Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0966110 | XP_003620948.4 | 92.276 | 479 | 22 | 4 | 9 | 474 | 14 | 490 | 0.0 | 823 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0966110 | sp|Q8GWJ4|OSB3_ARATH | 40.000 | 430 | 165 | 11 | 62 | 463 | 71 | 435 | 7.26e-82 | 263 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0071760 | Msa0966110 | 0.845147 | 4.868191e-59 | -8.615850e-47 |
| Msa0418980 | Msa0966110 | 0.817957 | 2.518160e-52 | -8.615850e-47 |
| Msa0433060 | Msa0966110 | 0.819465 | 1.145049e-52 | -8.615850e-47 |
| Msa0463820 | Msa0966110 | -0.813981 | 1.943418e-51 | -8.615850e-47 |
| Msa0524680 | Msa0966110 | 0.817088 | 3.952356e-52 | -8.615850e-47 |
| Msa0550490 | Msa0966110 | 0.829366 | 5.359793e-55 | -8.615850e-47 |
| Msa0925320 | Msa0966110 | 0.859222 | 4.802780e-63 | -8.615850e-47 |
| Msa0966110 | Msa1085850 | 0.801931 | 7.134824e-49 | -8.615850e-47 |
| Msa0966110 | Msa1118790 | 0.809835 | 1.554708e-50 | -8.615850e-47 |
| Msa0966110 | Msa1299690 | 0.804447 | 2.150883e-49 | -8.615850e-47 |
| Msa0966110 | Msa1433590 | 0.813122 | 3.002640e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0966110 | MtrunA17_Chr6g0488631 | 92.276 | 479 | 22 | 4 | 9 | 474 | 14 | 490 | 0.0 | 823 |
| Msa0966110 | MtrunA17_Chr1g0184811 | 52.459 | 61 | 27 | 1 | 406 | 464 | 248 | 308 | 2.09e-13 | 71.2 |
| Msa0966110 | MtrunA17_Chr1g0184811 | 26.244 | 221 | 153 | 3 | 42 | 262 | 84 | 294 | 8.46e-13 | 69.3 |
| Msa0966110 | MtrunA17_Chr1g0184811 | 44.118 | 68 | 36 | 1 | 335 | 400 | 248 | 315 | 3.57e-12 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0966110 | AT5G44785.1 | 40.000 | 430 | 165 | 11 | 62 | 463 | 71 | 435 | 7.38e-83 | 263 |
| Msa0966110 | AT5G44785.2 | 40.139 | 431 | 165 | 11 | 62 | 463 | 71 | 437 | 9.57e-83 | 263 |
| Msa0966110 | AT4G20010.1 | 34.746 | 354 | 166 | 6 | 48 | 394 | 74 | 369 | 5.88e-61 | 204 |
| Msa0966110 | AT4G20010.1 | 54.745 | 137 | 58 | 1 | 332 | 464 | 232 | 368 | 2.16e-44 | 160 |
| Msa0966110 | AT4G20010.2 | 34.746 | 354 | 166 | 6 | 48 | 394 | 74 | 369 | 1.22e-60 | 203 |
| Msa0966110 | AT4G20010.2 | 54.745 | 137 | 58 | 1 | 332 | 464 | 232 | 368 | 2.52e-44 | 159 |
| Msa0966110 | AT1G31010.1 | 53.957 | 139 | 61 | 2 | 246 | 384 | 208 | 343 | 1.71e-42 | 154 |
| Msa0966110 | AT1G31010.1 | 32.154 | 311 | 143 | 11 | 52 | 313 | 52 | 343 | 1.65e-32 | 127 |
| Msa0966110 | AT1G31010.1 | 50.000 | 134 | 58 | 3 | 333 | 461 | 220 | 349 | 2.59e-29 | 118 |
| Msa0966110 | AT1G47720.1 | 55.932 | 59 | 23 | 2 | 400 | 455 | 179 | 237 | 2.91e-12 | 67.4 |
Find 156 sgRNAs with CRISPR-Local
Find 446 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGATTCCTCTTGTCTTTCA+TGG | 0.185249 | 6_3:+94126749 | Msa0966110:CDS |
| GGCTTCAACGGTGGCAATTT+TGG | 0.189995 | 6_3:-94133134 | None:intergenic |
| TTTACTGTCCTTTGCTTGTT+TGG | 0.220800 | 6_3:-94132514 | None:intergenic |
| ACCTCAACAATATCAGTTTC+AGG | 0.229878 | 6_3:+94126874 | Msa0966110:CDS |
| GAAGGCTGCTTTAACTTCTA+AGG | 0.230849 | 6_3:+94127469 | Msa0966110:CDS |
| TATATCCGTAATATTCATTT+TGG | 0.238714 | 6_3:-94126411 | None:intergenic |
| CCGTTCATTAAGCTGATATT+TGG | 0.240791 | 6_3:-94133187 | None:intergenic |
| CGAAAATCCCACCACTTCTT+TGG | 0.245451 | 6_3:-94130547 | None:intergenic |
| AAGCACAAAGATACTGGTTT+AGG | 0.261216 | 6_3:+94132414 | Msa0966110:CDS |
| GTTGACGGAGTTGGCGAGTT+TGG | 0.264543 | 6_3:-94126621 | None:intergenic |
| TTTGTTTGTTTGGGTTTAAC+AGG | 0.266339 | 6_3:-94130789 | None:intergenic |
| TGCTTGAAATCGGGTCCTTT+TGG | 0.268732 | 6_3:-94133059 | None:intergenic |
| ACTTGCATTTGGGAGGGTTT+TGG | 0.271602 | 6_3:+94126439 | Msa0966110:CDS |
| TCTTGTCTTTCATGGTGATT+TGG | 0.281239 | 6_3:+94126757 | Msa0966110:CDS |
| CGCCTATTTGTCAAGTCCTT+GGG | 0.286704 | 6_3:+94130507 | Msa0966110:CDS |
| TTTATTAATGACATCCTTCC+AGG | 0.301493 | 6_3:-94130172 | None:intergenic |
| GTTTCTGCACTTTGTTGTTT+CGG | 0.308351 | 6_3:-94133155 | None:intergenic |
| GCCAACTCCGTCAACCTAAT+TGG | 0.309335 | 6_3:+94126629 | Msa0966110:CDS |
| GTTTGTTAACAGTACCAATT+AGG | 0.314891 | 6_3:-94126643 | None:intergenic |
| GGTGTCTTTGTGCTTGAAAT+CGG | 0.321172 | 6_3:-94133069 | None:intergenic |
| GATATAAAACTACTTGCATT+TGG | 0.334198 | 6_3:+94126428 | Msa0966110:CDS |
| TGCTGCAAAACCCAGCTAAA+TGG | 0.338848 | 6_3:+94132238 | Msa0966110:CDS |
| CCATCCTTGCGCTTGAAGTC+AGG | 0.339558 | 6_3:-94130690 | None:intergenic |
| TGCTGCAAAATCCAGCTAAA+TGG | 0.344950 | 6_3:+94132904 | Msa0966110:CDS |
| GGAGTAAAACTCGCCGTATT+GGG | 0.348045 | 6_3:-94126493 | None:intergenic |
| GGTTGCCGTCGGTGGAAGTT+TGG | 0.353746 | 6_3:-94126676 | None:intergenic |
| TTTGGGTTGGAATGGGATTT+CGG | 0.354684 | 6_3:-94126603 | None:intergenic |
| TTGACGGAGTTGGCGAGTTT+GGG | 0.356940 | 6_3:-94126620 | None:intergenic |
| AGCACAAAGATACTGGTTTA+GGG | 0.362526 | 6_3:+94132415 | Msa0966110:CDS |
| GATTTCAAGCACAAAGATAC+TGG | 0.362858 | 6_3:+94132408 | Msa0966110:CDS |
| AGGAGTAAAACTCGCCGTAT+TGG | 0.378745 | 6_3:-94126494 | None:intergenic |
| TTGGCGAGTTTGGGTTGGAA+TGG | 0.388117 | 6_3:-94126611 | None:intergenic |
| CGCTTGAAGTCAGGGTACTT+TGG | 0.389659 | 6_3:-94130681 | None:intergenic |
| GTGGAAGTTTGGAAGTGAAT+AGG | 0.391890 | 6_3:-94126665 | None:intergenic |
| CCGCCTATTTGTCAAGTCCT+TGG | 0.392562 | 6_3:+94130506 | Msa0966110:CDS |
| CTATTATCCCACCATTTAGC+TGG | 0.399109 | 6_3:-94132249 | None:intergenic |
| TGGCGAGTTTGGGTTGGAAT+GGG | 0.399849 | 6_3:-94126610 | None:intergenic |
| AGTCTAGATAAAACCGACTT+TGG | 0.401993 | 6_3:-94130741 | None:intergenic |
| GGTGAAGGGCTATGGCTTAG+AGG | 0.405231 | 6_3:+94133092 | Msa0966110:CDS |
| CTATTATCCCACCATTTAGC+TGG | 0.407094 | 6_3:-94132915 | None:intergenic |
| GTGTCTTTGTGCTTGAAATC+GGG | 0.407865 | 6_3:-94133068 | None:intergenic |
| TGTGGCGGCGGTGGAGTAGT+TGG | 0.408360 | 6_3:-94126537 | None:intergenic |
| ATATAAAACTACTTGCATTT+GGG | 0.409113 | 6_3:+94126429 | Msa0966110:CDS |
| GGCTTAGAGGTTCACCAAGT+TGG | 0.411869 | 6_3:+94133105 | Msa0966110:CDS |
| GCTCAGAGATTCACCAAGTT+GGG | 0.411950 | 6_3:+94132443 | Msa0966110:CDS |
| CTTTGTTGTTTCGGCTTCAA+CGG | 0.413639 | 6_3:-94133146 | None:intergenic |
| TGAGCATTATTATACTTATG+AGG | 0.415484 | 6_3:+94133416 | Msa0966110:three_prime_UTR |
| CTGAAGTCGTTTACCAAGTT+CGG | 0.421690 | 6_3:+94133232 | Msa0966110:three_prime_UTR |
| AATGGTGGTTGTGGCGGCGG+TGG | 0.431666 | 6_3:-94126546 | None:intergenic |
| GCTTAGAGGTTCACCAAGTT+GGG | 0.431791 | 6_3:+94133106 | Msa0966110:CDS |
| CAAATATCAGCTTAATGAAC+GGG | 0.434364 | 6_3:+94133188 | Msa0966110:exon |
| GTATCTTTGTGCTTGAAATC+CGG | 0.434859 | 6_3:-94132405 | None:intergenic |
| TGAACTAAGCAGTTCACTAA+AGG | 0.436586 | 6_3:-94133497 | None:intergenic |
| GCAAATGGTGGTTGTGGCGG+CGG | 0.437130 | 6_3:-94126549 | None:intergenic |
| GGCGGTGTATTTCTTTGCAC+TGG | 0.440205 | 6_3:-94130488 | None:intergenic |
| GAACTAAGCAGTTCACTAAA+GGG | 0.441462 | 6_3:-94133496 | None:intergenic |
| GGTTGGAATGGGATTTCGGT+TGG | 0.444856 | 6_3:-94126599 | None:intergenic |
| AATGATGTTGTTCATGTTGA+GGG | 0.447305 | 6_3:+94126809 | Msa0966110:CDS |
| AGGGACCAAAATGAATATTA+CGG | 0.447882 | 6_3:+94126406 | Msa0966110:exon |
| TTGGTTTAGGTGATGAATCC+TGG | 0.456627 | 6_3:+94132874 | Msa0966110:intron |
| ATGTACAGCCTTCCATTGAC+TGG | 0.456827 | 6_3:-94130196 | None:intergenic |
| GCCCCAAGGACTTGACAAAT+AGG | 0.462544 | 6_3:-94130509 | None:intergenic |
| TTGGTTTAGGTGATGAGTCC+TGG | 0.466548 | 6_3:+94132208 | Msa0966110:intron |
| GGTGGAGTAGTTGGTGGTGG+TGG | 0.467507 | 6_3:-94126528 | None:intergenic |
| ACCAATTAGGTTGACGGAGT+TGG | 0.470487 | 6_3:-94126630 | None:intergenic |
| GAAGGCATTAATTAATTACA+TGG | 0.472070 | 6_3:-94133288 | None:intergenic |
| ACTTCTTTGGATCATCTAGA+AGG | 0.476515 | 6_3:-94130534 | None:intergenic |
| CGGAGTTGGCGAGTTTGGGT+TGG | 0.478361 | 6_3:-94126616 | None:intergenic |
| ATACTTATGAGGCTAATCAT+TGG | 0.480718 | 6_3:+94133427 | Msa0966110:three_prime_UTR |
| AACAAAGTGCAGAAACTAGC+TGG | 0.482118 | 6_3:+94133162 | Msa0966110:CDS |
| TTCATCTAGACTGAAAGAAC+TGG | 0.486016 | 6_3:+94132467 | Msa0966110:CDS |
| CATCCTTGCGCTTGAAGTCA+GGG | 0.493504 | 6_3:-94130689 | None:intergenic |
| AGGATGGAAATGTTTCCATC+TGG | 0.494468 | 6_3:+94130706 | Msa0966110:CDS |
| AACATGACACAAGGAAATCC+TGG | 0.500540 | 6_3:+94130154 | Msa0966110:CDS |
| GTAAGAAGATACACCGAACT+TGG | 0.502403 | 6_3:-94133245 | None:intergenic |
| GGCTCAGAGATTCACCAAGT+TGG | 0.503361 | 6_3:+94132442 | Msa0966110:CDS |
| AGGTTATCCTCGTGTTAAGA+AGG | 0.503436 | 6_3:+94127451 | Msa0966110:CDS |
| GGATTTCGATGATTTGCAAA+TGG | 0.506445 | 6_3:-94126564 | None:intergenic |
| AACAGTACCAATTAGGTTGA+CGG | 0.510399 | 6_3:-94126636 | None:intergenic |
| AAGATACTGGTTTAGGGCTG+TGG | 0.512113 | 6_3:+94132421 | Msa0966110:CDS |
| TACACATCAGAACTTTAAGA+AGG | 0.514718 | 6_3:-94133306 | None:intergenic |
| CCTGACTTCAAGCGCAAGGA+TGG | 0.515099 | 6_3:+94130690 | Msa0966110:CDS |
| GCCACTGTCATCACTCGCCT+TGG | 0.518557 | 6_3:+94126707 | Msa0966110:CDS |
| TCATTAATAAACCCAGTCAA+TGG | 0.522364 | 6_3:+94130184 | Msa0966110:CDS |
| TATTATCCCACCATTTAGCT+GGG | 0.523442 | 6_3:-94132248 | None:intergenic |
| GCGAGTGATGACAGTGGCGG+CGG | 0.524621 | 6_3:-94126702 | None:intergenic |
| AGTAGTTGGTGGTGGTGGAT+CGG | 0.527098 | 6_3:-94126523 | None:intergenic |
| TGGTGGTGGTGGATCGGAGA+CGG | 0.528862 | 6_3:-94126517 | None:intergenic |
| ACCTGAAACTGATATTGTTG+AGG | 0.530813 | 6_3:-94126875 | None:intergenic |
| AAGACACCGGTGAAGGGCTA+TGG | 0.531033 | 6_3:+94133084 | Msa0966110:CDS |
| GGAGGTGAAACAGAGAGAAC+TGG | 0.532010 | 6_3:-94133267 | None:intergenic |
| GTGATGACAGTGGCGGCGGA+AGG | 0.533443 | 6_3:-94126698 | None:intergenic |
| TGATTTGCAAATGGTGGTTG+TGG | 0.535876 | 6_3:-94126555 | None:intergenic |
| AGTCTAGATGAAACCCAACT+TGG | 0.537097 | 6_3:-94132456 | None:intergenic |
| TAAGGAGAAATCAGATATTG+AGG | 0.539728 | 6_3:+94127487 | Msa0966110:CDS |
| GGCGGTGGAGTAGTTGGTGG+TGG | 0.543559 | 6_3:-94126531 | None:intergenic |
| TGCAAAATCCAGCTAAATGG+TGG | 0.546781 | 6_3:+94132907 | Msa0966110:CDS |
| TGGAGCCTTGTCAAGCCAGA+TGG | 0.551248 | 6_3:-94130721 | None:intergenic |
| TGATGACAGTGGCGGCGGAA+GGG | 0.554487 | 6_3:-94126697 | None:intergenic |
| GAGAAATCAGATATTGAGGA+TGG | 0.557205 | 6_3:+94127491 | Msa0966110:CDS |
| TTTATCTAGACTGAAAGCAC+TGG | 0.557738 | 6_3:+94130752 | Msa0966110:CDS |
| TAAAACTACTTGCATTTGGG+AGG | 0.559322 | 6_3:+94126432 | Msa0966110:CDS |
| TGATAGCAAACGCAATGGAT+CGG | 0.561402 | 6_3:+94130570 | Msa0966110:CDS |
| TGTTGTTTCGGCTTCAACGG+TGG | 0.561621 | 6_3:-94133143 | None:intergenic |
| TGTACAGCCTTCCATTGACT+GGG | 0.562189 | 6_3:-94130195 | None:intergenic |
| AAACAAGCAAAGGACAGTAA+AGG | 0.563525 | 6_3:+94132516 | Msa0966110:CDS |
| TGAAATAAAGTCATCAGAGA+AGG | 0.567180 | 6_3:+94130107 | Msa0966110:CDS |
| TCAGAAATATGCAAGAGCTC+CGG | 0.567388 | 6_3:+94132386 | Msa0966110:intron |
| AGAGGAATCAAGAACTGAGA+AGG | 0.569300 | 6_3:-94126737 | None:intergenic |
| CACTTCCAAACTTCCACCGA+CGG | 0.569665 | 6_3:+94126671 | Msa0966110:CDS |
| TCATATCAGAAGAATCCAAA+AGG | 0.570337 | 6_3:+94133044 | Msa0966110:intron |
| CCAAATATCAGCTTAATGAA+CGG | 0.571151 | 6_3:+94133187 | Msa0966110:exon |
| AAAACTACTTGCATTTGGGA+GGG | 0.571218 | 6_3:+94126433 | Msa0966110:CDS |
| TGTTTCCATCTGGCTTGACA+AGG | 0.572374 | 6_3:+94130716 | Msa0966110:CDS |
| AAACAAACAAAAGATAGTAA+AGG | 0.572668 | 6_3:+94130801 | Msa0966110:CDS |
| TAATGATGTTGTTCATGTTG+AGG | 0.574995 | 6_3:+94126808 | Msa0966110:CDS |
| GGCGGCGGTGGAGTAGTTGG+TGG | 0.575603 | 6_3:-94126534 | None:intergenic |
| TAATAAACCCAGTCAATGGA+AGG | 0.578339 | 6_3:+94130188 | Msa0966110:CDS |
| TGCAAAACCCAGCTAAATGG+TGG | 0.578339 | 6_3:+94132241 | Msa0966110:CDS |
| GCTTGACAAGGCTCCAAAGT+CGG | 0.581634 | 6_3:+94130728 | Msa0966110:CDS |
| TAGATGATCCAAAGAAGTGG+TGG | 0.582459 | 6_3:+94130539 | Msa0966110:CDS |
| GGCGGCGGAAGGGTTGCCGT+CGG | 0.585509 | 6_3:-94126687 | None:intergenic |
| ATCTAGACTGAAAGAACTGG+AGG | 0.593122 | 6_3:+94132470 | Msa0966110:CDS |
| TGTTAAATCCAAACAAGCAA+AGG | 0.594758 | 6_3:+94132506 | Msa0966110:CDS |
| AAGCACAAAGACACCGGTGA+AGG | 0.595007 | 6_3:+94133077 | Msa0966110:CDS |
| AGCACAAAGACACCGGTGAA+GGG | 0.601351 | 6_3:+94133078 | Msa0966110:CDS |
| TCTAAGCCATAGCCCTTCAC+CGG | 0.602685 | 6_3:-94133090 | None:intergenic |
| TTCTAGATGATCCAAAGAAG+TGG | 0.615615 | 6_3:+94130536 | Msa0966110:CDS |
| GTTTGTTTGGGTTTAACAGG+CGG | 0.616497 | 6_3:-94130786 | None:intergenic |
| TTTCGTGATAGCAAACGCAA+TGG | 0.619076 | 6_3:+94130565 | Msa0966110:CDS |
| GCCTATTTGTCAAGTCCTTG+GGG | 0.619487 | 6_3:+94130508 | Msa0966110:CDS |
| TTTCGATGATTTGCAAATGG+TGG | 0.624749 | 6_3:-94126561 | None:intergenic |
| AAATCACCATGAAAGACAAG+AGG | 0.625790 | 6_3:-94126755 | None:intergenic |
| GTACCCTGACTTCAAGCGCA+AGG | 0.626123 | 6_3:+94130686 | Msa0966110:CDS |
| GCAAAATCCAGCTAAATGGT+GGG | 0.631610 | 6_3:+94132908 | Msa0966110:CDS |
| GAAGGCTGTACATTCAACAA+AGG | 0.632731 | 6_3:+94130206 | Msa0966110:CDS |
| TGGTGGTGGATCGGAGACGG+AGG | 0.633192 | 6_3:-94126514 | None:intergenic |
| GCAAAACCCAGCTAAATGGT+GGG | 0.633906 | 6_3:+94132242 | Msa0966110:CDS |
| GTGGGATAATAGAGTAGACA+AGG | 0.638003 | 6_3:+94132260 | Msa0966110:CDS |
| TTTGCAAATGGTGGTTGTGG+CGG | 0.639402 | 6_3:-94126552 | None:intergenic |
| AGATGATCCAAAGAAGTGGT+GGG | 0.639731 | 6_3:+94130540 | Msa0966110:CDS |
| TCATCTAGAAGGTCGCCCCA+AGG | 0.647999 | 6_3:-94130523 | None:intergenic |
| TGAGGGTCAACTTTCTACTG+AGG | 0.657254 | 6_3:+94126826 | Msa0966110:CDS |
| GATTTCAAGCACAAAGACAC+CGG | 0.657516 | 6_3:+94133071 | Msa0966110:CDS |
| TGACACAAGGAAATCCTGGA+AGG | 0.668375 | 6_3:+94130158 | Msa0966110:CDS |
| AAACTGAGGAACATGACACA+AGG | 0.672639 | 6_3:+94130145 | Msa0966110:CDS |
| GGCATTAATTAATTACATGG+AGG | 0.675599 | 6_3:-94133285 | None:intergenic |
| TGTGTATAATCATAGCAACT+CGG | 0.677536 | 6_3:+94133323 | Msa0966110:three_prime_UTR |
| ACTGAGAAGGATCATGACCA+AGG | 0.689270 | 6_3:-94126724 | None:intergenic |
| GTGGGATAATAGATTAGACA+AGG | 0.691465 | 6_3:+94132926 | Msa0966110:CDS |
| AAAGCAGCCTTCTTAACACG+AGG | 0.696273 | 6_3:-94127458 | None:intergenic |
| TATCCATTCCGAGAAAACTG+AGG | 0.698752 | 6_3:+94130131 | Msa0966110:CDS |
| AAGGCGAGTGATGACAGTGG+CGG | 0.703637 | 6_3:-94126705 | None:intergenic |
| CCAAGGACTTGACAAATAGG+CGG | 0.713655 | 6_3:-94130506 | None:intergenic |
| ACCAAGGCGAGTGATGACAG+TGG | 0.758874 | 6_3:-94126708 | None:intergenic |
| AAGCTTAAGATGAAACTGCG+CGG | 0.762356 | 6_3:-94126786 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TGATTTATTATTTTTTGAAA+TGG | + | chr6_3:94127567-94127586 | Msa0966110:intron | 10.0% |
| !!! | GATTTATTATTTTTTGAAAT+GGG | + | chr6_3:94127568-94127587 | Msa0966110:intron | 10.0% |
| !! | TATTCTAATAAAATTTCTTT+GGG | - | chr6_3:94129394-94129413 | None:intergenic | 10.0% |
| !!! | ATTTAGTAATATTTTTGTTT+TGG | - | chr6_3:94129624-94129643 | None:intergenic | 10.0% |
| !! | CTATAAAAGTAAAAAAAAAA+GGG | - | chr6_3:94131499-94131518 | None:intergenic | 10.0% |
| !! | ACTATAAAAGTAAAAAAAAA+AGG | - | chr6_3:94131500-94131519 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTACTTTTATAGT+TGG | + | chr6_3:94131500-94131519 | Msa0966110:intron | 10.0% |
| !!! | TTTTTTTTACTTTTATAGTT+GGG | + | chr6_3:94131501-94131520 | Msa0966110:intron | 10.0% |
| !! | TATTAAAGTAAATATATCTT+TGG | - | chr6_3:94132638-94132657 | None:intergenic | 10.0% |
| !! | TGGTTTATGATATAATATTA+TGG | + | chr6_3:94127692-94127711 | Msa0966110:intron | 15.0% |
| !!! | CTATCTTTTATTATAGAAAT+AGG | - | chr6_3:94127873-94127892 | None:intergenic | 15.0% |
| !! | AATAAGCTTAAAACAATTTA+TGG | + | chr6_3:94128180-94128199 | Msa0966110:intron | 15.0% |
| !! | AATTTATGAATTCAATGTAT+TGG | - | chr6_3:94129310-94129329 | None:intergenic | 15.0% |
| !! | CTATTCTAATAAAATTTCTT+TGG | - | chr6_3:94129395-94129414 | None:intergenic | 15.0% |
| !!! | AGAAATTTTATTAGAATAGA+AGG | + | chr6_3:94129396-94129415 | Msa0966110:intron | 15.0% |
| !!! | ATGTTTTAATATTTTAGACT+TGG | - | chr6_3:94129701-94129720 | None:intergenic | 15.0% |
| !!! | TCTTTGATTATTATATTTTG+AGG | + | chr6_3:94130622-94130641 | Msa0966110:intron | 15.0% |
| !!! | CTTTGATTATTATATTTTGA+GGG | + | chr6_3:94130623-94130642 | Msa0966110:intron | 15.0% |
| !! | AATGCTATTAAAATTAAGTA+GGG | - | chr6_3:94131425-94131444 | None:intergenic | 15.0% |
| !! | AAATGCTATTAAAATTAAGT+AGG | - | chr6_3:94131424-94131443 | None:intergenic | 15.0% |
| !! | AGATAAAAAGTAATAAAATC+TGG | - | chr6_3:94131202-94131221 | None:intergenic | 15.0% |
| !! | TTCAAAAATTTAAGAGTTTA+AGG | + | chr6_3:94131333-94131352 | Msa0966110:intron | 15.0% |
| !! | AAATGCTATTAAAATTAAGT+AGG | + | chr6_3:94131424-94131443 | Msa0966110:intron | 15.0% |
| !! | AATGCTATTAAAATTAAGTA+GGG | + | chr6_3:94131425-94131444 | Msa0966110:intron | 15.0% |
| !! | AATGCTATTAAAATTAAGTA+GGG | - | chr6_3:94131425-94131444 | None:intergenic | 15.0% |
| !! | AAATGCTATTAAAATTAAGT+AGG | - | chr6_3:94131424-94131443 | None:intergenic | 15.0% |
| !! | AGATAAAAAGTAATAAAATC+TGG | - | chr6_3:94131202-94131221 | None:intergenic | 15.0% |
| !! | TTCAAAAATTTAAGAGTTTA+AGG | + | chr6_3:94131333-94131352 | Msa0966110:intron | 15.0% |
| !! | AAATGCTATTAAAATTAAGT+AGG | + | chr6_3:94131424-94131443 | Msa0966110:intron | 15.0% |
| !! | AATGCTATTAAAATTAAGTA+GGG | + | chr6_3:94131425-94131444 | Msa0966110:intron | 15.0% |
| !!! | TATTTCTGATATGATAAAAT+CGG | - | chr6_3:94132375-94132394 | None:intergenic | 15.0% |
| !! | AAATAGAAAAAGAAAAGAAA+TGG | - | chr6_3:94132747-94132766 | None:intergenic | 15.0% |
| !!! | TATATCCGTAATATTCATTT+TGG | - | chr6_3:94126414-94126433 | None:intergenic | 20.0% |
| !! | ATATAAAACTACTTGCATTT+GGG | + | chr6_3:94126429-94126448 | Msa0966110:CDS | 20.0% |
| !! | ACTTGTGATAATTTGAAAAT+TGG | + | chr6_3:94127106-94127125 | Msa0966110:intron | 20.0% |
| !!! | GTATCTTTTATCATAGAAAA+AGG | - | chr6_3:94128115-94128134 | None:intergenic | 20.0% |
| !!! | TTATCTTTTATCACAGAAAT+AGG | - | chr6_3:94128422-94128441 | None:intergenic | 20.0% |
| !! | ACATATATCATAAGTTGTTT+CGG | + | chr6_3:94128498-94128517 | Msa0966110:intron | 20.0% |
| !!! | ACATTTTAAAAATGTACTCT+AGG | + | chr6_3:94128662-94128681 | Msa0966110:intron | 20.0% |
| !!! | ATGTAAAATTAGAAGTATGA+GGG | + | chr6_3:94128695-94128714 | Msa0966110:intron | 20.0% |
| !! | AATTGAGTATTATTGATCAA+GGG | - | chr6_3:94128798-94128817 | None:intergenic | 20.0% |
| !! | AAATTGAGTATTATTGATCA+AGG | - | chr6_3:94128799-94128818 | None:intergenic | 20.0% |
| !!! | TTTTTGTAGAAGTACATATT+TGG | + | chr6_3:94128933-94128952 | Msa0966110:intron | 20.0% |
| !!! | TTTTGTAGAAGTACATATTT+GGG | + | chr6_3:94128934-94128953 | Msa0966110:intron | 20.0% |
| !!! | GATTTGGTTAAAATTAAGTT+TGG | - | chr6_3:94129081-94129100 | None:intergenic | 20.0% |
| !!! | TTGATTTTGTGATATTGATT+TGG | - | chr6_3:94129097-94129116 | None:intergenic | 20.0% |
| !!! | TTTTAGATGCTAAAAGAAAT+TGG | + | chr6_3:94129250-94129269 | Msa0966110:intron | 20.0% |
| !! | TTTAGATGCTAAAAGAAATT+GGG | + | chr6_3:94129251-94129270 | Msa0966110:intron | 20.0% |
| !!! | TCACAAAAATTTACTTTTCA+AGG | + | chr6_3:94129331-94129350 | Msa0966110:intron | 20.0% |
| !!! | AATTTTATTAGAATAGAAGG+AGG | + | chr6_3:94129399-94129418 | Msa0966110:intron | 20.0% |
| !! | TACTGATATTCTATTAAACA+AGG | + | chr6_3:94129433-94129452 | Msa0966110:intron | 20.0% |
| !!! | TTCTACTCAATTAATTTTGT+AGG | + | chr6_3:94129538-94129557 | Msa0966110:intron | 20.0% |
| !!! | AGTAATATTTTTGTTTTGGT+AGG | - | chr6_3:94129620-94129639 | None:intergenic | 20.0% |
| !! | AAAGGATACAAATCAAAAAA+TGG | - | chr6_3:94130246-94130265 | None:intergenic | 20.0% |
| !! | ATTTCAGAATACAAATATGA+AGG | - | chr6_3:94130307-94130326 | None:intergenic | 20.0% |
| !!! | CTTTCAAAATCTTCATTTTT+TGG | - | chr6_3:94130355-94130374 | None:intergenic | 20.0% |
| !! | TAAATCAAATGGAATTACTT+TGG | - | chr6_3:94130460-94130479 | None:intergenic | 20.0% |
| !! | TATATTTGTATCTACTTAGT+AGG | + | chr6_3:94130653-94130672 | Msa0966110:intron | 20.0% |
| !!! | TTACTATCTTTTGTTTGTTT+GGG | - | chr6_3:94130801-94130820 | None:intergenic | 20.0% |
| !!! | TTTACTATCTTTTGTTTGTT+TGG | - | chr6_3:94130802-94130821 | None:intergenic | 20.0% |
| !! | AAACAAACAAAAGATAGTAA+AGG | + | chr6_3:94130801-94130820 | Msa0966110:CDS | 20.0% |
| !! | AAACAAATTTGAATTGAGTA+GGG | - | chr6_3:94131072-94131091 | None:intergenic | 20.0% |
| !! | TAAACAAATTTGAATTGAGT+AGG | - | chr6_3:94131073-94131092 | None:intergenic | 20.0% |
| !!! | AATTTTGCGATAATTTTTTG+CGG | - | chr6_3:94131167-94131186 | None:intergenic | 20.0% |
| !! | AAACAAATTTGAATTGAGTA+GGG | - | chr6_3:94131072-94131091 | None:intergenic | 20.0% |
| !! | TAAACAAATTTGAATTGAGT+AGG | - | chr6_3:94131073-94131092 | None:intergenic | 20.0% |
| !!! | AATTTTGCGATAATTTTTTG+CGG | - | chr6_3:94131167-94131186 | None:intergenic | 20.0% |
| !! | ATAATTAACCCTTTATAGTT+TGG | + | chr6_3:94132051-94132070 | Msa0966110:intron | 20.0% |
| !! | ACATTGATCAAACATAAAAA+TGG | - | chr6_3:94132086-94132105 | None:intergenic | 20.0% |
| !! | AAAAGAAAAGAAATGGAAAA+AGG | - | chr6_3:94132740-94132759 | None:intergenic | 20.0% |
| !! | AATTGAACTTGAACTTAATA+TGG | - | chr6_3:94132845-94132864 | None:intergenic | 20.0% |
| ! | GATATAAAACTACTTGCATT+TGG | + | chr6_3:94126428-94126447 | Msa0966110:CDS | 25.0% |
| ! | TAGAAAAAATGAACCCAATA+CGG | + | chr6_3:94126480-94126499 | Msa0966110:CDS | 25.0% |
| ! | AACAAAGTTGTAACATTGTA+TGG | - | chr6_3:94126922-94126941 | None:intergenic | 25.0% |
| ! | CTTCTAATAAAATTCGTGTT+TGG | - | chr6_3:94127025-94127044 | None:intergenic | 25.0% |
| !!! | ACGAATTTTATTAGAAGTGT+CGG | + | chr6_3:94127028-94127047 | Msa0966110:intron | 25.0% |
| !! | CACTGGTTATAATTTGAAAA+TGG | + | chr6_3:94127241-94127260 | Msa0966110:intron | 25.0% |
| !!! | TGTTGTTTAACATGTTTTTG+TGG | + | chr6_3:94127366-94127385 | Msa0966110:intron | 25.0% |
| !! | CAAAGTCTTAATTTTGTTGA+AGG | + | chr6_3:94127431-94127450 | Msa0966110:CDS | 25.0% |
| !! | TTCTTTAACTTTCCAAACAA+AGG | - | chr6_3:94127636-94127655 | None:intergenic | 25.0% |
| ! | AATAAGCTGAAAACAACTTA+TGG | + | chr6_3:94127938-94127957 | Msa0966110:intron | 25.0% |
| !! | AACTTAATCGTTTTCCATAT+AGG | + | chr6_3:94128383-94128402 | Msa0966110:intron | 25.0% |
| !! | ATATGTTTTTCGTAAGCTTA+TGG | + | chr6_3:94128452-94128471 | Msa0966110:intron | 25.0% |
| ! | AACTTATGATATATGTCCAT+AGG | - | chr6_3:94128494-94128513 | None:intergenic | 25.0% |
| !! | GTTACTAGATAAGTTCTAAT+AGG | + | chr6_3:94128554-94128573 | Msa0966110:intron | 25.0% |
| ! | TCTAATAGGTAAATCTAAAC+AGG | + | chr6_3:94128568-94128587 | Msa0966110:intron | 25.0% |
| !!! | TTTTAAAAATGTACTCTAGG+AGG | + | chr6_3:94128665-94128684 | Msa0966110:intron | 25.0% |
| !! | ACTTCTAATTTTACATGCTT+AGG | - | chr6_3:94128691-94128710 | None:intergenic | 25.0% |
| !! | CATGTAAAATTAGAAGTATG+AGG | + | chr6_3:94128694-94128713 | Msa0966110:intron | 25.0% |
| !! | TGTAAAATTAGAAGTATGAG+GGG | + | chr6_3:94128696-94128715 | Msa0966110:intron | 25.0% |
| !! | TCTATTTTCTTGTAACCATT+CGG | + | chr6_3:94128739-94128758 | Msa0966110:intron | 25.0% |
| ! | AACATGCACTATATTTATGT+GGG | - | chr6_3:94128896-94128915 | None:intergenic | 25.0% |
| ! | AAACATGCACTATATTTATG+TGG | - | chr6_3:94128897-94128916 | None:intergenic | 25.0% |
| ! | ACATAAATATAGTGCATGTT+TGG | + | chr6_3:94128896-94128915 | Msa0966110:intron | 25.0% |
| ! | ATGCAATAGATACTAATTTC+AGG | - | chr6_3:94128985-94129004 | None:intergenic | 25.0% |
| ! | GCATTCTTCTCTAATAAATT+GGG | + | chr6_3:94129155-94129174 | Msa0966110:intron | 25.0% |
| ! | TCTAATAAATTGGGACAAAA+GGG | + | chr6_3:94129164-94129183 | Msa0966110:intron | 25.0% |
| !! | ATTAATTTTGTAGGATCGAA+AGG | + | chr6_3:94129547-94129566 | Msa0966110:intron | 25.0% |
| !! | TTAATTTTGTAGGATCGAAA+GGG | + | chr6_3:94129548-94129567 | Msa0966110:intron | 25.0% |
| ! | GACAACAATGATATTAAAGA+TGG | + | chr6_3:94129973-94129992 | Msa0966110:intron | 25.0% |
| !! | AATTTTGTGTATCTAAACGT+AGG | + | chr6_3:94130324-94130343 | Msa0966110:intron | 25.0% |
| ! | TGGCTGTAAAATAAATCAAA+TGG | - | chr6_3:94130471-94130490 | None:intergenic | 25.0% |
| ! | TTTGTTAGTTGTGATATAGT+TGG | + | chr6_3:94130869-94130888 | Msa0966110:intron | 25.0% |
| ! | AGTGCAGAAAAACAAAATTA+GGG | - | chr6_3:94131039-94131058 | None:intergenic | 25.0% |
| !!! | TAATCAAACTTTGTTTTAGC+AGG | + | chr6_3:94131361-94131380 | Msa0966110:intron | 25.0% |
| !!! | AATCAAACTTTGTTTTAGCA+GGG | + | chr6_3:94131362-94131381 | Msa0966110:intron | 25.0% |
| ! | AGTGCAGAAAAACAAAATTA+GGG | - | chr6_3:94131039-94131058 | None:intergenic | 25.0% |
| !!! | TAATCAAACTTTGTTTTAGC+AGG | + | chr6_3:94131361-94131380 | Msa0966110:intron | 25.0% |
| !!! | AATCAAACTTTGTTTTAGCA+GGG | + | chr6_3:94131362-94131381 | Msa0966110:intron | 25.0% |
| ! | AAGCATGAAATAAACTTGTA+GGG | - | chr6_3:94132323-94132342 | None:intergenic | 25.0% |
| ! | TAAGCATGAAATAAACTTGT+AGG | - | chr6_3:94132324-94132343 | None:intergenic | 25.0% |
| ! | ATAGAAAAAGACACGAAAAA+AGG | - | chr6_3:94132809-94132828 | None:intergenic | 25.0% |
| !!! | GAAGGCATTAATTAATTACA+TGG | - | chr6_3:94133291-94133310 | None:intergenic | 25.0% |
| ! | ATTCAGATAAAAACGTATGT+GGG | - | chr6_3:94133394-94133413 | None:intergenic | 25.0% |
| ! | AATTCAGATAAAAACGTATG+TGG | - | chr6_3:94133395-94133414 | None:intergenic | 25.0% |
| ! | TGAGCATTATTATACTTATG+AGG | + | chr6_3:94133416-94133435 | Msa0966110:three_prime_UTR | 25.0% |
| AGGGACCAAAATGAATATTA+CGG | + | chr6_3:94126406-94126425 | Msa0966110:exon | 30.0% | |
| ! | GTTTGTTAACAGTACCAATT+AGG | - | chr6_3:94126646-94126665 | None:intergenic | 30.0% |
| TAATGATGTTGTTCATGTTG+AGG | + | chr6_3:94126808-94126827 | Msa0966110:CDS | 30.0% | |
| AATGATGTTGTTCATGTTGA+GGG | + | chr6_3:94126809-94126828 | Msa0966110:CDS | 30.0% | |
| TGTAACATTGTATGGTATGA+AGG | - | chr6_3:94126914-94126933 | None:intergenic | 30.0% | |
| CACTAGTAATAAATGTGTGT+TGG | + | chr6_3:94126988-94127007 | Msa0966110:intron | 30.0% | |
| ACTTCTAATAAAGCCATGTT+CGG | - | chr6_3:94127163-94127182 | None:intergenic | 30.0% | |
| ! | CAGGACTCTAATTTTATTAG+AGG | + | chr6_3:94127316-94127335 | Msa0966110:intron | 30.0% |
| !! | GGTTTTTAATTGTGTGTTGT+TGG | + | chr6_3:94127387-94127406 | Msa0966110:intron | 30.0% |
| TAAGGAGAAATCAGATATTG+AGG | + | chr6_3:94127487-94127506 | Msa0966110:CDS | 30.0% | |
| !!! | TTTTTGAAATGGGAAAGTTG+AGG | + | chr6_3:94127578-94127597 | Msa0966110:intron | 30.0% |
| AAAGTTGAGGCAATAGAAAT+TGG | + | chr6_3:94127591-94127610 | Msa0966110:intron | 30.0% | |
| TGACATCACATATTGATCTA+AGG | + | chr6_3:94127776-94127795 | Msa0966110:intron | 30.0% | |
| !! | ATTAACTTGTGTATCCAAAC+AGG | - | chr6_3:94127803-94127822 | None:intergenic | 30.0% |
| AAATTGTTTGAGAGAGCTTA+TGG | - | chr6_3:94127992-94128011 | None:intergenic | 30.0% | |
| AATCAGAGTCAGATTCTATT+TGG | - | chr6_3:94128056-94128075 | None:intergenic | 30.0% | |
| CTTATTTCCAAAAATTCTCC+AGG | - | chr6_3:94128166-94128185 | None:intergenic | 30.0% | |
| ! | AAACACTTGTGAAACTGTTT+TGG | - | chr6_3:94128235-94128254 | None:intergenic | 30.0% |
| TGAAATACGTCAATCTAAAC+AGG | + | chr6_3:94128271-94128290 | Msa0966110:intron | 30.0% | |
| ! | GGAAAACGATTAAGTTGTAA+GGG | - | chr6_3:94128379-94128398 | None:intergenic | 30.0% |
| ! | TGGAAAACGATTAAGTTGTA+AGG | - | chr6_3:94128380-94128399 | None:intergenic | 30.0% |
| GCTATACATAAACACCTATA+TGG | - | chr6_3:94128400-94128419 | None:intergenic | 30.0% | |
| AAATAAGCTGAAACAACCTA+TGG | + | chr6_3:94128475-94128494 | Msa0966110:intron | 30.0% | |
| AACCACTTGTGAAACTATTT+GGG | - | chr6_3:94128532-94128551 | None:intergenic | 30.0% | |
| TAACCACTTGTGAAACTATT+TGG | - | chr6_3:94128533-94128552 | None:intergenic | 30.0% | |
| CTTTGAATATGCATAGTGTT+AGG | + | chr6_3:94128626-94128645 | Msa0966110:intron | 30.0% | |
| GGCATTCTTCTCTAATAAAT+TGG | + | chr6_3:94129154-94129173 | Msa0966110:intron | 30.0% | |
| CTCTAATAAATTGGGACAAA+AGG | + | chr6_3:94129163-94129182 | Msa0966110:intron | 30.0% | |
| ! | GAGTAGAATCCTTCAATTTT+GGG | - | chr6_3:94129526-94129545 | None:intergenic | 30.0% |
| ! | TGAGTAGAATCCTTCAATTT+TGG | - | chr6_3:94129527-94129546 | None:intergenic | 30.0% |
| ! | TAATTTTGTAGGATCGAAAG+GGG | + | chr6_3:94129549-94129568 | Msa0966110:intron | 30.0% |
| ! | TATGTTTAAGCTTTGTGACT+AGG | - | chr6_3:94129787-94129806 | None:intergenic | 30.0% |
| TGAGTGAAATCACAAAATTG+TGG | + | chr6_3:94129924-94129943 | Msa0966110:intron | 30.0% | |
| ! | TGGATTTTCATGATTCTGAT+CGG | + | chr6_3:94129944-94129963 | Msa0966110:intron | 30.0% |
| TGAAATAAAGTCATCAGAGA+AGG | + | chr6_3:94130107-94130126 | Msa0966110:CDS | 30.0% | |
| TTTATTAATGACATCCTTCC+AGG | - | chr6_3:94130175-94130194 | None:intergenic | 30.0% | |
| TCATTAATAAACCCAGTCAA+TGG | + | chr6_3:94130184-94130203 | Msa0966110:CDS | 30.0% | |
| TATTGGCAAATGAAAAAGGA+GGG | - | chr6_3:94130275-94130294 | None:intergenic | 30.0% | |
| TTATTGGCAAATGAAAAAGG+AGG | - | chr6_3:94130276-94130295 | None:intergenic | 30.0% | |
| !! | TCCTTTTTCATTTGCCAATA+AGG | + | chr6_3:94130275-94130294 | Msa0966110:intron | 30.0% |
| TCCTTATTGGCAAATGAAAA+AGG | - | chr6_3:94130279-94130298 | None:intergenic | 30.0% | |
| !! | TGAAGATTTTGAAAGCAAGA+CGG | + | chr6_3:94130360-94130379 | Msa0966110:CDS | 30.0% |
| TCAAATATTTGCATTAGCTC+TGG | + | chr6_3:94130412-94130431 | Msa0966110:intron | 30.0% | |
| ! | TTTGTTTGTTTGGGTTTAAC+AGG | - | chr6_3:94130792-94130811 | None:intergenic | 30.0% |
| !! | TACAAGGTCGCTATTTTATA+GGG | - | chr6_3:94131456-94131475 | None:intergenic | 30.0% |
| !! | TTACAAGGTCGCTATTTTAT+AGG | - | chr6_3:94131455-94131474 | None:intergenic | 30.0% |
| CAGTGCAGAAAAACAAAATT+AGG | - | chr6_3:94131040-94131059 | None:intergenic | 30.0% | |
| CAAGATTAGAACACTATGAA+AGG | - | chr6_3:94131299-94131318 | None:intergenic | 30.0% | |
| !! | TTACAAGGTCGCTATTTTAT+AGG | + | chr6_3:94131455-94131474 | Msa0966110:intron | 30.0% |
| !! | TACAAGGTCGCTATTTTATA+GGG | + | chr6_3:94131456-94131475 | Msa0966110:intron | 30.0% |
| TTCTAGTCCCTATAAAATAG+CGG | + | chr6_3:94130969-94130988 | Msa0966110:intron | 30.0% | |
| CAGTGCAGAAAAACAAAATT+AGG | - | chr6_3:94131040-94131059 | None:intergenic | 30.0% | |
| CAAGATTAGAACACTATGAA+AGG | - | chr6_3:94131299-94131318 | None:intergenic | 30.0% | |
| !! | TTACAAGGTCGCTATTTTAT+AGG | + | chr6_3:94131455-94131474 | Msa0966110:intron | 30.0% |
| !! | TACAAGGTCGCTATTTTATA+GGG | + | chr6_3:94131456-94131475 | Msa0966110:intron | 30.0% |
| AAGAGAAAAGAAACGGAAAA+CGG | - | chr6_3:94132151-94132170 | None:intergenic | 30.0% | |
| AGATAGGAAGAGAAAAGAAA+CGG | - | chr6_3:94132158-94132177 | None:intergenic | 30.0% | |
| TATGGTGATAAAACAGAGAT+AGG | - | chr6_3:94132174-94132193 | None:intergenic | 30.0% | |
| ! | TAAGCATCTCAAATTGGTTT+AGG | + | chr6_3:94132195-94132214 | Msa0966110:intron | 30.0% |
| TGTTAAATCCAAACAAGCAA+AGG | + | chr6_3:94132506-94132525 | Msa0966110:CDS | 30.0% | |
| ! | AACTCTATCACAATTTGCTT+AGG | - | chr6_3:94132578-94132597 | None:intergenic | 30.0% |
| TAAGCAAATTGTGATAGAGT+TGG | + | chr6_3:94132577-94132596 | Msa0966110:intron | 30.0% | |
| !! | TATCTTTGGTTTGACTTTGA+TGG | - | chr6_3:94132624-94132643 | None:intergenic | 30.0% |
| AAAAAGGACATGAGAATCTT+GGG | - | chr6_3:94132724-94132743 | None:intergenic | 30.0% | |
| ! | AAGTTCAATTTTTCCCAACT+TGG | + | chr6_3:94132855-94132874 | Msa0966110:intron | 30.0% |
| ! | AATTTTTCCCAACTTGGTTT+AGG | + | chr6_3:94132861-94132880 | Msa0966110:intron | 30.0% |
| TAGCGTGAATTAAACTTGTA+GGG | - | chr6_3:94132986-94133005 | None:intergenic | 30.0% | |
| ATAGCGTGAATTAAACTTGT+AGG | - | chr6_3:94132987-94133006 | None:intergenic | 30.0% | |
| TCATATCAGAAGAATCCAAA+AGG | + | chr6_3:94133044-94133063 | Msa0966110:intron | 30.0% | |
| CCAAATATCAGCTTAATGAA+CGG | + | chr6_3:94133187-94133206 | Msa0966110:exon | 30.0% | |
| CAAATATCAGCTTAATGAAC+GGG | + | chr6_3:94133188-94133207 | Msa0966110:exon | 30.0% | |
| GGCATTAATTAATTACATGG+AGG | - | chr6_3:94133288-94133307 | None:intergenic | 30.0% | |
| ! | TACACATCAGAACTTTAAGA+AGG | - | chr6_3:94133309-94133328 | None:intergenic | 30.0% |
| TGTGTATAATCATAGCAACT+CGG | + | chr6_3:94133323-94133342 | Msa0966110:three_prime_UTR | 30.0% | |
| ATACTTATGAGGCTAATCAT+TGG | + | chr6_3:94133427-94133446 | Msa0966110:three_prime_UTR | 30.0% | |
| TAAAACTACTTGCATTTGGG+AGG | + | chr6_3:94126432-94126451 | Msa0966110:CDS | 35.0% | |
| AAAACTACTTGCATTTGGGA+GGG | + | chr6_3:94126433-94126452 | Msa0966110:CDS | 35.0% | |
| !!! | GTTTTGGAAACTCATCGAAA+GGG | + | chr6_3:94126455-94126474 | Msa0966110:CDS | 35.0% |
| ! | TTTCGATGATTTGCAAATGG+TGG | - | chr6_3:94126564-94126583 | None:intergenic | 35.0% |
| ! | GGATTTCGATGATTTGCAAA+TGG | - | chr6_3:94126567-94126586 | None:intergenic | 35.0% |
| !!! | TTCGGTTGGTTTTTGGAATT+TGG | - | chr6_3:94126588-94126607 | None:intergenic | 35.0% |
| !! | AACAGTACCAATTAGGTTGA+CGG | - | chr6_3:94126639-94126658 | None:intergenic | 35.0% |
| TTGATTCCTCTTGTCTTTCA+TGG | + | chr6_3:94126749-94126768 | Msa0966110:CDS | 35.0% | |
| AAATCACCATGAAAGACAAG+AGG | - | chr6_3:94126758-94126777 | None:intergenic | 35.0% | |
| TCTTGTCTTTCATGGTGATT+TGG | + | chr6_3:94126757-94126776 | Msa0966110:CDS | 35.0% | |
| ACCTCAACAATATCAGTTTC+AGG | + | chr6_3:94126874-94126893 | Msa0966110:CDS | 35.0% | |
| ACCTGAAACTGATATTGTTG+AGG | - | chr6_3:94126878-94126897 | None:intergenic | 35.0% | |
| TGTTATGACATGACATGTGT+TGG | + | chr6_3:94127274-94127293 | Msa0966110:intron | 35.0% | |
| GAGAAATCAGATATTGAGGA+TGG | + | chr6_3:94127491-94127510 | Msa0966110:CDS | 35.0% | |
| AACAAAGGCTTAACATCACT+TGG | - | chr6_3:94127621-94127640 | None:intergenic | 35.0% | |
| AGTGATGTTAAGCCTTTGTT+TGG | + | chr6_3:94127621-94127640 | Msa0966110:intron | 35.0% | |
| ATTGTCACTACATAGTGAGT+TGG | + | chr6_3:94127660-94127679 | Msa0966110:intron | 35.0% | |
| ! | TAGTGAGTTGGATCGAAATA+TGG | + | chr6_3:94127672-94127691 | Msa0966110:intron | 35.0% |
| ! | TATTGATCTAAGGTCCTGTT+TGG | + | chr6_3:94127786-94127805 | Msa0966110:intron | 35.0% |
| TTTCATAAGCTATCCTGAAG+AGG | + | chr6_3:94127908-94127927 | Msa0966110:intron | 35.0% | |
| CTTATTTCCATAACCTCTTC+AGG | - | chr6_3:94127924-94127943 | None:intergenic | 35.0% | |
| GAGTCAGATTCTATTTGGAT+TGG | - | chr6_3:94128051-94128070 | None:intergenic | 35.0% | |
| ! | AAGCTATCCTGGAGAATTTT+TGG | + | chr6_3:94128156-94128175 | Msa0966110:intron | 35.0% |
| AGTTGGAAATCATAGAGTCA+GGG | - | chr6_3:94128297-94128316 | None:intergenic | 35.0% | |
| AAGTTGGAAATCATAGAGTC+AGG | - | chr6_3:94128298-94128317 | None:intergenic | 35.0% | |
| ATGCATAGTGTTAGGAATGT+AGG | + | chr6_3:94128634-94128653 | Msa0966110:intron | 35.0% | |
| CAGTAGAAAGATTGAGAAGA+AGG | - | chr6_3:94128833-94128852 | None:intergenic | 35.0% | |
| ! | ATAGTGCATGTTTGGTTTCA+AGG | + | chr6_3:94128904-94128923 | Msa0966110:intron | 35.0% |
| ! | ACTAATTTCAGGTCAAAACG+AGG | - | chr6_3:94128974-94128993 | None:intergenic | 35.0% |
| ACCACACTTCAATAATTGAC+TGG | + | chr6_3:94129133-94129152 | Msa0966110:intron | 35.0% | |
| ATCGCATGAAAACGTGAAAT+CGG | - | chr6_3:94129849-94129868 | None:intergenic | 35.0% | |
| ! | GGATTTTCATGATTCTGATC+GGG | + | chr6_3:94129945-94129964 | Msa0966110:intron | 35.0% |
| !! | GAATTTTGTTTGTGTGATGC+TGG | + | chr6_3:94130015-94130034 | Msa0966110:intron | 35.0% |
| !! | TATGAGCTCTGATAAGCTTT+TGG | + | chr6_3:94130044-94130063 | Msa0966110:intron | 35.0% |
| TAATAAACCCAGTCAATGGA+AGG | + | chr6_3:94130188-94130207 | Msa0966110:CDS | 35.0% | |
| GAAAAAGGAGGGCAAAATAA+AGG | - | chr6_3:94130264-94130283 | None:intergenic | 35.0% | |
| TATGAAGGATGTGTCCTTAT+TGG | - | chr6_3:94130292-94130311 | None:intergenic | 35.0% | |
| ACTTCTTTGGATCATCTAGA+AGG | - | chr6_3:94130537-94130556 | None:intergenic | 35.0% | |
| TTCTAGATGATCCAAAGAAG+TGG | + | chr6_3:94130536-94130555 | Msa0966110:CDS | 35.0% | |
| ! | ATCGGTAATGATTGATGACT+TGG | + | chr6_3:94130588-94130607 | Msa0966110:intron | 35.0% |
| ! | TCGGTAATGATTGATGACTT+GGG | + | chr6_3:94130589-94130608 | Msa0966110:intron | 35.0% |
| ! | AGTCTAGATAAAACCGACTT+TGG | - | chr6_3:94130744-94130763 | None:intergenic | 35.0% |
| ! | TTTATCTAGACTGAAAGCAC+TGG | + | chr6_3:94130752-94130771 | Msa0966110:CDS | 35.0% |
| TGGAACAAAGAAATTCTCAG+AGG | + | chr6_3:94130889-94130908 | Msa0966110:intron | 35.0% | |
| AAGTAGGGACTAAACTTACA+AGG | - | chr6_3:94131440-94131459 | None:intergenic | 35.0% | |
| AAGTAGGGACTAAACTTACA+AGG | + | chr6_3:94131440-94131459 | Msa0966110:intron | 35.0% | |
| !! | TACAAGGCCGCTATTTTATA+GGG | - | chr6_3:94131544-94131563 | None:intergenic | 35.0% |
| !! | TTACAAGGCCGCTATTTTAT+AGG | - | chr6_3:94131545-94131564 | None:intergenic | 35.0% |
| AAGTAGGGACTAAACTTACA+AGG | - | chr6_3:94131440-94131459 | None:intergenic | 35.0% | |
| AAGTAGGGACTAAACTTACA+AGG | + | chr6_3:94131440-94131459 | Msa0966110:intron | 35.0% | |
| GAGCATCTCCAAACTATAAA+GGG | - | chr6_3:94132062-94132081 | None:intergenic | 35.0% | |
| ! | AGAGCATCTCCAAACTATAA+AGG | - | chr6_3:94132063-94132082 | None:intergenic | 35.0% |
| ! | CCAATTTGAGATGCTTAGTA+TGG | - | chr6_3:94132192-94132211 | None:intergenic | 35.0% |
| CCATACTAAGCATCTCAAAT+TGG | + | chr6_3:94132189-94132208 | Msa0966110:intron | 35.0% | |
| TATTATCCCACCATTTAGCT+GGG | - | chr6_3:94132251-94132270 | None:intergenic | 35.0% | |
| TCCATATTCTGCTTTGTCTT+TGG | + | chr6_3:94132287-94132306 | Msa0966110:intron | 35.0% | |
| CCATATTCTGCTTTGTCTTT+GGG | + | chr6_3:94132288-94132307 | Msa0966110:intron | 35.0% | |
| GTATCTTTGTGCTTGAAATC+CGG | - | chr6_3:94132408-94132427 | None:intergenic | 35.0% | |
| GATTTCAAGCACAAAGATAC+TGG | + | chr6_3:94132408-94132427 | Msa0966110:CDS | 35.0% | |
| !! | AAGCACAAAGATACTGGTTT+AGG | + | chr6_3:94132414-94132433 | Msa0966110:CDS | 35.0% |
| !! | AGCACAAAGATACTGGTTTA+GGG | + | chr6_3:94132415-94132434 | Msa0966110:CDS | 35.0% |
| TTCATCTAGACTGAAAGAAC+TGG | + | chr6_3:94132467-94132486 | Msa0966110:CDS | 35.0% | |
| TTTACTGTCCTTTGCTTGTT+TGG | - | chr6_3:94132517-94132536 | None:intergenic | 35.0% | |
| AAACAAGCAAAGGACAGTAA+AGG | + | chr6_3:94132516-94132535 | Msa0966110:CDS | 35.0% | |
| GAAAAAGGACATGAGAATCT+TGG | - | chr6_3:94132725-94132744 | None:intergenic | 35.0% | |
| TTCATCACCTAAACCAAGTT+GGG | - | chr6_3:94132871-94132890 | None:intergenic | 35.0% | |
| ATTCATCACCTAAACCAAGT+TGG | - | chr6_3:94132872-94132891 | None:intergenic | 35.0% | |
| ! | ATTTTGCAGCAAATCATTCC+AGG | - | chr6_3:94132895-94132914 | None:intergenic | 35.0% |
| GTGGGATAATAGATTAGACA+AGG | + | chr6_3:94132926-94132945 | Msa0966110:CDS | 35.0% | |
| !! | GTTTCTGCACTTTGTTGTTT+CGG | - | chr6_3:94133158-94133177 | None:intergenic | 35.0% |
| CCGTTCATTAAGCTGATATT+TGG | - | chr6_3:94133190-94133209 | None:intergenic | 35.0% | |
| !! | GCTAATCATTGGTCATTTTC+TGG | + | chr6_3:94133438-94133457 | Msa0966110:three_prime_UTR | 35.0% |
| TGTTGAAAAAACAGTCACAG+TGG | - | chr6_3:94133471-94133490 | None:intergenic | 35.0% | |
| !!! | GGTTTTGGAAACTCATCGAA+AGG | + | chr6_3:94126454-94126473 | Msa0966110:CDS | 40.0% |
| ! | TGATTTGCAAATGGTGGTTG+TGG | - | chr6_3:94126558-94126577 | None:intergenic | 40.0% |
| !!! | ATGGGATTTCGGTTGGTTTT+TGG | - | chr6_3:94126595-94126614 | None:intergenic | 40.0% |
| !! | TTTGGGTTGGAATGGGATTT+CGG | - | chr6_3:94126606-94126625 | None:intergenic | 40.0% |
| GTGGAAGTTTGGAAGTGAAT+AGG | - | chr6_3:94126668-94126687 | None:intergenic | 40.0% | |
| AGAGGAATCAAGAACTGAGA+AGG | - | chr6_3:94126740-94126759 | None:intergenic | 40.0% | |
| AAGCTTAAGATGAAACTGCG+CGG | - | chr6_3:94126789-94126808 | None:intergenic | 40.0% | |
| ATATGTCAGTGTGTCAGTCT+CGG | - | chr6_3:94127082-94127101 | None:intergenic | 40.0% | |
| !! | TTGGTGTTGTTGCTAGGTTA+AGG | + | chr6_3:94127406-94127425 | Msa0966110:intron | 40.0% |
| AGGTTATCCTCGTGTTAAGA+AGG | + | chr6_3:94127451-94127470 | Msa0966110:CDS | 40.0% | |
| ! | GAAGGCTGCTTTAACTTCTA+AGG | + | chr6_3:94127469-94127488 | Msa0966110:CDS | 40.0% |
| !! | AAGTTTTGTCCCACTAAGTG+GGG | - | chr6_3:94127742-94127761 | None:intergenic | 40.0% |
| !! | CAAGTTTTGTCCCACTAAGT+GGG | - | chr6_3:94127743-94127762 | None:intergenic | 40.0% |
| !! | TCAAGTTTTGTCCCACTAAG+TGG | - | chr6_3:94127744-94127763 | None:intergenic | 40.0% |
| AAGCTATCCTGAAGAGGTTA+TGG | + | chr6_3:94127914-94127933 | Msa0966110:intron | 40.0% | |
| AACTGCTTCATAAGCTATCC+TGG | + | chr6_3:94128145-94128164 | Msa0966110:intron | 40.0% | |
| GCCTCATAGAATATGCACTA+AGG | + | chr6_3:94128325-94128344 | Msa0966110:intron | 40.0% | |
| GCCTTAGTGCATATTCTATG+AGG | - | chr6_3:94128329-94128348 | None:intergenic | 40.0% | |
| CTCCCAAATAGTTTCACAAG+TGG | + | chr6_3:94128527-94128546 | Msa0966110:intron | 40.0% | |
| !! | ACCTGCTTTTGCAGTTGTAT+AGG | + | chr6_3:94128766-94128785 | Msa0966110:intron | 40.0% |
| !! | CCTGCTTTTGCAGTTGTATA+GGG | + | chr6_3:94128767-94128786 | Msa0966110:intron | 40.0% |
| !! | CTGCTTTTGCAGTTGTATAG+GGG | + | chr6_3:94128768-94128787 | Msa0966110:intron | 40.0% |
| TCTTGCGTCTCTATGTGTTA+GGG | - | chr6_3:94128870-94128889 | None:intergenic | 40.0% | |
| TTCTTGCGTCTCTATGTGTT+AGG | - | chr6_3:94128871-94128890 | None:intergenic | 40.0% | |
| ! | TTTCAGGTCAAAACGAGGTT+TGG | - | chr6_3:94128969-94128988 | None:intergenic | 40.0% |
| GCCAGTCAATTATTGAAGTG+TGG | - | chr6_3:94129137-94129156 | None:intergenic | 40.0% | |
| GAATAGAAGGAGGTGAAACA+CGG | + | chr6_3:94129409-94129428 | Msa0966110:intron | 40.0% | |
| AAATCTCGCATCAGATCGAA+AGG | + | chr6_3:94129468-94129487 | Msa0966110:intron | 40.0% | |
| AATCTCGCATCAGATCGAAA+GGG | + | chr6_3:94129469-94129488 | Msa0966110:intron | 40.0% | |
| AGATCGCAACCCAAAATTGA+AGG | + | chr6_3:94129514-94129533 | Msa0966110:intron | 40.0% | |
| TAAACATAAACGACTCAGCC+AGG | + | chr6_3:94129799-94129818 | Msa0966110:intron | 40.0% | |
| !! | CCAGGATCTTTAGAATCGTA+CGG | + | chr6_3:94129817-94129836 | Msa0966110:intron | 40.0% |
| TCGCATGAAAACGTGAAATC+GGG | - | chr6_3:94129848-94129867 | None:intergenic | 40.0% | |
| ! | GTTTTCATGCGATTTCACAG+CGG | + | chr6_3:94129856-94129875 | Msa0966110:intron | 40.0% |
| TCAGGATTCTATTCACGATC+CGG | + | chr6_3:94129890-94129909 | Msa0966110:intron | 40.0% | |
| ATTCTATTCACGATCCGGAT+CGG | + | chr6_3:94129895-94129914 | Msa0966110:intron | 40.0% | |
| TATCCATTCCGAGAAAACTG+AGG | + | chr6_3:94130131-94130150 | Msa0966110:CDS | 40.0% | |
| ! | GTCATGTTCCTCAGTTTTCT+CGG | - | chr6_3:94130142-94130161 | None:intergenic | 40.0% |
| AAACTGAGGAACATGACACA+AGG | + | chr6_3:94130145-94130164 | Msa0966110:CDS | 40.0% | |
| AACATGACACAAGGAAATCC+TGG | + | chr6_3:94130154-94130173 | Msa0966110:CDS | 40.0% | |
| GAAGGCTGTACATTCAACAA+AGG | + | chr6_3:94130206-94130225 | Msa0966110:CDS | 40.0% | |
| !! | GATTTTGAAAGCAAGACGGA+AGG | + | chr6_3:94130364-94130383 | Msa0966110:CDS | 40.0% |
| TAGATGATCCAAAGAAGTGG+TGG | + | chr6_3:94130539-94130558 | Msa0966110:CDS | 40.0% | |
| AGATGATCCAAAGAAGTGGT+GGG | + | chr6_3:94130540-94130559 | Msa0966110:CDS | 40.0% | |
| TTTCGTGATAGCAAACGCAA+TGG | + | chr6_3:94130565-94130584 | Msa0966110:CDS | 40.0% | |
| TGATAGCAAACGCAATGGAT+CGG | + | chr6_3:94130570-94130589 | Msa0966110:CDS | 40.0% | |
| AGGATGGAAATGTTTCCATC+TGG | + | chr6_3:94130706-94130725 | Msa0966110:CDS | 40.0% | |
| ! | GTTTGTTTGGGTTTAACAGG+CGG | - | chr6_3:94130789-94130808 | None:intergenic | 40.0% |
| ! | GTTTTGCAGCAAATCATTCC+AGG | - | chr6_3:94132229-94132248 | None:intergenic | 40.0% |
| CTATTATCCCACCATTTAGC+TGG | - | chr6_3:94132252-94132271 | None:intergenic | 40.0% | |
| GTGGGATAATAGAGTAGACA+AGG | + | chr6_3:94132260-94132279 | Msa0966110:CDS | 40.0% | |
| CCCAAAGACAAAGCAGAATA+TGG | - | chr6_3:94132291-94132310 | None:intergenic | 40.0% | |
| TCAGAAATATGCAAGAGCTC+CGG | + | chr6_3:94132386-94132405 | Msa0966110:intron | 40.0% | |
| AGTCTAGATGAAACCCAACT+TGG | - | chr6_3:94132459-94132478 | None:intergenic | 40.0% | |
| ATCTAGACTGAAAGAACTGG+AGG | + | chr6_3:94132470-94132489 | Msa0966110:CDS | 40.0% | |
| TTGGTTTAGGTGATGAATCC+TGG | + | chr6_3:94132874-94132893 | Msa0966110:intron | 40.0% | |
| TGCTGCAAAATCCAGCTAAA+TGG | + | chr6_3:94132904-94132923 | Msa0966110:CDS | 40.0% | |
| TGCAAAATCCAGCTAAATGG+TGG | + | chr6_3:94132907-94132926 | Msa0966110:CDS | 40.0% | |
| GCAAAATCCAGCTAAATGGT+GGG | + | chr6_3:94132908-94132927 | Msa0966110:CDS | 40.0% | |
| CTATTATCCCACCATTTAGC+TGG | - | chr6_3:94132252-94132271 | None:intergenic | 40.0% | |
| ! | ACCACATTTTCTGCTGTCAT+TGG | + | chr6_3:94132951-94132970 | Msa0966110:intron | 40.0% |
| ACCAATGACAGCAGAAAATG+TGG | - | chr6_3:94132955-94132974 | None:intergenic | 40.0% | |
| GTGTCTTTGTGCTTGAAATC+GGG | - | chr6_3:94133071-94133090 | None:intergenic | 40.0% | |
| GGTGTCTTTGTGCTTGAAAT+CGG | - | chr6_3:94133072-94133091 | None:intergenic | 40.0% | |
| GATTTCAAGCACAAAGACAC+CGG | + | chr6_3:94133071-94133090 | Msa0966110:CDS | 40.0% | |
| !! | AATTTTGGCAACACCCAACT+TGG | - | chr6_3:94133122-94133141 | None:intergenic | 40.0% |
| !! | CTTTGTTGTTTCGGCTTCAA+CGG | - | chr6_3:94133149-94133168 | None:intergenic | 40.0% |
| AACAAAGTGCAGAAACTAGC+TGG | + | chr6_3:94133162-94133181 | Msa0966110:CDS | 40.0% | |
| CTGAAGTCGTTTACCAAGTT+CGG | + | chr6_3:94133232-94133251 | Msa0966110:three_prime_UTR | 40.0% | |
| GTAAGAAGATACACCGAACT+TGG | - | chr6_3:94133248-94133267 | None:intergenic | 40.0% | |
| ! | ACTTGCATTTGGGAGGGTTT+TGG | + | chr6_3:94126439-94126458 | Msa0966110:CDS | 45.0% |
| GGAGTAAAACTCGCCGTATT+GGG | - | chr6_3:94126496-94126515 | None:intergenic | 45.0% | |
| AGGAGTAAAACTCGCCGTAT+TGG | - | chr6_3:94126497-94126516 | None:intergenic | 45.0% | |
| TTTGCAAATGGTGGTTGTGG+CGG | - | chr6_3:94126555-94126574 | None:intergenic | 45.0% | |
| !! | ACCAATTAGGTTGACGGAGT+TGG | - | chr6_3:94126633-94126652 | None:intergenic | 45.0% |
| ACTGAGAAGGATCATGACCA+AGG | - | chr6_3:94126727-94126746 | None:intergenic | 45.0% | |
| TGAGGGTCAACTTTCTACTG+AGG | + | chr6_3:94126826-94126845 | Msa0966110:CDS | 45.0% | |
| TTGTTGTCAGACACCGAACA+TGG | + | chr6_3:94127147-94127166 | Msa0966110:intron | 45.0% | |
| ACATGTCAGTGTGTCTGTGT+CGG | - | chr6_3:94127219-94127238 | None:intergenic | 45.0% | |
| !! | GTGTTGTTGGTGTTGTTGCT+AGG | + | chr6_3:94127400-94127419 | Msa0966110:intron | 45.0% |
| AAAGCAGCCTTCTTAACACG+AGG | - | chr6_3:94127461-94127480 | None:intergenic | 45.0% | |
| !! | AGTTTTGTCCCACTAAGTGG+GGG | - | chr6_3:94127741-94127760 | None:intergenic | 45.0% |
| ! | CTATGAGGCTTTAGCGAAGT+TGG | - | chr6_3:94128314-94128333 | None:intergenic | 45.0% |
| CAAAGTAGCTTCACAGAAGC+TGG | - | chr6_3:94128611-94128630 | None:intergenic | 45.0% | |
| CAAAAGCAGGTACAACCGAA+TGG | - | chr6_3:94128757-94128776 | None:intergenic | 45.0% | |
| CCCTATACAACTGCAAAAGC+AGG | - | chr6_3:94128770-94128789 | None:intergenic | 45.0% | |
| !! | AAGGTCCTTAAAAAGTGCCC+TGG | + | chr6_3:94129350-94129369 | Msa0966110:intron | 45.0% |
| !! | AGGTCCTTAAAAAGTGCCCT+GGG | + | chr6_3:94129351-94129370 | Msa0966110:intron | 45.0% |
| ATCTCGCATCAGATCGAAAG+GGG | + | chr6_3:94129470-94129489 | Msa0966110:intron | 45.0% | |
| TTGGTAGGATCGTTCGATCT+TGG | - | chr6_3:94129605-94129624 | None:intergenic | 45.0% | |
| ! | CCGTACGATTCTAAAGATCC+TGG | - | chr6_3:94129820-94129839 | None:intergenic | 45.0% |
| ! | ACAGCGGTTTTACTCAACTC+AGG | + | chr6_3:94129872-94129891 | Msa0966110:intron | 45.0% |
| ! | GTTCCTCAGTTTTCTCGGAA+TGG | - | chr6_3:94130137-94130156 | None:intergenic | 45.0% |
| TGACACAAGGAAATCCTGGA+AGG | + | chr6_3:94130158-94130177 | Msa0966110:CDS | 45.0% | |
| ! | TGTACAGCCTTCCATTGACT+GGG | - | chr6_3:94130198-94130217 | None:intergenic | 45.0% |
| ATGTACAGCCTTCCATTGAC+TGG | - | chr6_3:94130199-94130218 | None:intergenic | 45.0% | |
| !!! | CTCTGGCTCTTTTCGTTGTT+TGG | + | chr6_3:94130429-94130448 | Msa0966110:intron | 45.0% |
| CCAAGGACTTGACAAATAGG+CGG | - | chr6_3:94130509-94130528 | None:intergenic | 45.0% | |
| CGCCTATTTGTCAAGTCCTT+GGG | + | chr6_3:94130507-94130526 | Msa0966110:CDS | 45.0% | |
| GCCTATTTGTCAAGTCCTTG+GGG | + | chr6_3:94130508-94130527 | Msa0966110:CDS | 45.0% | |
| CGAAAATCCCACCACTTCTT+TGG | - | chr6_3:94130550-94130569 | None:intergenic | 45.0% | |
| ! | TGTTTCCATCTGGCTTGACA+AGG | + | chr6_3:94130716-94130735 | Msa0966110:CDS | 45.0% |
| AGAAACGGAAAACGGACATG+AGG | - | chr6_3:94132143-94132162 | None:intergenic | 45.0% | |
| TTGGTTTAGGTGATGAGTCC+TGG | + | chr6_3:94132208-94132227 | Msa0966110:intron | 45.0% | |
| TGCTGCAAAACCCAGCTAAA+TGG | + | chr6_3:94132238-94132257 | Msa0966110:CDS | 45.0% | |
| TGCAAAACCCAGCTAAATGG+TGG | + | chr6_3:94132241-94132260 | Msa0966110:CDS | 45.0% | |
| GCAAAACCCAGCTAAATGGT+GGG | + | chr6_3:94132242-94132261 | Msa0966110:CDS | 45.0% | |
| !! | AAGATACTGGTTTAGGGCTG+TGG | + | chr6_3:94132421-94132440 | Msa0966110:CDS | 45.0% |
| GCTCAGAGATTCACCAAGTT+GGG | + | chr6_3:94132443-94132462 | Msa0966110:CDS | 45.0% | |
| GTTGGTACAGAGATTCTCAG+TGG | + | chr6_3:94132595-94132614 | Msa0966110:intron | 45.0% | |
| ! | TGCTTGAAATCGGGTCCTTT+TGG | - | chr6_3:94133062-94133081 | None:intergenic | 45.0% |
| GCTTAGAGGTTCACCAAGTT+GGG | + | chr6_3:94133106-94133125 | Msa0966110:CDS | 45.0% | |
| !!! | TACTATATATTTTTTTTTTT+TGG | + | chr6_3:94130935-94130954 | Msa0966110:intron | 5.0% |
| !!! | ACTATATATTTTTTTTTTTT+GGG | + | chr6_3:94130936-94130955 | Msa0966110:intron | 5.0% |
| !!! | TAAGTAAATTTTTTTTTTAT+AGG | + | chr6_3:94131395-94131414 | Msa0966110:intron | 5.0% |
| !!! | AAGTAAATTTTTTTTTTATA+GGG | + | chr6_3:94131396-94131415 | Msa0966110:intron | 5.0% |
| !!! | TATAAGTAAATTTTTTTTAT+AGG | + | chr6_3:94131958-94131977 | Msa0966110:intron | 5.0% |
| !!! | ATAAGTAAATTTTTTTTATA+GGG | + | chr6_3:94131959-94131978 | Msa0966110:intron | 5.0% |
| !! | AGTAGTTGGTGGTGGTGGAT+CGG | - | chr6_3:94126526-94126545 | None:intergenic | 50.0% |
| GGTTGGAATGGGATTTCGGT+TGG | - | chr6_3:94126602-94126621 | None:intergenic | 50.0% | |
| !! | TGGCGAGTTTGGGTTGGAAT+GGG | - | chr6_3:94126613-94126632 | None:intergenic | 50.0% |
| !! | TTGGCGAGTTTGGGTTGGAA+TGG | - | chr6_3:94126614-94126633 | None:intergenic | 50.0% |
| TTGACGGAGTTGGCGAGTTT+GGG | - | chr6_3:94126623-94126642 | None:intergenic | 50.0% | |
| GCCAACTCCGTCAACCTAAT+TGG | + | chr6_3:94126629-94126648 | Msa0966110:CDS | 50.0% | |
| CACTTCCAAACTTCCACCGA+CGG | + | chr6_3:94126671-94126690 | Msa0966110:CDS | 50.0% | |
| GACACACTGACATGTGACAC+TGG | + | chr6_3:94127224-94127243 | Msa0966110:intron | 50.0% | |
| !! | GTGTTGGTGTCATGTCGTGT+CGG | + | chr6_3:94127290-94127309 | Msa0966110:intron | 50.0% |
| TGTCATGTCGTGTCGGATAC+AGG | + | chr6_3:94127297-94127316 | Msa0966110:intron | 50.0% | |
| !! | GGTCCTTAAAAAGTGCCCTG+GGG | + | chr6_3:94129352-94129371 | Msa0966110:intron | 50.0% |
| !! | GTCCTTAAAAAGTGCCCTGG+GGG | + | chr6_3:94129353-94129372 | Msa0966110:intron | 50.0% |
| TATTCACGATCCGGATCGGT+AGG | + | chr6_3:94129899-94129918 | Msa0966110:intron | 50.0% | |
| ATTCACGATCCGGATCGGTA+GGG | + | chr6_3:94129900-94129919 | Msa0966110:intron | 50.0% | |
| GGCGGTGTATTTCTTTGCAC+TGG | - | chr6_3:94130491-94130510 | None:intergenic | 50.0% | |
| CCGCCTATTTGTCAAGTCCT+TGG | + | chr6_3:94130506-94130525 | Msa0966110:CDS | 50.0% | |
| GCCCCAAGGACTTGACAAAT+AGG | - | chr6_3:94130512-94130531 | None:intergenic | 50.0% | |
| ! | CGCTTGAAGTCAGGGTACTT+TGG | - | chr6_3:94130684-94130703 | None:intergenic | 50.0% |
| CATCCTTGCGCTTGAAGTCA+GGG | - | chr6_3:94130692-94130711 | None:intergenic | 50.0% | |
| GCTTGACAAGGCTCCAAAGT+CGG | + | chr6_3:94130728-94130747 | Msa0966110:CDS | 50.0% | |
| GGCTCAGAGATTCACCAAGT+TGG | + | chr6_3:94132442-94132461 | Msa0966110:CDS | 50.0% | |
| AAGCACAAAGACACCGGTGA+AGG | + | chr6_3:94133077-94133096 | Msa0966110:CDS | 50.0% | |
| AGCACAAAGACACCGGTGAA+GGG | + | chr6_3:94133078-94133097 | Msa0966110:CDS | 50.0% | |
| TCTAAGCCATAGCCCTTCAC+CGG | - | chr6_3:94133093-94133112 | None:intergenic | 50.0% | |
| GGCTTAGAGGTTCACCAAGT+TGG | + | chr6_3:94133105-94133124 | Msa0966110:CDS | 50.0% | |
| ! | GGCTTCAACGGTGGCAATTT+TGG | - | chr6_3:94133137-94133156 | None:intergenic | 50.0% |
| !! | TGTTGTTTCGGCTTCAACGG+TGG | - | chr6_3:94133146-94133165 | None:intergenic | 50.0% |
| GGAGGTGAAACAGAGAGAAC+TGG | - | chr6_3:94133270-94133289 | None:intergenic | 50.0% | |
| GTTGACGGAGTTGGCGAGTT+TGG | - | chr6_3:94126624-94126643 | None:intergenic | 55.0% | |
| AAGGCGAGTGATGACAGTGG+CGG | - | chr6_3:94126708-94126727 | None:intergenic | 55.0% | |
| ACCAAGGCGAGTGATGACAG+TGG | - | chr6_3:94126711-94126730 | None:intergenic | 55.0% | |
| TTGTCCCACTAAGTGGGGGT+CGG | - | chr6_3:94127737-94127756 | None:intergenic | 55.0% | |
| !! | TGCCCCCAGGGCACTTTTTA+AGG | - | chr6_3:94129358-94129377 | None:intergenic | 55.0% |
| CGCATCAGATCGAAAGGGGA+TGG | + | chr6_3:94129474-94129493 | Msa0966110:intron | 55.0% | |
| TTCACGATCCGGATCGGTAG+GGG | + | chr6_3:94129901-94129920 | Msa0966110:intron | 55.0% | |
| TTCACTCACCCCTACCGATC+CGG | - | chr6_3:94129912-94129931 | None:intergenic | 55.0% | |
| TCATCTAGAAGGTCGCCCCA+AGG | - | chr6_3:94130526-94130545 | None:intergenic | 55.0% | |
| GTACCCTGACTTCAAGCGCA+AGG | + | chr6_3:94130686-94130705 | Msa0966110:CDS | 55.0% | |
| CCATCCTTGCGCTTGAAGTC+AGG | - | chr6_3:94130693-94130712 | None:intergenic | 55.0% | |
| CCTGACTTCAAGCGCAAGGA+TGG | + | chr6_3:94130690-94130709 | Msa0966110:CDS | 55.0% | |
| ! | TGGAGCCTTGTCAAGCCAGA+TGG | - | chr6_3:94130724-94130743 | None:intergenic | 55.0% |
| AAGACACCGGTGAAGGGCTA+TGG | + | chr6_3:94133084-94133103 | Msa0966110:CDS | 55.0% | |
| GGTGAAGGGCTATGGCTTAG+AGG | + | chr6_3:94133092-94133111 | Msa0966110:CDS | 55.0% | |
| !! | TGGTGGTGGTGGATCGGAGA+CGG | - | chr6_3:94126520-94126539 | None:intergenic | 60.0% |
| !! | GGTGGAGTAGTTGGTGGTGG+TGG | - | chr6_3:94126531-94126550 | None:intergenic | 60.0% |
| GCAAATGGTGGTTGTGGCGG+CGG | - | chr6_3:94126552-94126571 | None:intergenic | 60.0% | |
| CGGAGTTGGCGAGTTTGGGT+TGG | - | chr6_3:94126619-94126638 | None:intergenic | 60.0% | |
| GGTTGCCGTCGGTGGAAGTT+TGG | - | chr6_3:94126679-94126698 | None:intergenic | 60.0% | |
| TGATGACAGTGGCGGCGGAA+GGG | - | chr6_3:94126700-94126719 | None:intergenic | 60.0% | |
| GCCACTGTCATCACTCGCCT+TGG | + | chr6_3:94126707-94126726 | Msa0966110:CDS | 60.0% | |
| CTAAGTGGGGGTCGGCTACA+TGG | - | chr6_3:94127729-94127748 | None:intergenic | 60.0% | |
| TGTAGCCGACCCCCACTTAG+TGG | + | chr6_3:94127729-94127748 | Msa0966110:intron | 60.0% | |
| GTAGCCGACCCCCACTTAGT+GGG | + | chr6_3:94127730-94127749 | Msa0966110:intron | 60.0% | |
| AATGCTAGCGAGTGCCCCCA+GGG | - | chr6_3:94129370-94129389 | None:intergenic | 60.0% | |
| AAATGCTAGCGAGTGCCCCC+AGG | - | chr6_3:94129371-94129390 | None:intergenic | 60.0% | |
| !! | TGGTGGTGGATCGGAGACGG+AGG | - | chr6_3:94126517-94126536 | None:intergenic | 65.0% |
| !! | GGCGGTGGAGTAGTTGGTGG+TGG | - | chr6_3:94126534-94126553 | None:intergenic | 65.0% |
| TGTGGCGGCGGTGGAGTAGT+TGG | - | chr6_3:94126540-94126559 | None:intergenic | 65.0% | |
| AATGGTGGTTGTGGCGGCGG+TGG | - | chr6_3:94126549-94126568 | None:intergenic | 65.0% | |
| GTGATGACAGTGGCGGCGGA+AGG | - | chr6_3:94126701-94126720 | None:intergenic | 65.0% | |
| GCGAGTGATGACAGTGGCGG+CGG | - | chr6_3:94126705-94126724 | None:intergenic | 65.0% | |
| GGCGGCGGTGGAGTAGTTGG+TGG | - | chr6_3:94126537-94126556 | None:intergenic | 70.0% | |
| GGCGGAAGGGTTGCCGTCGG+TGG | - | chr6_3:94126687-94126706 | None:intergenic | 75.0% | |
| GGCGGCGGAAGGGTTGCCGT+CGG | - | chr6_3:94126690-94126709 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_3 | gene | 94126404 | 94133508 | 94126404 | ID=Msa0966110;Name=Msa0966110 |
| chr6_3 | mRNA | 94126404 | 94133508 | 94126404 | ID=Msa0966110-mRNA-1;Parent=Msa0966110;Name=Msa0966110-mRNA-1;_AED=0.08;_eAED=0.08;_QI=12|1|1|1|1|1|10|306|474 |
| chr6_3 | exon | 94126404 | 94126895 | 94126404 | ID=Msa0966110-mRNA-1:exon:17340;Parent=Msa0966110-mRNA-1 |
| chr6_3 | exon | 94127422 | 94127512 | 94127422 | ID=Msa0966110-mRNA-1:exon:17341;Parent=Msa0966110-mRNA-1 |
| chr6_3 | exon | 94130094 | 94130227 | 94130094 | ID=Msa0966110-mRNA-1:exon:17342;Parent=Msa0966110-mRNA-1 |
| chr6_3 | exon | 94130346 | 94130385 | 94130346 | ID=Msa0966110-mRNA-1:exon:17343;Parent=Msa0966110-mRNA-1 |
| chr6_3 | exon | 94130488 | 94130591 | 94130488 | ID=Msa0966110-mRNA-1:exon:17344;Parent=Msa0966110-mRNA-1 |
| chr6_3 | exon | 94130675 | 94130822 | 94130675 | ID=Msa0966110-mRNA-1:exon:17345;Parent=Msa0966110-mRNA-1 |
| chr6_3 | exon | 94132217 | 94132281 | 94132217 | ID=Msa0966110-mRNA-1:exon:17346;Parent=Msa0966110-mRNA-1 |
| chr6_3 | exon | 94132390 | 94132537 | 94132390 | ID=Msa0966110-mRNA-1:exon:17347;Parent=Msa0966110-mRNA-1 |
| chr6_3 | exon | 94132883 | 94132947 | 94132883 | ID=Msa0966110-mRNA-1:exon:17348;Parent=Msa0966110-mRNA-1 |
| chr6_3 | exon | 94133053 | 94133508 | 94133053 | ID=Msa0966110-mRNA-1:exon:17349;Parent=Msa0966110-mRNA-1 |
| chr6_3 | five_prime_UTR | 94126404 | 94126415 | 94126404 | ID=Msa0966110-mRNA-1:five_prime_utr;Parent=Msa0966110-mRNA-1 |
| chr6_3 | CDS | 94126416 | 94126895 | 94126416 | ID=Msa0966110-mRNA-1:cds;Parent=Msa0966110-mRNA-1 |
| chr6_3 | CDS | 94127422 | 94127512 | 94127422 | ID=Msa0966110-mRNA-1:cds;Parent=Msa0966110-mRNA-1 |
| chr6_3 | CDS | 94130094 | 94130227 | 94130094 | ID=Msa0966110-mRNA-1:cds;Parent=Msa0966110-mRNA-1 |
| chr6_3 | CDS | 94130346 | 94130385 | 94130346 | ID=Msa0966110-mRNA-1:cds;Parent=Msa0966110-mRNA-1 |
| chr6_3 | CDS | 94130488 | 94130591 | 94130488 | ID=Msa0966110-mRNA-1:cds;Parent=Msa0966110-mRNA-1 |
| chr6_3 | CDS | 94130675 | 94130822 | 94130675 | ID=Msa0966110-mRNA-1:cds;Parent=Msa0966110-mRNA-1 |
| chr6_3 | CDS | 94132217 | 94132281 | 94132217 | ID=Msa0966110-mRNA-1:cds;Parent=Msa0966110-mRNA-1 |
| chr6_3 | CDS | 94132390 | 94132537 | 94132390 | ID=Msa0966110-mRNA-1:cds;Parent=Msa0966110-mRNA-1 |
| chr6_3 | CDS | 94132883 | 94132947 | 94132883 | ID=Msa0966110-mRNA-1:cds;Parent=Msa0966110-mRNA-1 |
| chr6_3 | CDS | 94133053 | 94133202 | 94133053 | ID=Msa0966110-mRNA-1:cds;Parent=Msa0966110-mRNA-1 |
| chr6_3 | three_prime_UTR | 94133203 | 94133508 | 94133203 | ID=Msa0966110-mRNA-1:three_prime_utr;Parent=Msa0966110-mRNA-1 |
| Gene Sequence |
| Protein sequence |
