGG - chr6_3:80295574-80295593 None:intergenic 35.0%
TGTCAGGAAACCATTTGTAG+TGG + chr6_3:80291596-80291615 Msa0960640:five_prime_UTR 40.0%
! TTTTGCATTGTCATACGAGG+TGG + chr6_3:80291626-80291645 Msa0960640:five_prime_UTR 40.0%
AAAGTCACGACTCTTGCAAA+AGG - chr6_3:80292199-80292218 None:intergenic 40.0%
! CTACACCAATAACGCTGATT+TGG - chr6_3:80292235-80292254 None:intergenic 40.0%
TAAATTATGGAGGCCAACCT+CGG + chr6_3:80292415-80292434 Msa0960640:intron 40.0%
GAACATAGGAGATTCCTGAT+TGG + chr6_3:80292661-80292680 Msa0960640:intron 40.0%
! TGGTTAAAGCACCAAATCAC+GGG + chr6_3:80292681-80292700 Msa0960640:intron 40.0%
TTGTTGTGTGTGTACAACTC+AGG - chr6_3:80293108-80293127 None:intergenic 40.0%
TGTGTAACGAGTAACTAAGC+AGG + chr6_3:80293152-80293171 Msa0960640:intron 40.0%
TGAGAAGAGACAGCGATTTA+AGG + chr6_3:80293549-80293568 Msa0960640:intron 40.0%
GAGAAGAGACAGCGATTTAA+GGG + chr6_3:80293550-80293569 Msa0960640:intron 40.0%
CTACCAAATTCCAGATGGAT+TGG - chr6_3:80293842-80293861 None:intergenic 40.0%
GAATTTGGTAGAGTCCTATG+AGG + chr6_3:80293851-80293870 Msa0960640:five_prime_UTR 40.0%
! TTCTGAAAGAACACCCTCAT+AGG - chr6_3:80293868-80293887 None:intergenic 40.0%
AAGTTCTACCACACAGGATT+AGG - chr6_3:80294141-80294160 None:intergenic 40.0%
AATGTCAAGTTCTACCACAC+AGG - chr6_3:80294147-80294166 None:intergenic 40.0%
GATTATCAGGAACAACCTAG+TGG - chr6_3:80294255-80294274 None:intergenic 40.0%
! GCAAAATTTTGCGTCGAAGT+TGG - chr6_3:80294368-80294387 None:intergenic 40.0%
GTGTAACTAATCGCCAGTTA+AGG - chr6_3:80294454-80294473 None:intergenic 40.0%
CATGTCAGAACTCGAAACTA+TGG - chr6_3:80294712-80294731 None:intergenic 40.0%
!! AATTGCTTTGGAGGTATCCA+AGG - chr6_3:80295018-80295037 None:intergenic 40.0%
! TACCTCCAAAGCAATTTTCC+TGG + chr6_3:80295022-80295041 Msa0960640:intron 40.0%
AACCAGGAAAATTGCTTTGG+AGG - chr6_3:80295027-80295046 None:intergenic 40.0%
AAAAGCGAAAGCAAAGTCCT+AGG + chr6_3:80295483-80295502 Msa0960640:CDS 40.0%
AAAGCGAAAGCAAAGTCCTA+GGG + chr6_3:80295484-80295503 Msa0960640:CDS 40.0%
TGGAACCTGTACAAATTTGC+AGG + chr6_3:80295566-80295585 Msa0960640:CDS 40.0%
TATCCTTCATGCAGAGATTC+AGG + chr6_3:80295666-80295685 Msa0960640:CDS 40.0%
AATTTCGAAAGCCAGCTTTC+CGG - chr6_3:80295717-80295736 None:intergenic 40.0%
CGTGTGTGCTTATAAGCTAG+TGG - chr6_3:80291180-80291199 None:intergenic 45.0%
CTAGCTTATAAGCACACACG+AGG + chr6_3:80291180-80291199 Msa0960640:five_prime_UTR 45.0%
! TAAAGGGGTATAGCTGAAGG+CGG - chr6_3:80291458-80291477 None:intergenic 45.0%
! GACTAAAGGGGTATAGCTGA+AGG - chr6_3:80291461-80291480 None:intergenic 45.0%
TCAGCTATACCCCTTTAGTC+AGG + chr6_3:80291461-80291480 Msa0960640:five_prime_UTR 45.0%
! AAATCCGTGGGTTGCTTGAA+AGG + chr6_3:80291660-80291679 Msa0960640:five_prime_UTR 45.0%
! AATCCGTGGGTTGCTTGAAA+GGG + chr6_3:80291661-80291680 Msa0960640:five_prime_UTR 45.0%
ATTCCCTTTCAAGCAACCCA+CGG - chr6_3:80291667-80291686 None:intergenic 45.0%
AAAATACGTCCAGCTGCAGA+AGG - chr6_3:80291767-80291786 None:intergenic 45.0%
TACCAGGTCGAAACAAGTGA+TGG + chr6_3:80292071-80292090 Msa0960640:intron 45.0%
ACCAGGTCGAAACAAGTGAT+GGG + chr6_3:80292072-80292091 Msa0960640:intron 45.0%
TAGTACTCATTGTACCGCTC+TGG + chr6_3:80292252-80292271 Msa0960640:five_prime_UTR 45.0%
TCACCATATCAACACCAGAG+CGG - chr6_3:80292269-80292288 None:intergenic 45.0%
!! TGGTGTTGATATGGTGAGAC+CGG + chr6_3:80292272-80292291 Msa0960640:intron 45.0%
ATGCATGCCTCTAAACGTAC+AGG - chr6_3:80292359-80292378 None:intergenic 45.0%
GGAATCTCCTATGTTCCTGT+TGG - chr6_3:80292657-80292676 None:intergenic 45.0%
AGACATTGTCTCCCGTGATT+TGG - chr6_3:80292695-80292714 None:intergenic 45.0%
ACCAGAAGAGAGAGGATTCA+AGG + chr6_3:80292887-80292906 Msa0960640:intron 45.0%
TCCTTGAATCCTCTCTCTTC+TGG - chr6_3:80292891-80292910 None:intergenic 45.0%
!! TCTTTTTGGTGGGAGTGATC+TGG + chr6_3:80293370-80293389 Msa0960640:intron 45.0%
!! TCTTTTTGGTGGGAGTGATC+TGG + chr6_3:80293370-80293389 Msa0960640:intron 45.0%
GGACTCTACCAAATTCCAGA+TGG - chr6_3:80293847-80293866 None:intergenic 45.0%
!! TGTAAGCTGGTATTGATGCG+TGG + chr6_3:80293888-80293907 Msa0960640:five_prime_UTR 45.0%
GTACACAACATTTGGCCACT+AGG + chr6_3:80294219-80294238 Msa0960640:intron 45.0%
AGTGGTCATCATCAACCTAG+TGG - chr6_3:80294237-80294256 None:intergenic 45.0%
!! CTAGGTTGATGATGACCACT+AGG + chr6_3:80294237-80294256 Msa0960640:intron 45.0%
ATGCCAGTTTCCTAGTTGCT+GGG - chr6_3:80294300-80294319 None:intergenic 45.0%
AATGCCAGTTTCCTAGTTGC+TGG - chr6_3:80294301-80294320 None:intergenic 45.0%
AATTGCAACGGTGTTCCAAG+AGG + chr6_3:80295207-80295226 Msa0960640:intron 45.0%
GTGAAGAATCACAACAGCAG+CGG + chr6_3:80295355-80295374 Msa0960640:five_prime_UTR 45.0%
TGAAGAATCACAACAGCAGC+GGG + chr6_3:80295356-80295375 Msa0960640:five_prime_UTR 45.0%
ATAGCATGAAAGTGGCAGCA+GGG - chr6_3:80295459-80295478 None:intergenic 45.0%
AAGCGAAAGCAAAGTCCTAG+GGG + chr6_3:80295485-80295504 Msa0960640:CDS 45.0%
TGTTATGGTGGCTGTTATGG+AGG + chr6_3:80295509-80295528 Msa0960640:CDS 45.0%
GCTGTTATGGAGGTTGTGAT+AGG + chr6_3:80295519-80295538 Msa0960640:CDS 45.0%
GAATTTGCCAACGAGTCTTC+TGG + chr6_3:80295541-80295560 Msa0960640:CDS 45.0%
! TTGTTGGTCTCAAGTTGTGC+CGG + chr6_3:80295695-80295714 Msa0960640:CDS 45.0%
!! CAGAGGCATCAGAAGCAATC+AGG + chr6_3:80291402-80291421 Msa0960640:five_prime_UTR 50.0%
GTTCACGCCACAAAATCCGT+GGG + chr6_3:80291648-80291667 Msa0960640:five_prime_UTR 50.0%
! CAAGCAACCCACGGATTTTG+TGG - chr6_3:80291658-80291677 None:intergenic 50.0%
GGGTTGCTTGAAAGGGAATC+AGG + chr6_3:80291668-80291687 Msa0960640:five_prime_UTR 50.0%
TCATGTGATCCTTCTGCAGC+TGG + chr6_3:80291755-80291774 Msa0960640:intron 50.0%
ACCCATCACTTGTTTCGACC+TGG - chr6_3:80292076-80292095 None:intergenic 50.0%
!! GTACCGCTCTGGTGTTGATA+TGG + chr6_3:80292263-80292282 Msa0960640:five_prime_UTR 50.0%
CACGGGAGACAATGTCTTTC+TGG + chr6_3:80292698-80292717 Msa0960640:intron 50.0%
GCAGCAGCACAAGTATCCAT+AGG - chr6_3:80293046-80293065 None:intergenic 50.0%
CAGGTCACGAAGTTGTTACG+AGG + chr6_3:80293171-80293190 Msa0960640:intron 50.0%
!! AAGCTGGTATTGATGCGTGG+AGG + chr6_3:80293891-80293910 Msa0960640:five_prime_UTR 50.0%
!! AGCTGGTATTGATGCGTGGA+GGG + chr6_3:80293892-80293911 Msa0960640:five_prime_UTR 50.0%
GTCAGCTCCAAGTTTCCCAT+TGG - chr6_3:80293919-80293938 None:intergenic 50.0%
AGGCCCATCATACGTTCTGA+AGG - chr6_3:80294277-80294296 None:intergenic 50.0%
GTCGGAGCAGTTTCACAGAT+GGG + chr6_3:80294392-80294411 Msa0960640:five_prime_UTR 50.0%
TCGGAGCAGTTTCACAGATG+GGG + chr6_3:80294393-80294412 Msa0960640:five_prime_UTR 50.0%
CATAGACCAAGGGCCTTAAC+TGG + chr6_3:80294438-80294457 Msa0960640:five_prime_UTR 50.0%
TAATCGCCAGTTAAGGCCCT+TGG - chr6_3:80294447-80294466 None:intergenic 50.0%
GAAGAATCACAACAGCAGCG+GGG + chr6_3:80295357-80295376 Msa0960640:five_prime_UTR 50.0%
AAGAATCACAACAGCAGCGG+GGG + chr6_3:80295358-80295377 Msa0960640:five_prime_UTR 50.0%
GATAGCATGAAAGTGGCAGC+AGG - chr6_3:80295460-80295479 None:intergenic 50.0%
CAAAGTCCTAGGGGCTGTTA+TGG + chr6_3:80295494-80295513 Msa0960640:CDS 50.0%
GGCTGTTATGGTGGCTGTTA+TGG + chr6_3:80295506-80295525 Msa0960640:CDS 50.0%
TTCCAGACCAGAAGACTCGT+TGG - chr6_3:80295551-80295570 None:intergenic 50.0%
GAGCCTGAATCTCTGCATGA+AGG - chr6_3:80295672-80295691 None:intergenic 50.0%
GAGATTCAGGCTCTCCTTGT+TGG + chr6_3:80295679-80295698 Msa0960640:CDS 50.0%
GGCACAACTTGAGACCAACA+AGG - chr6_3:80295696-80295715 None:intergenic 50.0%
GGTTCACGCCACAAAATCCG+TGG + chr6_3:80291647-80291666 Msa0960640:five_prime_UTR 55.0%
CACACTGCACTCTGCAGTGT+TGG - chr6_3:80292862-80292881 None:intergenic 55.0%
CAACACTGCAGAGTGCAGTG+TGG + chr6_3:80292860-80292879 Msa0960640:intron 55.0%
GTGGCATGACCAGAAGAGAG+AGG + chr6_3:80292879-80292898 Msa0960640:intron 55.0%
TTGATGCGTGGAGGGTCCAA+TGG + chr6_3:80293900-80293919 Msa0960640:five_prime_UTR 55.0%
TGATGCGTGGAGGGTCCAAT+GGG + chr6_3:80293901-80293920 Msa0960640:five_prime_UTR 55.0%
GGAGGGTCCAATGGGAAACT+TGG + chr6_3:80293909-80293928 Msa0960640:five_prime_UTR 55.0%
CCAGTTTCCTAGTTGCTGGG+AGG - chr6_3:80294297-80294316 None:intergenic 55.0%
CCTCCCAGCAACTAGGAAAC+TGG + chr6_3:80294294-80294313 Msa0960640:five_prime_UTR 55.0%
AACAAGGCTGCCTTTGGCAC+TGG + chr6_3:80294326-80294345 Msa0960640:five_prime_UTR 55.0%
TCGAAGTTGGGGCATGTCAC+CGG - chr6_3:80294355-80294374 None:intergenic 55.0%
GGTCGGAGCAGTTTCACAGA+TGG + chr6_3:80294391-80294410 Msa0960640:five_prime_UTR 55.0%
CATTCGCTCGCAAGCAACTC+AGG + chr6_3:80294499-80294518 Msa0960640:five_prime_UTR 55.0%
AGTCCTAGGGGCTGTTATGG+TGG + chr6_3:80295497-80295516 Msa0960640:CDS 55.0%
TGCCAACGAGTCTTCTGGTC+TGG + chr6_3:80295546-80295565 Msa0960640:CDS 55.0%
! CTCAAGTTGTGCCGGAAAGC+TGG + chr6_3:80295703-80295722 Msa0960640:CDS 55.0%
TAGCTGAAGGCGGCGAGAGA+TGG - chr6_3:80291448-80291467 None:intergenic 60.0%
! TGATGGGCCTCCCAGCAACT+AGG + chr6_3:80294287-80294306 Msa0960640:five_prime_UTR 60.0%
!! CTGCCTTTGGCACTGGTGAC+CGG + chr6_3:80294333-80294352 Msa0960640:five_prime_UTR 60.0%
TCACCGGTCACCAGTGCCAA+AGG - chr6_3:80294339-80294358 None:intergenic 60.0%
TGAAAGTGGCAGCAGGGCAG+AGG - chr6_3:80295453-80295472 None:intergenic 60.0%
CAGCCACCATAACAGCCCCT+AGG - chr6_3:80295503-80295522 None:intergenic 60.0%
GCAGCGGGGGTGATTGCAGT+TGG + chr6_3:80295371-80295390 Msa0960640:five_prime_UTR 65.0%
Chromosome Type Strat End Strand Name
chr6_3 gene 80291154 80295748 80291154 ID=Msa0960640;Name=Msa0960640
chr6_3 mRNA 80291154 80295748 80291154 ID=Msa0960640-mRNA-1;Parent=Msa0960640;Name=Msa0960640-mRNA-1;_AED=0.14;_eAED=0.18;_QI=1179|0.83|0.85|1|0|0.28|7|0|77
chr6_3 exon 80291154 80291503 80291154 ID=Msa0960640-mRNA-1:exon:14442;Parent=Msa0960640-mRNA-1
chr6_3 exon 80291579 80291689 80291579 ID=Msa0960640-mRNA-1:exon:14443;Parent=Msa0960640-mRNA-1
chr6_3 exon 80292077 80292284 80292077 ID=Msa0960640-mRNA-1:exon:14444;Parent=Msa0960640-mRNA-1
chr6_3 exon 80293823 80293958 80293823 ID=Msa0960640-mRNA-1:exon:14445;Parent=Msa0960640-mRNA-1
chr6_3 exon 80294241 80294520 80294241 ID=Msa0960640-mRNA-1:exon:14446;Parent=Msa0960640-mRNA-1
chr6_3 exon 80295353 80295587 80295353 ID=Msa0960640-mRNA-1:exon:14447;Parent=Msa0960640-mRNA-1
chr6_3 exon 80295656 80295748 80295656 ID=Msa0960640-mRNA-1:exon:14448;Parent=Msa0960640-mRNA-1
chr6_3 five_prime_UTR 80291154 80291503 80291154 ID=Msa0960640-mRNA-1:five_prime_utr;Parent=Msa0960640-mRNA-1
chr6_3 five_prime_UTR 80291579 80291689 80291579 ID=Msa0960640-mRNA-1:five_prime_utr;Parent=Msa0960640-mRNA-1
chr6_3 five_prime_UTR 80292077 80292284 80292077 ID=Msa0960640-mRNA-1:five_prime_utr;Parent=Msa0960640-mRNA-1
chr6_3 five_prime_UTR 80293823 80293958 80293823 ID=Msa0960640-mRNA-1:five_prime_utr;Parent=Msa0960640-mRNA-1
chr6_3 five_prime_UTR 80294241 80294520 80294241 ID=Msa0960640-mRNA-1:five_prime_utr;Parent=Msa0960640-mRNA-1
chr6_3 five_prime_UTR 80295353 80295446 80295353 ID=Msa0960640-mRNA-1:five_prime_utr;Parent=Msa0960640-mRNA-1
chr6_3 CDS 80295447 80295587 80295447 ID=Msa0960640-mRNA-1:cds;Parent=Msa0960640-mRNA-1
chr6_3 CDS 80295656 80295748 80295656 ID=Msa0960640-mRNA-1:cds;Parent=Msa0960640-mRNA-1
Gene Sequence

>Msa0960640

ATGCCTCTGCCCTGCTGCCACTTTCATGCTATCACTAAAAGCGAAAGCAAAGTCCTAGGGGCTGTTATGGTGGCTGTTATGGAGGTTGTGATAGGAATTTGCCAACGAGTCTTCTGGTCTGGAACCTGTACAAATTTGCAGGTTGGTCAAATATCCTTCATGCAGAGATTCAGGCTCTCCTTGTTGGTCTCAAGTTGTGCCGGAAAGCTGGCTTTCGAAATTATTGATATATAG
Protein sequence

>Msa0960640

MPLPCCHFHAITKSESKVLGAVMVAVMEVVIGICQRVFWSGTCTNLQVGQISFMQRFRLSLLVSSCAGKLAFEIIDI*