Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1085850 | XP_003603496.1 | 99.690 | 323 | 1 | 0 | 1 | 323 | 1 | 323 | 0.0 | 644 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1085850 | sp|P50346|RLA0_SOYBN | 90.938 | 320 | 28 | 1 | 1 | 320 | 1 | 319 | 0.0 | 526 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1085850 | G7JC94 | 99.690 | 323 | 1 | 0 | 1 | 323 | 1 | 323 | 0.0 | 644 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0016340 | Msa1085850 | 0.810136 | 1.339429e-50 | -8.615850e-47 |
| Msa0028150 | Msa1085850 | 0.821875 | 3.199563e-53 | -8.615850e-47 |
| Msa0071760 | Msa1085850 | 0.904921 | 7.399143e-80 | -8.615850e-47 |
| Msa0075730 | Msa1085850 | 0.820866 | 5.468836e-53 | -8.615850e-47 |
| Msa0086160 | Msa1085850 | 0.903833 | 2.304498e-79 | -8.615850e-47 |
| Msa0089540 | Msa1085850 | 0.884405 | 1.973180e-71 | -8.615850e-47 |
| Msa0114600 | Msa1085850 | 0.891954 | 2.477911e-74 | -8.615850e-47 |
| Msa0116600 | Msa1085850 | 0.800477 | 1.415191e-48 | -8.615850e-47 |
| Msa0116690 | Msa1085850 | 0.811257 | 7.662253e-51 | -8.615850e-47 |
| Msa0602900 | Msa1085850 | 0.879474 | 1.210246e-69 | -8.615850e-47 |
| Msa0605890 | Msa1085850 | 0.820745 | 5.830399e-53 | -8.615850e-47 |
| Msa0609120 | Msa1085850 | 0.832999 | 6.861573e-56 | -8.615850e-47 |
| Msa0619230 | Msa1085850 | 0.806739 | 7.106930e-50 | -8.615850e-47 |
| Msa0621190 | Msa1085850 | 0.802404 | 5.701856e-49 | -8.615850e-47 |
| Msa0643960 | Msa1085850 | 0.882669 | 8.581201e-71 | -8.615850e-47 |
| Msa0663400 | Msa1085850 | 0.871504 | 6.499320e-67 | -8.615850e-47 |
| Msa0686660 | Msa1085850 | 0.814012 | 1.913074e-51 | -8.615850e-47 |
| Msa0694400 | Msa1085850 | 0.834335 | 3.181407e-56 | -8.615850e-47 |
| Msa0708630 | Msa1085850 | 0.886665 | 2.805970e-72 | -8.615850e-47 |
| Msa0715970 | Msa1085850 | 0.808996 | 2.353655e-50 | -8.615850e-47 |
| Msa0741510 | Msa1085850 | 0.823512 | 1.330781e-53 | -8.615850e-47 |
| Msa0748350 | Msa1085850 | 0.813597 | 2.362058e-51 | -8.615850e-47 |
| Msa0790450 | Msa1085850 | 0.866039 | 3.814720e-65 | -8.615850e-47 |
| Msa0798590 | Msa1085850 | 0.863322 | 2.703226e-64 | -8.615850e-47 |
| Msa0812240 | Msa1085850 | 0.834464 | 2.953318e-56 | -8.615850e-47 |
| Msa0123290 | Msa1085850 | 0.824928 | 6.187465e-54 | -8.615850e-47 |
| Msa0123790 | Msa1085850 | 0.814097 | 1.832798e-51 | -8.615850e-47 |
| Msa0132460 | Msa1085850 | 0.885775 | 6.079381e-72 | -8.615850e-47 |
| Msa0134580 | Msa1085850 | 0.816122 | 6.507795e-52 | -8.615850e-47 |
| Msa0144800 | Msa1085850 | 0.803602 | 3.224141e-49 | -8.615850e-47 |
| Msa0167860 | Msa1085850 | 0.833360 | 5.577275e-56 | -8.615850e-47 |
| Msa0182050 | Msa1085850 | 0.882430 | 1.049002e-70 | -8.615850e-47 |
| Msa0182100 | Msa1085850 | 0.904958 | 7.120617e-80 | -8.615850e-47 |
| Msa0188740 | Msa1085850 | 0.864957 | 8.362743e-65 | -8.615850e-47 |
| Msa0192300 | Msa1085850 | 0.854442 | 1.227566e-61 | -8.615850e-47 |
| Msa0192490 | Msa1085850 | 0.817628 | 2.987817e-52 | -8.615850e-47 |
| Msa0220410 | Msa1085850 | -0.802712 | 4.924834e-49 | -8.615850e-47 |
| Msa0223240 | Msa1085850 | 0.813151 | 2.959740e-51 | -8.615850e-47 |
| Msa0237180 | Msa1085850 | 0.816027 | 6.831735e-52 | -8.615850e-47 |
| Msa0370350 | Msa1085850 | -0.816529 | 5.277599e-52 | -8.615850e-47 |
| Msa0371490 | Msa1085850 | 0.854149 | 1.492165e-61 | -8.615850e-47 |
| Msa0373350 | Msa1085850 | 0.808255 | 3.387855e-50 | -8.615850e-47 |
| Msa0377370 | Msa1085850 | 0.897722 | 1.067154e-76 | -8.615850e-47 |
| Msa0383690 | Msa1085850 | 0.813885 | 2.041085e-51 | -8.615850e-47 |
| Msa0388250 | Msa1085850 | 0.803182 | 3.938306e-49 | -8.615850e-47 |
| Msa0388520 | Msa1085850 | 0.820322 | 7.291978e-53 | -8.615850e-47 |
| Msa0417850 | Msa1085850 | -0.830187 | 3.381334e-55 | -8.615850e-47 |
| Msa0419710 | Msa1085850 | 0.823526 | 1.320889e-53 | -8.615850e-47 |
| Msa0426250 | Msa1085850 | 0.812201 | 4.775694e-51 | -8.615850e-47 |
| Msa0426940 | Msa1085850 | 0.838232 | 3.250539e-57 | -8.615850e-47 |
| Msa0432750 | Msa1085850 | 0.802540 | 5.345438e-49 | -8.615850e-47 |
| Msa0433060 | Msa1085850 | 0.992343 | 1.013830e-192 | -8.615850e-47 |
| Msa0450150 | Msa1085850 | 0.867382 | 1.426491e-65 | -8.615850e-47 |
| Msa0469740 | Msa1085850 | 0.810501 | 1.117189e-50 | -8.615850e-47 |
| Msa0476730 | Msa1085850 | -0.800734 | 1.254370e-48 | -8.615850e-47 |
| Msa0479980 | Msa1085850 | 0.809367 | 1.959395e-50 | -8.615850e-47 |
| Msa1004780 | Msa1085850 | 0.819697 | 1.013414e-52 | -8.615850e-47 |
| Msa1025200 | Msa1085850 | 0.845538 | 3.815608e-59 | -8.615850e-47 |
| Msa1025220 | Msa1085850 | 0.841247 | 5.333266e-58 | -8.615850e-47 |
| Msa1026710 | Msa1085850 | 0.854679 | 1.048356e-61 | -8.615850e-47 |
| Msa1031740 | Msa1085850 | 0.852790 | 3.664203e-61 | -8.615850e-47 |
| Msa1047020 | Msa1085850 | 0.826296 | 2.932963e-54 | -8.615850e-47 |
| Msa1050100 | Msa1085850 | 0.824545 | 7.615473e-54 | -8.615850e-47 |
| Msa1068660 | Msa1085850 | 0.819378 | 1.198871e-52 | -8.615850e-47 |
| Msa1070810 | Msa1085850 | 0.903451 | 3.421482e-79 | -8.615850e-47 |
| Msa1079910 | Msa1085850 | 0.800681 | 1.285932e-48 | -8.615850e-47 |
| Msa1085850 | Msa1115190 | 0.855201 | 7.392445e-62 | -8.615850e-47 |
| Msa1085850 | Msa1116940 | 0.830569 | 2.728322e-55 | -8.615850e-47 |
| Msa1085850 | Msa1118790 | 0.877656 | 5.273772e-69 | -8.615850e-47 |
| Msa1085850 | Msa1126690 | 0.839899 | 1.202137e-57 | -8.615850e-47 |
| Msa1085850 | Msa1130680 | 0.857088 | 2.070749e-62 | -8.615850e-47 |
| Msa1085850 | Msa1131030 | 0.807644 | 4.569625e-50 | -8.615850e-47 |
| Msa1085850 | Msa1136880 | 0.864185 | 1.458179e-64 | -8.615850e-47 |
| Msa1085850 | Msa1144610 | 0.817657 | 2.943214e-52 | -8.615850e-47 |
| Msa1085850 | Msa1158630 | 0.901232 | 3.298704e-78 | -8.615850e-47 |
| Msa1085850 | Msa1163980 | 0.843866 | 1.076296e-58 | -8.615850e-47 |
| Msa1085850 | Msa1165210 | 0.872874 | 2.273359e-67 | -8.615850e-47 |
| Msa1085850 | Msa1166670 | 0.804780 | 1.832513e-49 | -8.615850e-47 |
| Msa1085850 | Msa1219760 | 0.865043 | 7.860885e-65 | -8.615850e-47 |
| Msa1085850 | Msa1221370 | -0.813452 | 2.541812e-51 | -8.615850e-47 |
| Msa1085850 | Msa1235950 | 0.865147 | 7.288535e-65 | -8.615850e-47 |
| Msa1085850 | Msa1235980 | 0.859466 | 4.056687e-63 | -8.615850e-47 |
| Msa1085850 | Msa1237040 | 0.840079 | 1.079181e-57 | -8.615850e-47 |
| Msa1085850 | Msa1255830 | 0.824449 | 8.025710e-54 | -8.615850e-47 |
| Msa1085850 | Msa1255850 | 0.817410 | 3.346029e-52 | -8.615850e-47 |
| Msa1085850 | Msa1284060 | 0.825337 | 4.952063e-54 | -8.615850e-47 |
| Msa1085850 | Msa1296090 | 0.822899 | 1.850891e-53 | -8.615850e-47 |
| Msa1085850 | Msa1316100 | 0.839462 | 1.561897e-57 | -8.615850e-47 |
| Msa1085850 | Msa1317390 | 0.820264 | 7.518399e-53 | -8.615850e-47 |
| Msa1085850 | Msa1333370 | 0.819322 | 1.234243e-52 | -8.615850e-47 |
| Msa1085850 | Msa1341780 | 0.889942 | 1.540411e-73 | -8.615850e-47 |
| Msa1085850 | Msa1347610 | 0.872600 | 2.808655e-67 | -8.615850e-47 |
| Msa1085850 | Msa1351020 | 0.837261 | 5.771195e-57 | -8.615850e-47 |
| Msa1085850 | Msa1351910 | 0.838711 | 2.444249e-57 | -8.615850e-47 |
| Msa1085850 | Msa1353300 | 0.809578 | 1.765920e-50 | -8.615850e-47 |
| Msa1085850 | Msa1367540 | 0.844627 | 6.724126e-59 | -8.615850e-47 |
| Msa1085850 | Msa1371410 | 0.804593 | 2.005483e-49 | -8.615850e-47 |
| Msa1085850 | Msa1385480 | 0.848286 | 6.752812e-60 | -8.615850e-47 |
| Msa1085850 | Msa1390760 | 0.810258 | 1.260632e-50 | -8.615850e-47 |
| Msa1085850 | Msa1403520 | 0.867285 | 1.532084e-65 | -8.615850e-47 |
| Msa1085850 | Msa1407550 | 0.825189 | 5.369508e-54 | -8.615850e-47 |
| Msa1085850 | Msa1415620 | 0.804846 | 1.775687e-49 | -8.615850e-47 |
| Msa1085850 | Msa1421510 | 0.834264 | 3.314090e-56 | -8.615850e-47 |
| Msa1085850 | Msa1424570 | 0.827511 | 1.502558e-54 | -8.615850e-47 |
| Msa1085850 | Msa1425070 | 0.808055 | 3.737492e-50 | -8.615850e-47 |
| Msa1085850 | Msa1446510 | 0.816636 | 4.994041e-52 | -8.615850e-47 |
| Msa1085850 | Msa1450560 | 0.861819 | 7.848670e-64 | -8.615850e-47 |
| Msa1085850 | Msa1462580 | 0.858412 | 8.385720e-63 | -8.615850e-47 |
| Msa1085850 | Msa1465700 | 0.837167 | 6.096886e-57 | -8.615850e-47 |
| Msa0270160 | Msa1085850 | 0.875465 | 3.016676e-68 | -8.615850e-47 |
| Msa0277600 | Msa1085850 | 0.876263 | 1.604067e-68 | -8.615850e-47 |
| Msa0278540 | Msa1085850 | 0.810424 | 1.160906e-50 | -8.615850e-47 |
| Msa0281330 | Msa1085850 | 0.822759 | 1.994558e-53 | -8.615850e-47 |
| Msa0281370 | Msa1085850 | 0.808896 | 2.471925e-50 | -8.615850e-47 |
| Msa0299540 | Msa1085850 | -0.800166 | 1.637363e-48 | -8.615850e-47 |
| Msa0301250 | Msa1085850 | 0.848637 | 5.398039e-60 | -8.615850e-47 |
| Msa0313060 | Msa1085850 | 0.878459 | 2.761814e-69 | -8.615850e-47 |
| Msa0315430 | Msa1085850 | 0.808020 | 3.802653e-50 | -8.615850e-47 |
| Msa0315660 | Msa1085850 | 0.812605 | 3.896923e-51 | -8.615850e-47 |
| Msa0340560 | Msa1085850 | 0.820439 | 6.855944e-53 | -8.615850e-47 |
| Msa0511760 | Msa1085850 | 0.823820 | 1.127612e-53 | -8.615850e-47 |
| Msa0521730 | Msa1085850 | 0.894891 | 1.609414e-75 | -8.615850e-47 |
| Msa0524680 | Msa1085850 | 0.991631 | 1.101746e-188 | -8.615850e-47 |
| Msa0547920 | Msa1085850 | 0.872030 | 4.347326e-67 | -8.615850e-47 |
| Msa0550490 | Msa1085850 | 0.887357 | 1.532497e-72 | -8.615850e-47 |
| Msa0552510 | Msa1085850 | 0.800454 | 1.430323e-48 | -8.615850e-47 |
| Msa0568380 | Msa1085850 | 0.815330 | 9.772227e-52 | -8.615850e-47 |
| Msa0573550 | Msa1085850 | 0.861703 | 8.516040e-64 | -8.615850e-47 |
| Msa0574780 | Msa1085850 | 0.807794 | 4.246564e-50 | -8.615850e-47 |
| Msa0581440 | Msa1085850 | -0.807807 | 4.220467e-50 | -8.615850e-47 |
| Msa0585570 | Msa1085850 | 0.870702 | 1.195468e-66 | -8.615850e-47 |
| Msa0587830 | Msa1085850 | 0.801331 | 9.471110e-49 | -8.615850e-47 |
| Msa0850520 | Msa1085850 | -0.813036 | 3.136127e-51 | -8.615850e-47 |
| Msa0929700 | Msa1085850 | 0.878933 | 1.879289e-69 | -8.615850e-47 |
| Msa0930100 | Msa1085850 | 0.844649 | 6.635443e-59 | -8.615850e-47 |
| Msa0930890 | Msa1085850 | 0.836395 | 9.594785e-57 | -8.615850e-47 |
| Msa0966110 | Msa1085850 | 0.801931 | 7.134824e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1085850 | MtrunA17_Chr3g0138631 | 99.690 | 323 | 1 | 0 | 1 | 323 | 1 | 323 | 0.0 | 644 |
| Msa1085850 | MtrunA17_Chr5g0436791 | 91.641 | 323 | 27 | 0 | 1 | 323 | 1 | 323 | 0.0 | 559 |
| Msa1085850 | MtrunA17_Chr1g0168061 | 100.000 | 81 | 0 | 0 | 243 | 323 | 1 | 81 | 7.70e-49 | 158 |
| Msa1085850 | MtrunA17_Chr7g0222411 | 68.269 | 104 | 32 | 1 | 11 | 113 | 7 | 110 | 7.37e-42 | 143 |
| Msa1085850 | MtrunA17_Chr7g0272291 | 68.539 | 89 | 27 | 1 | 11 | 98 | 7 | 95 | 2.52e-34 | 121 |
| Msa1085850 | MtrunA17_Chr3g0115971 | 54.630 | 108 | 27 | 2 | 63 | 169 | 8 | 94 | 1.73e-22 | 92.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1085850 | AT2G40010.1 | 84.112 | 321 | 47 | 1 | 1 | 321 | 1 | 317 | 0.0 | 523 |
| Msa1085850 | AT3G09200.1 | 89.493 | 276 | 29 | 0 | 3 | 278 | 2 | 277 | 1.48e-180 | 501 |
| Msa1085850 | AT3G11250.1 | 88.406 | 276 | 32 | 0 | 3 | 278 | 2 | 277 | 1.11e-178 | 497 |
| Msa1085850 | AT3G09200.2 | 78.623 | 276 | 26 | 1 | 3 | 278 | 2 | 244 | 5.26e-150 | 423 |
| Msa1085850 | AT1G25260.1 | 22.685 | 216 | 146 | 4 | 10 | 214 | 16 | 221 | 4.34e-11 | 62.4 |
Find 132 sgRNAs with CRISPR-Local
Find 218 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGAACTAAGATAGGTATTT+TGG | 0.121345 | 7_2:-86867297 | Msa1085850:five_prime_UTR |
| TCCTCCTTGGCAGCTGCAGC+AGG | 0.147360 | 7_2:+86864753 | None:intergenic |
| CAAACCCAGTGGGCCTAAAA+AGG | 0.215339 | 7_2:-86867185 | Msa1085850:five_prime_UTR |
| ATCTCAGACCTCTTTCTTCC+AGG | 0.252116 | 7_2:-86865385 | Msa1085850:intron |
| CAGCGTTGACAACAAGGATT+TGG | 0.257235 | 7_2:+86866868 | None:intergenic |
| GCCCCAGCTGCTGCTGCGTC+TGG | 0.268454 | 7_2:-86864783 | Msa1085850:CDS |
| CATGGTCACTTCACTTTCAT+TGG | 0.278087 | 7_2:-86865053 | Msa1085850:CDS |
| CACCAGACGCAGCAGCAGCT+GGG | 0.284716 | 7_2:+86864781 | None:intergenic |
| GTGACTTGTGTTTGCCTCCT+AGG | 0.293721 | 7_2:-86864501 | Msa1085850:three_prime_UTR |
| CCACCAGACGCAGCAGCAGC+TGG | 0.308640 | 7_2:+86864780 | None:intergenic |
| ATCGTAGTTCTGCTTCTTCT+CGG | 0.310851 | 7_2:+86866923 | None:intergenic |
| CACAGTACCCTTGTTAATCT+TGG | 0.311903 | 7_2:+86865279 | None:intergenic |
| TTGTAGCAAAGTTTGCTATT+GGG | 0.333543 | 7_2:-86865081 | Msa1085850:CDS |
| TCAAAACTTCAGAATGGTTT+GGG | 0.337661 | 7_2:+86867316 | None:intergenic |
| GATTAAAGAGAGGAAATTAA+AGG | 0.339368 | 7_2:+86867001 | None:intergenic |
| TTCAAAACTTCAGAATGGTT+TGG | 0.345461 | 7_2:+86867315 | None:intergenic |
| CTTGTAGCAAAGTTTGCTAT+TGG | 0.351992 | 7_2:-86865082 | Msa1085850:CDS |
| TCTTCATCAGACTCTTCTTC+AGG | 0.361468 | 7_2:+86864714 | None:intergenic |
| GAGTTCGGTAGTCAAATTAC+TGG | 0.379800 | 7_2:-86864462 | Msa1085850:three_prime_UTR |
| GCTGCATTGCTTGCCAAGTT+AGG | 0.382522 | 7_2:-86865199 | Msa1085850:CDS |
| TCCTTAACCTTGTCTGCCTC+AGG | 0.389206 | 7_2:+86864935 | None:intergenic |
| GTTGAGAAAAGCATTGTTGC+CGG | 0.397292 | 7_2:+86866728 | None:intergenic |
| GTTCTGCTTCTTCTCGGCTT+TGG | 0.398033 | 7_2:+86866929 | None:intergenic |
| AGCTCCTGCTCGTGTTGGTT+TGG | 0.398892 | 7_2:-86865457 | Msa1085850:CDS |
| CTCCTTGGCAGCTGCAGCAG+GGG | 0.398915 | 7_2:+86864755 | None:intergenic |
| TTCCTTCTTTGCCTCCTCCT+TGG | 0.403009 | 7_2:+86864740 | None:intergenic |
| AAAAGCAAGAACGTTCTTGT+AGG | 0.409408 | 7_2:+86864982 | None:intergenic |
| GGAGGAACAACGACATCAAT+TGG | 0.410263 | 7_2:+86865429 | None:intergenic |
| TGCCCCTGCTGCAGCTGCCA+AGG | 0.415195 | 7_2:-86864757 | Msa1085850:CDS |
| TACCCTTGTTAATCTTGGTT+GGG | 0.415505 | 7_2:+86865284 | None:intergenic |
| CCTCCTTGGCAGCTGCAGCA+GGG | 0.416133 | 7_2:+86864754 | None:intergenic |
| ACAGCTACAGCAAACTTACT+TGG | 0.421114 | 7_2:+86864810 | None:intergenic |
| GACATTGGTTTCGGTCTGTT+TGG | 0.422303 | 7_2:-86864693 | Msa1085850:CDS |
| TCTGATGAAGACATTGGTTT+CGG | 0.427250 | 7_2:-86864702 | Msa1085850:CDS |
| CCAGCTGCTGCTGCGTCTGG+TGG | 0.429030 | 7_2:-86864780 | Msa1085850:CDS |
| GGGTCGAGCCCTGTGTTGCC+TGG | 0.431244 | 7_2:+86865408 | None:intergenic |
| CCTTTCTTAATGAGTTCCAC+AGG | 0.432079 | 7_2:+86865244 | None:intergenic |
| TGCCTCAGGGAAAGAATATT+CGG | 0.435165 | 7_2:+86864949 | None:intergenic |
| TGGTGACTCCGTTGTTCTCA+TGG | 0.440885 | 7_2:-86866799 | Msa1085850:CDS |
| GAGAGAGAGTGAGCGTGAAA+TGG | 0.445704 | 7_2:+86867119 | None:intergenic |
| AGATTTCATGAGATCATACT+TGG | 0.450081 | 7_2:-86864617 | Msa1085850:three_prime_UTR |
| TCAGTGAGGTCAAGAACCTC+AGG | 0.450763 | 7_2:+86865112 | None:intergenic |
| AGAGTGAGCGTGAAATGGTT+GGG | 0.451243 | 7_2:+86867124 | None:intergenic |
| GACCACAAGCCCGTATGAAA+AGG | 0.451799 | 7_2:+86865168 | None:intergenic |
| AGCGTTGACAACAAGGATTT+GGG | 0.451933 | 7_2:+86866869 | None:intergenic |
| GAGAGTGAGCGTGAAATGGT+TGG | 0.454050 | 7_2:+86867123 | None:intergenic |
| AGAAAACTAACGACAAGAAG+AGG | 0.456056 | 7_2:+86866699 | None:intergenic |
| TGCTGCAGCTGCCAAGGAGG+AGG | 0.457641 | 7_2:-86864751 | Msa1085850:CDS |
| GCGTGAAATGGTTGGGAAGC+GGG | 0.460938 | 7_2:+86867131 | None:intergenic |
| CCCTGAGGCAGACAAGGTTA+AGG | 0.463407 | 7_2:-86864936 | Msa1085850:CDS |
| GATCATACTTGGTTCATTCT+CGG | 0.466035 | 7_2:-86864606 | Msa1085850:three_prime_UTR |
| TTTCACTAAAGGTGACTTGA+AGG | 0.469610 | 7_2:-86865813 | Msa1085850:CDS |
| ATTGATGTCGTTGTTCCTCC+AGG | 0.473267 | 7_2:-86865426 | Msa1085850:CDS |
| TCAGCTACAGAACATTCGTC+AGG | 0.474511 | 7_2:-86866829 | Msa1085850:CDS |
| TGCCAAGGAGGAGGCAAAGA+AGG | 0.475094 | 7_2:-86864742 | Msa1085850:CDS |
| TGTAGCAAAGTTTGCTATTG+GGG | 0.476436 | 7_2:-86865080 | Msa1085850:CDS |
| GAGGAGCAGCGGCAAGTGTT+GGG | 0.477710 | 7_2:+86865020 | None:intergenic |
| ATTAAAGAGAGGAAATTAAA+GGG | 0.479325 | 7_2:+86867002 | None:intergenic |
| TGAGGAGCAGCGGCAAGTGT+TGG | 0.489867 | 7_2:+86865019 | None:intergenic |
| TAGTCAAATTACTGGTGATT+CGG | 0.490669 | 7_2:-86864454 | Msa1085850:three_prime_UTR |
| CTTAGTTCAAAACTTCAGAA+TGG | 0.491518 | 7_2:+86867310 | None:intergenic |
| ACCAGACGCAGCAGCAGCTG+GGG | 0.494428 | 7_2:+86864782 | None:intergenic |
| GTTTGCTATTGGGGTTTCCA+TGG | 0.495280 | 7_2:-86865071 | Msa1085850:CDS |
| GTCCTCTCTGTTTATGACAA+TGG | 0.495884 | 7_2:-86865148 | Msa1085850:CDS |
| TGCTTGCCAAGTTAGGCATT+AGG | 0.501788 | 7_2:-86865192 | Msa1085850:CDS |
| CTTGACTGAACTATACGTCT+TGG | 0.501972 | 7_2:-86867025 | Msa1085850:five_prime_UTR |
| AGTCAAAATATAACATGGAA+TGG | 0.503032 | 7_2:+86864561 | None:intergenic |
| GGGTGTATTCATCGATAAGC+TGG | 0.506884 | 7_2:+86866889 | None:intergenic |
| GTACCCTTGTTAATCTTGGT+TGG | 0.507788 | 7_2:+86865283 | None:intergenic |
| GCAACCAAACCAACACGAGC+AGG | 0.521300 | 7_2:+86865453 | None:intergenic |
| CGTATGCACGCTGAGAAAAC+CGG | 0.521724 | 7_2:-86866747 | Msa1085850:CDS |
| AAAGGGCCTAATGCCTAACT+TGG | 0.523198 | 7_2:+86865186 | None:intergenic |
| TTTGGGAGTTAACTCTCAAT+CGG | 0.526599 | 7_2:+86867333 | None:intergenic |
| TTCTTTCCCTGAGGCAGACA+AGG | 0.529015 | 7_2:-86864942 | Msa1085850:CDS |
| CCCTGCTGCAGCTGCCAAGG+AGG | 0.530721 | 7_2:-86864754 | Msa1085850:CDS |
| TGCTTCTTCTCGGCTTTGGT+AGG | 0.531501 | 7_2:+86866933 | None:intergenic |
| ACCACAAGCCCGTATGAAAA+GGG | 0.531757 | 7_2:+86865169 | None:intergenic |
| GTTGGAGCTCCTGCTCGTGT+TGG | 0.532062 | 7_2:-86865462 | Msa1085850:CDS |
| TAGGCATTGACGAACATATG+AGG | 0.532355 | 7_2:+86865001 | None:intergenic |
| AGCGTGAAATGGTTGGGAAG+CGG | 0.536246 | 7_2:+86867130 | None:intergenic |
| TGGAAGAAAGAGGTCTGAGA+TGG | 0.537477 | 7_2:+86865387 | None:intergenic |
| GTGCTGAATCAGGGTAATGT+TGG | 0.549672 | 7_2:-86865842 | Msa1085850:intron |
| TAACGACAAGAAGAGGGATA+AGG | 0.557262 | 7_2:+86866706 | None:intergenic |
| ATTAAGAAAGGAGACAAGGT+TGG | 0.560082 | 7_2:-86865232 | Msa1085850:CDS |
| CCTGTGGAACTCATTAAGAA+AGG | 0.562398 | 7_2:-86865244 | Msa1085850:CDS |
| GTTGTTCCTCCAGGCAACAC+AGG | 0.564540 | 7_2:-86865417 | Msa1085850:CDS |
| CATCCCAACCAAGATTAACA+AGG | 0.566179 | 7_2:-86865287 | Msa1085850:CDS |
| CAATAGCAAACTTTGCTACA+AGG | 0.567134 | 7_2:+86865083 | None:intergenic |
| GAAGAGTCTGATGAAGACAT+TGG | 0.571608 | 7_2:-86864708 | Msa1085850:CDS |
| CTTTCTTAATGAGTTCCACA+GGG | 0.574196 | 7_2:+86865245 | None:intergenic |
| CGTTGTCAGCGTTGACAACA+AGG | 0.575399 | 7_2:+86866862 | None:intergenic |
| ATAACAAACCTGGAAGAAAG+AGG | 0.579894 | 7_2:+86865377 | None:intergenic |
| GGTGACTCCGTTGTTCTCAT+GGG | 0.580224 | 7_2:-86866798 | Msa1085850:CDS |
| ACGAACAGATCGCTTCATCA+TGG | 0.583200 | 7_2:+86866767 | None:intergenic |
| CAAATTAAAAGTTAAAACCT+AGG | 0.589132 | 7_2:+86864484 | None:intergenic |
| CCTTAACCTTGTCTGCCTCA+GGG | 0.589860 | 7_2:+86864936 | None:intergenic |
| GGAAGAAAGAGGTCTGAGAT+GGG | 0.590223 | 7_2:+86865388 | None:intergenic |
| CAGCTACAGCAAACTTACTT+GGG | 0.593694 | 7_2:+86864811 | None:intergenic |
| GGCAAGTGTTGGGTAAGAGA+TGG | 0.602128 | 7_2:+86865030 | None:intergenic |
| GAAAACTAACGACAAGAAGA+GGG | 0.606607 | 7_2:+86866700 | None:intergenic |
| TTTGGAAGGAACGAAACGAA+GGG | 0.608382 | 7_2:+86867079 | None:intergenic |
| GGGAGTTAACTCTCAATCGG+TGG | 0.609159 | 7_2:+86867336 | None:intergenic |
| AAAAGAGCAGGTTAAAGTGA+CGG | 0.611034 | 7_2:-86867058 | Msa1085850:five_prime_UTR |
| TTGTTCCTCCAGGCAACACA+GGG | 0.611479 | 7_2:-86865416 | Msa1085850:CDS |
| CAAGATTAACAAGGGTACTG+TGG | 0.615021 | 7_2:-86865278 | Msa1085850:CDS |
| AACAACAACAAAATCAACAA+TGG | 0.626124 | 7_2:-86866964 | Msa1085850:exon |
| TGAAGAAGTTGCTAAATACA+AGG | 0.626443 | 7_2:-86865783 | Msa1085850:intron |
| GACGAACATATGAGGAGCAG+CGG | 0.628131 | 7_2:+86865009 | None:intergenic |
| CAGCTACAGAACATTCGTCA+GGG | 0.630095 | 7_2:-86866828 | Msa1085850:CDS |
| GTTGTCAACGCTGACAACGT+TGG | 0.630374 | 7_2:-86866858 | Msa1085850:CDS |
| TGGTTCAGTGTTTAGCCCTG+AGG | 0.633517 | 7_2:-86865128 | Msa1085850:CDS |
| ATTAAAAGTTAAAACCTAGG+AGG | 0.636784 | 7_2:+86864487 | None:intergenic |
| GGGGCCGTGAGCAAAAGAAG+GGG | 0.640653 | 7_2:-86867264 | Msa1085850:five_prime_UTR |
| GATAAAGTCAAAATATAACA+TGG | 0.649347 | 7_2:+86864556 | None:intergenic |
| CAATGAAAGTGAAGTGACCA+TGG | 0.657879 | 7_2:+86865054 | None:intergenic |
| CAAGGTTAAGGAGTACCTGA+AGG | 0.661074 | 7_2:-86864924 | Msa1085850:intron |
| CAAGACGTATAGTTCAGTCA+AGG | 0.663107 | 7_2:+86867026 | None:intergenic |
| GTTCTTTCCCATGAGAACAA+CGG | 0.664224 | 7_2:+86866791 | None:intergenic |
| ATCCCAACCAAGATTAACAA+GGG | 0.664581 | 7_2:-86865286 | Msa1085850:CDS |
| AACATTCGTCAGGGTCTACG+TGG | 0.667957 | 7_2:-86866819 | Msa1085850:CDS |
| TGTGGAAATTATTACCCCTG+TGG | 0.672323 | 7_2:-86865260 | Msa1085850:CDS |
| ACTCATTAAGAAAGGAGACA+AGG | 0.674494 | 7_2:-86865236 | Msa1085850:CDS |
| TCGAGCCCTGTGTTGCCTGG+AGG | 0.687408 | 7_2:+86865411 | None:intergenic |
| TACCGAATATTCTTTCCCTG+AGG | 0.697745 | 7_2:-86864951 | Msa1085850:CDS |
| CAGTGAGGTCAAGAACCTCA+GGG | 0.701495 | 7_2:+86865113 | None:intergenic |
| TGAGGTTCTTGACCTCACTG+AGG | 0.710337 | 7_2:-86865110 | Msa1085850:CDS |
| AAACACTTAGCAAACCCAGT+GGG | 0.712309 | 7_2:-86867195 | Msa1085850:five_prime_UTR |
| AACCATTGTCATAAACAGAG+AGG | 0.717707 | 7_2:+86865146 | None:intergenic |
| GACGTATAGTTCAGTCAAGG+CGG | 0.717823 | 7_2:+86867029 | None:intergenic |
| TTTCTTAATGAGTTCCACAG+GGG | 0.725748 | 7_2:+86865246 | None:intergenic |
| CTACAAGGTCATCCTCAGTG+AGG | 0.743500 | 7_2:+86865098 | None:intergenic |
| AAAACACTTAGCAAACCCAG+TGG | 0.777128 | 7_2:-86867196 | Msa1085850:five_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTAAAAAAAAAAAAAAA+AGG | - | chr7_2:86867335-86867354 | Msa1085850:five_prime_UTR | 0.0% |
| !!! | AGTCTAACTTTATTTATAAT+GGG | - | chr7_2:86865249-86865268 | Msa1085850:CDS | 15.0% |
| !! | TATTATTTATAAGCTTATCA+AGG | + | chr7_2:86865394-86865413 | None:intergenic | 15.0% |
| !! | TAAGCTTATAAATAATACAT+AGG | - | chr7_2:86865397-86865416 | Msa1085850:CDS | 15.0% |
| !! | AAGCTTATAAATAATACATA+GGG | - | chr7_2:86865398-86865417 | Msa1085850:CDS | 15.0% |
| !! | AATCAAAGAATAAGAAAAAT+GGG | + | chr7_2:86866881-86866900 | None:intergenic | 15.0% |
| !! | AAATCAAAGAATAAGAAAAA+TGG | + | chr7_2:86866882-86866901 | None:intergenic | 15.0% |
| !!! | TTTAACTTTTAATTTGAGTT+CGG | - | chr7_2:86867251-86867270 | Msa1085850:five_prime_UTR | 15.0% |
| !! | ATTAAAGAGAGGAAATTAAA+GGG | + | chr7_2:86864729-86864748 | None:intergenic | 20.0% |
| !!! | CAGTCTAACTTTATTTATAA+TGG | - | chr7_2:86865248-86865267 | Msa1085850:CDS | 20.0% |
| !!! | GTCTAACTTTATTTATAATG+GGG | - | chr7_2:86865250-86865269 | Msa1085850:CDS | 20.0% |
| !! | TATGCAAATAAATAAGCTTA+TGG | + | chr7_2:86865641-86865660 | None:intergenic | 20.0% |
| !! | TAATTGTCTTAAATCTGAAT+AGG | - | chr7_2:86866244-86866263 | Msa1085850:intron | 20.0% |
| !! | GATAAAGTCAAAATATAACA+TGG | + | chr7_2:86867175-86867194 | None:intergenic | 20.0% |
| !!! | TTCTCGTTTTAAATTCTATA+TGG | - | chr7_2:86867200-86867219 | Msa1085850:five_prime_UTR | 20.0% |
| !! | CAAATTAAAAGTTAAAACCT+AGG | + | chr7_2:86867247-86867266 | None:intergenic | 20.0% |
| !! | TTGAACTAAGATAGGTATTT+TGG | - | chr7_2:86864431-86864450 | Msa1085850:three_prime_UTR | 25.0% |
| !! | TGAACTAAGATAGGTATTTT+GGG | - | chr7_2:86864432-86864451 | Msa1085850:three_prime_UTR | 25.0% |
| ! | GATTAAAGAGAGGAAATTAA+AGG | + | chr7_2:86864730-86864749 | None:intergenic | 25.0% |
| !!! | TGATTTTGTTGTTGTTGATA+GGG | + | chr7_2:86864760-86864779 | None:intergenic | 25.0% |
| !!! | TTGATTTTGTTGTTGTTGAT+AGG | + | chr7_2:86864761-86864780 | None:intergenic | 25.0% |
| ! | AACAACAACAAAATCAACAA+TGG | - | chr7_2:86864764-86864783 | Msa1085850:CDS | 25.0% |
| !! | TTTAGTGATTTTGTGTGATT+TGG | - | chr7_2:86865104-86865123 | Msa1085850:CDS | 25.0% |
| !!! | TTCTGTTTTTTGTTACGTAT+AGG | - | chr7_2:86865140-86865159 | Msa1085850:CDS | 25.0% |
| ! | TCTTTATGTTAATTCACAAG+TGG | - | chr7_2:86865326-86865345 | Msa1085850:intron | 25.0% |
| ! | CTTTATGTTAATTCACAAGT+GGG | - | chr7_2:86865327-86865346 | Msa1085850:intron | 25.0% |
| ! | AATTACTGCACTATATTATG+AGG | - | chr7_2:86865827-86865846 | Msa1085850:CDS | 25.0% |
| ! | ATATGTTATGTTGTTAAGCA+TGG | - | chr7_2:86865992-86866011 | Msa1085850:intron | 25.0% |
| ! | ATTTACAGAAATTGTAACGA+GGG | + | chr7_2:86866138-86866157 | None:intergenic | 25.0% |
| ! | TATTTACAGAAATTGTAACG+AGG | + | chr7_2:86866139-86866158 | None:intergenic | 25.0% |
| ! | TTAAAAGAAGATAACAAACC+TGG | + | chr7_2:86866364-86866383 | None:intergenic | 25.0% |
| ! | TTATGTTTATTCTCCACTTT+AGG | - | chr7_2:86866411-86866430 | Msa1085850:intron | 25.0% |
| !!! | ATAAGAAAAATGGGAGTATT+GGG | + | chr7_2:86866872-86866891 | None:intergenic | 25.0% |
| !! | AATAAGAAAAATGGGAGTAT+TGG | + | chr7_2:86866873-86866892 | None:intergenic | 25.0% |
| !!! | TTCTTTAGTTTTGCTATTAG+TGG | - | chr7_2:86867069-86867088 | Msa1085850:five_prime_UTR | 25.0% |
| ! | AGTCAAAATATAACATGGAA+TGG | + | chr7_2:86867170-86867189 | None:intergenic | 25.0% |
| ! | ATTAAAAGTTAAAACCTAGG+AGG | + | chr7_2:86867244-86867263 | None:intergenic | 25.0% |
| TCAAAACTTCAGAATGGTTT+GGG | + | chr7_2:86864415-86864434 | None:intergenic | 30.0% | |
| TTCAAAACTTCAGAATGGTT+TGG | + | chr7_2:86864416-86864435 | None:intergenic | 30.0% | |
| CTTAGTTCAAAACTTCAGAA+TGG | + | chr7_2:86864421-86864440 | None:intergenic | 30.0% | |
| !!! | CTGAAGTTTTGAACTAAGAT+AGG | - | chr7_2:86864423-86864442 | Msa1085850:three_prime_UTR | 30.0% |
| ! | GAACTAAGATAGGTATTTTG+GGG | - | chr7_2:86864433-86864452 | Msa1085850:three_prime_UTR | 30.0% |
| ! | GGCGCAAAGATTTTATATTA+GGG | + | chr7_2:86864579-86864598 | None:intergenic | 30.0% |
| TTCGCTGTTCGATTTAATAA+TGG | - | chr7_2:86865071-86865090 | Msa1085850:CDS | 30.0% | |
| AATAATACATAGGGTCTGTT+TGG | - | chr7_2:86865407-86865426 | Msa1085850:CDS | 30.0% | |
| TAGTGAGAACTTGTGAATTA+AGG | - | chr7_2:86865550-86865569 | Msa1085850:intron | 30.0% | |
| CAAAATAAGCTCAATCCAAA+CGG | - | chr7_2:86865613-86865632 | Msa1085850:intron | 30.0% | |
| AAAATAAGCTCAATCCAAAC+GGG | - | chr7_2:86865614-86865633 | Msa1085850:intron | 30.0% | |
| ! | TATTGTTGTTAACTCTTGTG+AGG | - | chr7_2:86865859-86865878 | Msa1085850:intron | 30.0% |
| !!! | GTTGGTTTGATTTTCACTAA+AGG | - | chr7_2:86865904-86865923 | Msa1085850:intron | 30.0% |
| TGAAGAAGTTGCTAAATACA+AGG | - | chr7_2:86865945-86865964 | Msa1085850:intron | 30.0% | |
| ACTAGAGGTGACAAAAAAAA+TGG | + | chr7_2:86866064-86866083 | None:intergenic | 30.0% | |
| ! | AATACTTTTCGTTTGATGCA+TGG | - | chr7_2:86866158-86866177 | Msa1085850:intron | 30.0% |
| CATTCAACAAACAAAACAAG+TGG | + | chr7_2:86866211-86866230 | None:intergenic | 30.0% | |
| TGTCTTAAATCTGAATAGGT+TGG | - | chr7_2:86866248-86866267 | Msa1085850:intron | 30.0% | |
| !! | TTGTAGCAAAGTTTGCTATT+GGG | - | chr7_2:86866647-86866666 | Msa1085850:intron | 30.0% |
| AGATTTCATGAGATCATACT+TGG | - | chr7_2:86867111-86867130 | Msa1085850:five_prime_UTR | 30.0% | |
| TAGTCAAATTACTGGTGATT+CGG | - | chr7_2:86867274-86867293 | Msa1085850:five_prime_UTR | 30.0% | |
| TTTGGGAGTTAACTCTCAAT+CGG | + | chr7_2:86864398-86864417 | None:intergenic | 35.0% | |
| ! | GGGCGCAAAGATTTTATATT+AGG | + | chr7_2:86864580-86864599 | None:intergenic | 35.0% |
| ! | TTTAACCTGCTCTTTTTGGA+AGG | + | chr7_2:86864666-86864685 | None:intergenic | 35.0% |
| ! | TCACTTTAACCTGCTCTTTT+TGG | + | chr7_2:86864670-86864689 | None:intergenic | 35.0% |
| AAAAGAGCAGGTTAAAGTGA+CGG | - | chr7_2:86864670-86864689 | Msa1085850:exon | 35.0% | |
| !!! | GGGTTTTGAAGATTAAAGAG+AGG | + | chr7_2:86864740-86864759 | None:intergenic | 35.0% |
| GAAAACTAACGACAAGAAGA+GGG | + | chr7_2:86865031-86865050 | None:intergenic | 35.0% | |
| AGAAAACTAACGACAAGAAG+AGG | + | chr7_2:86865032-86865051 | None:intergenic | 35.0% | |
| AAATAAGCTCAATCCAAACG+GGG | - | chr7_2:86865615-86865634 | Msa1085850:intron | 35.0% | |
| GCAATAACTGTCTCTTTGTT+TGG | + | chr7_2:86865743-86865762 | None:intergenic | 35.0% | |
| TTTCACTAAAGGTGACTTGA+AGG | - | chr7_2:86865915-86865934 | Msa1085850:intron | 35.0% | |
| !!! | TTTTTTTGTCACCTCTAGTG+AGG | - | chr7_2:86866065-86866084 | Msa1085850:intron | 35.0% |
| ATAACAAACCTGGAAGAAAG+AGG | + | chr7_2:86866354-86866373 | None:intergenic | 35.0% | |
| ATCCCAACCAAGATTAACAA+GGG | - | chr7_2:86866442-86866461 | Msa1085850:intron | 35.0% | |
| TACCCTTGTTAATCTTGGTT+GGG | + | chr7_2:86866447-86866466 | None:intergenic | 35.0% | |
| TTTCTTAATGAGTTCCACAG+GGG | + | chr7_2:86866485-86866504 | None:intergenic | 35.0% | |
| CTTTCTTAATGAGTTCCACA+GGG | + | chr7_2:86866486-86866505 | None:intergenic | 35.0% | |
| ACTCATTAAGAAAGGAGACA+AGG | - | chr7_2:86866492-86866511 | Msa1085850:intron | 35.0% | |
| ATTAAGAAAGGAGACAAGGT+TGG | - | chr7_2:86866496-86866515 | Msa1085850:intron | 35.0% | |
| AACCATTGTCATAAACAGAG+AGG | + | chr7_2:86866585-86866604 | None:intergenic | 35.0% | |
| CAATAGCAAACTTTGCTACA+AGG | + | chr7_2:86866648-86866667 | None:intergenic | 35.0% | |
| !! | CTTGTAGCAAAGTTTGCTAT+TGG | - | chr7_2:86866646-86866665 | Msa1085850:intron | 35.0% |
| !! | TGTAGCAAAGTTTGCTATTG+GGG | - | chr7_2:86866648-86866667 | Msa1085850:intron | 35.0% |
| AAAAGCAAGAACGTTCTTGT+AGG | + | chr7_2:86866749-86866768 | None:intergenic | 35.0% | |
| ATGTTGAAGTCAATACCTTC+AGG | + | chr7_2:86866822-86866841 | None:intergenic | 35.0% | |
| !! | CTTTGATTTTTGTTCACTGC+AGG | - | chr7_2:86866893-86866912 | Msa1085850:CDS | 35.0% |
| !! | TCTGATGAAGACATTGGTTT+CGG | - | chr7_2:86867026-86867045 | Msa1085850:five_prime_UTR | 35.0% |
| GATCATACTTGGTTCATTCT+CGG | - | chr7_2:86867122-86867141 | Msa1085850:five_prime_UTR | 35.0% | |
| !! | TAGGTATTTTGGGGAGTTTG+AGG | - | chr7_2:86864442-86864461 | Msa1085850:three_prime_UTR | 40.0% |
| !! | AGGTATTTTGGGGAGTTTGA+GGG | - | chr7_2:86864443-86864462 | Msa1085850:three_prime_UTR | 40.0% |
| AAAACACTTAGCAAACCCAG+TGG | - | chr7_2:86864532-86864551 | Msa1085850:three_prime_UTR | 40.0% | |
| AAACACTTAGCAAACCCAGT+GGG | - | chr7_2:86864533-86864552 | Msa1085850:three_prime_UTR | 40.0% | |
| !!! | AAACGAAGGGTTTTAGGGTT+CGG | + | chr7_2:86864639-86864658 | None:intergenic | 40.0% |
| ! | GAACGAAACGAAGGGTTTTA+GGG | + | chr7_2:86864644-86864663 | None:intergenic | 40.0% |
| TTTGGAAGGAACGAAACGAA+GGG | + | chr7_2:86864652-86864671 | None:intergenic | 40.0% | |
| !! | TTTTGGAAGGAACGAAACGA+AGG | + | chr7_2:86864653-86864672 | None:intergenic | 40.0% |
| CAAGACGTATAGTTCAGTCA+AGG | + | chr7_2:86864705-86864724 | None:intergenic | 40.0% | |
| CTTGACTGAACTATACGTCT+TGG | - | chr7_2:86864703-86864722 | Msa1085850:CDS | 40.0% | |
| ! | ATCGTAGTTCTGCTTCTTCT+CGG | + | chr7_2:86864808-86864827 | None:intergenic | 40.0% |
| !! | AGCGTTGACAACAAGGATTT+GGG | + | chr7_2:86864862-86864881 | None:intergenic | 40.0% |
| GTTCTTTCCCATGAGAACAA+CGG | + | chr7_2:86864940-86864959 | None:intergenic | 40.0% | |
| !! | GTTGAGAAAAGCATTGTTGC+CGG | + | chr7_2:86865003-86865022 | None:intergenic | 40.0% |
| TAACGACAAGAAGAGGGATA+AGG | + | chr7_2:86865025-86865044 | None:intergenic | 40.0% | |
| ! | ATAATGGGGCGTGTTTGAAT+TGG | - | chr7_2:86865264-86865283 | Msa1085850:CDS | 40.0% |
| !! | GTCTCTTTGTTTGGTGCTTA+TGG | + | chr7_2:86865734-86865753 | None:intergenic | 40.0% |
| TGAGGATTTGTGCTGAATCA+GGG | - | chr7_2:86865877-86865896 | Msa1085850:intron | 40.0% | |
| CATCCCAACCAAGATTAACA+AGG | - | chr7_2:86866441-86866460 | Msa1085850:intron | 40.0% | |
| GTACCCTTGTTAATCTTGGT+TGG | + | chr7_2:86866448-86866467 | None:intergenic | 40.0% | |
| CACAGTACCCTTGTTAATCT+TGG | + | chr7_2:86866452-86866471 | None:intergenic | 40.0% | |
| !! | CAAGATTAACAAGGGTACTG+TGG | - | chr7_2:86866450-86866469 | Msa1085850:intron | 40.0% |
| TGTGGAAATTATTACCCCTG+TGG | - | chr7_2:86866468-86866487 | Msa1085850:intron | 40.0% | |
| CCTTTCTTAATGAGTTCCAC+AGG | + | chr7_2:86866487-86866506 | None:intergenic | 40.0% | |
| CCTGTGGAACTCATTAAGAA+AGG | - | chr7_2:86866484-86866503 | Msa1085850:intron | 40.0% | |
| GTCCTCTCTGTTTATGACAA+TGG | - | chr7_2:86866580-86866599 | Msa1085850:intron | 40.0% | |
| CAATGAAAGTGAAGTGACCA+TGG | + | chr7_2:86866677-86866696 | None:intergenic | 40.0% | |
| CATGGTCACTTCACTTTCAT+TGG | - | chr7_2:86866675-86866694 | Msa1085850:intron | 40.0% | |
| !! | TAGGCATTGACGAACATATG+AGG | + | chr7_2:86866730-86866749 | None:intergenic | 40.0% |
| TACCGAATATTCTTTCCCTG+AGG | - | chr7_2:86866777-86866796 | Msa1085850:CDS | 40.0% | |
| TGCCTCAGGGAAAGAATATT+CGG | + | chr7_2:86866782-86866801 | None:intergenic | 40.0% | |
| CAGCTACAGCAAACTTACTT+GGG | + | chr7_2:86866920-86866939 | None:intergenic | 40.0% | |
| ACAGCTACAGCAAACTTACT+TGG | + | chr7_2:86866921-86866940 | None:intergenic | 40.0% | |
| TCTTCATCAGACTCTTCTTC+AGG | + | chr7_2:86867017-86867036 | None:intergenic | 40.0% | |
| GAAGAGTCTGATGAAGACAT+TGG | - | chr7_2:86867020-86867039 | Msa1085850:five_prime_UTR | 40.0% | |
| GAGTTCGGTAGTCAAATTAC+TGG | - | chr7_2:86867266-86867285 | Msa1085850:five_prime_UTR | 40.0% | |
| !! | GGTATTTTGGGGAGTTTGAG+GGG | - | chr7_2:86864444-86864463 | Msa1085850:three_prime_UTR | 45.0% |
| !! | GTATTTTGGGGAGTTTGAGG+GGG | - | chr7_2:86864445-86864464 | Msa1085850:three_prime_UTR | 45.0% |
| ! | TAAGCCCCTTCTTTTGCTCA+CGG | + | chr7_2:86864471-86864490 | None:intergenic | 45.0% |
| AAACCCAGTGGGCCTAAAAA+GGG | - | chr7_2:86864544-86864563 | Msa1085850:three_prime_UTR | 45.0% | |
| ! | GGGTTTTCTCTGCCCTTTTT+AGG | + | chr7_2:86864559-86864578 | None:intergenic | 45.0% |
| AGAGTGAGCGTGAAATGGTT+GGG | + | chr7_2:86864607-86864626 | None:intergenic | 45.0% | |
| ! | GGAACGAAACGAAGGGTTTT+AGG | + | chr7_2:86864645-86864664 | None:intergenic | 45.0% |
| TCGTTCCTTCCAAAAAGAGC+AGG | - | chr7_2:86864658-86864677 | Msa1085850:three_prime_UTR | 45.0% | |
| GACGTATAGTTCAGTCAAGG+CGG | + | chr7_2:86864702-86864721 | None:intergenic | 45.0% | |
| GGGTGTATTCATCGATAAGC+TGG | + | chr7_2:86864842-86864861 | None:intergenic | 45.0% | |
| !! | CAGCGTTGACAACAAGGATT+TGG | + | chr7_2:86864863-86864882 | None:intergenic | 45.0% |
| TCAGCTACAGAACATTCGTC+AGG | - | chr7_2:86864899-86864918 | Msa1085850:intron | 45.0% | |
| CAGCTACAGAACATTCGTCA+GGG | - | chr7_2:86864900-86864919 | Msa1085850:intron | 45.0% | |
| ACGAACAGATCGCTTCATCA+TGG | + | chr7_2:86864964-86864983 | None:intergenic | 45.0% | |
| AATAAGCTTATGGCCCCGTT+TGG | + | chr7_2:86865631-86865650 | None:intergenic | 45.0% | |
| GTGAGGATTTGTGCTGAATC+AGG | - | chr7_2:86865876-86865895 | Msa1085850:intron | 45.0% | |
| GTGCTGAATCAGGGTAATGT+TGG | - | chr7_2:86865886-86865905 | Msa1085850:intron | 45.0% | |
| GGAGGAACAACGACATCAAT+TGG | + | chr7_2:86866302-86866321 | None:intergenic | 45.0% | |
| ATTGATGTCGTTGTTCCTCC+AGG | - | chr7_2:86866302-86866321 | Msa1085850:intron | 45.0% | |
| ! | GGAAGAAAGAGGTCTGAGAT+GGG | + | chr7_2:86866343-86866362 | None:intergenic | 45.0% |
| TGGAAGAAAGAGGTCTGAGA+TGG | + | chr7_2:86866344-86866363 | None:intergenic | 45.0% | |
| ATCTCAGACCTCTTTCTTCC+AGG | - | chr7_2:86866343-86866362 | Msa1085850:intron | 45.0% | |
| TGCTTGCCAAGTTAGGCATT+AGG | - | chr7_2:86866536-86866555 | Msa1085850:intron | 45.0% | |
| AAAGGGCCTAATGCCTAACT+TGG | + | chr7_2:86866545-86866564 | None:intergenic | 45.0% | |
| ! | GGCATTAGGCCCTTTTCATA+CGG | - | chr7_2:86866550-86866569 | Msa1085850:intron | 45.0% |
| ! | GCATTAGGCCCTTTTCATAC+GGG | - | chr7_2:86866551-86866570 | Msa1085850:intron | 45.0% |
| ACCACAAGCCCGTATGAAAA+GGG | + | chr7_2:86866562-86866581 | None:intergenic | 45.0% | |
| !! | GTTTGCTATTGGGGTTTCCA+TGG | - | chr7_2:86866657-86866676 | Msa1085850:intron | 45.0% |
| !! | CAAGGTTAAGGAGTACCTGA+AGG | - | chr7_2:86866804-86866823 | Msa1085850:CDS | 45.0% |
| !! | GACATTGGTTTCGGTCTGTT+TGG | - | chr7_2:86867035-86867054 | Msa1085850:five_prime_UTR | 45.0% |
| !! | AACTTATAAATAATAAATAA+AGG | + | chr7_2:86865482-86865501 | None:intergenic | 5.0% |
| GGGAGTTAACTCTCAATCGG+TGG | + | chr7_2:86864395-86864414 | None:intergenic | 50.0% | |
| CAAACCCAGTGGGCCTAAAA+AGG | - | chr7_2:86864543-86864562 | Msa1085850:three_prime_UTR | 50.0% | |
| AGCGTGAAATGGTTGGGAAG+CGG | + | chr7_2:86864601-86864620 | None:intergenic | 50.0% | |
| GAGAGTGAGCGTGAAATGGT+TGG | + | chr7_2:86864608-86864627 | None:intergenic | 50.0% | |
| GAGAGAGAGTGAGCGTGAAA+TGG | + | chr7_2:86864612-86864631 | None:intergenic | 50.0% | |
| ! | TGCTTCTTCTCGGCTTTGGT+AGG | + | chr7_2:86864798-86864817 | None:intergenic | 50.0% |
| GTTCTGCTTCTTCTCGGCTT+TGG | + | chr7_2:86864802-86864821 | None:intergenic | 50.0% | |
| !! | CGTTGTCAGCGTTGACAACA+AGG | + | chr7_2:86864869-86864888 | None:intergenic | 50.0% |
| GTTGTCAACGCTGACAACGT+TGG | - | chr7_2:86864870-86864889 | Msa1085850:intron | 50.0% | |
| AACATTCGTCAGGGTCTACG+TGG | - | chr7_2:86864909-86864928 | Msa1085850:intron | 50.0% | |
| TGGTGACTCCGTTGTTCTCA+TGG | - | chr7_2:86864929-86864948 | Msa1085850:CDS | 50.0% | |
| GGTGACTCCGTTGTTCTCAT+GGG | - | chr7_2:86864930-86864949 | Msa1085850:CDS | 50.0% | |
| CGTATGCACGCTGAGAAAAC+CGG | - | chr7_2:86864981-86865000 | Msa1085850:CDS | 50.0% | |
| !! | TCACCTCTAGTGAGGTACTG+TGG | - | chr7_2:86866073-86866092 | Msa1085850:intron | 50.0% |
| CAACCACAGTACCTCACTAG+AGG | + | chr7_2:86866079-86866098 | None:intergenic | 50.0% | |
| GCATGGCAATTGCAGCAATG+TGG | - | chr7_2:86866175-86866194 | Msa1085850:intron | 50.0% | |
| TTGTTCCTCCAGGCAACACA+GGG | - | chr7_2:86866312-86866331 | Msa1085850:intron | 50.0% | |
| GGGATGTTGAGCACCTAAAG+TGG | + | chr7_2:86866427-86866446 | None:intergenic | 50.0% | |
| GCTGCATTGCTTGCCAAGTT+AGG | - | chr7_2:86866529-86866548 | Msa1085850:intron | 50.0% | |
| GACCACAAGCCCGTATGAAA+AGG | + | chr7_2:86866563-86866582 | None:intergenic | 50.0% | |
| TGGTTCAGTGTTTAGCCCTG+AGG | - | chr7_2:86866600-86866619 | Msa1085850:intron | 50.0% | |
| CAGTGAGGTCAAGAACCTCA+GGG | + | chr7_2:86866618-86866637 | None:intergenic | 50.0% | |
| TCAGTGAGGTCAAGAACCTC+AGG | + | chr7_2:86866619-86866638 | None:intergenic | 50.0% | |
| TGAGGTTCTTGACCTCACTG+AGG | - | chr7_2:86866618-86866637 | Msa1085850:intron | 50.0% | |
| CTACAAGGTCATCCTCAGTG+AGG | + | chr7_2:86866633-86866652 | None:intergenic | 50.0% | |
| !! | GGCAAGTGTTGGGTAAGAGA+TGG | + | chr7_2:86866701-86866720 | None:intergenic | 50.0% |
| GACGAACATATGAGGAGCAG+CGG | + | chr7_2:86866722-86866741 | None:intergenic | 50.0% | |
| TTCTTTCCCTGAGGCAGACA+AGG | - | chr7_2:86866786-86866805 | Msa1085850:CDS | 50.0% | |
| CCTTAACCTTGTCTGCCTCA+GGG | + | chr7_2:86866795-86866814 | None:intergenic | 50.0% | |
| TCCTTAACCTTGTCTGCCTC+AGG | + | chr7_2:86866796-86866815 | None:intergenic | 50.0% | |
| TTCCTTCTTTGCCTCCTCCT+TGG | + | chr7_2:86866991-86867010 | None:intergenic | 50.0% | |
| ! | GTGACTTGTGTTTGCCTCCT+AGG | - | chr7_2:86867227-86867246 | Msa1085850:five_prime_UTR | 50.0% |
| !! | CTGCCCTTTTTAGGCCCACT+GGG | + | chr7_2:86864550-86864569 | None:intergenic | 55.0% |
| !! | TCTGCCCTTTTTAGGCCCAC+TGG | + | chr7_2:86864551-86864570 | None:intergenic | 55.0% |
| GCGTGAAATGGTTGGGAAGC+GGG | + | chr7_2:86864600-86864619 | None:intergenic | 55.0% | |
| !!! | CGAAGGGTTTTAGGGTTCGG+TGG | + | chr7_2:86864636-86864655 | None:intergenic | 55.0% |
| CTGCGTACGGGCGTTAGAAT+TGG | + | chr7_2:86865692-86865711 | None:intergenic | 55.0% | |
| AAGCGCGTACTCACTGCGTA+CGG | + | chr7_2:86865705-86865724 | None:intergenic | 55.0% | |
| !! | AGCTCCTGCTCGTGTTGGTT+TGG | - | chr7_2:86866271-86866290 | Msa1085850:intron | 55.0% |
| GCAACCAAACCAACACGAGC+AGG | + | chr7_2:86866278-86866297 | None:intergenic | 55.0% | |
| GTTGTTCCTCCAGGCAACAC+AGG | - | chr7_2:86866311-86866330 | Msa1085850:intron | 55.0% | |
| ! | GCCCTTTTCATACGGGCTTG+TGG | - | chr7_2:86866558-86866577 | Msa1085850:intron | 55.0% |
| CCCTGAGGCAGACAAGGTTA+AGG | - | chr7_2:86866792-86866811 | Msa1085850:CDS | 55.0% | |
| TGCCAAGGAGGAGGCAAAGA+AGG | - | chr7_2:86866986-86867005 | Msa1085850:five_prime_UTR | 55.0% | |
| AGGGGGCCGTGAGCAAAAGA+AGG | - | chr7_2:86864462-86864481 | Msa1085850:three_prime_UTR | 60.0% | |
| GGGGGCCGTGAGCAAAAGAA+GGG | - | chr7_2:86864463-86864482 | Msa1085850:three_prime_UTR | 60.0% | |
| GGGGCCGTGAGCAAAAGAAG+GGG | - | chr7_2:86864464-86864483 | Msa1085850:three_prime_UTR | 60.0% | |
| AGCGCGTACTCACTGCGTAC+GGG | + | chr7_2:86865704-86865723 | None:intergenic | 60.0% | |
| GCAGTGAGTACGCGCTTGTG+TGG | - | chr7_2:86865708-86865727 | Msa1085850:intron | 60.0% | |
| GTTGGAGCTCCTGCTCGTGT+TGG | - | chr7_2:86866266-86866285 | Msa1085850:intron | 60.0% | |
| GAGGAGCAGCGGCAAGTGTT+GGG | + | chr7_2:86866711-86866730 | None:intergenic | 60.0% | |
| TGAGGAGCAGCGGCAAGTGT+TGG | + | chr7_2:86866712-86866731 | None:intergenic | 60.0% | |
| TCGAGCCCTGTGTTGCCTGG+AGG | + | chr7_2:86866320-86866339 | None:intergenic | 65.0% | |
| ACCAGACGCAGCAGCAGCTG+GGG | + | chr7_2:86866949-86866968 | None:intergenic | 65.0% | |
| CACCAGACGCAGCAGCAGCT+GGG | + | chr7_2:86866950-86866969 | None:intergenic | 65.0% | |
| CTCCTTGGCAGCTGCAGCAG+GGG | + | chr7_2:86866976-86866995 | None:intergenic | 65.0% | |
| CCTCCTTGGCAGCTGCAGCA+GGG | + | chr7_2:86866977-86866996 | None:intergenic | 65.0% | |
| TCCTCCTTGGCAGCTGCAGC+AGG | + | chr7_2:86866978-86866997 | None:intergenic | 65.0% | |
| TGCTGCAGCTGCCAAGGAGG+AGG | - | chr7_2:86866977-86866996 | Msa1085850:five_prime_UTR | 65.0% | |
| GGGTCGAGCCCTGTGTTGCC+TGG | + | chr7_2:86866323-86866342 | None:intergenic | 70.0% | |
| CCACCAGACGCAGCAGCAGC+TGG | + | chr7_2:86866951-86866970 | None:intergenic | 70.0% | |
| CCAGCTGCTGCTGCGTCTGG+TGG | - | chr7_2:86866948-86866967 | Msa1085850:CDS | 70.0% | |
| TGCCCCTGCTGCAGCTGCCA+AGG | - | chr7_2:86866971-86866990 | Msa1085850:five_prime_UTR | 70.0% | |
| CCCTGCTGCAGCTGCCAAGG+AGG | - | chr7_2:86866974-86866993 | Msa1085850:five_prime_UTR | 70.0% | |
| GCCCCAGCTGCTGCTGCGTC+TGG | - | chr7_2:86866945-86866964 | Msa1085850:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 86864389 | 86867361 | 86864389 | ID=Msa1085850;Name=Msa1085850 |
| chr7_2 | mRNA | 86864389 | 86867361 | 86864389 | ID=Msa1085850-mRNA-1;Parent=Msa1085850;Name=Msa1085850-mRNA-1;_AED=0.02;_eAED=0.02;_QI=394|1|1|1|1|1|5|294|323 |
| chr7_2 | exon | 86864389 | 86864835 | 86864389 | ID=Msa1085850-mRNA-1:exon:23590;Parent=Msa1085850-mRNA-1 |
| chr7_2 | exon | 86864925 | 86865317 | 86864925 | ID=Msa1085850-mRNA-1:exon:23589;Parent=Msa1085850-mRNA-1 |
| chr7_2 | exon | 86865386 | 86865484 | 86865386 | ID=Msa1085850-mRNA-1:exon:23588;Parent=Msa1085850-mRNA-1 |
| chr7_2 | exon | 86865784 | 86865852 | 86865784 | ID=Msa1085850-mRNA-1:exon:23587;Parent=Msa1085850-mRNA-1 |
| chr7_2 | exon | 86866710 | 86867361 | 86866710 | ID=Msa1085850-mRNA-1:exon:23586;Parent=Msa1085850-mRNA-1 |
| chr7_2 | five_prime_UTR | 86866968 | 86867361 | 86866968 | ID=Msa1085850-mRNA-1:five_prime_utr;Parent=Msa1085850-mRNA-1 |
| chr7_2 | CDS | 86866710 | 86866967 | 86866710 | ID=Msa1085850-mRNA-1:cds;Parent=Msa1085850-mRNA-1 |
| chr7_2 | CDS | 86865784 | 86865852 | 86865784 | ID=Msa1085850-mRNA-1:cds;Parent=Msa1085850-mRNA-1 |
| chr7_2 | CDS | 86865386 | 86865484 | 86865386 | ID=Msa1085850-mRNA-1:cds;Parent=Msa1085850-mRNA-1 |
| chr7_2 | CDS | 86864925 | 86865317 | 86864925 | ID=Msa1085850-mRNA-1:cds;Parent=Msa1085850-mRNA-1 |
| chr7_2 | CDS | 86864683 | 86864835 | 86864683 | ID=Msa1085850-mRNA-1:cds;Parent=Msa1085850-mRNA-1 |
| chr7_2 | three_prime_UTR | 86864389 | 86864682 | 86864389 | ID=Msa1085850-mRNA-1:three_prime_utr;Parent=Msa1085850-mRNA-1 |
| Gene Sequence |
| Protein sequence |
