AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0972980

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0972980 MtrunA17_Chr6g0451841 97.970 542 10 1 1 542 1 541 0.0 1088
Msa0972980 MtrunA17_Chr4g0014871 38.745 542 292 10 12 537 37 554 3.44e-130 391
Msa0972980 MtrunA17_Chr4g0014841 37.803 537 301 7 12 537 36 550 3.47e-127 383
Msa0972980 MtrunA17_Chr4g0014781 38.333 540 302 7 12 540 36 555 1.76e-126 381
Msa0972980 MtrunA17_Chr4g0014791 37.616 537 302 9 12 537 36 550 1.23e-125 379
Msa0972980 MtrunA17_Chr3g0077151 38.078 541 294 9 12 540 35 546 6.49e-125 377
Msa0972980 MtrunA17_Chr4g0014801 37.523 549 308 8 4 537 24 552 4.25e-122 370
Msa0972980 MtrunA17_Chr8g0353031 35.599 559 305 14 12 542 25 556 1.15e-114 351
Msa0972980 MtrunA17_Chr4g0008651 34.901 553 311 10 16 542 45 574 1.28e-113 349
Msa0972980 MtrunA17_Chr4g0005901 36.166 553 304 9 13 537 40 571 5.32e-111 342
Msa0972980 MtrunA17_Chr7g0240381 34.177 553 309 9 12 538 36 559 2.14e-110 340
Msa0972980 MtrunA17_Chr3g0112671 35.556 540 293 10 24 538 52 561 8.24e-110 339
Msa0972980 MtrunA17_Chr7g0241741 34.901 553 311 11 13 537 30 561 4.52e-109 337
Msa0972980 MtrunA17_Chr4g0014861 39.294 425 238 7 119 537 19 429 1.38e-108 331
Msa0972980 MtrunA17_Chr3g0112611 34.120 551 312 12 16 538 43 570 9.25e-107 332
Msa0972980 MtrunA17_Chr8g0375311 33.690 561 318 10 12 540 47 585 2.96e-106 330
Msa0972980 MtrunA17_Chr3g0114501 35.145 552 319 9 12 540 29 564 3.97e-106 330
Msa0972980 MtrunA17_Chr8g0375291 34.664 551 300 12 12 527 47 572 3.66e-102 319
Msa0972980 MtrunA17_Chr3g0104011 32.374 556 326 9 13 538 30 565 5.44e-99 311
Msa0972980 MtrunA17_Chr8g0375351 33.694 555 314 11 12 534 47 579 7.31e-99 311
Msa0972980 MtrunA17_Chr8g0375341 33.922 566 310 11 12 540 47 585 8.14e-99 311
Msa0972980 MtrunA17_Chr7g0261881 32.007 553 329 11 12 536 34 567 4.41e-95 301
Msa0972980 MtrunA17_Chr7g0261771 32.379 559 330 11 6 536 33 571 6.44e-95 301
Msa0972980 MtrunA17_Chr7g0261811 32.007 553 329 10 12 536 34 567 1.77e-94 300
Msa0972980 MtrunA17_Chr1g0187241 31.851 562 330 14 12 542 33 572 1.84e-93 297
Msa0972980 MtrunA17_Chr8g0375321 32.264 561 326 10 12 540 44 582 1.63e-91 291
Msa0972980 MtrunA17_Chr7g0261791 31.560 564 328 11 12 541 36 575 2.81e-91 291
Msa0972980 MtrunA17_Chr1g0166711 33.452 562 320 15 12 542 32 570 3.24e-91 291
Msa0972980 MtrunA17_Chr3g0142101 32.353 544 314 13 23 540 53 568 1.06e-90 290
Msa0972980 MtrunA17_Chr8g0375331 32.458 533 306 10 12 512 31 541 2.00e-88 283
Msa0972980 MtrunA17_Chr1g0166741 31.485 559 322 14 12 539 34 562 5.16e-88 282
Msa0972980 MtrunA17_Chr3g0082631 36.142 451 240 11 119 541 33 463 7.29e-87 276
Msa0972980 MtrunA17_Chr7g0261851 31.449 566 338 12 6 542 30 574 1.65e-86 279
Msa0972980 MtrunA17_Chr8g0375361 32.079 558 325 10 12 537 46 581 3.87e-85 275
Msa0972980 MtrunA17_Chr7g0217461 31.532 555 325 8 15 534 34 568 8.80e-84 271
Msa0972980 MtrunA17_Chr5g0399061 33.088 544 323 11 23 539 45 574 6.36e-83 269
Msa0972980 MtrunA17_Chr1g0166791 29.912 565 337 13 12 542 31 570 6.62e-83 269
Msa0972980 MtrunA17_Chr1g0166771 31.629 528 300 14 24 520 10 507 2.09e-82 266
Msa0972980 MtrunA17_Chr7g0255621 30.403 546 326 10 24 536 39 563 3.43e-82 268
Msa0972980 MtrunA17_Chr5g0399071 32.554 556 310 14 23 539 43 572 5.72e-82 267
Msa0972980 MtrunA17_Chr4g0056431 30.796 578 316 8 12 539 32 575 9.15e-82 266
Msa0972980 MtrunA17_Chr5g0415791 30.179 560 323 8 24 541 48 581 1.59e-81 266
Msa0972980 MtrunA17_Chr7g0261661 32.373 451 257 9 108 536 29 453 2.07e-81 263
Msa0972980 MtrunA17_Chr8g0362711 31.900 558 325 11 4 527 25 561 2.51e-81 265
Msa0972980 MtrunA17_Chr4g0054891 31.418 557 319 11 16 536 121 650 2.72e-81 267
Msa0972980 MtrunA17_Chr5g0422881 29.872 549 344 8 24 542 39 576 2.95e-80 262
Msa0972980 MtrunA17_Chr7g0214461 28.571 553 351 12 6 534 79 611 1.30e-77 256
Msa0972980 MtrunA17_Chr3g0142091 31.181 542 320 10 23 537 44 559 1.25e-75 249
Msa0972980 MtrunA17_Chr5g0415961 30.713 547 325 12 16 527 35 562 3.49e-75 249
Msa0972980 MtrunA17_Chr7g0255601 29.358 545 331 10 24 535 46 569 3.72e-75 249
Msa0972980 MtrunA17_Chr1g0213711 29.038 551 331 12 16 534 32 554 4.06e-75 249
Msa0972980 MtrunA17_Chr5g0400371 29.735 565 338 12 6 534 114 655 5.97e-75 250
Msa0972980 MtrunA17_Chr1g0166731 34.163 442 249 12 120 542 49 467 1.51e-73 241
Msa0972980 MtrunA17_Chr4g0059991 29.928 558 330 11 24 541 41 577 2.20e-73 244
Msa0972980 MtrunA17_Chr4g0059981 30.700 557 329 15 24 542 50 587 2.26e-72 242
Msa0972980 MtrunA17_Chr4g0059971 28.388 546 339 11 24 534 53 581 2.29e-72 241
Msa0972980 MtrunA17_Chr7g0255611 29.725 545 329 11 24 535 48 571 1.82e-70 236
Msa0972980 MtrunA17_Chr4g0063591 30.601 549 335 10 16 539 33 560 3.96e-70 235
Msa0972980 MtrunA17_Chr8g0362781 28.272 573 320 11 23 540 48 584 4.33e-70 235
Msa0972980 MtrunA17_Chr2g0276751 28.545 550 347 10 11 540 44 567 1.18e-69 234
Msa0972980 MtrunA17_Chr8g0390331 29.872 549 327 14 24 539 34 557 4.31e-68 230
Msa0972980 MtrunA17_Chr2g0284701 26.620 571 359 10 12 540 39 591 2.76e-67 228
Msa0972980 MtrunA17_Chr4g0011471 29.358 545 322 9 27 534 38 556 2.97e-67 228
Msa0972980 MtrunA17_Chr7g0218851 27.128 564 356 14 1 534 43 581 5.23e-67 228
Msa0972980 MtrunA17_Chr7g0261751 30.242 496 269 10 6 441 33 511 7.86e-65 220
Msa0972980 MtrunA17_Chr5g0439381 28.445 566 310 13 24 541 47 565 1.10e-64 221
Msa0972980 MtrunA17_Chr1g0157601 28.029 553 339 13 16 534 26 553 1.00e-63 218
Msa0972980 MtrunA17_Chr1g0193391 29.032 558 353 12 5 542 17 551 1.52e-63 218
Msa0972980 MtrunA17_Chr2g0331521 27.778 576 353 15 5 542 20 570 4.69e-63 216
Msa0972980 MtrunA17_Chr3g0112631 40.417 240 142 1 299 538 35 273 5.79e-63 208
Msa0972980 MtrunA17_Chr7g0271221 29.295 553 358 10 5 542 17 551 1.15e-62 215
Msa0972980 MtrunA17_Chr4g0003761 28.114 562 335 15 16 538 41 572 4.79e-62 214
Msa0972980 MtrunA17_Chr4g0011041 28.700 554 346 13 12 534 43 578 9.95e-62 213
Msa0972980 MtrunA17_Chr1g0157611 29.068 547 341 11 16 534 27 554 1.09e-61 213
Msa0972980 MtrunA17_Chr3g0133341 28.042 567 348 12 8 541 15 554 1.43e-61 212
Msa0972980 MtrunA17_Chr8g0379971 27.477 535 326 12 22 506 37 559 4.01e-61 212
Msa0972980 MtrunA17_Chr1g0147631 27.273 550 348 11 16 534 36 564 1.26e-60 210
Msa0972980 MtrunA17_Chr1g0177591 28.839 534 322 15 30 538 67 567 1.74e-60 209
Msa0972980 MtrunA17_Chr2g0331471 27.465 568 358 15 5 538 85 632 5.94e-60 210
Msa0972980 MtrunA17_Chr4g0060001 28.080 552 326 14 24 534 48 569 1.39e-59 207
Msa0972980 MtrunA17_Chr2g0331481 27.098 572 363 15 1 538 18 569 6.44e-59 206
Msa0972980 MtrunA17_Chr1g0157621 29.220 551 306 14 30 534 5 517 3.86e-58 202
Msa0972980 MtrunA17_Chr1g0177631 31.891 439 243 14 123 538 33 438 4.78e-58 199
Msa0972980 MtrunA17_Chr8g0362801 27.533 454 281 8 108 537 32 461 5.74e-58 200
Msa0972980 MtrunA17_Chr8g0379991 27.072 543 315 11 30 506 5 532 1.75e-57 201
Msa0972980 MtrunA17_Chr1g0177611 30.524 439 249 14 123 538 33 438 1.03e-54 191
Msa0972980 MtrunA17_Chr5g0415841 28.636 440 267 10 120 535 42 458 2.76e-54 190
Msa0972980 MtrunA17_Chr7g0214731 26.277 548 359 11 24 539 80 614 3.07e-54 194
Msa0972980 MtrunA17_Chr2g0331511 26.079 579 359 15 1 538 15 565 5.35e-54 193
Msa0972980 MtrunA17_Chr7g0240271 26.557 546 349 11 24 536 43 569 8.83e-54 191
Msa0972980 MtrunA17_Chr4g0069581 26.047 549 341 12 23 539 4 519 8.68e-53 188
Msa0972980 MtrunA17_Chr2g0331461 26.631 567 366 14 1 535 18 566 5.74e-52 187
Msa0972980 MtrunA17_Chr3g0142121 34.601 263 161 3 278 540 19 270 1.63e-50 175
Msa0972980 MtrunA17_Chr2g0326211 25.400 563 360 10 1 536 16 545 5.84e-49 177
Msa0972980 MtrunA17_Chr2g0325951 25.187 536 344 11 27 536 41 545 1.75e-48 176
Msa0972980 MtrunA17_Chr2g0325961 25.872 545 343 12 20 536 35 546 6.31e-48 174
Msa0972980 MtrunA17_Chr7g0234181 30.913 427 248 11 116 534 26 413 1.75e-47 170
Msa0972980 MtrunA17_Chr4g0060071 34.328 268 169 4 277 541 39 302 3.17e-47 167
Msa0972980 MtrunA17_Chr7g0240281 25.360 556 341 10 24 534 43 569 4.64e-47 173
Msa0972980 MtrunA17_Chr7g0240131 27.578 446 275 12 115 534 33 456 4.32e-44 162
Msa0972980 MtrunA17_Chr7g0235521 27.578 446 275 12 115 534 33 456 1.93e-43 161
Msa0972980 MtrunA17_Chr7g0240211 27.314 443 280 11 115 534 33 456 4.51e-43 160
Msa0972980 MtrunA17_Chr7g0240181 27.314 443 280 11 115 534 33 456 4.56e-43 160
Msa0972980 MtrunA17_Chr7g0261721 36.634 202 126 2 336 536 1 201 1.28e-42 152
Msa0972980 MtrunA17_Chr7g0234151 29.358 436 251 9 112 534 27 418 1.53e-40 151
Msa0972980 MtrunA17_Chr7g0234381 28.842 423 262 8 116 534 31 418 3.70e-40 150
Msa0972980 MtrunA17_Chr7g0240151 26.269 453 254 13 115 534 33 438 6.39e-38 145
Msa0972980 MtrunA17_Chr7g0261731 29.940 334 178 9 6 307 33 342 3.94e-37 140
Msa0972980 MtrunA17_Chr3g0142111 34.468 235 130 4 23 248 64 283 8.52e-33 128
Msa0972980 MtrunA17_Chr2g0326221 25.943 212 126 5 328 539 44 224 3.05e-20 89.7
Msa0972980 MtrunA17_Chr3g0112651 36.752 117 66 1 110 226 46 154 1.07e-19 87.8
Msa0972980 MtrunA17_Chr4g0060061 34.646 127 68 3 114 240 16 127 1.34e-13 68.2
Msa0972980 MtrunA17_Chr1g0147591 32.292 96 60 1 123 218 9 99 2.86e-12 65.9
Msa0972980 MtrunA17_Chr3g0082621 44.118 68 38 0 24 91 5 72 6.83e-12 61.6
Msa0972980 MtrunA17_Chr7g0261831 26.712 146 92 3 254 384 14 159 7.91e-12 65.1
Msa0972980 MtrunA17_Chr4g0014851 40.506 79 47 0 13 91 38 116 1.65e-11 62.8
Msa0972980 MtrunA17_Chr3g0112661 44.118 68 38 0 24 91 50 117 2.77e-11 61.6
Msa0972980 MtrunA17_Chr1g0147581 30.579 121 78 2 390 510 1 115 9.20e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0972980 AT5G14940.1 61.111 558 187 11 1 541 1 545 0.0 647
Msa0972980 AT3G01350.1 59.855 553 202 8 5 541 5 553 0.0 611
Msa0972980 AT1G22540.1 41.031 524 281 6 24 537 47 552 3.51e-131 394
Msa0972980 AT1G72140.1 38.910 532 276 11 24 536 51 552 2.93e-125 378
Msa0972980 AT1G72120.1 39.252 535 294 8 12 534 34 549 1.65e-123 374
Msa0972980 AT1G72125.1 39.400 533 276 10 24 534 46 553 7.70e-123 372
Msa0972980 AT1G72130.1 36.531 542 311 8 2 540 26 537 2.70e-121 367
Msa0972980 AT3G54450.1 36.057 563 308 13 5 541 10 546 9.37e-119 362
Msa0972980 AT1G22550.1 37.665 531 290 9 24 534 47 556 2.45e-114 350
Msa0972980 AT3G53960.1 34.403 561 306 11 12 538 42 574 1.73e-106 332
Msa0972980 AT2G37900.1 33.810 559 312 10 12 542 43 571 3.42e-106 330
Msa0972980 AT1G22570.2 37.378 511 282 12 24 515 10 501 1.50e-104 324
Msa0972980 AT1G22570.1 36.902 523 292 12 12 515 35 538 3.06e-104 324
Msa0972980 AT5G01180.2 32.918 562 322 12 13 542 31 569 1.37e-102 320
Msa0972980 AT5G01180.3 32.918 562 322 12 13 542 31 569 1.37e-102 320
Msa0972980 AT5G01180.1 32.918 562 322 12 13 542 31 569 1.37e-102 320
Msa0972980 AT3G54140.1 33.573 557 318 10 13 538 30 565 3.32e-102 319
Msa0972980 AT3G54140.2 33.573 557 318 10 13 538 30 565 3.32e-102 319
Msa0972980 AT2G40460.1 33.868 561 323 11 6 542 24 560 8.61e-102 318
Msa0972980 AT1G72130.2 36.557 424 243 6 119 540 20 419 5.62e-99 306
Msa0972980 AT1G72130.3 36.557 424 243 6 119 540 20 419 5.62e-99 306
Msa0972980 AT2G37900.2 33.973 521 286 10 50 542 2 492 8.24e-99 308
Msa0972980 AT2G02040.1 32.973 555 330 10 12 540 46 584 9.28e-98 308
Msa0972980 AT1G62200.1 32.737 559 315 8 12 537 57 587 3.89e-94 299
Msa0972980 AT2G02020.1 33.766 539 303 12 12 537 47 544 1.81e-93 296
Msa0972980 AT1G62200.2 31.834 578 324 9 12 537 57 616 1.29e-90 291
Msa0972980 AT1G62200.3 31.834 578 324 9 12 537 71 630 2.20e-90 290
Msa0972980 AT5G46040.1 31.041 567 340 10 4 539 20 566 3.31e-85 275
Msa0972980 AT2G02020.2 32.653 539 288 14 12 537 47 523 3.65e-82 266
Msa0972980 AT1G27040.3 31.801 544 329 9 14 534 2 526 1.50e-81 265
Msa0972980 AT1G27040.2 31.949 554 333 10 4 534 22 554 1.93e-81 265
Msa0972980 AT5G46050.1 30.125 561 340 12 12 542 32 570 2.79e-81 265
Msa0972980 AT1G27040.1 31.949 554 333 10 4 534 26 558 2.87e-81 265
Msa0972980 AT1G69850.1 31.218 583 336 15 4 542 24 585 8.66e-79 259
Msa0972980 AT1G69870.1 29.529 552 328 9 23 537 67 594 2.56e-77 256
Msa0972980 AT1G32450.1 31.103 553 332 11 15 534 45 581 4.43e-77 255
Msa0972980 AT4G21680.1 31.228 570 324 14 13 540 34 577 6.70e-77 254
Msa0972980 AT2G26690.1 29.837 553 339 10 13 539 30 559 4.52e-76 251
Msa0972980 AT2G26690.2 30.018 543 331 10 23 539 7 526 6.96e-76 250
Msa0972980 AT1G68570.2 30.165 547 331 10 24 537 10 538 1.02e-75 250
Msa0972980 AT1G68570.1 29.799 547 333 9 24 537 40 568 2.03e-75 250
Msa0972980 AT2G26690.3 30.037 536 326 10 30 539 2 514 3.06e-74 245
Msa0972980 AT5G62730.2 29.144 549 338 11 16 539 6 528 7.51e-74 244
Msa0972980 AT5G62730.1 29.055 561 345 12 4 539 55 587 1.12e-73 245
Msa0972980 AT5G19640.1 28.571 567 324 13 13 541 65 588 1.40e-72 243
Msa0972980 AT1G12110.1 28.374 578 324 12 13 539 33 571 8.86e-72 240
Msa0972980 AT5G46050.2 31.293 441 263 10 120 542 40 458 6.99e-69 229
Msa0972980 AT1G18880.1 27.768 551 341 11 24 537 36 566 3.77e-68 231
Msa0972980 AT1G59740.1 28.877 561 336 12 18 542 49 582 1.18e-67 229
Msa0972980 AT3G21670.1 29.380 548 322 12 24 539 46 560 1.93e-66 226
Msa0972980 AT3G16180.1 29.514 576 336 18 7 538 19 568 4.15e-66 225
Msa0972980 AT1G33440.1 27.143 560 338 12 11 534 42 567 2.29e-62 215
Msa0972980 AT1G52190.1 28.299 576 342 16 4 535 18 566 4.25e-62 215
Msa0972980 AT3G25260.1 27.619 525 329 11 19 534 33 515 9.41e-61 209
Msa0972980 AT1G27080.1 27.387 555 335 11 23 541 30 552 4.05e-60 209
Msa0972980 AT5G62680.1 25.532 564 347 10 24 541 60 596 6.45e-59 206
Msa0972980 AT5G13400.1 26.703 558 347 10 24 541 81 616 2.32e-57 202
Msa0972980 AT1G27080.2 27.407 540 324 11 38 541 3 510 2.51e-57 200
Msa0972980 AT1G69860.1 27.473 546 343 14 23 541 34 553 9.72e-57 199
Msa0972980 AT3G47960.1 25.405 555 357 11 24 541 78 612 2.60e-56 199
Msa0972980 AT3G45720.1 25.603 539 333 12 34 542 46 546 1.44e-54 193
Msa0972980 AT5G28470.2 28.073 545 343 14 24 539 34 558 8.21e-54 191
Msa0972980 AT5G11570.1 27.106 546 315 12 1 537 7 478 3.57e-53 188
Msa0972980 AT3G45660.1 26.916 535 325 14 30 536 44 540 1.37e-52 188
Msa0972980 AT3G45660.3 26.916 535 325 14 30 536 44 540 1.37e-52 188
Msa0972980 AT3G45660.2 26.916 535 325 14 30 536 65 561 2.48e-52 187
Msa0972980 AT3G45650.1 26.692 532 322 14 34 536 49 541 3.67e-52 187
Msa0972980 AT3G45680.1 24.156 563 350 12 16 541 30 552 4.30e-51 184
Msa0972980 AT5G28470.1 27.890 545 342 15 24 539 34 556 5.52e-51 184
Msa0972980 AT3G25280.1 25.898 529 345 9 16 534 30 521 2.44e-50 181
Msa0972980 AT3G45700.1 24.632 544 346 14 16 535 26 529 1.83e-47 174
Msa0972980 AT3G45650.2 25.806 558 320 16 34 536 49 567 5.91e-47 173
Msa0972980 AT3G45710.1 22.785 553 352 13 16 535 31 541 7.36e-45 167
Msa0972980 AT3G45690.1 21.550 529 311 13 34 535 45 496 9.64e-32 129
Msa0972980 AT2G38100.2 26.015 542 314 20 35 541 2 491 5.19e-31 126
Msa0972980 AT2G38100.1 26.015 542 314 20 35 541 18 507 8.77e-31 126
Msa0972980 AT2G38100.3 26.015 542 314 20 35 541 24 513 9.52e-31 126

Find 100 sgRNAs with CRISPR-Local

Find 332 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTTCCAATGGTGGTATTT+TGG 0.169051 6_4:+5315105 Msa0972980:CDS
CACCTATTGCTGATGCTTAT+TGG 0.205664 6_4:+5311857 Msa0972980:CDS
GACACATTTGGTTGGGTAAT+AGG 0.231752 6_4:+5315177 Msa0972980:CDS
CAAAGGGGTAGCCTCAAATT+TGG 0.254691 6_4:+5311735 Msa0972980:CDS
TGATTAAGCTATTGCCTATA+TGG 0.259511 6_4:+5315930 Msa0972980:CDS
ACCTATTGCTGATGCTTATT+GGG 0.269588 6_4:+5311858 Msa0972980:CDS
CATTTGGTATCTTCTTATAA+TGG 0.282553 6_4:+5310998 Msa0972980:exon
CTTCATTGTCATGCCTTGTT+TGG 0.287571 6_4:-5316005 None:intergenic
TTACCACAGTACATTCTTCT+TGG 0.292712 6_4:+5316322 Msa0972980:CDS
ACACATTTGGTTGGGTAATA+GGG 0.306033 6_4:+5315178 Msa0972980:CDS
TCTCTCTTAAGTTTGGATAT+TGG 0.309812 6_4:+5310955 Msa0972980:five_prime_UTR
TAACGGCATCAATAGTATTA+TGG 0.318413 6_4:-5316089 None:intergenic
AACAACCAGAAAATGCTTAT+TGG 0.321275 6_4:-5316301 None:intergenic
CTGATAACACGACAGGAAAA+AGG 0.335435 6_4:+5316142 Msa0972980:CDS
TCTCTCTATTTAATCTCATT+AGG 0.346870 6_4:+5314970 Msa0972980:CDS
ATCCTTCACTTCTCATTTGT+CGG 0.356684 6_4:-5316261 None:intergenic
GTTTCCACATGATCATGTTT+TGG 0.359186 6_4:-5310911 None:intergenic
CCCATTGTTCTCATATTCTT+CGG 0.361859 6_4:-5316400 None:intergenic
GAGAAAAGATGAGGACATTA+TGG 0.364757 6_4:-5311893 None:intergenic
AAGCATTAAGGTCATAAATA+AGG 0.365962 6_4:+5315865 Msa0972980:CDS
TGCCACCAACAATGGCATTA+TGG 0.367205 6_4:-5311836 None:intergenic
TGTTTGTGCTGGAAGCCTAA+TGG 0.372172 6_4:+5315128 Msa0972980:CDS
CTCTTTGAAACAGTCATTGC+AGG 0.374811 6_4:+5311694 Msa0972980:intron
GCTATATTAATATGATATAA+TGG 0.375823 6_4:-5316728 None:intergenic
CACTTCCATAATGCCATTGT+TGG 0.382096 6_4:+5311831 Msa0972980:CDS
CACGTTTGGATAATTACTAT+TGG 0.386424 6_4:+5316548 Msa0972980:CDS
CGAAAACTGTGAAAGCATTA+AGG 0.391903 6_4:+5315853 Msa0972980:CDS
CAGCAAAGATGGTTAATAGT+TGG 0.392002 6_4:+5311800 Msa0972980:CDS
GTTTGTGCTGGAAGCCTAAT+GGG 0.410630 6_4:+5315129 Msa0972980:CDS
TTAATCATAACCTTTACATT+TGG 0.412053 6_4:-5315914 None:intergenic
TGGTATCTTCTTATAATGGC+TGG 0.414363 6_4:+5311002 Msa0972980:exon
TTTAAGGTACTATACAAGAT+TGG 0.426509 6_4:-5310883 None:intergenic
AATCCATCTCTACAAGCCTT+TGG 0.428240 6_4:+5315006 Msa0972980:CDS
TCTTACATCCAAGACACATT+TGG 0.430307 6_4:+5315165 Msa0972980:CDS
TAGATAAGTTACCAAATTTG+AGG 0.430421 6_4:-5311746 None:intergenic
AGCAAAGATGGTTAATAGTT+GGG 0.441043 6_4:+5311801 Msa0972980:CDS
CATCCAAGACACATTTGGTT+GGG 0.442138 6_4:+5315170 Msa0972980:CDS
ATGAGAAGCATTGTCCATAT+AGG 0.448966 6_4:-5315944 None:intergenic
TGATATGGTCGAGGCACGTT+TGG 0.450686 6_4:+5316534 Msa0972980:CDS
AATTCATGCATTCTCCTCAT+AGG 0.453128 6_4:+5311050 Msa0972980:CDS
ATTACTATTGGCTTCTAGCT+TGG 0.455302 6_4:+5316560 Msa0972980:CDS
GAAGTATACACAAGTTCAAA+AGG 0.460982 6_4:+5316490 Msa0972980:CDS
CAATTCATCTGCAGCAAAGA+TGG 0.461506 6_4:+5311789 Msa0972980:CDS
GCCCAATAAGCATCAGCAAT+AGG 0.462037 6_4:-5311859 None:intergenic
ACATGAATGTTACACCCATT+AGG 0.462461 6_4:-5315143 None:intergenic
TAGAGAGGTTTGCATTCAAA+GGG 0.464940 6_4:+5311719 Msa0972980:CDS
CCGAAGAATATGAGAACAAT+GGG 0.466258 6_4:+5316400 Msa0972980:CDS
GCCTTTGGAGCTGATCAACT+TGG 0.472222 6_4:+5315021 Msa0972980:CDS
GCATGAATTGCTGAGCCTCT+TGG 0.476082 6_4:-5311036 None:intergenic
AAGATGGTTAATAGTTGGGT+TGG 0.477748 6_4:+5311805 Msa0972980:CDS
TGGACAATGTTATCGCACTT+TGG 0.479592 6_4:-5316069 None:intergenic
GCTCCAAAGGCTTGTAGAGA+TGG 0.488186 6_4:-5315009 None:intergenic
TTCCATAATGCCATTGTTGG+TGG 0.499004 6_4:+5311834 Msa0972980:CDS
ATCGCACTTTGGAGTGTGGC+CGG 0.502046 6_4:-5316058 None:intergenic
GAAATGAAACGCCTTGCTAT+CGG 0.504880 6_4:+5316238 Msa0972980:CDS
TTACCCAACCAAATGTGTCT+TGG 0.508468 6_4:-5315173 None:intergenic
ATAGAGAGGTTTGCATTCAA+AGG 0.511614 6_4:+5311718 Msa0972980:CDS
CTCTTAAACATGTTCGTGAA+AGG 0.511777 6_4:-5315312 None:intergenic
TGCTATACCTGCGATTTCGA+TGG 0.512758 6_4:+5315203 Msa0972980:CDS
ACATCCAAGACACATTTGGT+TGG 0.514558 6_4:+5315169 Msa0972980:CDS
AAACACCAAAATACCACCAT+TGG 0.524353 6_4:-5315110 None:intergenic
ACCAAGTTGATCAGCTCCAA+AGG 0.526037 6_4:-5315022 None:intergenic
CAACAGCATTAGTAAGATCA+TGG 0.527295 6_4:+5314905 Msa0972980:CDS
AACTTATCTAACTGATGTTG+TGG 0.535055 6_4:+5311759 Msa0972980:CDS
GTGTCTGCTACCAAATGTAA+AGG 0.535911 6_4:+5315904 Msa0972980:CDS
GTGATGCAAAGGATGGGAAT+CGG 0.543695 6_4:+5316172 Msa0972980:CDS
CGCTCAGCTGATAACACGAC+AGG 0.545338 6_4:+5316135 Msa0972980:CDS
TATAAACGTGATGCAAAGGA+TGG 0.549790 6_4:+5316165 Msa0972980:CDS
TCATTTGTCGGCCGATAGCA+AGG 0.551787 6_4:-5316249 None:intergenic
GGCCGACAAATGAGAAGTGA+AGG 0.560082 6_4:+5316259 Msa0972980:CDS
TATTTAATCTCATTAGGCCA+AGG 0.562331 6_4:+5314976 Msa0972980:CDS
CGTGTTATCAGCTGAGCGAA+CGG 0.563262 6_4:-5316130 None:intergenic
GTTCAAAAGGAACTCCAAGT+TGG 0.566715 6_4:+5316503 Msa0972980:CDS
TGTAACAGAGTTAGTACTAT+CGG 0.567272 6_4:+5310833 Msa0972980:five_prime_UTR
TTCAAATTTCAAGATACCAC+CGG 0.568640 6_4:+5316039 Msa0972980:CDS
AAGGTATAAACGTGATGCAA+AGG 0.571082 6_4:+5316161 Msa0972980:CDS
ATGACAATGAAGAGAAACAT+AGG 0.572423 6_4:+5316016 Msa0972980:CDS
TGTTATCGCACTTTGGAGTG+TGG 0.573845 6_4:-5316062 None:intergenic
ACACATAGAGTTTACCTATG+AGG 0.578571 6_4:-5311064 None:intergenic
AAAAGATGAGGACATTATGG+TGG 0.581494 6_4:-5311890 None:intergenic
GAAAGAACCATCGAAATCGC+AGG 0.584602 6_4:-5315210 None:intergenic
TCCGAAGAATATGAGAACAA+TGG 0.585411 6_4:+5316399 Msa0972980:CDS
GTGTCATCTGTGTTACTACA+AGG 0.595088 6_4:-5315060 None:intergenic
TATCTTCTTATAATGGCTGG+TGG 0.599636 6_4:+5311005 Msa0972980:exon
GCAAAGGATGGGAATCGGAA+TGG 0.605289 6_4:+5316177 Msa0972980:CDS
CAGTCATTGCAGGTATAGAG+AGG 0.605527 6_4:+5311704 Msa0972980:intron
AAAACCAAAACATGATCATG+TGG 0.607034 6_4:+5310907 Msa0972980:five_prime_UTR
AAGCACTCTTCTTCCAATGG+TGG 0.612613 6_4:+5315097 Msa0972980:CDS
ATATCATCAGAAAACCAACT+TGG 0.615024 6_4:-5316517 None:intergenic
ATAAACGTGATGCAAAGGAT+GGG 0.622044 6_4:+5316166 Msa0972980:CDS
GAGATGGATTATATCCACCT+TGG 0.625994 6_4:-5314993 None:intergenic
GCAATAGGTGCCACCAACAA+TGG 0.628514 6_4:-5311844 None:intergenic
TTAATCTCATTAGGCCAAGG+TGG 0.638847 6_4:+5314979 Msa0972980:CDS
GCACTTTGGAGTGTGGCCGG+TGG 0.651354 6_4:-5316055 None:intergenic
TTGGTAGAGTAATTTCACAA+TGG 0.651611 6_4:-5315362 None:intergenic
CATAACATAGAGAAAAGATG+AGG 0.677023 6_4:-5311902 None:intergenic
AATCATAGCGATGATTATCG+CGG 0.703876 6_4:+5316207 Msa0972980:CDS
AGAGAGGTTTGCATTCAAAG+GGG 0.708268 6_4:+5311720 Msa0972980:CDS
CTGGTGGACAGAAAACCAAG+AGG 0.752478 6_4:+5311021 Msa0972980:CDS
ATACCAAGAAGAATGTACTG+TGG 0.754580 6_4:-5316325 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATACTATTAACAAAATTAA+TGG - chr6_4:5312455-5312474 None:intergenic 10.0%
!! TATAAAAACAAAAAAAGAAA+TGG - chr6_4:5312512-5312531 None:intergenic 10.0%
!! ATAACATAAAAAATAATAAG+TGG - chr6_4:5313105-5313124 None:intergenic 10.0%
!! GAAATAAATAAAAACAAAAT+TGG - chr6_4:5314254-5314273 None:intergenic 10.0%
!! GATGTAAAAAATAATAAAAA+TGG - chr6_4:5314281-5314300 None:intergenic 10.0%
!!! ATTATTTTTTACATCATTTT+TGG + chr6_4:5314286-5314305 Msa0972980:intron 10.0%
!!! AATTTTTATGAATAAAAAAG+AGG - chr6_4:5314322-5314341 None:intergenic 10.0%
!! AGAAAATTACATATAATCAA+TGG - chr6_4:5311282-5311301 None:intergenic 15.0%
!! TAGAATATCATAAATCAAAA+GGG - chr6_4:5311627-5311646 None:intergenic 15.0%
!! ATAGAATATCATAAATCAAA+AGG - chr6_4:5311628-5311647 None:intergenic 15.0%
!! TGATATTTCATACAAATATT+TGG + chr6_4:5312133-5312152 Msa0972980:intron 15.0%
!!! TTCCTTTTTAATCAAAATTT+AGG - chr6_4:5312813-5312832 None:intergenic 15.0%
!!! ACTTATGTTTTGTATTAATT+TGG - chr6_4:5312964-5312983 None:intergenic 15.0%
!!! TGAAATTTTTATAATCATAG+AGG - chr6_4:5313053-5313072 None:intergenic 15.0%
!! ACATAATTTAGTGTAATTAT+AGG + chr6_4:5313482-5313501 Msa0972980:intron 15.0%
!! CTTTAAACATGTTATAATTA+TGG + chr6_4:5314485-5314504 Msa0972980:intron 15.0%
!! GCTATATTAATATGATATAA+TGG - chr6_4:5316731-5316750 None:intergenic 15.0%
!!! TCATGTTTTGGTTTTTTTTA+AGG - chr6_4:5310902-5310921 None:intergenic 20.0%
!!! TTAATAGGATTTATTTTCCA+CGG + chr6_4:5311327-5311346 Msa0972980:intron 20.0%
!! TATTGTTTGAATTATGACTA+TGG - chr6_4:5311586-5311605 None:intergenic 20.0%
!! TGTAAATATGTAAATGCAAA+AGG - chr6_4:5311962-5311981 None:intergenic 20.0%
!! TAGTATTTGTATAAAGTAGT+AGG - chr6_4:5312412-5312431 None:intergenic 20.0%
!! AATACTATAGTATTAGCATT+AGG + chr6_4:5312425-5312444 Msa0972980:intron 20.0%
!! AAAAAGAAATGGAATAATCT+TGG - chr6_4:5312501-5312520 None:intergenic 20.0%
!! TACTATATAGTATTAGCATT+AGG + chr6_4:5312624-5312643 Msa0972980:intron 20.0%
!!! AATTGTTCATTGATTGATAA+GGG - chr6_4:5312746-5312765 None:intergenic 20.0%
!!! AAATTGTTCATTGATTGATA+AGG - chr6_4:5312747-5312766 None:intergenic 20.0%
!!! CTTTTTAATCAAAATTTAGG+TGG - chr6_4:5312810-5312829 None:intergenic 20.0%
!!! CACCTAAATTTTGATTAAAA+AGG + chr6_4:5312808-5312827 Msa0972980:intron 20.0%
!! TATCTATTAACTATACTGTT+TGG - chr6_4:5313019-5313038 None:intergenic 20.0%
!! AACAGTATAGTTAATAGATA+AGG + chr6_4:5313019-5313038 Msa0972980:intron 20.0%
!!! TATTATATCCTTTTAGCATA+TGG - chr6_4:5313139-5313158 None:intergenic 20.0%
!! ACTCAAAATTCTCTTTAATA+TGG - chr6_4:5313274-5313293 None:intergenic 20.0%
!!! TATTAAAGAGAATTTTGAGT+TGG + chr6_4:5313274-5313293 Msa0972980:intron 20.0%
!! CATCTTATATGAATATAGTT+TGG - chr6_4:5313612-5313631 None:intergenic 20.0%
!!! AAAACCAAGGTTTTAAAAAA+CGG + chr6_4:5313673-5313692 Msa0972980:intron 20.0%
!!! AACTAAAATACCATTTTGAT+TGG - chr6_4:5313967-5313986 None:intergenic 20.0%
!! ACATATAGTTAAAAAACCAA+GGG - chr6_4:5314174-5314193 None:intergenic 20.0%
!! TACATATAGTTAAAAAACCA+AGG - chr6_4:5314175-5314194 None:intergenic 20.0%
!!! TTGGTTTTTTAACTATATGT+AGG + chr6_4:5314174-5314193 Msa0972980:intron 20.0%
!! CTATATGTAGGAATTAAATT+TGG + chr6_4:5314186-5314205 Msa0972980:intron 20.0%
!!! TTTTTGAGAATGTATAGAAA+CGG - chr6_4:5314729-5314748 None:intergenic 20.0%
!! TTAATCATAACCTTTACATT+TGG - chr6_4:5315917-5315936 None:intergenic 20.0%
!!! TAATTTTATCACAAAGTTTG+TGG + chr6_4:5316696-5316715 Msa0972980:three_prime_UTR 20.0%
!! TTTAAGGTACTATACAAGAT+TGG - chr6_4:5310886-5310905 None:intergenic 25.0%
!!! TTTTGATTCTCTCTTAAGTT+TGG + chr6_4:5310948-5310967 Msa0972980:five_prime_UTR 25.0%
!!! TTCATTTTTCTAGAAGCATT+TGG + chr6_4:5310982-5311001 Msa0972980:five_prime_UTR 25.0%
! CATTTGGTATCTTCTTATAA+TGG + chr6_4:5310998-5311017 Msa0972980:exon 25.0%
!!! TTTCAAGTTTCAACCTTATT+AGG + chr6_4:5311136-5311155 Msa0972980:intron 25.0%
!! TTCAAGTTTCAACCTTATTA+GGG + chr6_4:5311137-5311156 Msa0972980:intron 25.0%
! GTTGAATTAAAGCATATGTT+TGG + chr6_4:5311192-5311211 Msa0972980:intron 25.0%
! GTTAGAGAAAATATCACAAA+TGG - chr6_4:5311228-5311247 None:intergenic 25.0%
! ACATATAATCAATGGAATTG+AGG - chr6_4:5311274-5311293 None:intergenic 25.0%
! CTATAGTTAAATTCAACTAC+AGG - chr6_4:5311454-5311473 None:intergenic 25.0%
! CTGTAGTTGAATTTAACTAT+AGG + chr6_4:5311452-5311471 Msa0972980:intron 25.0%
!!! TCTTCTAGAGTTTTAAATCA+TGG - chr6_4:5311560-5311579 None:intergenic 25.0%
! TAGATAAGTTACCAAATTTG+AGG - chr6_4:5311749-5311768 None:intergenic 25.0%
!! GAAGTATATAATTTTGTGGA+AGG - chr6_4:5311936-5311955 None:intergenic 25.0%
!!! GAAGGAAGTATATAATTTTG+TGG - chr6_4:5311940-5311959 None:intergenic 25.0%
! AATATGTAAATGCAAAAGGA+AGG - chr6_4:5311958-5311977 None:intergenic 25.0%
! ACAATCAAGTAATCAACTAT+AGG - chr6_4:5312198-5312217 None:intergenic 25.0%
! CATATATGCTTAAATATGAG+TGG - chr6_4:5312685-5312704 None:intergenic 25.0%
!! ATTTTCTTCTGTAGATTACA+TGG - chr6_4:5312850-5312869 None:intergenic 25.0%
! CTTAGACATCGATAATAAAT+TGG - chr6_4:5312884-5312903 None:intergenic 25.0%
! TGGTTTCATGTCTATATAAT+TGG - chr6_4:5313202-5313221 None:intergenic 25.0%
! ATATATTCACCCAAACAAAT+AGG + chr6_4:5313243-5313262 Msa0972980:intron 25.0%
!!! ATGGTTTTACCTATTTGTTT+GGG - chr6_4:5313255-5313274 None:intergenic 25.0%
!!! TATGGTTTTACCTATTTGTT+TGG - chr6_4:5313256-5313275 None:intergenic 25.0%
!!! AAACCAAGGTTTTAAAAAAC+GGG + chr6_4:5313674-5313693 Msa0972980:intron 25.0%
!!! TTTTGACTGAATTTTCAAGT+TGG - chr6_4:5313869-5313888 None:intergenic 25.0%
!!! GTATTTTAGTTTGTGAGATT+TGG + chr6_4:5313976-5313995 Msa0972980:intron 25.0%
!!! TTAACCAAGGTTCTAAAAAA+CGG - chr6_4:5314682-5314701 None:intergenic 25.0%
! GTTTCTATACATTCTCAAAA+AGG + chr6_4:5314728-5314747 Msa0972980:intron 25.0%
! CAAGAAAAAATGTCATTAAC+TGG - chr6_4:5314850-5314869 None:intergenic 25.0%
! TCTCTCTATTTAATCTCATT+AGG + chr6_4:5314970-5314989 Msa0972980:CDS 25.0%
! TCAGAATTAGGTTAAACAAT+AGG - chr6_4:5315602-5315621 None:intergenic 25.0%
! AAGCATTAAGGTCATAAATA+AGG + chr6_4:5315865-5315884 Msa0972980:CDS 25.0%
! ATAAAAACTCTGTCGTATAA+CGG - chr6_4:5316109-5316128 None:intergenic 25.0%
!! TATATCAGATATTTTCACAG+TGG + chr6_4:5316345-5316364 Msa0972980:CDS 25.0%
!!! GGTATGCAAGAATTTTTTTA+CGG + chr6_4:5316370-5316389 Msa0972980:CDS 25.0%
TGTAACAGAGTTAGTACTAT+CGG + chr6_4:5310833-5310852 Msa0972980:five_prime_UTR 30.0%
AAAACCAAAACATGATCATG+TGG + chr6_4:5310907-5310926 Msa0972980:five_prime_UTR 30.0%
TCTCTCTTAAGTTTGGATAT+TGG + chr6_4:5310955-5310974 Msa0972980:five_prime_UTR 30.0%
AGCAAAATTCATCCCTAATA+AGG - chr6_4:5311152-5311171 None:intergenic 30.0%
! AATTTTCTGCTGAAAAACCT+AGG + chr6_4:5311294-5311313 Msa0972980:intron 30.0%
!! CTATTAAAGACTAGTTTCCT+AGG - chr6_4:5311314-5311333 None:intergenic 30.0%
!! CTAGGAAACTAGTCTTTAAT+AGG + chr6_4:5311312-5311331 Msa0972980:intron 30.0%
TAATGTTGCAAAGGAGATTA+CGG - chr6_4:5311353-5311372 None:intergenic 30.0%
TAATCTCCTTTGCAACATTA+TGG + chr6_4:5311353-5311372 Msa0972980:intron 30.0%
AATCTCCTTTGCAACATTAT+GGG + chr6_4:5311354-5311373 Msa0972980:intron 30.0%
AATTCAAATCCATTCAACTG+TGG - chr6_4:5311404-5311423 None:intergenic 30.0%
AGATTGATGCAAGTTCAATA+GGG - chr6_4:5311488-5311507 None:intergenic 30.0%
AACTTATCTAACTGATGTTG+TGG + chr6_4:5311759-5311778 Msa0972980:CDS 30.0%
AGCAAAGATGGTTAATAGTT+GGG + chr6_4:5311801-5311820 Msa0972980:CDS 30.0%
CATAACATAGAGAAAAGATG+AGG - chr6_4:5311905-5311924 None:intergenic 30.0%
! CTCATCTTTTCTCTATGTTA+TGG + chr6_4:5311903-5311922 Msa0972980:CDS 30.0%
GATTTGAACTCAGTCATTTA+AGG + chr6_4:5312082-5312101 Msa0972980:intron 30.0%
TGTATGAAATATCAGTTCAG+TGG - chr6_4:5312127-5312146 None:intergenic 30.0%
TATGCAATGAATAATACACG+TGG + chr6_4:5312370-5312389 Msa0972980:intron 30.0%
TTTGTATAAAGTAGTAGGTC+AGG - chr6_4:5312407-5312426 None:intergenic 30.0%
CAAAATTTAGGTGGATATTC+TGG - chr6_4:5312801-5312820 None:intergenic 30.0%
ATTAAGCACCATATGCTAAA+AGG + chr6_4:5313128-5313147 Msa0972980:intron 30.0%
AGATCATGACATCATAATCA+TGG - chr6_4:5313222-5313241 None:intergenic 30.0%
CCTCAAATTATTATCTGCAT+CGG - chr6_4:5313457-5313476 None:intergenic 30.0%
! TGTAATTATAGGTGTCATGT+CGG + chr6_4:5313493-5313512 Msa0972980:intron 30.0%
TTATCATAAGCTAATCCATG+AGG + chr6_4:5313632-5313651 Msa0972980:intron 30.0%
TATCATAAGCTAATCCATGA+GGG + chr6_4:5313633-5313652 Msa0972980:intron 30.0%
TGTAGATAAGGTTAAAACCA+AGG + chr6_4:5313660-5313679 Msa0972980:intron 30.0%
TTTCTTTCTCAGCGTTAAAA+GGG - chr6_4:5313760-5313779 None:intergenic 30.0%
ATTTCTTTCTCAGCGTTAAA+AGG - chr6_4:5313761-5313780 None:intergenic 30.0%
!!! GGTTTTAGAAAATTCAACAG+TGG + chr6_4:5314010-5314029 Msa0972980:intron 30.0%
ACCTTGGTTAAAACTACTTA+TGG + chr6_4:5314691-5314710 Msa0972980:intron 30.0%
!!! TCCATAAGTAGTTTTAACCA+AGG - chr6_4:5314695-5314714 None:intergenic 30.0%
CAGTAACTTTCTGTTTGATT+TGG - chr6_4:5314799-5314818 None:intergenic 30.0%
! TTCTTGTGTTTTCTTCCTAT+AGG + chr6_4:5314864-5314883 Msa0972980:intron 30.0%
! TCTTGTGTTTTCTTCCTATA+GGG + chr6_4:5314865-5314884 Msa0972980:intron 30.0%
TATTTAATCTCATTAGGCCA+AGG + chr6_4:5314976-5314995 Msa0972980:CDS 30.0%
! TCTATCTTGATTTTCTCTAG+TGG + chr6_4:5315231-5315250 Msa0972980:CDS 30.0%
TTGGTAGAGTAATTTCACAA+TGG - chr6_4:5315365-5315384 None:intergenic 30.0%
! ACATTTTCAGACTTGTCATT+TGG - chr6_4:5315384-5315403 None:intergenic 30.0%
GAATTAGGTTAAACAATAGG+CGG - chr6_4:5315599-5315618 None:intergenic 30.0%
!!! ATCTTGTCGTTTTCAGAATT+AGG - chr6_4:5315614-5315633 None:intergenic 30.0%
ACACATATGAGATGAGAAAT+CGG + chr6_4:5315635-5315654 Msa0972980:intron 30.0%
!!! TTAACAAGACCTGTGTTTTT+TGG + chr6_4:5315704-5315723 Msa0972980:intron 30.0%
ATTCTCTTACCAAAAAACAC+AGG - chr6_4:5315716-5315735 None:intergenic 30.0%
GTAAGAGAATGTGTGAAAAA+TGG + chr6_4:5315726-5315745 Msa0972980:intron 30.0%
TGATTAAGCTATTGCCTATA+TGG + chr6_4:5315930-5315949 Msa0972980:CDS 30.0%
ATGACAATGAAGAGAAACAT+AGG + chr6_4:5316016-5316035 Msa0972980:CDS 30.0%
TTCAAATTTCAAGATACCAC+CGG + chr6_4:5316039-5316058 Msa0972980:CDS 30.0%
TAACGGCATCAATAGTATTA+TGG - chr6_4:5316092-5316111 None:intergenic 30.0%
! TAGTACCAATAAGCATTTTC+TGG + chr6_4:5316296-5316315 Msa0972980:CDS 30.0%
AACAACCAGAAAATGCTTAT+TGG - chr6_4:5316304-5316323 None:intergenic 30.0%
! GCATTGTATACAAGTGTTTT+CGG + chr6_4:5316427-5316446 Msa0972980:CDS 30.0%
GAAGTATACACAAGTTCAAA+AGG + chr6_4:5316490-5316509 Msa0972980:CDS 30.0%
ATATCATCAGAAAACCAACT+TGG - chr6_4:5316520-5316539 None:intergenic 30.0%
!!! AAGTTGGTTTTCTGATGATA+TGG + chr6_4:5316519-5316538 Msa0972980:CDS 30.0%
CACGTTTGGATAATTACTAT+TGG + chr6_4:5316548-5316567 Msa0972980:CDS 30.0%
! GTTTCCACATGATCATGTTT+TGG - chr6_4:5310914-5310933 None:intergenic 35.0%
TGGTATCTTCTTATAATGGC+TGG + chr6_4:5311002-5311021 Msa0972980:exon 35.0%
TATCTTCTTATAATGGCTGG+TGG + chr6_4:5311005-5311024 Msa0972980:exon 35.0%
AATTCATGCATTCTCCTCAT+AGG + chr6_4:5311050-5311069 Msa0972980:CDS 35.0%
ACACATAGAGTTTACCTATG+AGG - chr6_4:5311067-5311086 None:intergenic 35.0%
TTGCTCATGATTGATCACAA+TGG + chr6_4:5311167-5311186 Msa0972980:intron 35.0%
AATGGAATTGAGGCTTAAGA+AGG - chr6_4:5311264-5311283 None:intergenic 35.0%
CAAAACCCATAATGTTGCAA+AGG - chr6_4:5311362-5311381 None:intergenic 35.0%
TTGTAGTTGAATTCAACTGC+AGG - chr6_4:5311428-5311447 None:intergenic 35.0%
ATGCAAGTTCAATAGGGATT+AGG - chr6_4:5311482-5311501 None:intergenic 35.0%
GAGATTGATGCAAGTTCAAT+AGG - chr6_4:5311489-5311508 None:intergenic 35.0%
CTAGATATTGAGTAGAATCG+CGG - chr6_4:5311518-5311537 None:intergenic 35.0%
ATAGAGAGGTTTGCATTCAA+AGG + chr6_4:5311718-5311737 Msa0972980:CDS 35.0%
TAGAGAGGTTTGCATTCAAA+GGG + chr6_4:5311719-5311738 Msa0972980:CDS 35.0%
CAGCAAAGATGGTTAATAGT+TGG + chr6_4:5311800-5311819 Msa0972980:CDS 35.0%
AAGATGGTTAATAGTTGGGT+TGG + chr6_4:5311805-5311824 Msa0972980:CDS 35.0%
ACCTATTGCTGATGCTTATT+GGG + chr6_4:5311858-5311877 Msa0972980:CDS 35.0%
AAAAGATGAGGACATTATGG+TGG - chr6_4:5311893-5311912 None:intergenic 35.0%
GAGAAAAGATGAGGACATTA+TGG - chr6_4:5311896-5311915 None:intergenic 35.0%
GAGTTCAAATCAGTCAAAGA+CGG - chr6_4:5312073-5312092 None:intergenic 35.0%
TTGATTGTGAAGTAAGACAG+TGG + chr6_4:5312210-5312229 Msa0972980:intron 35.0%
TCTGCAATGACTAATATACG+TGG + chr6_4:5312565-5312584 Msa0972980:intron 35.0%
CAGACTCCAACAAAACTTAA+CGG - chr6_4:5312654-5312673 None:intergenic 35.0%
!! CTACAGTTTTTGAAGAGTTC+AGG + chr6_4:5312718-5312737 Msa0972980:intron 35.0%
GTGAAATGTAGAATCTGACT+TGG - chr6_4:5312779-5312798 None:intergenic 35.0%
! TTCATTCTAGTGAGGGATTT+TGG - chr6_4:5313166-5313185 None:intergenic 35.0%
ACTTCACTTCATTCTAGTGA+GGG - chr6_4:5313173-5313192 None:intergenic 35.0%
AACTTCACTTCATTCTAGTG+AGG - chr6_4:5313174-5313193 None:intergenic 35.0%
!! CTTTTTGATGTAGCTTGCAT+AGG - chr6_4:5313332-5313351 None:intergenic 35.0%
CCGATGCAGATAATAATTTG+AGG + chr6_4:5313454-5313473 Msa0972980:intron 35.0%
TTCTTTCTCAGCGTTAAAAG+GGG - chr6_4:5313759-5313778 None:intergenic 35.0%
GCGTGAAAATCCAATCAAAA+TGG + chr6_4:5313954-5313973 Msa0972980:intron 35.0%
!! TGAGATTTGGTGAACATTTG+AGG + chr6_4:5313989-5314008 Msa0972980:intron 35.0%
! AAGGGTGCAGATATGAAAAA+GGG - chr6_4:5314156-5314175 None:intergenic 35.0%
! AAAAACAAAATTGGCTCAGC+TGG - chr6_4:5314245-5314264 None:intergenic 35.0%
CAACAGCATTAGTAAGATCA+TGG + chr6_4:5314905-5314924 Msa0972980:CDS 35.0%
!! AAAAAGCACTCTTCTTCCAA+TGG + chr6_4:5315094-5315113 Msa0972980:CDS 35.0%
! TTCTTCCAATGGTGGTATTT+TGG + chr6_4:5315105-5315124 Msa0972980:CDS 35.0%
AAACACCAAAATACCACCAT+TGG - chr6_4:5315113-5315132 None:intergenic 35.0%
ACATGAATGTTACACCCATT+AGG - chr6_4:5315146-5315165 None:intergenic 35.0%
TCTTACATCCAAGACACATT+TGG + chr6_4:5315165-5315184 Msa0972980:CDS 35.0%
ACACATTTGGTTGGGTAATA+GGG + chr6_4:5315178-5315197 Msa0972980:CDS 35.0%
CTCTTAAACATGTTCGTGAA+AGG - chr6_4:5315315-5315334 None:intergenic 35.0%
AAAAATGTGCGAGAGAATAG+AGG + chr6_4:5315479-5315498 Msa0972980:intron 35.0%
GTCATTGTAAGTCTCATAAC+GGG - chr6_4:5315761-5315780 None:intergenic 35.0%
GGTCATTGTAAGTCTCATAA+CGG - chr6_4:5315762-5315781 None:intergenic 35.0%
TTCTGTAAGCACTTCACTAT+AGG - chr6_4:5315783-5315802 None:intergenic 35.0%
!! CGAAAACTGTGAAAGCATTA+AGG + chr6_4:5315853-5315872 Msa0972980:CDS 35.0%
!! ATGAGAAGCATTGTCCATAT+AGG - chr6_4:5315947-5315966 None:intergenic 35.0%
TGAAAAAAGTTGCAGGTTGT+TGG - chr6_4:5315985-5316004 None:intergenic 35.0%
! TGTTTGGTGAAAAAAGTTGC+AGG - chr6_4:5315992-5316011 None:intergenic 35.0%
!!! GCAACTTTTTTCACCAAACA+AGG + chr6_4:5315992-5316011 Msa0972980:CDS 35.0%
AAGGTATAAACGTGATGCAA+AGG + chr6_4:5316161-5316180 Msa0972980:CDS 35.0%
TATAAACGTGATGCAAAGGA+TGG + chr6_4:5316165-5316184 Msa0972980:CDS 35.0%
ATAAACGTGATGCAAAGGAT+GGG + chr6_4:5316166-5316185 Msa0972980:CDS 35.0%
AATCATAGCGATGATTATCG+CGG + chr6_4:5316207-5316226 Msa0972980:CDS 35.0%
ATCCTTCACTTCTCATTTGT+CGG - chr6_4:5316264-5316283 None:intergenic 35.0%
TTACCACAGTACATTCTTCT+TGG + chr6_4:5316322-5316341 Msa0972980:CDS 35.0%
ATACCAAGAAGAATGTACTG+TGG - chr6_4:5316328-5316347 None:intergenic 35.0%
! TCAGATATTTTCACAGTGGT+TGG + chr6_4:5316349-5316368 Msa0972980:CDS 35.0%
TCCGAAGAATATGAGAACAA+TGG + chr6_4:5316399-5316418 Msa0972980:CDS 35.0%
CCCATTGTTCTCATATTCTT+CGG - chr6_4:5316403-5316422 None:intergenic 35.0%
CCGAAGAATATGAGAACAAT+GGG + chr6_4:5316400-5316419 Msa0972980:CDS 35.0%
! TATACAAGTGTTTTCGGAGT+TGG + chr6_4:5316433-5316452 Msa0972980:CDS 35.0%
!! ATTACTATTGGCTTCTAGCT+TGG + chr6_4:5316560-5316579 Msa0972980:CDS 35.0%
ATCCTCATACCACAGTTGAA+TGG + chr6_4:5311392-5311411 Msa0972980:intron 40.0%
ATCCATTCAACTGTGGTATG+AGG - chr6_4:5311397-5311416 None:intergenic 40.0%
!! CTCTTTGAAACAGTCATTGC+AGG + chr6_4:5311694-5311713 Msa0972980:intron 40.0%
AGAGAGGTTTGCATTCAAAG+GGG + chr6_4:5311720-5311739 Msa0972980:CDS 40.0%
CAATTCATCTGCAGCAAAGA+TGG + chr6_4:5311789-5311808 Msa0972980:CDS 40.0%
CACTTCCATAATGCCATTGT+TGG + chr6_4:5311831-5311850 Msa0972980:CDS 40.0%
TTCCATAATGCCATTGTTGG+TGG + chr6_4:5311834-5311853 Msa0972980:CDS 40.0%
CACCTATTGCTGATGCTTAT+TGG + chr6_4:5311857-5311876 Msa0972980:CDS 40.0%
CAATGAATAATACACGTGGC+TGG + chr6_4:5312374-5312393 Msa0972980:intron 40.0%
CAATGACTAATATACGTGGC+TGG + chr6_4:5312569-5312588 Msa0972980:intron 40.0%
!! GGAGATCCGTTAAGTTTTGT+TGG + chr6_4:5312645-5312664 Msa0972980:intron 40.0%
ATGAGGATACAACACTGACA+CGG - chr6_4:5312910-5312929 None:intergenic 40.0%
ATGAAGCACAGACTTAGATG+AGG - chr6_4:5312927-5312946 None:intergenic 40.0%
! TTGATGTAGCTTGCATAGGA+AGG - chr6_4:5313328-5313347 None:intergenic 40.0%
!! ATGAAGCACTGACATAGACA+CGG + chr6_4:5313410-5313429 Msa0972980:intron 40.0%
CTTATCTACATAAGCCCTCA+TGG - chr6_4:5313650-5313669 None:intergenic 40.0%
CATGAGGGCTTATGTAGATA+AGG + chr6_4:5313648-5313667 Msa0972980:intron 40.0%
!!! CGTCCCGTTTTTTAAAACCT+TGG - chr6_4:5313680-5313699 None:intergenic 40.0%
!!! ATTTGTAACGGCCGTTTTTG+CGG - chr6_4:5313706-5313725 None:intergenic 40.0%
CAAAAACGGCCGTTACAAAT+CGG + chr6_4:5313706-5313725 Msa0972980:intron 40.0%
AAAAGGGGCAAAAACGGTAA+CGG - chr6_4:5313744-5313763 None:intergenic 40.0%
AGCGTTAAAAGGGGCAAAAA+CGG - chr6_4:5313750-5313769 None:intergenic 40.0%
!! TTTCAAGTTGGAGTCCGTAA+CGG - chr6_4:5313857-5313876 None:intergenic 40.0%
GTTGTTCTTCACGTGAAGAA+AGG + chr6_4:5314046-5314065 Msa0972980:intron 40.0%
ACGTGAAGAAAGGAAGAAGA+AGG + chr6_4:5314056-5314075 Msa0972980:intron 40.0%
TATAGGACAAAACTGCAGGT+GGG - chr6_4:5314116-5314135 None:intergenic 40.0%
ATATAGGACAAAACTGCAGG+TGG - chr6_4:5314117-5314136 None:intergenic 40.0%
AGCATATAGGACAAAACTGC+AGG - chr6_4:5314120-5314139 None:intergenic 40.0%
GTGCATAAGCAACAGCATAT+AGG - chr6_4:5314133-5314152 None:intergenic 40.0%
AGGGTGCAGATATGAAAAAG+GGG - chr6_4:5314155-5314174 None:intergenic 40.0%
! CAAGGGTGCAGATATGAAAA+AGG - chr6_4:5314157-5314176 None:intergenic 40.0%
!! CTTTTTCATATCTGCACCCT+TGG + chr6_4:5314155-5314174 Msa0972980:intron 40.0%
GATACAAATAACGGTCTTCG+CGG - chr6_4:5314599-5314618 None:intergenic 40.0%
!! AAGGTTCTAAAAAACGGTCG+CGG - chr6_4:5314676-5314695 None:intergenic 40.0%
TTAATCTCATTAGGCCAAGG+TGG + chr6_4:5314979-5314998 Msa0972980:CDS 40.0%
!! GAGATGGATTATATCCACCT+TGG - chr6_4:5314996-5315015 None:intergenic 40.0%
AATCCATCTCTACAAGCCTT+TGG + chr6_4:5315006-5315025 Msa0972980:CDS 40.0%
! GTGTCATCTGTGTTACTACA+AGG - chr6_4:5315063-5315082 None:intergenic 40.0%
!!! TGGTATTTTGGTGTTTGTGC+TGG + chr6_4:5315117-5315136 Msa0972980:CDS 40.0%
ACATCCAAGACACATTTGGT+TGG + chr6_4:5315169-5315188 Msa0972980:CDS 40.0%
CATCCAAGACACATTTGGTT+GGG + chr6_4:5315170-5315189 Msa0972980:CDS 40.0%
TTACCCAACCAAATGTGTCT+TGG - chr6_4:5315176-5315195 None:intergenic 40.0%
GACACATTTGGTTGGGTAAT+AGG + chr6_4:5315177-5315196 Msa0972980:CDS 40.0%
CCAACATACGAAAATCTCAG+AGG - chr6_4:5315520-5315539 None:intergenic 40.0%
!!! CCTCTGAGATTTTCGTATGT+TGG + chr6_4:5315517-5315536 Msa0972980:intron 40.0%
GATGAGAAATCGGTATGCAT+AGG + chr6_4:5315645-5315664 Msa0972980:intron 40.0%
CATAGGATAAGTCACCAACT+CGG + chr6_4:5315662-5315681 Msa0972980:intron 40.0%
GTGTCTGCTACCAAATGTAA+AGG + chr6_4:5315904-5315923 Msa0972980:CDS 40.0%
! CTTCATTGTCATGCCTTGTT+TGG - chr6_4:5316008-5316027 None:intergenic 40.0%
TGGACAATGTTATCGCACTT+TGG - chr6_4:5316072-5316091 None:intergenic 40.0%
CTGATAACACGACAGGAAAA+AGG + chr6_4:5316142-5316161 Msa0972980:CDS 40.0%
! GAAATGAAACGCCTTGCTAT+CGG + chr6_4:5316238-5316257 Msa0972980:CDS 40.0%
GTTCAAAAGGAACTCCAAGT+TGG + chr6_4:5316503-5316522 Msa0972980:CDS 40.0%
! GTTTTCTGATGATATGGTCG+AGG + chr6_4:5316525-5316544 Msa0972980:CDS 40.0%
CAGTCATTGCAGGTATAGAG+AGG + chr6_4:5311704-5311723 Msa0972980:intron 45.0%
CAAAGGGGTAGCCTCAAATT+TGG + chr6_4:5311735-5311754 Msa0972980:CDS 45.0%
TGCCACCAACAATGGCATTA+TGG - chr6_4:5311839-5311858 None:intergenic 45.0%
GCCCAATAAGCATCAGCAAT+AGG - chr6_4:5311862-5311881 None:intergenic 45.0%
! TATAGGTGTCATGTCGGTGT+CGG + chr6_4:5313499-5313518 Msa0972980:intron 45.0%
!! CTGCCGATACCGATTTGTAA+CGG - chr6_4:5313718-5313737 None:intergenic 45.0%
!! TTACAAATCGGTATCGGCAG+CGG + chr6_4:5313718-5313737 Msa0972980:intron 45.0%
ATATCGCCGTTACAGCGTTA+CGG + chr6_4:5313789-5313808 Msa0972980:intron 45.0%
ATAGGACAAAACTGCAGGTG+GGG - chr6_4:5314115-5314134 None:intergenic 45.0%
TGGACCACTTGATGCATCAA+GGG - chr6_4:5314214-5314233 None:intergenic 45.0%
TGGCTCAGCTGGAATAAATC+TGG - chr6_4:5314234-5314253 None:intergenic 45.0%
GGACGCTGCGATACAAATAA+CGG - chr6_4:5314608-5314627 None:intergenic 45.0%
CGTTAAGGTTGTCGCGATTT+CGG - chr6_4:5314638-5314657 None:intergenic 45.0%
!!! GCGACCGTTTTTTAGAACCT+TGG + chr6_4:5314675-5314694 Msa0972980:intron 45.0%
TCAATGCTGCAAGTCCCTAT+AGG - chr6_4:5314882-5314901 None:intergenic 45.0%
!! ACCAAGTTGATCAGCTCCAA+AGG - chr6_4:5315025-5315044 None:intergenic 45.0%
AAGCACTCTTCTTCCAATGG+TGG + chr6_4:5315097-5315116 Msa0972980:CDS 45.0%
TGTTTGTGCTGGAAGCCTAA+TGG + chr6_4:5315128-5315147 Msa0972980:CDS 45.0%
GTTTGTGCTGGAAGCCTAAT+GGG + chr6_4:5315129-5315148 Msa0972980:CDS 45.0%
TGCTATACCTGCGATTTCGA+TGG + chr6_4:5315203-5315222 Msa0972980:CDS 45.0%
GAAAGAACCATCGAAATCGC+AGG - chr6_4:5315213-5315232 None:intergenic 45.0%
CGAGAGAATAGAGGAATCGA+GGG + chr6_4:5315488-5315507 Msa0972980:intron 45.0%
GTTGGATGACGATTACCTCT+AGG + chr6_4:5315535-5315554 Msa0972980:intron 45.0%
! TCACAGTTTTCGCGACAAAG+TGG - chr6_4:5315845-5315864 None:intergenic 45.0%
!! TGTTATCGCACTTTGGAGTG+TGG - chr6_4:5316065-5316084 None:intergenic 45.0%
GTGATGCAAAGGATGGGAAT+CGG + chr6_4:5316172-5316191 Msa0972980:CDS 45.0%
! CTGGTGGACAGAAAACCAAG+AGG + chr6_4:5311021-5311040 Msa0972980:CDS 50.0%
GCATGAATTGCTGAGCCTCT+TGG - chr6_4:5311039-5311058 None:intergenic 50.0%
! GCAATAGGTGCCACCAACAA+TGG - chr6_4:5311847-5311866 None:intergenic 50.0%
ACTGACATAGACACGGACAC+CGG + chr6_4:5313417-5313436 Msa0972980:intron 50.0%
! GATTAGGTGTGTCTCGGTGT+CGG - chr6_4:5313539-5313558 None:intergenic 50.0%
! TCCTCGGATTAGGTGTGTCT+CGG - chr6_4:5313545-5313564 None:intergenic 50.0%
!! TGTGAAGCACTGACACTCCT+CGG - chr6_4:5313561-5313580 None:intergenic 50.0%
ACGGGACGTTACCGCAAAAA+CGG + chr6_4:5313692-5313711 Msa0972980:intron 50.0%
CGGCCGTTACAAATCGGTAT+CGG + chr6_4:5313712-5313731 Msa0972980:intron 50.0%
GGACCACTTGATGCATCAAG+GGG - chr6_4:5314213-5314232 None:intergenic 50.0%
CTGGACCACTTGATGCATCA+AGG - chr6_4:5314215-5314234 None:intergenic 50.0%
TGTCGCGATTTCGGCTGTAA+CGG - chr6_4:5314629-5314648 None:intergenic 50.0%
GCTCCAAAGGCTTGTAGAGA+TGG - chr6_4:5315012-5315031 None:intergenic 50.0%
!! GCCTTTGGAGCTGATCAACT+TGG + chr6_4:5315021-5315040 Msa0972980:CDS 50.0%
GCGAGAGAATAGAGGAATCG+AGG + chr6_4:5315487-5315506 Msa0972980:intron 50.0%
GAATAGGCTGTGTAGCCTAG+AGG - chr6_4:5315553-5315572 None:intergenic 50.0%
GAGCGAGAGAGAAGAGGAAT+AGG - chr6_4:5315569-5315588 None:intergenic 50.0%
AACAGTGAGCGAGAGAGAAG+AGG - chr6_4:5315575-5315594 None:intergenic 50.0%
TGACGTGACAGTAACCGAGT+TGG - chr6_4:5315679-5315698 None:intergenic 50.0%
CGTGTTATCAGCTGAGCGAA+CGG - chr6_4:5316133-5316152 None:intergenic 50.0%
GCAAAGGATGGGAATCGGAA+TGG + chr6_4:5316177-5316196 Msa0972980:CDS 50.0%
TCATTTGTCGGCCGATAGCA+AGG - chr6_4:5316252-5316271 None:intergenic 50.0%
GGCCGACAAATGAGAAGTGA+AGG + chr6_4:5316259-5316278 Msa0972980:CDS 50.0%
TGATATGGTCGAGGCACGTT+TGG + chr6_4:5316534-5316553 Msa0972980:CDS 50.0%
TGCAAAGGAGATTACGGCCG+TGG - chr6_4:5311347-5311366 None:intergenic 55.0%
! ATCGGTGTCCATGTCGTGTC+CGG - chr6_4:5313439-5313458 None:intergenic 55.0%
ACCGAGACACACCTAATCCG+AGG + chr6_4:5313541-5313560 Msa0972980:intron 55.0%
! GCACTGACACTCCTCGGATT+AGG - chr6_4:5313555-5313574 None:intergenic 55.0%
GGCGTTCCGTAACGCTGTAA+CGG - chr6_4:5313798-5313817 None:intergenic 55.0%
ACGGCGTTTCACGGTCGTAA+CGG - chr6_4:5313819-5313838 None:intergenic 55.0%
ACGACCGTGAAACGCCGTTA+CGG + chr6_4:5313821-5313840 Msa0972980:intron 55.0%
CGGTCAACAAGGAAGGAAGG+AGG - chr6_4:5314088-5314107 None:intergenic 55.0%
CCTTCCTTCCTTGTTGACCG+CGG + chr6_4:5314088-5314107 Msa0972980:intron 55.0%
CTTCCTTCCTTGTTGACCGC+GGG + chr6_4:5314089-5314108 Msa0972980:intron 55.0%
GGACCCCTTGATGCATCAAG+TGG + chr6_4:5314207-5314226 Msa0972980:intron 55.0%
!! ATCGCACTTTGGAGTGTGGC+CGG - chr6_4:5316061-5316080 None:intergenic 55.0%
CGCTCAGCTGATAACACGAC+AGG + chr6_4:5316135-5316154 Msa0972980:CDS 55.0%
GAGTCCGTAACGGCGTTTCG+CGG - chr6_4:5313847-5313866 None:intergenic 60.0%
CCGCGGTCAACAAGGAAGGA+AGG - chr6_4:5314091-5314110 None:intergenic 60.0%
CACGGACACCGGACACGACA+TGG + chr6_4:5313428-5313447 Msa0972980:intron 65.0%
!! TCTCGGTGTCGGACACGCGT+CGG - chr6_4:5313528-5313547 None:intergenic 65.0%
GCGGCCGTAACGGCGTTTCA+CGG - chr6_4:5313828-5313847 None:intergenic 65.0%
ACGGCGTTTCGCGGCCGTAA+CGG - chr6_4:5313838-5313857 None:intergenic 65.0%
ACGGCCGCGAAACGCCGTTA+CGG + chr6_4:5313840-5313859 Msa0972980:intron 65.0%
AAAACTGCAGGTGGGGCCCG+CGG - chr6_4:5314108-5314127 None:intergenic 65.0%
TCGCGATCGCGGTCGCGTTA+AGG - chr6_4:5314653-5314672 None:intergenic 65.0%
!! GCACTTTGGAGTGTGGCCGG+TGG - chr6_4:5316058-5316077 None:intergenic 65.0%
GGGCCCGCGGTCAACAAGGA+AGG - chr6_4:5314095-5314114 None:intergenic 70.0%
AACGGTCGCGGTCGCGATCG+CGG - chr6_4:5314664-5314683 None:intergenic 70.0%
GGTGGGGCCCGCGGTCAACA+AGG - chr6_4:5314099-5314118 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr6_4 gene 5310817 5316763 5310817 ID=Msa0972980;Name=Msa0972980
chr6_4 mRNA 5310817 5316763 5310817 ID=Msa0972980-mRNA-1;Parent=Msa0972980;Name=Msa0972980-mRNA-1;_AED=0.05;_eAED=0.05;_QI=200|1|1|1|1|1|4|106|542
chr6_4 exon 5310817 5311071 5310817 ID=Msa0972980-mRNA-1:exon:2275;Parent=Msa0972980-mRNA-1
chr6_4 exon 5311707 5311924 5311707 ID=Msa0972980-mRNA-1:exon:2276;Parent=Msa0972980-mRNA-1
chr6_4 exon 5314886 5315412 5314886 ID=Msa0972980-mRNA-1:exon:2277;Parent=Msa0972980-mRNA-1
chr6_4 exon 5315829 5316763 5315829 ID=Msa0972980-mRNA-1:exon:2278;Parent=Msa0972980-mRNA-1
chr6_4 five_prime_UTR 5310817 5311016 5310817 ID=Msa0972980-mRNA-1:five_prime_utr;Parent=Msa0972980-mRNA-1
chr6_4 CDS 5311017 5311071 5311017 ID=Msa0972980-mRNA-1:cds;Parent=Msa0972980-mRNA-1
chr6_4 CDS 5311707 5311924 5311707 ID=Msa0972980-mRNA-1:cds;Parent=Msa0972980-mRNA-1
chr6_4 CDS 5314886 5315412 5314886 ID=Msa0972980-mRNA-1:cds;Parent=Msa0972980-mRNA-1
chr6_4 CDS 5315829 5316657 5315829 ID=Msa0972980-mRNA-1:cds;Parent=Msa0972980-mRNA-1
chr6_4 three_prime_UTR 5316658 5316763 5316658 ID=Msa0972980-mRNA-1:three_prime_utr;Parent=Msa0972980-mRNA-1
Gene Sequence

>Msa0972980

ATGGCTGGTGGACAGAAAACCAAGAGGCTCAGCAATTCATGCATTCTCCTCATAGTCATTGCAGGTATAGAGAGGTTTGCATTCAAAGGGGTAGCCTCAAATTTGGTAACTTATCTAACTGATGTTGTGGACTTAAGCAATTCATCTGCAGCAAAGATGGTTAATAGTTGGGTTGGATTCACTTCCATAATGCCATTGTTGGTGGCACCTATTGCTGATGCTTATTGGGCTAAATATTCCACCATAATGTCCTCATCTTTTCTCTATGTTATGGGACTTGCAGCATTGACAACAACAGCATTAGTAAGATCATGGCATCACAAAAACAGATCAATGTCATCTTCATTTCTTTCATTATCTCTCTATTTAATCTCATTAGGCCAAGGTGGATATAATCCATCTCTACAAGCCTTTGGAGCTGATCAACTTGGTGAAGATGAAGAACTACCTTGTAGTAACACAGATGACACAAGTAGCAACAAAAAAGCACTCTTCTTCCAATGGTGGTATTTTGGTGTTTGTGCTGGAAGCCTAATGGGTGTAACATTCATGTCTTACATCCAAGACACATTTGGTTGGGTAATAGGGTTTGCTATACCTGCGATTTCGATGGTTCTTTCTATCTTGATTTTCTCTAGTGGAAGCTCTATATATTCGTATAAACAACAAGATGATGATGATGATCTTCGAGATAAGAAGCCTTTCACGAACATGTTTAAGAGTATAAAAGAATCTGCATTGAAATGCTTCCATTGTGAAATTACTCTACCAAATGACAAGTCTGAAAATGTCGAACTAGAGCTTCAAGAGAGACCACTTTGTCGCGAAAACTGTGAAAGCATTAAGGTCATAAATAAGGATTCTAAAATCAGCATGTGTCTGCTACCAAATGTAAAGGTTATGATTAAGCTATTGCCTATATGGACAATGCTTCTCATGTTTGCAGTGATTTTCCAACAACCTGCAACTTTTTTCACCAAACAAGGCATGACAATGAAGAGAAACATAGGTTCAAATTTCAAGATACCACCGGCCACACTCCAAAGTGCGATAACATTGTCCATAATACTATTGATGCCGTTATACGACAGAGTTTTTATACCGTTCGCTCAGCTGATAACACGACAGGAAAAAGGTATAAACGTGATGCAAAGGATGGGAATCGGAATGGTTCTCTCAATCATAGCGATGATTATCGCGGCACTAGTTGAAATGAAACGCCTTGCTATCGGCCGACAAATGAGAAGTGAAGGATTACTATCAGAAATAGTACCAATAAGCATTTTCTGGTTGTTACCACAGTACATTCTTCTTGGTATATCAGATATTTTCACAGTGGTTGGTATGCAAGAATTTTTTTACGGTGAAGTTCCGAAGAATATGAGAACAATGGGAATCGCATTGTATACAAGTGTTTTCGGAGTTGGAAGCTTTGTTAGTGCATTGATGATTACACTTGTTGAAGTATACACAAGTTCAAAAGGAACTCCAAGTTGGTTTTCTGATGATATGGTCGAGGCACGTTTGGATAATTACTATTGGCTTCTAGCTTGGTTAAGTTCAATTAGCTTATTGTTGTATACACTATTGTGTAAATATTACTATAATAAGAGTGAATCAGATAGTTAA
Protein sequence

>Msa0972980

MAGGQKTKRLSNSCILLIVIAGIERFAFKGVASNLVTYLTDVVDLSNSSAAKMVNSWVGFTSIMPLLVAPIADAYWAKYSTIMSSSFLYVMGLAALTTTALVRSWHHKNRSMSSSFLSLSLYLISLGQGGYNPSLQAFGADQLGEDEELPCSNTDDTSSNKKALFFQWWYFGVCAGSLMGVTFMSYIQDTFGWVIGFAIPAISMVLSILIFSSGSSIYSYKQQDDDDDLRDKKPFTNMFKSIKESALKCFHCEITLPNDKSENVELELQERPLCRENCESIKVINKDSKISMCLLPNVKVMIKLLPIWTMLLMFAVIFQQPATFFTKQGMTMKRNIGSNFKIPPATLQSAITLSIILLMPLYDRVFIPFAQLITRQEKGINVMQRMGIGMVLSIIAMIIAALVEMKRLAIGRQMRSEGLLSEIVPISIFWLLPQYILLGISDIFTVVGMQEFFYGEVPKNMRTMGIALYTSVFGVGSFVSALMITLVEVYTSSKGTPSWFSDDMVEARLDNYYWLLAWLSSISLLLYTLLCKYYYNKSESDS*