Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0964180 | G7KMN3 | 63.194 | 144 | 4 | 2 | 1 | 96 | 109 | 251 | 2.28e-46 | 167 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0059770 | Msa0964180 | 0.806577 | 7.686998e-50 | -8.615850e-47 |
| Msa0068630 | Msa0964180 | 0.823958 | 1.046207e-53 | -8.615850e-47 |
| Msa0675510 | Msa0964180 | 0.812811 | 3.512793e-51 | -8.615850e-47 |
| Msa0153200 | Msa0964180 | 0.807003 | 6.250319e-50 | -8.615850e-47 |
| Msa0548060 | Msa0964180 | 0.832720 | 8.047952e-56 | -8.615850e-47 |
| Msa0902020 | Msa0964180 | 0.826458 | 2.682578e-54 | -8.615850e-47 |
| Msa0912370 | Msa0964180 | 0.800097 | 1.690859e-48 | -8.615850e-47 |
| Msa0963310 | Msa0964180 | 0.812612 | 3.883321e-51 | -8.615850e-47 |
| Msa0964180 | Msa1232060 | 0.825950 | 3.543913e-54 | -8.615850e-47 |
| Msa0964180 | Msa1463140 | 0.806988 | 6.296292e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0964180 | MtrunA17_Chr6g0484051 | 63.194 | 144 | 4 | 2 | 1 | 96 | 106 | 248 | 4.63e-50 | 166 |
| Msa0964180 | MtrunA17_Chr6g0467631 | 58.065 | 62 | 25 | 1 | 3 | 64 | 103 | 163 | 1.55e-18 | 79.0 |
| Msa0964180 | MtrunA17_Chr6g0483821 | 35.135 | 148 | 42 | 3 | 1 | 97 | 112 | 256 | 3.03e-18 | 78.2 |
| Msa0964180 | MtrunA17_Chr6g0484061 | 38.525 | 122 | 31 | 2 | 3 | 81 | 104 | 224 | 5.00e-18 | 75.9 |
| Msa0964180 | MtrunA17_Chr6g0483931 | 35.099 | 151 | 41 | 4 | 1 | 97 | 110 | 257 | 3.02e-15 | 69.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 16 sgRNAs with CRISPR-Local
Find 532 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTGAGGAGCACAAATATTT+TGG | 0.102282 | 6_3:-90553567 | None:intergenic |
| TGGTTTGAATAAGGGGTTTA+AGG | 0.179570 | 6_3:+90554046 | Msa0964180:CDS |
| TAAGGAATGTTTAAGGTGTT+TGG | 0.241502 | 6_3:+90554085 | Msa0964180:CDS |
| TCTTGAAAGTGGTTTGAATA+AGG | 0.292997 | 6_3:+90554037 | Msa0964180:intron |
| CTTGAAAGTGGTTTGAATAA+GGG | 0.307912 | 6_3:+90554038 | Msa0964180:intron |
| AAGGAATGTTTAAGGTGTTT+GGG | 0.335490 | 6_3:+90554086 | Msa0964180:CDS |
| GGTGAAGTATAGTATGAATA+AGG | 0.338802 | 6_3:+90554067 | Msa0964180:CDS |
| GTATGAATAAGGAATGTTTA+AGG | 0.339549 | 6_3:+90554078 | Msa0964180:CDS |
| TTATAATATTGAAACAAAGT+TGG | 0.413194 | 6_3:-90553610 | None:intergenic |
| TTGAAAGTGGTTTGAATAAG+GGG | 0.482559 | 6_3:+90554039 | Msa0964180:intron |
| GGAACTACAATTATAGTGTA+TGG | 0.485077 | 6_3:-90553653 | None:intergenic |
| GGATTTGAAGATAAAGATTG+TGG | 0.486417 | 6_3:+90554107 | Msa0964180:CDS |
| AAATAAGTTTCATCAAATTG+AGG | 0.503217 | 6_3:-90553583 | None:intergenic |
| ATACTTGAAAATTCTCTATG+TGG | 0.537645 | 6_3:+90553691 | Msa0964180:CDS |
| TACTTGAAAATTCTCTATGT+GGG | 0.544752 | 6_3:+90553692 | Msa0964180:CDS |
| AAGTATATATTGAGAGACAG+TGG | 0.636632 | 6_3:-90553674 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATAATAATCTAAATGAA+GGG | - | chr6_3:90554653-90554672 | None:intergenic | 10.0% |
| !! | TAAAATAATAATCTAAATGA+AGG | - | chr6_3:90554654-90554673 | None:intergenic | 10.0% |
| !! | TTATAATATTGAAACAAAGT+TGG | - | chr6_3:90553613-90553632 | None:intergenic | 15.0% |
| !!! | ATCGAAATAATTTTAATGTA+TGG | + | chr6_3:90554442-90554461 | Msa0964180:intron | 15.0% |
| !!! | CAAAATTTGAAGTAAAATAA+TGG | + | chr6_3:90559893-90559912 | Msa0964180:intron | 15.0% |
| !! | GAAATAAATATATGATTAAG+CGG | + | chr6_3:90559951-90559970 | Msa0964180:intron | 15.0% |
| !!! | ATTTTTTATGAAATTGCTAA+AGG | + | chr6_3:90561152-90561171 | Msa0964180:intron | 15.0% |
| !!! | TTTTTTATGAAATTGCTAAA+GGG | + | chr6_3:90561153-90561172 | Msa0964180:intron | 15.0% |
| !! | AAATAAGTTTCATCAAATTG+AGG | - | chr6_3:90553586-90553605 | None:intergenic | 20.0% |
| !! | TAATGTGTGGAAATAAATAA+TGG | - | chr6_3:90554301-90554320 | None:intergenic | 20.0% |
| !! | TTAAGTACTAAATTAATGTG+TGG | - | chr6_3:90554314-90554333 | None:intergenic | 20.0% |
| !!! | TTTTTTTATCTCTCTTTCTA+TGG | + | chr6_3:90554335-90554354 | Msa0964180:intron | 20.0% |
| !! | CATTAAAATTATTTCGATGA+TGG | - | chr6_3:90554440-90554459 | None:intergenic | 20.0% |
| !!! | ATTTTTTGCTCAATATAACA+AGG | - | chr6_3:90554496-90554515 | None:intergenic | 20.0% |
| !! | TTCAAAACAAATTAGTGAAT+CGG | + | chr6_3:90554834-90554853 | Msa0964180:intron | 20.0% |
| !!! | AATAACTTGTTCTTAATTTG+TGG | + | chr6_3:90555029-90555048 | Msa0964180:intron | 20.0% |
| !!! | TAATTTGTGGTATTTCATAT+TGG | + | chr6_3:90555042-90555061 | Msa0964180:intron | 20.0% |
| !! | AAACTAGTATTATTCAAAGA+GGG | - | chr6_3:90555232-90555251 | None:intergenic | 20.0% |
| !! | AAAACTAGTATTATTCAAAG+AGG | - | chr6_3:90555233-90555252 | None:intergenic | 20.0% |
| !!! | AATAACAGAAACTGTTTTTA+GGG | - | chr6_3:90555301-90555320 | None:intergenic | 20.0% |
| !!! | AAATAACAGAAACTGTTTTT+AGG | - | chr6_3:90555302-90555321 | None:intergenic | 20.0% |
| !! | TGTTATTGTTGTGAAAAATA+TGG | + | chr6_3:90556226-90556245 | Msa0964180:intron | 20.0% |
| !! | TTTACTGAAAACTAAGAATA+TGG | + | chr6_3:90556849-90556868 | Msa0964180:intron | 20.0% |
| !! | AAAACTAAGAATATGGTTAT+TGG | + | chr6_3:90556856-90556875 | Msa0964180:intron | 20.0% |
| !! | AAACTAAGAATATGGTTATT+GGG | + | chr6_3:90556857-90556876 | Msa0964180:intron | 20.0% |
| !! | AAACTAGTATTATTCAAAGA+GGG | - | chr6_3:90555232-90555251 | None:intergenic | 20.0% |
| !! | AAAACTAGTATTATTCAAAG+AGG | - | chr6_3:90555233-90555252 | None:intergenic | 20.0% |
| !!! | AATAACAGAAACTGTTTTTA+TGG | - | chr6_3:90555301-90555320 | None:intergenic | 20.0% |
| !!! | TCCAATATAGTTTGTTTTTT+AGG | + | chr6_3:90560003-90560022 | Msa0964180:intron | 20.0% |
| !! | TCCTAAAAAACAAACTATAT+TGG | - | chr6_3:90560007-90560026 | None:intergenic | 20.0% |
| !! | ATAATGATAGTATGTACTTT+AGG | - | chr6_3:90560277-90560296 | None:intergenic | 20.0% |
| !! | AAATTAGTGTCAACTAATAT+AGG | - | chr6_3:90560331-90560350 | None:intergenic | 20.0% |
| !! | ATTAGCATTAAATATGTACT+AGG | + | chr6_3:90560376-90560395 | Msa0964180:intron | 20.0% |
| !!! | AATCTTTTCATAATCATAAC+AGG | + | chr6_3:90560510-90560529 | Msa0964180:intron | 20.0% |
| !! | TCTTCAAAAAAAATCTTAAC+AGG | + | chr6_3:90560647-90560666 | Msa0964180:intron | 20.0% |
| !! | TTTGTCTTGATTATTCTTTA+TGG | - | chr6_3:90560738-90560757 | None:intergenic | 20.0% |
| !! | TCATCTAACAAAATATTATG+TGG | - | chr6_3:90561244-90561263 | None:intergenic | 20.0% |
| ! | ATACTTGAAAATTCTCTATG+TGG | + | chr6_3:90553691-90553710 | Msa0964180:CDS | 25.0% |
| ! | TACTTGAAAATTCTCTATGT+GGG | + | chr6_3:90553692-90553711 | Msa0964180:CDS | 25.0% |
| ! | TACCAATATAACAGAAAGAA+GGG | - | chr6_3:90553726-90553745 | None:intergenic | 25.0% |
| ! | TTACCAATATAACAGAAAGA+AGG | - | chr6_3:90553727-90553746 | None:intergenic | 25.0% |
| ! | CCATAATAATCATCATTCAT+AGG | - | chr6_3:90553999-90554018 | None:intergenic | 25.0% |
| ! | CCTATGAATGATGATTATTA+TGG | + | chr6_3:90553996-90554015 | Msa0964180:intron | 25.0% |
| !!! | TATTATGGTTATTTTCAACG+TGG | + | chr6_3:90554011-90554030 | Msa0964180:intron | 25.0% |
| ! | GTATGAATAAGGAATGTTTA+AGG | + | chr6_3:90554078-90554097 | Msa0964180:CDS | 25.0% |
| ! | ACAATTATCATAATAGCAAG+AGG | - | chr6_3:90554171-90554190 | None:intergenic | 25.0% |
| ! | TATTATGATAATTGTCCACA+TGG | + | chr6_3:90554176-90554195 | Msa0964180:intron | 25.0% |
| ! | GTGTATACACAATTACAATA+GGG | + | chr6_3:90554411-90554430 | Msa0964180:intron | 25.0% |
| ! | ATATAACAAGGATCTACATA+TGG | - | chr6_3:90554484-90554503 | None:intergenic | 25.0% |
| ! | AAAGAAGAATTGGGATATAT+GGG | + | chr6_3:90555475-90555494 | Msa0964180:intron | 25.0% |
| ! | TGGTTCAATAAAGATAGAAA+GGG | + | chr6_3:90556268-90556287 | Msa0964180:intron | 25.0% |
| !! | ATCAGAATGTGAATTTTCTT+GGG | - | chr6_3:90556323-90556342 | None:intergenic | 25.0% |
| ! | AACTAAGAATATGGTTATTG+GGG | + | chr6_3:90556858-90556877 | Msa0964180:intron | 25.0% |
| ! | ATAAGATTCAAAATCTCTAG+AGG | - | chr6_3:90557214-90557233 | None:intergenic | 25.0% |
| ! | TAAAAGTGAAGCAATGATAT+TGG | + | chr6_3:90557551-90557570 | Msa0964180:intron | 25.0% |
| !! | ATTACAATTTTCTTAGAGTG+TGG | - | chr6_3:90557615-90557634 | None:intergenic | 25.0% |
| ! | TATTGAGAAGAATCAAACAT+GGG | + | chr6_3:90557992-90558011 | Msa0964180:intron | 25.0% |
| ! | ATAAGGCAATAGATGTTAAA+TGG | + | chr6_3:90558039-90558058 | Msa0964180:intron | 25.0% |
| ! | TAAGGCAATAGATGTTAAAT+GGG | + | chr6_3:90558040-90558059 | Msa0964180:intron | 25.0% |
| !! | AAACTAAACAAGGCTTTATA+TGG | + | chr6_3:90558400-90558419 | Msa0964180:intron | 25.0% |
| ! | ACTGATCATATATCTATATG+TGG | + | chr6_3:90558543-90558562 | Msa0964180:intron | 25.0% |
| ! | TTTCTAATGTTAGAATTTGC+AGG | - | chr6_3:90558784-90558803 | None:intergenic | 25.0% |
| !!! | AAGATTCTGAGATACATAAA+TGG | + | chr6_3:90558967-90558986 | Msa0964180:intron | 25.0% |
| !!! | AGAAACTGTTTTTATGGTTA+GGG | - | chr6_3:90559768-90559787 | None:intergenic | 25.0% |
| ! | TTTGTCTCATTAACTATTTG+TGG | + | chr6_3:90560155-90560174 | Msa0964180:intron | 25.0% |
| ! | GCTAATGTAAGAAAAGATAA+CGG | - | chr6_3:90560245-90560264 | None:intergenic | 25.0% |
| ! | ACTAATATAGGCAAAAGTTA+GGG | - | chr6_3:90560319-90560338 | None:intergenic | 25.0% |
| ! | AACTAATATAGGCAAAAGTT+AGG | - | chr6_3:90560320-90560339 | None:intergenic | 25.0% |
| ! | CTATGTAATCAAACTTACAT+TGG | - | chr6_3:90560429-90560448 | None:intergenic | 25.0% |
| ! | AGTTTGATTACATAGAGTTA+TGG | + | chr6_3:90560434-90560453 | Msa0964180:intron | 25.0% |
| ! | CTTGTATGTGAAATAAAAGA+TGG | - | chr6_3:90560714-90560733 | None:intergenic | 25.0% |
| !! | AAATTCTTCATCTTTTCCTT+TGG | - | chr6_3:90560958-90560977 | None:intergenic | 25.0% |
| ! | ATCTATGAATTCATGTCTAA+TGG | + | chr6_3:90561068-90561087 | Msa0964180:intron | 25.0% |
| ! | AAGTCTGATGTTTATAGTTA+CGG | + | chr6_3:90561409-90561428 | Msa0964180:intron | 25.0% |
| ! | AGAGTTATTGAAATGTTAGA+AGG | + | chr6_3:90561655-90561674 | Msa0964180:intron | 25.0% |
| !! | TTGAGGAGCACAAATATTTT+GGG | - | chr6_3:90553569-90553588 | None:intergenic | 30.0% |
| !! | ATTGAGGAGCACAAATATTT+TGG | - | chr6_3:90553570-90553589 | None:intergenic | 30.0% |
| GGAACTACAATTATAGTGTA+TGG | - | chr6_3:90553656-90553675 | None:intergenic | 30.0% | |
| AAGTATATATTGAGAGACAG+TGG | - | chr6_3:90553677-90553696 | None:intergenic | 30.0% | |
| AACCCTTCTTTCTGTTATAT+TGG | + | chr6_3:90553721-90553740 | Msa0964180:intron | 30.0% | |
| ! | GTAATGATGACGAATTGTTA+AGG | + | chr6_3:90553743-90553762 | Msa0964180:intron | 30.0% |
| AATTGTTAAGGAATTGCATG+AGG | + | chr6_3:90553755-90553774 | Msa0964180:intron | 30.0% | |
| ATTGTTAAGGAATTGCATGA+GGG | + | chr6_3:90553756-90553775 | Msa0964180:intron | 30.0% | |
| TCTTGAAAGTGGTTTGAATA+AGG | + | chr6_3:90554037-90554056 | Msa0964180:intron | 30.0% | |
| CTTGAAAGTGGTTTGAATAA+GGG | + | chr6_3:90554038-90554057 | Msa0964180:intron | 30.0% | |
| TTGAAAGTGGTTTGAATAAG+GGG | + | chr6_3:90554039-90554058 | Msa0964180:intron | 30.0% | |
| GGTGAAGTATAGTATGAATA+AGG | + | chr6_3:90554067-90554086 | Msa0964180:CDS | 30.0% | |
| ! | TAAGGAATGTTTAAGGTGTT+TGG | + | chr6_3:90554085-90554104 | Msa0964180:CDS | 30.0% |
| ! | AAGGAATGTTTAAGGTGTTT+GGG | + | chr6_3:90554086-90554105 | Msa0964180:CDS | 30.0% |
| GGATTTGAAGATAAAGATTG+TGG | + | chr6_3:90554107-90554126 | Msa0964180:CDS | 30.0% | |
| TTTCTTTATCTCTATGTCTC+TGG | + | chr6_3:90554386-90554405 | Msa0964180:intron | 30.0% | |
| GGTGTATACACAATTACAAT+AGG | + | chr6_3:90554410-90554429 | Msa0964180:intron | 30.0% | |
| ACTAAATCTAGCTAAACGTA+AGG | - | chr6_3:90555144-90555163 | None:intergenic | 30.0% | |
| !!! | AGAAACTGTTTTTAGGGTTA+GGG | - | chr6_3:90555295-90555314 | None:intergenic | 30.0% |
| TTCTTGATGGAAAGAAGAAT+TGG | + | chr6_3:90555465-90555484 | Msa0964180:intron | 30.0% | |
| TCTTGATGGAAAGAAGAATT+GGG | + | chr6_3:90555466-90555485 | Msa0964180:intron | 30.0% | |
| GAAAGAAGAATTGGGATATA+TGG | + | chr6_3:90555474-90555493 | Msa0964180:intron | 30.0% | |
| ! | AAGCAGATGAAAGTGATTTT+TGG | + | chr6_3:90555500-90555519 | Msa0964180:intron | 30.0% |
| ! | AGCAGATGAAAGTGATTTTT+GGG | + | chr6_3:90555501-90555520 | Msa0964180:intron | 30.0% |
| GTTCTTGAAATTGTTAGCAA+TGG | + | chr6_3:90555533-90555552 | Msa0964180:intron | 30.0% | |
| AGTGAAGAAGATAAAGTTAC+AGG | + | chr6_3:90555748-90555767 | Msa0964180:intron | 30.0% | |
| CATAACTGATCTATCAGAAA+GGG | - | chr6_3:90555882-90555901 | None:intergenic | 30.0% | |
| AAGAATCCAAGAAAGATTTG+TGG | + | chr6_3:90556089-90556108 | Msa0964180:intron | 30.0% | |
| GGAAAGAACAATCAAAAACA+AGG | + | chr6_3:90556124-90556143 | Msa0964180:intron | 30.0% | |
| ! | AAACCTGAATCTTCTAAGAA+TGG | + | chr6_3:90556151-90556170 | Msa0964180:intron | 30.0% |
| ! | TTGATTCTTTGAGGAAGATT+CGG | - | chr6_3:90556179-90556198 | None:intergenic | 30.0% |
| AATCTTCCTCAAAGAATCAA+GGG | + | chr6_3:90556179-90556198 | Msa0964180:intron | 30.0% | |
| AGGGAAGAAAGATAAAAGAA+AGG | + | chr6_3:90556198-90556217 | Msa0964180:intron | 30.0% | |
| CTGGTTCAATAAAGATAGAA+AGG | + | chr6_3:90556267-90556286 | Msa0964180:intron | 30.0% | |
| ! | CATCAGAATGTGAATTTTCT+TGG | - | chr6_3:90556324-90556343 | None:intergenic | 30.0% |
| ATACTTGGTATCTTGATACT+GGG | + | chr6_3:90556401-90556420 | Msa0964180:intron | 30.0% | |
| GAAAGGTTATTCAGTAACTA+TGG | + | chr6_3:90556639-90556658 | Msa0964180:intron | 30.0% | |
| CAATAGATTGTACAGCTTTA+AGG | - | chr6_3:90556674-90556693 | None:intergenic | 30.0% | |
| ATGTTAGTTGAAAATCAGAG+TGG | + | chr6_3:90557144-90557163 | Msa0964180:intron | 30.0% | |
| TGAATCTTATTGCTCAAATC+AGG | + | chr6_3:90557224-90557243 | Msa0964180:intron | 30.0% | |
| GAATCTTATTGCTCAAATCA+GGG | + | chr6_3:90557225-90557244 | Msa0964180:intron | 30.0% | |
| ! | AAACAGAAGTTTGCTTGATA+TGG | + | chr6_3:90557308-90557327 | Msa0964180:intron | 30.0% |
| TTATCCTTCATCTTCTTAGT+AGG | - | chr6_3:90557420-90557439 | None:intergenic | 30.0% | |
| TACTAAGAAGATGAAGGATA+AGG | + | chr6_3:90557419-90557438 | Msa0964180:intron | 30.0% | |
| AGTTATCATTGAAGGTAACA+AGG | + | chr6_3:90557710-90557729 | Msa0964180:intron | 30.0% | |
| ! | AAAGCAGCTTTATAATCTAC+AGG | - | chr6_3:90557927-90557946 | None:intergenic | 30.0% |
| CTATTGAGAAGAATCAAACA+TGG | + | chr6_3:90557991-90558010 | Msa0964180:intron | 30.0% | |
| ! | GTGAAATCAGCTTTTCTAAA+TGG | + | chr6_3:90558304-90558323 | Msa0964180:intron | 30.0% |
| !!! | GACAAGTTTTTTGTTGATCA+AGG | + | chr6_3:90558460-90558479 | Msa0964180:intron | 30.0% |
| GAACATGGAGTTTATGTAAA+AGG | + | chr6_3:90558502-90558521 | Msa0964180:intron | 30.0% | |
| ! | TGAGTTTGAAATGACAGATT+TGG | + | chr6_3:90558630-90558649 | Msa0964180:intron | 30.0% |
| ! | GAGTTTGAAATGACAGATTT+GGG | + | chr6_3:90558631-90558650 | Msa0964180:intron | 30.0% |
| ! | CTGAGAAATGAGTTTTACTA+GGG | - | chr6_3:90558939-90558958 | None:intergenic | 30.0% |
| ATAAATGGTACTTTGCAGTA+TGG | + | chr6_3:90558982-90559001 | Msa0964180:intron | 30.0% | |
| ! | AAACTGGTTGAGGAATATTT+TGG | + | chr6_3:90559224-90559243 | Msa0964180:intron | 30.0% |
| ! | TGCTTTGATGGTTTGAATTA+AGG | + | chr6_3:90559504-90559523 | Msa0964180:intron | 30.0% |
| ! | TTTGATGGTTTGAATTAAGG+AGG | + | chr6_3:90559507-90559526 | Msa0964180:intron | 30.0% |
| ! | TTTGAATTAAGGAGGAGTAT+TGG | + | chr6_3:90559515-90559534 | Msa0964180:intron | 30.0% |
| ACTAAATCTAGCTAAACGTA+AGG | - | chr6_3:90555144-90555163 | None:intergenic | 30.0% | |
| !!! | CAGAAACTGTTTTTATGGTT+AGG | - | chr6_3:90559769-90559788 | None:intergenic | 30.0% |
| AAACATACCACTGAAATGTT+GGG | - | chr6_3:90559854-90559873 | None:intergenic | 30.0% | |
| TAAACATACCACTGAAATGT+TGG | - | chr6_3:90559855-90559874 | None:intergenic | 30.0% | |
| AGGGTTTCATTAATGAACTA+CGG | - | chr6_3:90560300-90560319 | None:intergenic | 30.0% | |
| GGTTATGGTACAGTATATAA+AGG | + | chr6_3:90560885-90560904 | Msa0964180:intron | 30.0% | |
| AAGATATTGAACACATCCAA+AGG | + | chr6_3:90560939-90560958 | Msa0964180:intron | 30.0% | |
| AGATGAAGAATTTATGAACG+AGG | + | chr6_3:90560965-90560984 | Msa0964180:intron | 30.0% | |
| GTCAAAACAAAATCCAAGAA+GGG | - | chr6_3:90561030-90561049 | None:intergenic | 30.0% | |
| !!! | CTTCTTGGATTTTGTTTTGA+CGG | + | chr6_3:90561029-90561048 | Msa0964180:intron | 30.0% |
| AGACATGAATTCATAGATCA+GGG | - | chr6_3:90561066-90561085 | None:intergenic | 30.0% | |
| TAGACATGAATTCATAGATC+AGG | - | chr6_3:90561067-90561086 | None:intergenic | 30.0% | |
| AAACCTATCAATCTCTAAGT+TGG | + | chr6_3:90561126-90561145 | Msa0964180:intron | 30.0% | |
| AACCTATCAATCTCTAAGTT+GGG | + | chr6_3:90561127-90561146 | Msa0964180:intron | 30.0% | |
| ! | TAGATGAGAATTTTTGTCCA+AGG | + | chr6_3:90561257-90561276 | Msa0964180:intron | 30.0% |
| ATGATGTTGTTGGAAATGAT+CGG | + | chr6_3:90561433-90561452 | Msa0964180:intron | 30.0% | |
| TGAGAAATACTTTCCTGATT+GGG | + | chr6_3:90561495-90561514 | Msa0964180:intron | 30.0% | |
| AGAAGGCAATATGAATTCAT+TGG | + | chr6_3:90561672-90561691 | Msa0964180:intron | 30.0% | |
| ! | TTTCACGAAATTGACGATTT+TGG | - | chr6_3:90561742-90561761 | None:intergenic | 30.0% |
| !!! | GAGCACAAATATTTTGGGAT+AGG | - | chr6_3:90553564-90553583 | None:intergenic | 35.0% |
| ATAGGAAAATCATCTCCTAC+CGG | - | chr6_3:90553981-90554000 | None:intergenic | 35.0% | |
| TGGTTTGAATAAGGGGTTTA+AGG | + | chr6_3:90554046-90554065 | Msa0964180:CDS | 35.0% | |
| GAAAAATCACTAGATCCATG+TGG | - | chr6_3:90554194-90554213 | None:intergenic | 35.0% | |
| CAAATTAGTGAATCGGAGAT+CGG | + | chr6_3:90554841-90554860 | Msa0964180:intron | 35.0% | |
| CATGATTGGAGATGGTAAAA+CGG | + | chr6_3:90554890-90554909 | Msa0964180:intron | 35.0% | |
| !!! | CAGAAACTGTTTTTAGGGTT+AGG | - | chr6_3:90555296-90555315 | None:intergenic | 35.0% |
| GTATAACAGTGTTGTATGTG+AGG | - | chr6_3:90555358-90555377 | None:intergenic | 35.0% | |
| ! | TGCTCTAGATACCAATTGTT+GGG | - | chr6_3:90555381-90555400 | None:intergenic | 35.0% |
| ! | ATGCTCTAGATACCAATTGT+TGG | - | chr6_3:90555382-90555401 | None:intergenic | 35.0% |
| TTCATGGTTGATCTTCTTCT+TGG | - | chr6_3:90555413-90555432 | None:intergenic | 35.0% | |
| AGATCAACCATGAATTCCAA+CGG | + | chr6_3:90555419-90555438 | Msa0964180:intron | 35.0% | |
| AATATTCCCGTTGGAATTCA+TGG | - | chr6_3:90555429-90555448 | None:intergenic | 35.0% | |
| TTCTTCTTTCCATCAAGAAC+TGG | - | chr6_3:90555464-90555483 | None:intergenic | 35.0% | |
| ! | ACATTGGTGAAGTATTTCAG+TGG | + | chr6_3:90555716-90555735 | Msa0964180:intron | 35.0% |
| GTATGAGTTGCTTCAAATGA+AGG | + | chr6_3:90555784-90555803 | Msa0964180:intron | 35.0% | |
| GAAGGATGAAGAAAAGATTG+AGG | + | chr6_3:90555802-90555821 | Msa0964180:intron | 35.0% | |
| ACAAATCAGATGAAGCTTTG+TGG | + | chr6_3:90555851-90555870 | Msa0964180:intron | 35.0% | |
| CCATAACTGATCTATCAGAA+AGG | - | chr6_3:90555883-90555902 | None:intergenic | 35.0% | |
| CCTTTCTGATAGATCAGTTA+TGG | + | chr6_3:90555880-90555899 | Msa0964180:intron | 35.0% | |
| CCAAGTGATCAAATTGAGAT+GGG | - | chr6_3:90555925-90555944 | None:intergenic | 35.0% | |
| ACCAAGTGATCAAATTGAGA+TGG | - | chr6_3:90555926-90555945 | None:intergenic | 35.0% | |
| ! | TCACTTGGTGATAATGTATG+AGG | + | chr6_3:90555937-90555956 | Msa0964180:intron | 35.0% |
| GATAATGTATGAGGAAACCA+AGG | + | chr6_3:90555946-90555965 | Msa0964180:intron | 35.0% | |
| GTGAAGATTGAAGAACTTCA+AGG | + | chr6_3:90555980-90555999 | Msa0964180:intron | 35.0% | |
| GATGAAGATAACTGGTAGAA+AGG | + | chr6_3:90556021-90556040 | Msa0964180:intron | 35.0% | |
| CTTCTTCCACAAATCTTTCT+TGG | - | chr6_3:90556098-90556117 | None:intergenic | 35.0% | |
| AGATTTGTGGAAGAAGAGAA+AGG | + | chr6_3:90556102-90556121 | Msa0964180:intron | 35.0% | |
| GATTTGTGGAAGAAGAGAAA+GGG | + | chr6_3:90556103-90556122 | Msa0964180:intron | 35.0% | |
| GAATCTTCCTCAAAGAATCA+AGG | + | chr6_3:90556178-90556197 | Msa0964180:intron | 35.0% | |
| TTTCTTCCCTTGATTCTTTG+AGG | - | chr6_3:90556188-90556207 | None:intergenic | 35.0% | |
| TGCTGATACAGTCATGTTAA+TGG | + | chr6_3:90556342-90556361 | Msa0964180:intron | 35.0% | |
| GATACTTGGTATCTTGATAC+TGG | + | chr6_3:90556400-90556419 | Msa0964180:intron | 35.0% | |
| AAATCACATGACTGGTAAGA+AGG | + | chr6_3:90556429-90556448 | Msa0964180:intron | 35.0% | |
| AAGTATGAAAGCAGAAGGTA+TGG | + | chr6_3:90556510-90556529 | Msa0964180:intron | 35.0% | |
| ! | AGTATGAAAGCAGAAGGTAT+GGG | + | chr6_3:90556511-90556530 | Msa0964180:intron | 35.0% |
| ATGGGAAATGTGATCATACA+AGG | + | chr6_3:90556529-90556548 | Msa0964180:intron | 35.0% | |
| AAAAAGAGCAGTGATAGAAG+AGG | + | chr6_3:90556561-90556580 | Msa0964180:intron | 35.0% | |
| AATAACCTTTCTCTATGAGC+TGG | - | chr6_3:90556630-90556649 | None:intergenic | 35.0% | |
| AGGTTATTCAGTAACTATGG+AGG | + | chr6_3:90556642-90556661 | Msa0964180:intron | 35.0% | |
| !!! | ATTCACTATGCTGGTTTTGA+AGG | - | chr6_3:90556737-90556756 | None:intergenic | 35.0% |
| CAAAACCAGCATAGTGAATA+AGG | + | chr6_3:90556738-90556757 | Msa0964180:intron | 35.0% | |
| AAGATGAAGAATCTGAACTC+TGG | + | chr6_3:90556788-90556807 | Msa0964180:intron | 35.0% | |
| ! | ATATGCTGCATGACTTTTCA+GGG | - | chr6_3:90556900-90556919 | None:intergenic | 35.0% |
| TCATGCAGCATATGTTTAGT+AGG | + | chr6_3:90556907-90556926 | Msa0964180:intron | 35.0% | |
| !! | GTTTAGTAGGAAAGCATTCT+AGG | + | chr6_3:90556920-90556939 | Msa0964180:intron | 35.0% |
| AGCAAAGCATGTATTGAATG+TGG | + | chr6_3:90556972-90556991 | Msa0964180:intron | 35.0% | |
| CTGTATGTAGGAGTTTCTAT+AGG | - | chr6_3:90557018-90557037 | None:intergenic | 35.0% | |
| ATAGAAACTCCTACATACAG+TGG | + | chr6_3:90557018-90557037 | Msa0964180:intron | 35.0% | |
| TATCTGTTTCCACTGTATGT+AGG | - | chr6_3:90557030-90557049 | None:intergenic | 35.0% | |
| CATTTGTAGATGCGTATTCA+AGG | + | chr6_3:90557058-90557077 | Msa0964180:intron | 35.0% | |
| ! | CTGAAGATTCTAAGAACTGA+TGG | + | chr6_3:90557174-90557193 | Msa0964180:intron | 35.0% |
| ! | AAGATTCTAAGAACTGATGG+AGG | + | chr6_3:90557177-90557196 | Msa0964180:intron | 35.0% |
| ! | AGATTCTAAGAACTGATGGA+GGG | + | chr6_3:90557178-90557197 | Msa0964180:intron | 35.0% |
| ! | ATAAGGTACCTGAAGAGATT+TGG | + | chr6_3:90557436-90557455 | Msa0964180:intron | 35.0% |
| ! | ATCAGTCACTTGAAGGTTTT+TGG | + | chr6_3:90557477-90557496 | Msa0964180:intron | 35.0% |
| AGTGAAGCAATGATATTGGT+TGG | + | chr6_3:90557555-90557574 | Msa0964180:intron | 35.0% | |
| TTGGTTGGATATCATAACAC+TGG | + | chr6_3:90557570-90557589 | Msa0964180:intron | 35.0% | |
| AAGTGCTTGAAGATGAATTC+TGG | + | chr6_3:90557649-90557668 | Msa0964180:intron | 35.0% | |
| AGTGCTTGAAGATGAATTCT+GGG | + | chr6_3:90557650-90557669 | Msa0964180:intron | 35.0% | |
| !! | TTGAAGATGAATTCTGGGAT+TGG | + | chr6_3:90557655-90557674 | Msa0964180:intron | 35.0% |
| GAGAAGCAAGTTATCATTGA+AGG | + | chr6_3:90557702-90557721 | Msa0964180:intron | 35.0% | |
| !! | AATTGAAGAAGTACCTGATG+AGG | + | chr6_3:90557767-90557786 | Msa0964180:intron | 35.0% |
| GAAGAATCAAACATGGGATT+TGG | + | chr6_3:90557998-90558017 | Msa0964180:intron | 35.0% | |
| CAAGTTACCTGATGGAAATA+AGG | + | chr6_3:90558022-90558041 | Msa0964180:intron | 35.0% | |
| !! | TCTATTGCCTTATTTCCATC+AGG | - | chr6_3:90558032-90558051 | None:intergenic | 35.0% |
| ATGTACCATTTAGCAAATCC+TGG | - | chr6_3:90558236-90558255 | None:intergenic | 35.0% | |
| TTAGAAGAGACTATATCACC+TGG | + | chr6_3:90558279-90558298 | Msa0964180:intron | 35.0% | |
| CTCCAGGATTCATTATCAAA+GGG | + | chr6_3:90558359-90558378 | Msa0964180:intron | 35.0% | |
| !! | TTCCCTTTGATAATGAATCC+TGG | - | chr6_3:90558364-90558383 | None:intergenic | 35.0% |
| TTATCAAAGGGAAAGAAGAC+AGG | + | chr6_3:90558371-90558390 | Msa0964180:intron | 35.0% | |
| TATCAAAGGGAAAGAAGACA+GGG | + | chr6_3:90558372-90558391 | Msa0964180:intron | 35.0% | |
| ! | CTTGTCAATTCTTTTGTTCC+AGG | - | chr6_3:90558446-90558465 | None:intergenic | 35.0% |
| AAGAAATGCATAGCTGAACA+TGG | + | chr6_3:90558487-90558506 | Msa0964180:intron | 35.0% | |
| ! | TCTATATGTGGATGACCTTT+TGG | + | chr6_3:90558555-90558574 | Msa0964180:intron | 35.0% |
| ! | GAGTTTCTGAGAACTTCAAA+AGG | + | chr6_3:90558679-90558698 | Msa0964180:intron | 35.0% |
| ATAAGACTCCTGAACATAGT+TGG | - | chr6_3:90558838-90558857 | None:intergenic | 35.0% | |
| ! | ACTATGTTCAGGAGTCTTAT+TGG | + | chr6_3:90558838-90558857 | Msa0964180:intron | 35.0% |
| TGAGATACTTATGTCAAAGC+AGG | + | chr6_3:90558866-90558885 | Msa0964180:intron | 35.0% | |
| ! | GCTGAGAAATGAGTTTTACT+AGG | - | chr6_3:90558940-90558959 | None:intergenic | 35.0% |
| !! | GCTTAGTTTCTAGTGCATTA+GGG | - | chr6_3:90559017-90559036 | None:intergenic | 35.0% |
| !! | TGCTTAGTTTCTAGTGCATT+AGG | - | chr6_3:90559018-90559037 | None:intergenic | 35.0% |
| !! | AGGTTTTGTATTCATGTTGC+AGG | + | chr6_3:90559104-90559123 | Msa0964180:intron | 35.0% |
| !! | GGTTTTGTATTCATGTTGCA+GGG | + | chr6_3:90559105-90559124 | Msa0964180:intron | 35.0% |
| TTGTCAATCAGAAGCTTGAT+AGG | - | chr6_3:90559276-90559295 | None:intergenic | 35.0% | |
| ! | TGCTTTTACCATGTGCAATA+GGG | - | chr6_3:90559326-90559345 | None:intergenic | 35.0% |
| !! | TTGCTTTTACCATGTGCAAT+AGG | - | chr6_3:90559327-90559346 | None:intergenic | 35.0% |
| AAAGCAAACACATAGAAACC+AGG | + | chr6_3:90559340-90559359 | Msa0964180:intron | 35.0% | |
| TCTTCACTAAACCTGTGAAA+TGG | + | chr6_3:90559442-90559461 | Msa0964180:intron | 35.0% | |
| CTTCACTAAACCTGTGAAAT+GGG | + | chr6_3:90559443-90559462 | Msa0964180:intron | 35.0% | |
| TCTTCTAAGCTTCAGAAACT+GGG | - | chr6_3:90559469-90559488 | None:intergenic | 35.0% | |
| TGTATGCTTTCCTACATGTT+AGG | + | chr6_3:90559556-90559575 | Msa0964180:intron | 35.0% | |
| GTATGCTTTCCTACATGTTA+GGG | + | chr6_3:90559557-90559576 | Msa0964180:intron | 35.0% | |
| GTAACAAAACCCTAACATGT+AGG | - | chr6_3:90559569-90559588 | None:intergenic | 35.0% | |
| !!! | CATGTTAGGGTTTTGTTACT+TGG | + | chr6_3:90559570-90559589 | Msa0964180:intron | 35.0% |
| AACAGTGTTGTATGTGAAGT+TGG | - | chr6_3:90559827-90559846 | None:intergenic | 35.0% | |
| AACATACCACTGAAATGTTG+GGG | - | chr6_3:90559853-90559872 | None:intergenic | 35.0% | |
| AAATAATGTGTGCGTCTTCA+CGG | + | chr6_3:90559977-90559996 | Msa0964180:intron | 35.0% | |
| CATGAACAAACACTTCCAAA+TGG | - | chr6_3:90560045-90560064 | None:intergenic | 35.0% | |
| ATGATTTCTTCTACTATCGC+AGG | + | chr6_3:90560066-90560085 | Msa0964180:intron | 35.0% | |
| GGGAAAATGAAAATTATCGC+AGG | + | chr6_3:90560108-90560127 | Msa0964180:intron | 35.0% | |
| GTAATCAAACTTACATTGGC+AGG | - | chr6_3:90560425-90560444 | None:intergenic | 35.0% | |
| ! | AAAATCTTAACAGGAAGTGC+AGG | + | chr6_3:90560656-90560675 | Msa0964180:intron | 35.0% |
| TTAAGAATGCTTCGATGTCT+TGG | - | chr6_3:90560769-90560788 | None:intergenic | 35.0% | |
| ! | TAGTTTGACTTCGAAGTTGT+TGG | - | chr6_3:90560856-90560875 | None:intergenic | 35.0% |
| AACAACTTCGAAGTCAAACT+AGG | + | chr6_3:90560855-90560874 | Msa0964180:intron | 35.0% | |
| TCAATATCTTCACAGCTACA+AGG | - | chr6_3:90560929-90560948 | None:intergenic | 35.0% | |
| ATTAATGTTGTTGCCCTTCT+TGG | + | chr6_3:90561014-90561033 | Msa0964180:intron | 35.0% | |
| CGTCAAAACAAAATCCAAGA+AGG | - | chr6_3:90561031-90561050 | None:intergenic | 35.0% | |
| ! | TGTCCAAGGATATCAGATTT+TGG | + | chr6_3:90561271-90561290 | Msa0964180:intron | 35.0% |
| AGTCCAAAATCTGATATCCT+TGG | - | chr6_3:90561277-90561296 | None:intergenic | 35.0% | |
| !! | GAAAGCATTATTTCGATGTC+AGG | + | chr6_3:90561319-90561338 | Msa0964180:intron | 35.0% |
| AAGTTTCTATTCCACAACTC+AGG | - | chr6_3:90561373-90561392 | None:intergenic | 35.0% | |
| GAGTTGTGGAATAGAAACTT+TGG | + | chr6_3:90561373-90561392 | Msa0964180:intron | 35.0% | |
| TTGTGGAATAGAAACTTTGG+AGG | + | chr6_3:90561376-90561395 | Msa0964180:intron | 35.0% | |
| TAGTTACGGAATGATGTTGT+TGG | + | chr6_3:90561423-90561442 | Msa0964180:intron | 35.0% | |
| GTGAGAAATACTTTCCTGAT+TGG | + | chr6_3:90561494-90561513 | Msa0964180:intron | 35.0% | |
| TTCCTGATTGGGTATAGAAA+AGG | + | chr6_3:90561506-90561525 | Msa0964180:intron | 35.0% | |
| ! | AACCTTTTCTATACCCAATC+AGG | - | chr6_3:90561511-90561530 | None:intergenic | 35.0% |
| GAATGACCATAGTAGGATTA+TGG | + | chr6_3:90561593-90561612 | Msa0964180:intron | 35.0% | |
| AATGCACCATAATCCTACTA+TGG | - | chr6_3:90561602-90561621 | None:intergenic | 35.0% | |
| TCAATAACTCTACTCATTGC+AGG | - | chr6_3:90561646-90561665 | None:intergenic | 35.0% | |
| GGAGAAGAAAGAATAGGTTT+GGG | - | chr6_3:90561706-90561725 | None:intergenic | 35.0% | |
| !!! | GATTTTGGTAGTGATCTAGT+GGG | - | chr6_3:90561727-90561746 | None:intergenic | 35.0% |
| CATGAGGGAAAATACTTGTG+TGG | + | chr6_3:90553771-90553790 | Msa0964180:intron | 40.0% | |
| GAAAATACTTGTGTGGACCA+GGG | + | chr6_3:90553778-90553797 | Msa0964180:intron | 40.0% | |
| TGACCACATACAATGGGATT+TGG | - | chr6_3:90553805-90553824 | None:intergenic | 40.0% | |
| TGGTTGTGACCACATACAAT+GGG | - | chr6_3:90553811-90553830 | None:intergenic | 40.0% | |
| TTGGTTGTGACCACATACAA+TGG | - | chr6_3:90553812-90553831 | None:intergenic | 40.0% | |
| TGTGGTCACAACCAAAGAAA+TGG | + | chr6_3:90553817-90553836 | Msa0964180:intron | 40.0% | |
| GTGGTCACAACCAAAGAAAT+GGG | + | chr6_3:90553818-90553837 | Msa0964180:intron | 40.0% | |
| TCTCTTCTCTCCCATTTCTT+TGG | - | chr6_3:90553831-90553850 | None:intergenic | 40.0% | |
| ATGCAAGAGAAAGACTTGTG+TGG | - | chr6_3:90553942-90553961 | None:intergenic | 40.0% | |
| CATGAGACATATTGAAGTGC+CGG | + | chr6_3:90553959-90553978 | Msa0964180:intron | 40.0% | |
| CTTTATCTCTATGTCTCTGG+AGG | + | chr6_3:90554389-90554408 | Msa0964180:intron | 40.0% | |
| ! | CGTTTTACCATCTCCAATCA+TGG | - | chr6_3:90554892-90554911 | None:intergenic | 40.0% |
| TGTACGCTTTCCTACATGTT+AGG | + | chr6_3:90555083-90555102 | Msa0964180:intron | 40.0% | |
| GTACGCTTTCCTACATGTTA+GGG | + | chr6_3:90555084-90555103 | Msa0964180:intron | 40.0% | |
| GTAACAAAGCCCTAACATGT+AGG | - | chr6_3:90555096-90555115 | None:intergenic | 40.0% | |
| !! | CATGTTAGGGCTTTGTTACT+TGG | + | chr6_3:90555097-90555116 | Msa0964180:intron | 40.0% |
| CTTGATACGCAAGTAACACA+AGG | + | chr6_3:90555181-90555200 | Msa0964180:intron | 40.0% | |
| AACAGTGTTGTATGTGAGGT+TGG | - | chr6_3:90555354-90555373 | None:intergenic | 40.0% | |
| CACTGTTATACCCCAACAAT+TGG | + | chr6_3:90555367-90555386 | Msa0964180:intron | 40.0% | |
| ! | GCTCTAGATACCAATTGTTG+GGG | - | chr6_3:90555380-90555399 | None:intergenic | 40.0% |
| GATCAACCATGAATTCCAAC+GGG | + | chr6_3:90555420-90555439 | Msa0964180:intron | 40.0% | |
| ! | TGAACATCAGTGGGATTTTC+TGG | - | chr6_3:90555572-90555591 | None:intergenic | 40.0% |
| AAAATCCCACTGATGTTCAG+AGG | + | chr6_3:90555573-90555592 | Msa0964180:intron | 40.0% | |
| AGCCAAGAAGAAAGATTGCA+AGG | + | chr6_3:90555610-90555629 | Msa0964180:intron | 40.0% | |
| AGCCTTGCAATCTTTCTTCT+TGG | - | chr6_3:90555615-90555634 | None:intergenic | 40.0% | |
| ! | TCATCAATGCGTTGACAACA+AGG | + | chr6_3:90555646-90555665 | Msa0964180:intron | 40.0% |
| TGCTGATGCAGAAAGTTCAA+AGG | + | chr6_3:90555682-90555701 | Msa0964180:intron | 40.0% | |
| TGATGCAGAAAGTTCAAAGG+AGG | + | chr6_3:90555685-90555704 | Msa0964180:intron | 40.0% | |
| ! | AGAAAGTTCAAAGGAGGCAT+GGG | + | chr6_3:90555691-90555710 | Msa0964180:intron | 40.0% |
| CAGTTATGGAGAAGATTCTG+AGG | + | chr6_3:90555894-90555913 | Msa0964180:intron | 40.0% | |
| CCCATCTCAATTTGATCACT+TGG | + | chr6_3:90555922-90555941 | Msa0964180:intron | 40.0% | |
| CTTCACTTCATTCAGATCCT+TGG | - | chr6_3:90555966-90555985 | None:intergenic | 40.0% | |
| GCTCATGAGATGAAGATAAC+TGG | + | chr6_3:90556013-90556032 | Msa0964180:intron | 40.0% | |
| GAAGATAACTGGTAGAAAGG+TGG | + | chr6_3:90556024-90556043 | Msa0964180:intron | 40.0% | |
| TAGAAAGGTGGAGAAAGATG+AGG | + | chr6_3:90556036-90556055 | Msa0964180:intron | 40.0% | |
| GCTCCATTCTTAGAAGATTC+AGG | - | chr6_3:90556157-90556176 | None:intergenic | 40.0% | |
| GACATTATGCTTCTGAATGC+TGG | + | chr6_3:90556248-90556267 | Msa0964180:intron | 40.0% | |
| CAAAGAGCAAGAAGCTAATG+TGG | + | chr6_3:90556297-90556316 | Msa0964180:intron | 40.0% | |
| CAGAAGCAGTATCAGATACT+TGG | + | chr6_3:90556386-90556405 | Msa0964180:intron | 40.0% | |
| ACATGACTGGTAAGAAGGAA+TGG | + | chr6_3:90556434-90556453 | Msa0964180:intron | 40.0% | |
| CAAGAAAACCAGTGTGAGAT+TGG | + | chr6_3:90556477-90556496 | Msa0964180:intron | 40.0% | |
| ! | TGCAGAAGTATGAAAGCAGA+AGG | + | chr6_3:90556505-90556524 | Msa0964180:intron | 40.0% |
| GTGATCATACAAGGAAGTGA+TGG | + | chr6_3:90556538-90556557 | Msa0964180:intron | 40.0% | |
| ATGAGATTGCACTTCATTCC+AGG | - | chr6_3:90556598-90556617 | None:intergenic | 40.0% | |
| AAGTGCAATCTCATGAGTGT+AGG | + | chr6_3:90556604-90556623 | Msa0964180:intron | 40.0% | |
| AATCTGAACTCTGGCATAGA+AGG | + | chr6_3:90556797-90556816 | Msa0964180:intron | 40.0% | |
| GGTATGGACACTTGAACTAT+AGG | + | chr6_3:90556818-90556837 | Msa0964180:intron | 40.0% | |
| ! | CATATGCTGCATGACTTTTC+AGG | - | chr6_3:90556901-90556920 | None:intergenic | 40.0% |
| GTGGTGCATTCAGATATATG+TGG | + | chr6_3:90556991-90557010 | Msa0964180:intron | 40.0% | |
| ATGCGTATTCAAGGATGTTG+TGG | + | chr6_3:90557067-90557086 | Msa0964180:intron | 40.0% | |
| ! | GATTCTAAGAACTGATGGAG+GGG | + | chr6_3:90557179-90557198 | Msa0964180:intron | 40.0% |
| ! | ATTCTAAGAACTGATGGAGG+GGG | + | chr6_3:90557180-90557199 | Msa0964180:intron | 40.0% |
| ! | CCATTATGTTGAGGAGTGTA+GGG | - | chr6_3:90557273-90557292 | None:intergenic | 40.0% |
| ! | TCCATTATGTTGAGGAGTGT+AGG | - | chr6_3:90557274-90557293 | None:intergenic | 40.0% |
| TCAGCAAGTCCATTATGTTG+AGG | - | chr6_3:90557282-90557301 | None:intergenic | 40.0% | |
| !! | AACATAATGGACTTGCTGAG+AGG | + | chr6_3:90557283-90557302 | Msa0964180:intron | 40.0% |
| AGAAGCTTCCTCATGAGTTT+CGG | + | chr6_3:90557352-90557371 | Msa0964180:intron | 40.0% | |
| GTGTCCTACTAAGAAGATGA+AGG | + | chr6_3:90557413-90557432 | Msa0964180:intron | 40.0% | |
| ACCATCAATCAGTCACTTGA+AGG | + | chr6_3:90557470-90557489 | Msa0964180:intron | 40.0% | |
| ACCTTCAAGTGACTGATTGA+TGG | - | chr6_3:90557474-90557493 | None:intergenic | 40.0% | |
| !! | AACTTCTTCCTTCTAGAGTC+AGG | - | chr6_3:90557525-90557544 | None:intergenic | 40.0% |
| ! | CTCTAGAAGGAAGAAGTTAG+AGG | + | chr6_3:90557527-90557546 | Msa0964180:intron | 40.0% |
| ATCATAACACTGGAGCATAC+AGG | + | chr6_3:90557580-90557599 | Msa0964180:intron | 40.0% | |
| TCATCTGTAATGAGTTCGTC+AGG | - | chr6_3:90557738-90557757 | None:intergenic | 40.0% | |
| ACAAATCCCAAGAAGACTAC+AGG | + | chr6_3:90557824-90557843 | Msa0964180:intron | 40.0% | |
| GATGATGAAGTGAATCCAGA+TGG | + | chr6_3:90557864-90557883 | Msa0964180:intron | 40.0% | |
| ! | CTGCTTTGAGTGATGAAAAC+TGG | + | chr6_3:90557940-90557959 | Msa0964180:intron | 40.0% |
| AAACTGGAAAGAAGCTATGC+AGG | + | chr6_3:90557956-90557975 | Msa0964180:intron | 40.0% | |
| ! | GATTTGGTCAAGTTACCTGA+TGG | + | chr6_3:90558014-90558033 | Msa0964180:intron | 40.0% |
| AAGCTGAAATTGAACCCTGA+AGG | + | chr6_3:90558068-90558087 | Msa0964180:intron | 40.0% | |
| AAAACCTCTAGCTACAAGTC+TGG | - | chr6_3:90558114-90558133 | None:intergenic | 40.0% | |
| ! | AAGTGTTTTCACCAGTTGCT+AGG | + | chr6_3:90558162-90558181 | Msa0964180:intron | 40.0% |
| ATAGTTTCATGCCTAGCAAC+TGG | - | chr6_3:90558176-90558195 | None:intergenic | 40.0% | |
| TTGCTAGGCATGAAACTATC+AGG | + | chr6_3:90558177-90558196 | Msa0964180:intron | 40.0% | |
| CAGTAGCAACCAGTAAATCT+TGG | + | chr6_3:90558210-90558229 | Msa0964180:intron | 40.0% | |
| AAATCCTGGCCAAGATTTAC+TGG | - | chr6_3:90558222-90558241 | None:intergenic | 40.0% | |
| ! | GAAAAGCTGATTTCACATCC+AGG | - | chr6_3:90558300-90558319 | None:intergenic | 40.0% |
| !! | CCTTTGATAATGAATCCTGG+AGG | - | chr6_3:90558361-90558380 | None:intergenic | 40.0% |
| CCTCCAGGATTCATTATCAA+AGG | + | chr6_3:90558358-90558377 | Msa0964180:intron | 40.0% | |
| ! | CAGGGTGTTCAAACTAAACA+AGG | + | chr6_3:90558390-90558409 | Msa0964180:intron | 40.0% |
| ! | GGCTTTATATGGTTTGAAGC+AGG | + | chr6_3:90558411-90558430 | Msa0964180:intron | 40.0% |
| ! | ATTCTTTTGTTCCAGGCTCT+GGG | - | chr6_3:90558439-90558458 | None:intergenic | 40.0% |
| ! | AATTCTTTTGTTCCAGGCTC+TGG | - | chr6_3:90558440-90558459 | None:intergenic | 40.0% |
| ! | TGTTGCTTCCAGTTACCAAA+AGG | - | chr6_3:90558573-90558592 | None:intergenic | 40.0% |
| ! | GGAAAGCTTGCTTACTTTCT+GGG | + | chr6_3:90558652-90558671 | Msa0964180:intron | 40.0% |
| CTGTTGATCCAACTATGTTC+AGG | + | chr6_3:90558827-90558846 | Msa0964180:intron | 40.0% | |
| ACTCAGTTGGAATTGTCAGT+AGG | + | chr6_3:90558902-90558921 | Msa0964180:intron | 40.0% | |
| !! | TTCTTTGAGGTCCATGATAC+AGG | - | chr6_3:90559135-90559154 | None:intergenic | 40.0% |
| CACAATTGACTGCTTCTTTG+AGG | - | chr6_3:90559148-90559167 | None:intergenic | 40.0% | |
| CTCAAAGAAGCAGTCAATTG+TGG | + | chr6_3:90559146-90559165 | Msa0964180:intron | 40.0% | |
| !! | CTGGTTGAGGAATATTTTGG+AGG | + | chr6_3:90559227-90559246 | Msa0964180:intron | 40.0% |
| GCTAAAAACCCTATTGCACA+TGG | + | chr6_3:90559315-90559334 | Msa0964180:intron | 40.0% | |
| TGATCTTGCATCTGTTCACT+TGG | - | chr6_3:90559383-90559402 | None:intergenic | 40.0% | |
| CTCTTCTAAGCTTCAGAAAC+TGG | - | chr6_3:90559470-90559489 | None:intergenic | 40.0% | |
| CTTGATACGCAAGTAACACA+AGG | + | chr6_3:90555181-90555200 | Msa0964180:intron | 40.0% | |
| !! | AGTTGGTGAAGGTTTCTTTG+TGG | - | chr6_3:90559810-90559829 | None:intergenic | 40.0% |
| !! | GTTGTATGTGAAGTTGGTGA+AGG | - | chr6_3:90559821-90559840 | None:intergenic | 40.0% |
| GTTATACCCCAACATTTCAG+TGG | + | chr6_3:90559844-90559863 | Msa0964180:intron | 40.0% | |
| ACTTCCAAATGGTACAGTTC+GGG | - | chr6_3:90560034-90560053 | None:intergenic | 40.0% | |
| CACTTCCAAATGGTACAGTT+CGG | - | chr6_3:90560035-90560054 | None:intergenic | 40.0% | |
| TTCTTCTACTATCGCAGGTA+AGG | + | chr6_3:90560071-90560090 | Msa0964180:intron | 40.0% | |
| ATAACAGGAAGTAACCCACT+TGG | + | chr6_3:90560525-90560544 | Msa0964180:intron | 40.0% | |
| TAACAGGAAGTAACCCACTT+GGG | + | chr6_3:90560526-90560545 | Msa0964180:intron | 40.0% | |
| AGTGCAGGTGCAACATTTAT+AGG | + | chr6_3:90560671-90560690 | Msa0964180:intron | 40.0% | |
| TTCGAAGTCAAACTAGGACA+AGG | + | chr6_3:90560861-90560880 | Msa0964180:intron | 40.0% | |
| AAACTAGGACAAGGTGGTTA+TGG | + | chr6_3:90560870-90560889 | Msa0964180:intron | 40.0% | |
| ATATCTTCACAGCTACAAGG+CGG | - | chr6_3:90560926-90560945 | None:intergenic | 40.0% | |
| CTCCCAACTTAGAGATTGAT+AGG | - | chr6_3:90561132-90561151 | None:intergenic | 40.0% | |
| ATGTTGTTGGAAATGATCGG+AGG | + | chr6_3:90561436-90561455 | Msa0964180:intron | 40.0% | |
| ! | CTCACTTGTATGACTTGCAT+TGG | - | chr6_3:90561479-90561498 | None:intergenic | 40.0% |
| CTTTGCGATATCATCTTCTG+TGG | - | chr6_3:90561572-90561591 | None:intergenic | 40.0% | |
| GCAAAGAGAATGACCATAGT+AGG | + | chr6_3:90561586-90561605 | Msa0964180:intron | 40.0% | |
| CTCATTGCAGGTCTATCATT+TGG | - | chr6_3:90561634-90561653 | None:intergenic | 40.0% | |
| GAAGAAAGAATAGGTTTGGG+TGG | - | chr6_3:90561703-90561722 | None:intergenic | 40.0% | |
| GGGAGAAGAAAGAATAGGTT+TGG | - | chr6_3:90561707-90561726 | None:intergenic | 40.0% | |
| CTAGTGGGAGAAGAAAGAAT+AGG | - | chr6_3:90561712-90561731 | None:intergenic | 40.0% | |
| !!! | CGATTTTGGTAGTGATCTAG+TGG | - | chr6_3:90561728-90561747 | None:intergenic | 40.0% |
| GGAAAATACTTGTGTGGACC+AGG | + | chr6_3:90553777-90553796 | Msa0964180:intron | 45.0% | |
| ! | ATACAATGGGATTTGGTCCC+TGG | - | chr6_3:90553798-90553817 | None:intergenic | 45.0% |
| GGACCAAATCCCATTGTATG+TGG | + | chr6_3:90553799-90553818 | Msa0964180:intron | 45.0% | |
| TGTGACCAAACCCAATTGTG+TGG | + | chr6_3:90553909-90553928 | Msa0964180:intron | 45.0% | |
| !! | AGACATATTGAAGTGCCGGT+AGG | + | chr6_3:90553963-90553982 | Msa0964180:intron | 45.0% |
| CAACGTGGTGTTCTTGAAAG+TGG | + | chr6_3:90554026-90554045 | Msa0964180:intron | 45.0% | |
| AATCATGGAGTCACCATCTC+CGG | - | chr6_3:90554877-90554896 | None:intergenic | 45.0% | |
| GGAGATGGTAAAACGGTGAT+CGG | + | chr6_3:90554897-90554916 | Msa0964180:intron | 45.0% | |
| TTGGAGACGAAGCTTCTGTT+TGG | + | chr6_3:90554936-90554955 | Msa0964180:intron | 45.0% | |
| TGGAGACGAAGCTTCTGTTT+GGG | + | chr6_3:90554937-90554956 | Msa0964180:intron | 45.0% | |
| !! | GGTTGGTGAAGGTTTCTTTG+TGG | - | chr6_3:90555337-90555356 | None:intergenic | 45.0% |
| !! | GTTGTATGTGAGGTTGGTGA+AGG | - | chr6_3:90555348-90555367 | None:intergenic | 45.0% |
| !! | TCAGTGGGATTTTCTGGAAG+TGG | - | chr6_3:90555566-90555585 | None:intergenic | 45.0% |
| GTGTTCCTCTGAACATCAGT+GGG | - | chr6_3:90555581-90555600 | None:intergenic | 45.0% | |
| TGTGTTCCTCTGAACATCAG+TGG | - | chr6_3:90555582-90555601 | None:intergenic | 45.0% | |
| CAGAAAGTTCAAAGGAGGCA+TGG | + | chr6_3:90555690-90555709 | Msa0964180:intron | 45.0% | |
| ! | AAAGGAGGCATGGGATACAT+TGG | + | chr6_3:90555700-90555719 | Msa0964180:intron | 45.0% |
| ACTGGTAAGAAGGAATGGCT+GGG | + | chr6_3:90556439-90556458 | Msa0964180:intron | 45.0% | |
| !! | GAAGAGGTACTCTATGTTCC+TGG | + | chr6_3:90556577-90556596 | Msa0964180:intron | 45.0% |
| CTGCTCCTTATTCACTATGC+TGG | - | chr6_3:90556746-90556765 | None:intergenic | 45.0% | |
| GAACTCTGGCATAGAAGGTA+TGG | + | chr6_3:90556802-90556821 | Msa0964180:intron | 45.0% | |
| CCCTACACTCCTCAACATAA+TGG | + | chr6_3:90557270-90557289 | Msa0964180:intron | 45.0% | |
| ! | TATGGCCAGAAGTATGCTGA+AGG | + | chr6_3:90557326-90557345 | Msa0964180:intron | 45.0% |
| CTTCTCCTTCAGCATACTTC+TGG | - | chr6_3:90557334-90557353 | None:intergenic | 45.0% | |
| GAAGCTTCCTCATGAGTTTC+GGG | + | chr6_3:90557353-90557372 | Msa0964180:intron | 45.0% | |
| AAGCTTCCTCATGAGTTTCG+GGG | + | chr6_3:90557354-90557373 | Msa0964180:intron | 45.0% | |
| ! | GTACCTGAAGAGATTTGGTC+AGG | + | chr6_3:90557441-90557460 | Msa0964180:intron | 45.0% |
| CTTCCTGACCAAATCTCTTC+AGG | - | chr6_3:90557447-90557466 | None:intergenic | 45.0% | |
| AGCATGTTCCTGACTCTAGA+AGG | + | chr6_3:90557514-90557533 | Msa0964180:intron | 45.0% | |
| ! | GGGATTTGTCTGTTTCTCTG+TGG | - | chr6_3:90557813-90557832 | None:intergenic | 45.0% |
| CACAGTCCTGTAGTCTTCTT+GGG | - | chr6_3:90557833-90557852 | None:intergenic | 45.0% | |
| TCACAGTCCTGTAGTCTTCT+TGG | - | chr6_3:90557834-90557853 | None:intergenic | 45.0% | |
| CTACAGGACTGTGAAGTAAC+TGG | + | chr6_3:90557840-90557859 | Msa0964180:intron | 45.0% | |
| AGTGAATCCAGATGGTGAAC+TGG | + | chr6_3:90557872-90557891 | Msa0964180:intron | 45.0% | |
| AAGTGTACCAGTTCACCATC+TGG | - | chr6_3:90557882-90557901 | None:intergenic | 45.0% | |
| ATTGAACCCTGAAGGCAAAG+TGG | + | chr6_3:90558076-90558095 | Msa0964180:intron | 45.0% | |
| GCTTTACCACTTTGCCTTCA+GGG | - | chr6_3:90558085-90558104 | None:intergenic | 45.0% | |
| TGCTTTACCACTTTGCCTTC+AGG | - | chr6_3:90558086-90558105 | None:intergenic | 45.0% | |
| AGGCAAAGTGGTAAAGCACA+AGG | + | chr6_3:90558088-90558107 | Msa0964180:intron | 45.0% | |
| ! | AGCTAGAGGTTTTCTGCAGA+AGG | + | chr6_3:90558121-90558140 | Msa0964180:intron | 45.0% |
| ! | TAGAGGTTTTCTGCAGAAGG+AGG | + | chr6_3:90558124-90558143 | Msa0964180:intron | 45.0% |
| ! | AGAGGTTTTCTGCAGAAGGA+GGG | + | chr6_3:90558125-90558144 | Msa0964180:intron | 45.0% |
| !! | CTTGGCCAGGATTTGCTAAA+TGG | + | chr6_3:90558228-90558247 | Msa0964180:intron | 45.0% |
| GTGTATGTTACACAACCTCC+AGG | + | chr6_3:90558343-90558362 | Msa0964180:intron | 45.0% | |
| !! | GTGGATGACCTTTTGGTAAC+TGG | + | chr6_3:90558562-90558581 | Msa0964180:intron | 45.0% |
| ! | GGGAAAGCTTGCTTACTTTC+TGG | + | chr6_3:90558651-90558670 | Msa0964180:intron | 45.0% |
| ! | GCTTGCTTACTTTCTGGGAA+TGG | + | chr6_3:90558657-90558676 | Msa0964180:intron | 45.0% |
| CCAACTGAGTAGCTTATGTC+TGG | - | chr6_3:90558892-90558911 | None:intergenic | 45.0% | |
| CCAGACATAAGCTACTCAGT+TGG | + | chr6_3:90558889-90558908 | Msa0964180:intron | 45.0% | |
| ACTAAGCAACTCAGCATGAC+AGG | + | chr6_3:90559030-90559049 | Msa0964180:intron | 45.0% | |
| GGTGTGGGGATAAGATAGAT+AGG | + | chr6_3:90559070-90559089 | Msa0964180:intron | 45.0% | |
| GTGGGGATAAGATAGATAGG+AGG | + | chr6_3:90559073-90559092 | Msa0964180:intron | 45.0% | |
| !! | ATAGATAGGAGGAGCACTAC+AGG | + | chr6_3:90559084-90559103 | Msa0964180:intron | 45.0% |
| TGTGAGGCAGAATATGTTGC+AGG | + | chr6_3:90559180-90559199 | Msa0964180:intron | 45.0% | |
| CTTGTCAAGCAAACTGGTTG+AGG | + | chr6_3:90559214-90559233 | Msa0964180:intron | 45.0% | |
| AAACCAGGTTCCACTACTTG+AGG | + | chr6_3:90559355-90559374 | Msa0964180:intron | 45.0% | |
| AACCAGGTTCCACTACTTGA+GGG | + | chr6_3:90559356-90559375 | Msa0964180:intron | 45.0% | |
| ! | TCTGAAGCTTAGAAGAGAGC+TGG | + | chr6_3:90559473-90559492 | Msa0964180:intron | 45.0% |
| CTGAAGCTTAGAAGAGAGCT+GGG | + | chr6_3:90559474-90559493 | Msa0964180:intron | 45.0% | |
| ! | CTGGGTGTGTTTTGCTTTGA+TGG | + | chr6_3:90559492-90559511 | Msa0964180:intron | 45.0% |
| GTAACCCGAACTGTACCATT+TGG | + | chr6_3:90560027-90560046 | Msa0964180:intron | 45.0% | |
| CAAACTTACATTGGCAGGCA+AGG | - | chr6_3:90560420-90560439 | None:intergenic | 45.0% | |
| ! | ATTCTCTCCGGTGCCAATTT+GGG | + | chr6_3:90560610-90560629 | Msa0964180:intron | 45.0% |
| GCTAAATAGCCCACCCAAAT+TGG | - | chr6_3:90560626-90560645 | None:intergenic | 45.0% | |
| GAAGTCAAACTAGGACAAGG+TGG | + | chr6_3:90560864-90560883 | Msa0964180:intron | 45.0% | |
| TAAAGGGATAGCTCGAGAGT+TGG | + | chr6_3:90561169-90561188 | Msa0964180:intron | 45.0% | |
| ! | AGAGTTGGAGTACCCACATA+GGG | + | chr6_3:90561184-90561203 | Msa0964180:intron | 45.0% |
| GAGTACTACATCCCCTATGT+GGG | - | chr6_3:90561199-90561218 | None:intergenic | 45.0% | |
| ATTTCGATGTCAGGTGCTAG+AGG | + | chr6_3:90561328-90561347 | Msa0964180:intron | 45.0% | |
| TCAGGTGCTAGAGGAACAAT+GGG | + | chr6_3:90561337-90561356 | Msa0964180:intron | 45.0% | |
| GATATGTAGCTCCTGAGTTG+TGG | + | chr6_3:90561359-90561378 | Msa0964180:intron | 45.0% | |
| TGTTGGAAATGATCGGAGGA+AGG | + | chr6_3:90561440-90561459 | Msa0964180:intron | 45.0% | |
| !!! | AATTTTAAATAAAAATAATC+TGG | - | chr6_3:90554556-90554575 | None:intergenic | 5.0% |
| CAGGACCACACAATTGGGTT+TGG | - | chr6_3:90553917-90553936 | None:intergenic | 50.0% | |
| CAAACCCAATTGTGTGGTCC+TGG | + | chr6_3:90553915-90553934 | Msa0964180:intron | 50.0% | |
| TGGACCAGGACCACACAATT+GGG | - | chr6_3:90553922-90553941 | None:intergenic | 50.0% | |
| GAGAAAGACTTGTGTGGACC+AGG | - | chr6_3:90553936-90553955 | None:intergenic | 50.0% | |
| AGTGAATCGGAGATCGGACA+TGG | + | chr6_3:90554847-90554866 | Msa0964180:intron | 50.0% | |
| GGAGATGGTGACTCCATGAT+TGG | + | chr6_3:90554876-90554895 | Msa0964180:intron | 50.0% | |
| GGTGACTCCATGATTGGAGA+TGG | + | chr6_3:90554882-90554901 | Msa0964180:intron | 50.0% | |
| GGTAAAACGGTGATCGGAGA+TGG | + | chr6_3:90554903-90554922 | Msa0964180:intron | 50.0% | |
| CGGAGATGGTGAATGGTGAT+TGG | + | chr6_3:90554917-90554936 | Msa0964180:intron | 50.0% | |
| ATGCGCAGCAATATTCCCGT+TGG | - | chr6_3:90555438-90555457 | None:intergenic | 50.0% | |
| GCGCATTTGCCAGTTCTTGA+TGG | + | chr6_3:90555452-90555471 | Msa0964180:intron | 50.0% | |
| GGTGGAGAAAGATGAGGAAC+AGG | + | chr6_3:90556042-90556061 | Msa0964180:intron | 50.0% | |
| GGGTGCTCAAATCACATGAC+TGG | + | chr6_3:90556421-90556440 | Msa0964180:intron | 50.0% | |
| GACTGGTAAGAAGGAATGGC+TGG | + | chr6_3:90556438-90556457 | Msa0964180:intron | 50.0% | |
| GCAATCAGCCAATCTCACAC+TGG | - | chr6_3:90556488-90556507 | None:intergenic | 50.0% | |
| GTAGGCCAGCTCATAGAGAA+AGG | + | chr6_3:90556622-90556641 | Msa0964180:intron | 50.0% | |
| TGTAGGGAGCTGTGACTTCA+TGG | - | chr6_3:90557257-90557276 | None:intergenic | 50.0% | |
| TGTGGTCTAGCTGTAGTGGT+TGG | - | chr6_3:90557795-90557814 | None:intergenic | 50.0% | |
| TCTCTGTGGTCTAGCTGTAG+TGG | - | chr6_3:90557799-90557818 | None:intergenic | 50.0% | |
| AAGGCCAGACTTGTAGCTAG+AGG | + | chr6_3:90558107-90558126 | Msa0964180:intron | 50.0% | |
| GCAACCAGTAAATCTTGGCC+AGG | + | chr6_3:90558215-90558234 | Msa0964180:intron | 50.0% | |
| TACTCTGATGCAGACTGGTG+TGG | + | chr6_3:90559054-90559073 | Msa0964180:intron | 50.0% | |
| ACTCTGATGCAGACTGGTGT+GGG | + | chr6_3:90559055-90559074 | Msa0964180:intron | 50.0% | |
| CAGCAGCTTGTCAAGCAAAC+TGG | + | chr6_3:90559208-90559227 | Msa0964180:intron | 50.0% | |
| TCACTTGGTCCCTCAAGTAG+TGG | - | chr6_3:90559368-90559387 | None:intergenic | 50.0% | |
| AGAAACTGGGCCCATTTCAC+AGG | - | chr6_3:90559456-90559475 | None:intergenic | 50.0% | |
| GTAAGGAGTTGAGCTGGCAA+GGG | + | chr6_3:90560088-90560107 | Msa0964180:intron | 50.0% | |
| GCAGGCAAGGCATGTACATA+AGG | - | chr6_3:90560407-90560426 | None:intergenic | 50.0% | |
| AGGAAGTAACCCACTTGGGT+TGG | + | chr6_3:90560530-90560549 | Msa0964180:intron | 50.0% | |
| !! | GTGGTATTGGCTTGGGTCTT+GGG | + | chr6_3:90560557-90560576 | Msa0964180:intron | 50.0% |
| GAATCGAACCTGAGACCTTG+CGG | - | chr6_3:90560594-90560613 | None:intergenic | 50.0% | |
| GTCTCAGGTTCGATTCTCTC+CGG | + | chr6_3:90560598-90560617 | Msa0964180:intron | 50.0% | |
| ! | GATTCTCTCCGGTGCCAATT+TGG | + | chr6_3:90560609-90560628 | Msa0964180:intron | 50.0% |
| ! | GAGAGTTGGAGTACCCACAT+AGG | + | chr6_3:90561183-90561202 | Msa0964180:intron | 50.0% |
| ! | GAGTTGGAGTACCCACATAG+GGG | + | chr6_3:90561185-90561204 | Msa0964180:intron | 50.0% |
| CGAGTACTACATCCCCTATG+TGG | - | chr6_3:90561200-90561219 | None:intergenic | 50.0% | |
| GTCAGGTGCTAGAGGAACAA+TGG | + | chr6_3:90561336-90561355 | Msa0964180:intron | 50.0% | |
| GTGGACCAGGACCACACAAT+TGG | - | chr6_3:90553923-90553942 | None:intergenic | 55.0% | |
| GGAGATCGGACATGGTGTAC+CGG | + | chr6_3:90554855-90554874 | Msa0964180:intron | 55.0% | |
| CGGTGATCGGAGATGGTGAA+TGG | + | chr6_3:90554910-90554929 | Msa0964180:intron | 55.0% | |
| GCTTCACCCCGAAACTCATG+AGG | - | chr6_3:90557363-90557382 | None:intergenic | 55.0% | |
| ! | GTAGTGGTTGGCTCCTCATC+AGG | - | chr6_3:90557783-90557802 | None:intergenic | 55.0% |
| CAGGCTACTCTGATGCAGAC+TGG | + | chr6_3:90559049-90559068 | Msa0964180:intron | 55.0% | |
| CTCTGATGCAGACTGGTGTG+GGG | + | chr6_3:90559056-90559075 | Msa0964180:intron | 55.0% | |
| !! | TGCAGGGAGCACCTGTATCA+TGG | + | chr6_3:90559121-90559140 | Msa0964180:intron | 55.0% |
| TGTGGCTCTCTCTAGCTGTG+AGG | + | chr6_3:90559164-90559183 | Msa0964180:intron | 55.0% | |
| ! | GTCCCTCAAGTAGTGGAACC+TGG | - | chr6_3:90559361-90559380 | None:intergenic | 55.0% |
| TCGCAGGTAAGGAGTTGAGC+TGG | + | chr6_3:90560082-90560101 | Msa0964180:intron | 55.0% | |
| GGTAAGGAGTTGAGCTGGCA+AGG | + | chr6_3:90560087-90560106 | Msa0964180:intron | 55.0% | |
| !! | TTGGGTTGGCCTGGTGGTAT+TGG | + | chr6_3:90560544-90560563 | Msa0964180:intron | 55.0% |
| !! | TTGGCCTGGTGGTATTGGCT+TGG | + | chr6_3:90560549-90560568 | Msa0964180:intron | 55.0% |
| !! | TGGCCTGGTGGTATTGGCTT+GGG | + | chr6_3:90560550-90560569 | Msa0964180:intron | 55.0% |
| AGACCCAAGCCAATACCACC+AGG | - | chr6_3:90560556-90560575 | None:intergenic | 55.0% | |
| !! | GGTGGTATTGGCTTGGGTCT+TGG | + | chr6_3:90560556-90560575 | Msa0964180:intron | 55.0% |
| ! | TCTCCGGTGCCAATTTGGGT+GGG | + | chr6_3:90560614-90560633 | Msa0964180:intron | 55.0% |
| TAGCCCACCCAAATTGGCAC+CGG | - | chr6_3:90560620-90560639 | None:intergenic | 55.0% | |
| CGGACATGGTGTACCGGAGA+TGG | + | chr6_3:90554861-90554880 | Msa0964180:intron | 60.0% | |
| !! | GTAACCCACTTGGGTTGGCC+TGG | + | chr6_3:90560535-90560554 | Msa0964180:intron | 60.0% |
| ACCACCAGGCCAACCCAAGT+GGG | - | chr6_3:90560542-90560561 | None:intergenic | 60.0% | |
| TACCACCAGGCCAACCCAAG+TGG | - | chr6_3:90560543-90560562 | None:intergenic | 60.0% | |
| TCGAACCTGAGACCTTGCGG+AGG | - | chr6_3:90560591-90560610 | None:intergenic | 60.0% | |
| ! | CTCTCCGGTGCCAATTTGGG+TGG | + | chr6_3:90560613-90560632 | Msa0964180:intron | 60.0% |
| TGAAGCAGGCACCCAGAGCC+TGG | + | chr6_3:90558425-90558444 | Msa0964180:intron | 65.0% | |
| !! | ACCCACTTGGGTTGGCCTGG+TGG | + | chr6_3:90560538-90560557 | Msa0964180:intron | 65.0% |
| ! | TGGGAGTGTGCTCCTCCGCA+AGG | + | chr6_3:90560576-90560595 | Msa0964180:intron | 65.0% |
| GTGCTCCTCCGCAAGGTCTC+AGG | + | chr6_3:90560583-90560602 | Msa0964180:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_3 | gene | 90553541 | 90561833 | 90553541 | ID=Msa0964180;Name=Msa0964180 |
| chr6_3 | mRNA | 90553541 | 90561833 | 90553541 | ID=Msa0964180-mRNA-1;Parent=Msa0964180;Name=Msa0964180-mRNA-1;_AED=0.47;_eAED=0.47;_QI=0|0|0|0.66|0|0|3|0|97 |
| chr6_3 | exon | 90553541 | 90553713 | 90553541 | ID=Msa0964180-mRNA-1:exon:16278;Parent=Msa0964180-mRNA-1 |
| chr6_3 | exon | 90554046 | 90554160 | 90554046 | ID=Msa0964180-mRNA-1:exon:16279;Parent=Msa0964180-mRNA-1 |
| chr6_3 | exon | 90561828 | 90561833 | 90561828 | ID=Msa0964180-mRNA-1:exon:16280;Parent=Msa0964180-mRNA-1 |
| chr6_3 | CDS | 90553541 | 90553713 | 90553541 | ID=Msa0964180-mRNA-1:cds;Parent=Msa0964180-mRNA-1 |
| chr6_3 | CDS | 90554046 | 90554160 | 90554046 | ID=Msa0964180-mRNA-1:cds;Parent=Msa0964180-mRNA-1 |
| chr6_3 | CDS | 90561828 | 90561833 | 90561828 | ID=Msa0964180-mRNA-1:cds;Parent=Msa0964180-mRNA-1 |
| Gene Sequence |
| Protein sequence |
