Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0870330 | XP_003618370.2 | 98.339 | 542 | 8 | 1 | 1 | 542 | 1 | 541 | 0.0 | 1090 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0870330 | sp|Q9LFR1|PTR50_ARATH | 61.470 | 558 | 185 | 11 | 1 | 541 | 1 | 545 | 0.0 | 651 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0870330 | G7KJG0 | 98.339 | 542 | 8 | 1 | 1 | 542 | 1 | 541 | 0.0 | 1090 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0640380 | Msa0870330 | 0.805934 | 1.050495e-49 | -8.615850e-47 |
| Msa0678820 | Msa0870330 | 0.801915 | 7.187410e-49 | -8.615850e-47 |
| Msa0722930 | Msa0870330 | 0.808353 | 3.228737e-50 | -8.615850e-47 |
| Msa0723140 | Msa0870330 | 0.808094 | 3.667070e-50 | -8.615850e-47 |
| Msa0835920 | Msa0870330 | 0.817860 | 2.649292e-52 | -8.615850e-47 |
| Msa0543900 | Msa0870330 | 0.811175 | 7.985669e-51 | -8.615850e-47 |
| Msa0599770 | Msa0870330 | 0.802596 | 5.205292e-49 | -8.615850e-47 |
| Msa0843280 | Msa0870330 | 0.814524 | 1.474334e-51 | -8.615850e-47 |
| Msa0870330 | Msa0936040 | 0.899655 | 1.598037e-77 | -8.615850e-47 |
| Msa0870330 | Msa0972980 | 0.898541 | 4.797029e-77 | -8.615850e-47 |
| Msa0870330 | Msa1080790 | 0.815375 | 9.549113e-52 | -8.615850e-47 |
| Msa0870330 | Msa1118930 | 0.810661 | 1.031848e-50 | -8.615850e-47 |
| Msa0870330 | Msa1252070 | 0.803014 | 4.267126e-49 | -8.615850e-47 |
| Msa0870330 | Msa1292730 | 0.816646 | 4.968733e-52 | -8.615850e-47 |
| Msa0870330 | Msa1336960 | 0.904188 | 1.592553e-79 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0870330 | MtrunA17_Chr6g0451841 | 98.339 | 542 | 8 | 1 | 1 | 542 | 1 | 541 | 0.0 | 1090 |
| Msa0870330 | MtrunA17_Chr4g0014871 | 38.745 | 542 | 292 | 10 | 12 | 537 | 37 | 554 | 1.02e-129 | 390 |
| Msa0870330 | MtrunA17_Chr4g0014841 | 37.803 | 537 | 301 | 7 | 12 | 537 | 36 | 550 | 1.05e-126 | 382 |
| Msa0870330 | MtrunA17_Chr4g0014781 | 38.333 | 540 | 302 | 7 | 12 | 540 | 36 | 555 | 4.96e-126 | 380 |
| Msa0870330 | MtrunA17_Chr4g0014791 | 37.616 | 537 | 302 | 9 | 12 | 537 | 36 | 550 | 3.55e-125 | 378 |
| Msa0870330 | MtrunA17_Chr3g0077151 | 38.078 | 541 | 294 | 9 | 12 | 540 | 35 | 546 | 7.71e-125 | 377 |
| Msa0870330 | MtrunA17_Chr4g0014801 | 37.523 | 549 | 308 | 8 | 4 | 537 | 24 | 552 | 4.39e-122 | 370 |
| Msa0870330 | MtrunA17_Chr8g0353031 | 35.420 | 559 | 306 | 14 | 12 | 542 | 25 | 556 | 3.05e-114 | 350 |
| Msa0870330 | MtrunA17_Chr4g0008651 | 34.901 | 553 | 311 | 10 | 16 | 542 | 45 | 574 | 1.27e-113 | 349 |
| Msa0870330 | MtrunA17_Chr4g0005901 | 36.166 | 553 | 304 | 9 | 13 | 537 | 40 | 571 | 3.01e-111 | 343 |
| Msa0870330 | MtrunA17_Chr7g0240381 | 34.358 | 553 | 308 | 10 | 12 | 538 | 36 | 559 | 7.19e-110 | 339 |
| Msa0870330 | MtrunA17_Chr3g0112671 | 35.556 | 540 | 293 | 10 | 24 | 538 | 52 | 561 | 5.49e-109 | 337 |
| Msa0870330 | MtrunA17_Chr4g0014861 | 39.294 | 425 | 238 | 7 | 119 | 537 | 19 | 429 | 1.62e-108 | 331 |
| Msa0870330 | MtrunA17_Chr7g0241741 | 34.539 | 553 | 313 | 11 | 13 | 537 | 30 | 561 | 6.12e-108 | 334 |
| Msa0870330 | MtrunA17_Chr8g0375311 | 33.986 | 562 | 315 | 11 | 12 | 540 | 47 | 585 | 3.23e-106 | 330 |
| Msa0870330 | MtrunA17_Chr3g0112611 | 34.120 | 551 | 312 | 12 | 16 | 538 | 43 | 570 | 5.46e-106 | 330 |
| Msa0870330 | MtrunA17_Chr3g0114501 | 35.145 | 552 | 319 | 9 | 12 | 540 | 29 | 564 | 1.50e-105 | 328 |
| Msa0870330 | MtrunA17_Chr8g0375291 | 34.483 | 551 | 301 | 12 | 12 | 527 | 47 | 572 | 1.28e-101 | 318 |
| Msa0870330 | MtrunA17_Chr3g0104011 | 32.374 | 556 | 326 | 10 | 13 | 538 | 30 | 565 | 1.69e-98 | 309 |
| Msa0870330 | MtrunA17_Chr8g0375351 | 33.514 | 555 | 315 | 11 | 12 | 534 | 47 | 579 | 3.47e-98 | 309 |
| Msa0870330 | MtrunA17_Chr8g0375341 | 33.746 | 566 | 311 | 11 | 12 | 540 | 47 | 585 | 3.90e-98 | 309 |
| Msa0870330 | MtrunA17_Chr7g0261881 | 31.646 | 553 | 331 | 10 | 12 | 536 | 34 | 567 | 3.17e-95 | 301 |
| Msa0870330 | MtrunA17_Chr7g0261771 | 33.095 | 559 | 326 | 13 | 6 | 536 | 33 | 571 | 7.32e-95 | 301 |
| Msa0870330 | MtrunA17_Chr7g0261811 | 31.826 | 553 | 330 | 10 | 12 | 536 | 34 | 567 | 2.79e-94 | 299 |
| Msa0870330 | MtrunA17_Chr1g0187241 | 32.028 | 562 | 329 | 14 | 12 | 542 | 33 | 572 | 2.04e-93 | 297 |
| Msa0870330 | MtrunA17_Chr3g0142101 | 32.353 | 544 | 314 | 13 | 23 | 540 | 53 | 568 | 5.46e-91 | 290 |
| Msa0870330 | MtrunA17_Chr1g0166711 | 33.452 | 562 | 320 | 15 | 12 | 542 | 32 | 570 | 6.19e-91 | 290 |
| Msa0870330 | MtrunA17_Chr7g0261791 | 31.560 | 564 | 328 | 11 | 12 | 541 | 36 | 575 | 7.08e-91 | 290 |
| Msa0870330 | MtrunA17_Chr8g0375321 | 32.086 | 561 | 327 | 10 | 12 | 540 | 44 | 582 | 9.94e-91 | 290 |
| Msa0870330 | MtrunA17_Chr8g0375331 | 32.270 | 533 | 307 | 10 | 12 | 512 | 31 | 541 | 8.47e-88 | 281 |
| Msa0870330 | MtrunA17_Chr1g0166741 | 31.485 | 559 | 322 | 14 | 12 | 539 | 34 | 562 | 1.96e-87 | 281 |
| Msa0870330 | MtrunA17_Chr3g0082631 | 36.142 | 451 | 240 | 11 | 119 | 541 | 33 | 463 | 1.13e-86 | 276 |
| Msa0870330 | MtrunA17_Chr7g0261851 | 31.272 | 566 | 339 | 12 | 6 | 542 | 30 | 574 | 7.79e-86 | 277 |
| Msa0870330 | MtrunA17_Chr8g0375361 | 32.079 | 558 | 325 | 11 | 12 | 537 | 46 | 581 | 9.72e-85 | 274 |
| Msa0870330 | MtrunA17_Chr7g0217461 | 31.720 | 558 | 320 | 9 | 15 | 534 | 34 | 568 | 3.59e-83 | 270 |
| Msa0870330 | MtrunA17_Chr1g0166791 | 30.088 | 565 | 336 | 14 | 12 | 542 | 31 | 570 | 1.30e-82 | 268 |
| Msa0870330 | MtrunA17_Chr5g0399061 | 32.904 | 544 | 324 | 11 | 23 | 539 | 45 | 574 | 6.62e-82 | 266 |
| Msa0870330 | MtrunA17_Chr1g0166771 | 31.629 | 528 | 300 | 14 | 24 | 520 | 10 | 507 | 7.14e-82 | 265 |
| Msa0870330 | MtrunA17_Chr7g0255621 | 30.220 | 546 | 327 | 10 | 24 | 536 | 39 | 563 | 9.52e-82 | 266 |
| Msa0870330 | MtrunA17_Chr5g0415791 | 30.496 | 564 | 316 | 10 | 24 | 541 | 48 | 581 | 1.02e-81 | 266 |
| Msa0870330 | MtrunA17_Chr7g0261661 | 32.373 | 451 | 257 | 9 | 108 | 536 | 29 | 453 | 1.78e-81 | 263 |
| Msa0870330 | MtrunA17_Chr4g0054891 | 31.418 | 557 | 319 | 11 | 16 | 536 | 121 | 650 | 3.47e-81 | 267 |
| Msa0870330 | MtrunA17_Chr5g0399071 | 32.374 | 556 | 311 | 14 | 23 | 539 | 43 | 572 | 3.98e-81 | 265 |
| Msa0870330 | MtrunA17_Chr4g0056431 | 30.623 | 578 | 317 | 8 | 12 | 539 | 32 | 575 | 9.09e-81 | 264 |
| Msa0870330 | MtrunA17_Chr8g0362711 | 31.720 | 558 | 326 | 11 | 4 | 527 | 25 | 561 | 9.48e-81 | 263 |
| Msa0870330 | MtrunA17_Chr5g0422881 | 29.872 | 549 | 344 | 8 | 24 | 542 | 39 | 576 | 4.95e-80 | 261 |
| Msa0870330 | MtrunA17_Chr7g0214461 | 28.391 | 553 | 352 | 11 | 6 | 534 | 79 | 611 | 5.80e-77 | 254 |
| Msa0870330 | MtrunA17_Chr5g0400371 | 29.735 | 565 | 338 | 12 | 6 | 534 | 114 | 655 | 2.74e-75 | 251 |
| Msa0870330 | MtrunA17_Chr3g0142091 | 31.181 | 542 | 320 | 10 | 23 | 537 | 44 | 559 | 2.79e-75 | 249 |
| Msa0870330 | MtrunA17_Chr7g0255601 | 29.358 | 545 | 331 | 10 | 24 | 535 | 46 | 569 | 5.15e-75 | 249 |
| Msa0870330 | MtrunA17_Chr5g0415961 | 30.530 | 547 | 326 | 12 | 16 | 527 | 35 | 562 | 7.43e-75 | 248 |
| Msa0870330 | MtrunA17_Chr1g0213711 | 29.250 | 547 | 335 | 12 | 16 | 534 | 32 | 554 | 1.25e-74 | 247 |
| Msa0870330 | MtrunA17_Chr4g0059991 | 30.108 | 558 | 329 | 11 | 24 | 541 | 41 | 577 | 1.90e-73 | 244 |
| Msa0870330 | MtrunA17_Chr1g0166731 | 34.163 | 442 | 249 | 12 | 120 | 542 | 49 | 467 | 1.94e-73 | 241 |
| Msa0870330 | MtrunA17_Chr4g0059971 | 28.571 | 546 | 338 | 11 | 24 | 534 | 53 | 581 | 1.46e-72 | 242 |
| Msa0870330 | MtrunA17_Chr4g0059981 | 30.700 | 557 | 329 | 15 | 24 | 542 | 50 | 587 | 3.39e-72 | 241 |
| Msa0870330 | MtrunA17_Chr7g0255611 | 29.908 | 545 | 328 | 11 | 24 | 535 | 48 | 571 | 1.16e-70 | 237 |
| Msa0870330 | MtrunA17_Chr8g0362781 | 28.272 | 573 | 320 | 11 | 23 | 540 | 48 | 584 | 4.91e-70 | 235 |
| Msa0870330 | MtrunA17_Chr2g0276751 | 28.857 | 551 | 344 | 11 | 11 | 540 | 44 | 567 | 2.07e-69 | 234 |
| Msa0870330 | MtrunA17_Chr4g0063591 | 30.419 | 549 | 336 | 10 | 16 | 539 | 33 | 560 | 4.40e-69 | 232 |
| Msa0870330 | MtrunA17_Chr8g0390331 | 30.055 | 549 | 326 | 14 | 24 | 539 | 34 | 557 | 5.88e-68 | 229 |
| Msa0870330 | MtrunA17_Chr2g0284701 | 26.620 | 571 | 359 | 10 | 12 | 540 | 39 | 591 | 1.73e-67 | 229 |
| Msa0870330 | MtrunA17_Chr7g0218851 | 27.128 | 564 | 356 | 14 | 1 | 534 | 43 | 581 | 6.44e-67 | 227 |
| Msa0870330 | MtrunA17_Chr4g0011471 | 29.358 | 545 | 322 | 9 | 27 | 534 | 38 | 556 | 6.83e-67 | 226 |
| Msa0870330 | MtrunA17_Chr5g0439381 | 28.445 | 566 | 310 | 13 | 24 | 541 | 47 | 565 | 1.13e-64 | 221 |
| Msa0870330 | MtrunA17_Chr7g0261751 | 30.040 | 496 | 270 | 10 | 6 | 441 | 33 | 511 | 3.45e-64 | 218 |
| Msa0870330 | MtrunA17_Chr1g0157601 | 28.029 | 553 | 339 | 13 | 16 | 534 | 26 | 553 | 2.01e-63 | 217 |
| Msa0870330 | MtrunA17_Chr1g0193391 | 29.032 | 558 | 353 | 12 | 5 | 542 | 17 | 551 | 4.02e-63 | 217 |
| Msa0870330 | MtrunA17_Chr2g0331521 | 28.125 | 576 | 351 | 16 | 5 | 542 | 20 | 570 | 4.89e-63 | 216 |
| Msa0870330 | MtrunA17_Chr3g0112631 | 40.417 | 240 | 142 | 1 | 299 | 538 | 35 | 273 | 6.71e-63 | 207 |
| Msa0870330 | MtrunA17_Chr7g0271221 | 29.295 | 553 | 358 | 10 | 5 | 542 | 17 | 551 | 8.08e-63 | 216 |
| Msa0870330 | MtrunA17_Chr4g0003761 | 28.470 | 562 | 333 | 16 | 16 | 538 | 41 | 572 | 1.34e-61 | 213 |
| Msa0870330 | MtrunA17_Chr3g0133341 | 28.042 | 567 | 348 | 12 | 8 | 541 | 15 | 554 | 1.43e-61 | 212 |
| Msa0870330 | MtrunA17_Chr4g0011041 | 28.700 | 554 | 346 | 13 | 12 | 534 | 43 | 578 | 1.83e-61 | 212 |
| Msa0870330 | MtrunA17_Chr1g0157611 | 29.068 | 547 | 341 | 11 | 16 | 534 | 27 | 554 | 2.82e-61 | 211 |
| Msa0870330 | MtrunA17_Chr1g0147631 | 27.636 | 550 | 346 | 11 | 16 | 534 | 36 | 564 | 3.74e-61 | 211 |
| Msa0870330 | MtrunA17_Chr8g0379971 | 27.037 | 540 | 322 | 12 | 22 | 506 | 37 | 559 | 2.79e-60 | 209 |
| Msa0870330 | MtrunA17_Chr1g0177591 | 28.839 | 534 | 322 | 15 | 30 | 538 | 67 | 567 | 4.77e-60 | 208 |
| Msa0870330 | MtrunA17_Chr2g0331471 | 27.817 | 568 | 356 | 16 | 5 | 538 | 85 | 632 | 5.31e-60 | 211 |
| Msa0870330 | MtrunA17_Chr4g0060001 | 28.080 | 552 | 326 | 14 | 24 | 534 | 48 | 569 | 3.57e-59 | 206 |
| Msa0870330 | MtrunA17_Chr2g0331481 | 27.622 | 572 | 360 | 16 | 1 | 538 | 18 | 569 | 4.03e-59 | 207 |
| Msa0870330 | MtrunA17_Chr1g0177631 | 31.891 | 439 | 243 | 14 | 123 | 538 | 33 | 438 | 3.12e-58 | 200 |
| Msa0870330 | MtrunA17_Chr8g0362801 | 27.533 | 454 | 281 | 8 | 108 | 537 | 32 | 461 | 7.21e-58 | 200 |
| Msa0870330 | MtrunA17_Chr1g0157621 | 29.220 | 551 | 306 | 14 | 30 | 534 | 5 | 517 | 8.00e-58 | 202 |
| Msa0870330 | MtrunA17_Chr8g0379991 | 26.888 | 543 | 316 | 11 | 30 | 506 | 5 | 532 | 4.68e-57 | 200 |
| Msa0870330 | MtrunA17_Chr1g0177611 | 30.524 | 439 | 249 | 14 | 123 | 538 | 33 | 438 | 5.68e-55 | 191 |
| Msa0870330 | MtrunA17_Chr2g0331511 | 26.598 | 579 | 356 | 16 | 1 | 538 | 15 | 565 | 2.61e-54 | 194 |
| Msa0870330 | MtrunA17_Chr5g0415841 | 28.409 | 440 | 268 | 10 | 120 | 535 | 42 | 458 | 7.96e-54 | 189 |
| Msa0870330 | MtrunA17_Chr7g0214731 | 26.277 | 548 | 359 | 11 | 24 | 539 | 80 | 614 | 8.57e-54 | 192 |
| Msa0870330 | MtrunA17_Chr7g0240271 | 26.374 | 546 | 350 | 11 | 24 | 536 | 43 | 569 | 1.59e-53 | 191 |
| Msa0870330 | MtrunA17_Chr4g0069581 | 26.047 | 549 | 341 | 12 | 23 | 539 | 4 | 519 | 5.78e-53 | 189 |
| Msa0870330 | MtrunA17_Chr2g0331461 | 26.631 | 567 | 366 | 14 | 1 | 535 | 18 | 566 | 1.12e-51 | 186 |
| Msa0870330 | MtrunA17_Chr3g0142121 | 34.601 | 263 | 161 | 3 | 278 | 540 | 19 | 270 | 1.61e-50 | 175 |
| Msa0870330 | MtrunA17_Chr2g0326211 | 25.400 | 563 | 360 | 10 | 1 | 536 | 16 | 545 | 1.88e-48 | 176 |
| Msa0870330 | MtrunA17_Chr2g0325951 | 25.187 | 536 | 344 | 11 | 27 | 536 | 41 | 545 | 2.62e-48 | 176 |
| Msa0870330 | MtrunA17_Chr2g0325961 | 25.872 | 545 | 343 | 12 | 20 | 536 | 35 | 546 | 3.45e-48 | 175 |
| Msa0870330 | MtrunA17_Chr7g0234181 | 30.913 | 427 | 248 | 11 | 116 | 534 | 26 | 413 | 2.98e-47 | 170 |
| Msa0870330 | MtrunA17_Chr4g0060071 | 34.328 | 268 | 169 | 4 | 277 | 541 | 39 | 302 | 3.37e-47 | 166 |
| Msa0870330 | MtrunA17_Chr7g0240281 | 25.180 | 556 | 342 | 10 | 24 | 534 | 43 | 569 | 1.34e-46 | 172 |
| Msa0870330 | MtrunA17_Chr7g0240131 | 27.578 | 446 | 275 | 12 | 115 | 534 | 33 | 456 | 6.20e-44 | 162 |
| Msa0870330 | MtrunA17_Chr7g0235521 | 27.578 | 446 | 275 | 12 | 115 | 534 | 33 | 456 | 2.07e-43 | 160 |
| Msa0870330 | MtrunA17_Chr7g0240211 | 27.314 | 443 | 280 | 11 | 115 | 534 | 33 | 456 | 6.87e-43 | 159 |
| Msa0870330 | MtrunA17_Chr7g0240181 | 27.314 | 443 | 280 | 11 | 115 | 534 | 33 | 456 | 7.08e-43 | 159 |
| Msa0870330 | MtrunA17_Chr7g0261721 | 36.634 | 202 | 126 | 2 | 336 | 536 | 1 | 201 | 1.18e-42 | 152 |
| Msa0870330 | MtrunA17_Chr7g0234151 | 29.358 | 436 | 251 | 9 | 112 | 534 | 27 | 418 | 2.94e-40 | 150 |
| Msa0870330 | MtrunA17_Chr7g0234381 | 28.842 | 423 | 262 | 8 | 116 | 534 | 31 | 418 | 5.09e-40 | 150 |
| Msa0870330 | MtrunA17_Chr7g0240151 | 26.269 | 453 | 254 | 13 | 115 | 534 | 33 | 438 | 8.25e-38 | 145 |
| Msa0870330 | MtrunA17_Chr7g0261731 | 29.641 | 334 | 179 | 9 | 6 | 307 | 33 | 342 | 1.60e-36 | 139 |
| Msa0870330 | MtrunA17_Chr3g0142111 | 33.898 | 236 | 130 | 4 | 23 | 248 | 64 | 283 | 6.86e-33 | 128 |
| Msa0870330 | MtrunA17_Chr2g0326221 | 25.943 | 212 | 126 | 5 | 328 | 539 | 44 | 224 | 3.05e-20 | 89.7 |
| Msa0870330 | MtrunA17_Chr3g0112651 | 36.752 | 117 | 66 | 1 | 110 | 226 | 46 | 154 | 1.79e-19 | 87.0 |
| Msa0870330 | MtrunA17_Chr4g0060061 | 34.646 | 127 | 68 | 2 | 114 | 240 | 16 | 127 | 4.98e-14 | 69.3 |
| Msa0870330 | MtrunA17_Chr1g0147591 | 33.333 | 96 | 59 | 1 | 123 | 218 | 9 | 99 | 9.86e-13 | 67.4 |
| Msa0870330 | MtrunA17_Chr3g0082621 | 44.118 | 68 | 38 | 0 | 24 | 91 | 5 | 72 | 7.38e-12 | 61.6 |
| Msa0870330 | MtrunA17_Chr7g0261831 | 26.712 | 146 | 92 | 3 | 254 | 384 | 14 | 159 | 8.14e-12 | 65.1 |
| Msa0870330 | MtrunA17_Chr4g0014851 | 40.506 | 79 | 47 | 0 | 13 | 91 | 38 | 116 | 1.69e-11 | 62.8 |
| Msa0870330 | MtrunA17_Chr3g0112661 | 44.118 | 68 | 38 | 0 | 24 | 91 | 50 | 117 | 2.93e-11 | 61.6 |
| Msa0870330 | MtrunA17_Chr1g0147581 | 30.579 | 121 | 78 | 2 | 390 | 510 | 1 | 115 | 9.85e-11 | 59.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0870330 | AT5G14940.1 | 61.470 | 558 | 185 | 11 | 1 | 541 | 1 | 545 | 0.0 | 651 |
| Msa0870330 | AT3G01350.1 | 60.036 | 553 | 201 | 8 | 5 | 541 | 5 | 553 | 0.0 | 613 |
| Msa0870330 | AT1G22540.1 | 40.840 | 524 | 282 | 6 | 24 | 537 | 47 | 552 | 1.77e-130 | 392 |
| Msa0870330 | AT1G72140.1 | 38.910 | 532 | 276 | 11 | 24 | 536 | 51 | 552 | 1.51e-124 | 377 |
| Msa0870330 | AT1G72120.1 | 39.065 | 535 | 295 | 8 | 12 | 534 | 34 | 549 | 8.11e-123 | 372 |
| Msa0870330 | AT1G72125.1 | 39.212 | 533 | 277 | 10 | 24 | 534 | 46 | 553 | 5.02e-122 | 370 |
| Msa0870330 | AT1G72130.1 | 36.716 | 542 | 310 | 8 | 2 | 540 | 26 | 537 | 1.09e-120 | 366 |
| Msa0870330 | AT3G54450.1 | 35.929 | 565 | 306 | 14 | 5 | 541 | 10 | 546 | 8.70e-118 | 359 |
| Msa0870330 | AT1G22550.1 | 37.288 | 531 | 292 | 9 | 24 | 534 | 47 | 556 | 5.97e-114 | 349 |
| Msa0870330 | AT3G53960.1 | 34.403 | 561 | 306 | 11 | 12 | 538 | 42 | 574 | 9.18e-106 | 330 |
| Msa0870330 | AT2G37900.1 | 33.810 | 559 | 312 | 10 | 12 | 542 | 43 | 571 | 2.70e-105 | 327 |
| Msa0870330 | AT1G22570.2 | 36.047 | 516 | 282 | 12 | 24 | 515 | 10 | 501 | 1.47e-103 | 322 |
| Msa0870330 | AT1G22570.1 | 35.606 | 528 | 292 | 12 | 12 | 515 | 35 | 538 | 3.26e-103 | 322 |
| Msa0870330 | AT5G01180.2 | 32.740 | 562 | 323 | 12 | 13 | 542 | 31 | 569 | 3.32e-102 | 319 |
| Msa0870330 | AT5G01180.3 | 32.740 | 562 | 323 | 12 | 13 | 542 | 31 | 569 | 3.32e-102 | 319 |
| Msa0870330 | AT5G01180.1 | 32.740 | 562 | 323 | 12 | 13 | 542 | 31 | 569 | 3.32e-102 | 319 |
| Msa0870330 | AT2G40460.1 | 33.868 | 561 | 323 | 11 | 6 | 542 | 24 | 560 | 8.70e-102 | 318 |
| Msa0870330 | AT3G54140.1 | 33.214 | 557 | 320 | 10 | 13 | 538 | 30 | 565 | 5.01e-101 | 316 |
| Msa0870330 | AT3G54140.2 | 33.214 | 557 | 320 | 10 | 13 | 538 | 30 | 565 | 5.01e-101 | 316 |
| Msa0870330 | AT1G72130.2 | 36.792 | 424 | 242 | 6 | 119 | 540 | 20 | 419 | 4.63e-99 | 306 |
| Msa0870330 | AT1G72130.3 | 36.792 | 424 | 242 | 6 | 119 | 540 | 20 | 419 | 4.63e-99 | 306 |
| Msa0870330 | AT2G37900.2 | 33.973 | 521 | 286 | 10 | 50 | 542 | 2 | 492 | 5.26e-98 | 306 |
| Msa0870330 | AT2G02040.1 | 32.793 | 555 | 331 | 10 | 12 | 540 | 46 | 584 | 4.69e-97 | 306 |
| Msa0870330 | AT1G62200.1 | 32.916 | 559 | 314 | 8 | 12 | 537 | 57 | 587 | 2.71e-94 | 299 |
| Msa0870330 | AT2G02020.1 | 33.766 | 539 | 303 | 12 | 12 | 537 | 47 | 544 | 1.59e-92 | 293 |
| Msa0870330 | AT1G62200.2 | 32.007 | 578 | 323 | 9 | 12 | 537 | 57 | 616 | 1.60e-90 | 290 |
| Msa0870330 | AT1G62200.3 | 32.007 | 578 | 323 | 9 | 12 | 537 | 71 | 630 | 2.20e-90 | 290 |
| Msa0870330 | AT5G46040.1 | 30.864 | 567 | 341 | 10 | 4 | 539 | 20 | 566 | 2.60e-84 | 273 |
| Msa0870330 | AT1G27040.3 | 31.801 | 544 | 329 | 9 | 14 | 534 | 2 | 526 | 5.91e-82 | 266 |
| Msa0870330 | AT1G27040.2 | 31.949 | 554 | 333 | 10 | 4 | 534 | 22 | 554 | 8.58e-82 | 266 |
| Msa0870330 | AT1G27040.1 | 31.949 | 554 | 333 | 10 | 4 | 534 | 26 | 558 | 1.14e-81 | 266 |
| Msa0870330 | AT2G02020.2 | 32.653 | 539 | 288 | 14 | 12 | 537 | 47 | 523 | 1.39e-81 | 264 |
| Msa0870330 | AT5G46050.1 | 30.125 | 561 | 340 | 12 | 12 | 542 | 32 | 570 | 1.19e-80 | 263 |
| Msa0870330 | AT1G69850.1 | 31.218 | 583 | 336 | 15 | 4 | 542 | 24 | 585 | 8.30e-79 | 259 |
| Msa0870330 | AT4G21680.1 | 31.228 | 570 | 324 | 14 | 13 | 540 | 34 | 577 | 6.29e-77 | 254 |
| Msa0870330 | AT1G69870.1 | 29.529 | 552 | 328 | 9 | 23 | 537 | 67 | 594 | 6.51e-77 | 254 |
| Msa0870330 | AT1G32450.1 | 31.103 | 553 | 332 | 11 | 15 | 534 | 45 | 581 | 2.55e-76 | 253 |
| Msa0870330 | AT2G26690.1 | 30.199 | 553 | 337 | 11 | 13 | 539 | 30 | 559 | 6.19e-76 | 251 |
| Msa0870330 | AT2G26690.2 | 30.387 | 543 | 329 | 11 | 23 | 539 | 7 | 526 | 6.40e-76 | 250 |
| Msa0870330 | AT1G68570.2 | 30.165 | 547 | 331 | 10 | 24 | 537 | 10 | 538 | 2.34e-75 | 249 |
| Msa0870330 | AT1G68570.1 | 30.165 | 547 | 331 | 10 | 24 | 537 | 40 | 568 | 3.12e-75 | 249 |
| Msa0870330 | AT2G26690.3 | 30.410 | 536 | 324 | 11 | 30 | 539 | 2 | 514 | 3.09e-74 | 245 |
| Msa0870330 | AT5G62730.2 | 29.326 | 549 | 337 | 11 | 16 | 539 | 6 | 528 | 6.98e-74 | 244 |
| Msa0870330 | AT5G62730.1 | 29.234 | 561 | 344 | 12 | 4 | 539 | 55 | 587 | 1.18e-73 | 245 |
| Msa0870330 | AT5G19640.1 | 28.571 | 567 | 324 | 13 | 13 | 541 | 65 | 588 | 1.85e-72 | 243 |
| Msa0870330 | AT1G12110.1 | 29.066 | 578 | 320 | 12 | 13 | 539 | 33 | 571 | 6.64e-71 | 238 |
| Msa0870330 | AT5G46050.2 | 31.293 | 441 | 263 | 10 | 120 | 542 | 40 | 458 | 1.57e-68 | 228 |
| Msa0870330 | AT1G18880.1 | 27.949 | 551 | 340 | 11 | 24 | 537 | 36 | 566 | 7.33e-68 | 230 |
| Msa0870330 | AT1G59740.1 | 28.877 | 561 | 336 | 12 | 18 | 542 | 49 | 582 | 9.72e-67 | 227 |
| Msa0870330 | AT3G16180.1 | 29.514 | 576 | 336 | 18 | 7 | 538 | 19 | 568 | 5.67e-66 | 225 |
| Msa0870330 | AT3G21670.1 | 29.197 | 548 | 323 | 12 | 24 | 539 | 46 | 560 | 1.81e-65 | 223 |
| Msa0870330 | AT1G52190.1 | 28.472 | 576 | 341 | 16 | 4 | 535 | 18 | 566 | 1.50e-62 | 216 |
| Msa0870330 | AT1G33440.1 | 27.143 | 560 | 338 | 12 | 11 | 534 | 42 | 567 | 7.88e-62 | 214 |
| Msa0870330 | AT3G25260.1 | 27.810 | 525 | 328 | 11 | 19 | 534 | 33 | 515 | 1.21e-60 | 209 |
| Msa0870330 | AT1G27080.1 | 27.387 | 555 | 335 | 11 | 23 | 541 | 30 | 552 | 1.24e-59 | 207 |
| Msa0870330 | AT5G62680.1 | 25.355 | 564 | 348 | 10 | 24 | 541 | 60 | 596 | 1.87e-58 | 205 |
| Msa0870330 | AT1G27080.2 | 27.407 | 540 | 324 | 11 | 38 | 541 | 3 | 510 | 7.40e-57 | 199 |
| Msa0870330 | AT5G13400.1 | 26.703 | 558 | 347 | 10 | 24 | 541 | 81 | 616 | 9.62e-57 | 201 |
| Msa0870330 | AT1G69860.1 | 27.289 | 546 | 344 | 14 | 23 | 541 | 34 | 553 | 4.16e-56 | 197 |
| Msa0870330 | AT3G47960.1 | 25.405 | 555 | 357 | 11 | 24 | 541 | 78 | 612 | 8.08e-56 | 198 |
| Msa0870330 | AT3G45720.1 | 25.788 | 539 | 332 | 12 | 34 | 542 | 46 | 546 | 5.76e-55 | 194 |
| Msa0870330 | AT5G28470.2 | 28.073 | 545 | 343 | 14 | 24 | 539 | 34 | 558 | 3.05e-53 | 190 |
| Msa0870330 | AT3G45660.1 | 27.103 | 535 | 324 | 14 | 30 | 536 | 44 | 540 | 7.78e-53 | 189 |
| Msa0870330 | AT3G45660.3 | 27.103 | 535 | 324 | 14 | 30 | 536 | 44 | 540 | 7.78e-53 | 189 |
| Msa0870330 | AT3G45660.2 | 27.103 | 535 | 324 | 14 | 30 | 536 | 65 | 561 | 1.34e-52 | 188 |
| Msa0870330 | AT5G11570.1 | 27.106 | 546 | 315 | 12 | 1 | 537 | 7 | 478 | 2.22e-52 | 186 |
| Msa0870330 | AT3G45650.1 | 26.692 | 532 | 322 | 14 | 34 | 536 | 49 | 541 | 4.63e-52 | 186 |
| Msa0870330 | AT3G45680.1 | 24.334 | 563 | 349 | 12 | 16 | 541 | 30 | 552 | 3.14e-51 | 184 |
| Msa0870330 | AT5G28470.1 | 27.890 | 545 | 342 | 15 | 24 | 539 | 34 | 556 | 2.37e-50 | 182 |
| Msa0870330 | AT3G25280.1 | 25.898 | 529 | 345 | 9 | 16 | 534 | 30 | 521 | 1.07e-49 | 179 |
| Msa0870330 | AT3G45700.1 | 24.816 | 544 | 345 | 14 | 16 | 535 | 26 | 529 | 1.42e-47 | 174 |
| Msa0870330 | AT3G45650.2 | 25.806 | 558 | 320 | 16 | 34 | 536 | 49 | 567 | 8.46e-47 | 172 |
| Msa0870330 | AT3G45710.1 | 22.909 | 550 | 355 | 13 | 16 | 535 | 31 | 541 | 3.39e-45 | 167 |
| Msa0870330 | AT3G45690.1 | 21.739 | 529 | 310 | 13 | 34 | 535 | 45 | 496 | 1.01e-31 | 129 |
| Msa0870330 | AT2G38100.2 | 25.741 | 540 | 318 | 19 | 35 | 541 | 2 | 491 | 9.80e-31 | 125 |
| Msa0870330 | AT2G38100.1 | 25.741 | 540 | 318 | 19 | 35 | 541 | 18 | 507 | 1.81e-30 | 125 |
| Msa0870330 | AT2G38100.3 | 25.741 | 540 | 318 | 19 | 35 | 541 | 24 | 513 | 2.00e-30 | 125 |
Find 97 sgRNAs with CRISPR-Local
Find 261 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTTCCAATGGTGGTATTT+TGG | 0.171223 | 6_1:-4712571 | Msa0870330:CDS |
| CACCTATTGCTGATGCTTAT+TGG | 0.205664 | 6_1:-4714615 | Msa0870330:CDS |
| GACACATTTGGTTGGGTAAT+AGG | 0.231752 | 6_1:-4712499 | Msa0870330:CDS |
| CAAAGGGGTAGCCTCAAATT+TGG | 0.254691 | 6_1:-4714737 | Msa0870330:CDS |
| TGATTAAGCTATTGCCTATA+TGG | 0.259511 | 6_1:-4711487 | Msa0870330:CDS |
| GTAACAGAGTTAGAACTATT+TGG | 0.262905 | 6_1:-4715654 | Msa0870330:five_prime_UTR |
| ACCTATTGCTGATGCTTATT+GGG | 0.269588 | 6_1:-4714614 | Msa0870330:CDS |
| TTAAGGTACTATACAAATAT+TGG | 0.271436 | 6_1:+4715604 | None:intergenic |
| CATTTGGTATCTTCTTATAA+TGG | 0.282553 | 6_1:-4715457 | Msa0870330:exon |
| CAAAGTGTAGGTTTGGATAT+TGG | 0.288179 | 6_1:-4715500 | Msa0870330:intron |
| TTACCACAGTACATTCTTCT+TGG | 0.292712 | 6_1:-4711095 | Msa0870330:CDS |
| ACACATTTGGTTGGGTAATA+GGG | 0.306033 | 6_1:-4712498 | Msa0870330:CDS |
| TAACGGCATTAACAGTATTA+TGG | 0.311123 | 6_1:+4711328 | None:intergenic |
| AACAACCAGAAAATGCTTAT+TGG | 0.321275 | 6_1:+4711116 | None:intergenic |
| CTGATAACACGACAGGAAAA+AGG | 0.335435 | 6_1:-4711275 | Msa0870330:CDS |
| TCTCTCTATTTAATCTCATT+AGG | 0.346870 | 6_1:-4712706 | Msa0870330:CDS |
| GTTTCCACATGATCATGTTT+TGG | 0.359186 | 6_1:+4715576 | None:intergenic |
| CCCATTGTTCTCATATTCTT+CGG | 0.363879 | 6_1:+4711017 | None:intergenic |
| GAGAAAAGATGAGGACATTA+TGG | 0.364757 | 6_1:+4714579 | None:intergenic |
| AAGCATTAAGGTCATAAATA+AGG | 0.365962 | 6_1:-4711552 | Msa0870330:CDS |
| TGCCACCAACAATGGCATTA+TGG | 0.367205 | 6_1:+4714636 | None:intergenic |
| TGTTTGTGCTGGAAGCCTAA+TGG | 0.372172 | 6_1:-4712548 | Msa0870330:CDS |
| GCTATATTAATATGATATAA+TGG | 0.375823 | 6_1:+4710689 | None:intergenic |
| CACTTCCATAATGCCATTGT+TGG | 0.382096 | 6_1:-4714641 | Msa0870330:CDS |
| CACGTTTGGATAATTACTAT+TGG | 0.386424 | 6_1:-4710869 | Msa0870330:CDS |
| CGAAAACTGTGAAAGCATTA+AGG | 0.391903 | 6_1:-4711564 | Msa0870330:CDS |
| CAGCAAAGATGGTTAATAGT+TGG | 0.392002 | 6_1:-4714672 | Msa0870330:CDS |
| GTTTGTGCTGGAAGCCTAAT+GGG | 0.410630 | 6_1:-4712547 | Msa0870330:CDS |
| TTAATCATAACCTTTACATT+TGG | 0.412053 | 6_1:+4711503 | None:intergenic |
| TGGTATCTTCTTATAATGGC+TGG | 0.414363 | 6_1:-4715453 | Msa0870330:exon |
| AATCCATCTCTACAAGCCTT+TGG | 0.428240 | 6_1:-4712670 | Msa0870330:CDS |
| TCTTACATCCAAGACACATT+TGG | 0.430307 | 6_1:-4712511 | Msa0870330:CDS |
| TAGATAAGTTACCAAATTTG+AGG | 0.430421 | 6_1:+4714726 | None:intergenic |
| AGCAAAGATGGTTAATAGTT+GGG | 0.441043 | 6_1:-4714671 | Msa0870330:CDS |
| CATCCAAGACACATTTGGTT+GGG | 0.442138 | 6_1:-4712506 | Msa0870330:CDS |
| CAACTCATCTGCAGCAAAGA+TGG | 0.445771 | 6_1:-4714683 | Msa0870330:CDS |
| ATGAGAAGCATTGTCCATAT+AGG | 0.448966 | 6_1:+4711473 | None:intergenic |
| TGATATGGTCGAGGCACGTT+TGG | 0.450686 | 6_1:-4710883 | Msa0870330:CDS |
| AATTCATGCATTCTCCTCAT+AGG | 0.453128 | 6_1:-4715405 | Msa0870330:intron |
| ATTACTATTGGCTTCTAGCT+TGG | 0.455302 | 6_1:-4710857 | Msa0870330:CDS |
| GAAGTATACACAAGTTCAAA+AGG | 0.460982 | 6_1:-4710927 | Msa0870330:CDS |
| GCCCAATAAGCATCAGCAAT+AGG | 0.462037 | 6_1:+4714613 | None:intergenic |
| ACATGAATGTTACACCCATT+AGG | 0.462461 | 6_1:+4712533 | None:intergenic |
| TAGAGAGGTTTGCATTCAAA+GGG | 0.464940 | 6_1:-4714753 | Msa0870330:CDS |
| CCGAAGAATATGAGAACAAT+GGG | 0.466258 | 6_1:-4711017 | Msa0870330:CDS |
| GCCTTTGGAGCTGATCAACT+TGG | 0.472222 | 6_1:-4712655 | Msa0870330:CDS |
| GCATGAATTGCTGAGCCTCT+TGG | 0.476082 | 6_1:+4715419 | None:intergenic |
| AAGATGGTTAATAGTTGGGT+TGG | 0.477748 | 6_1:-4714667 | Msa0870330:CDS |
| TGGACAATGTTATAGCACTT+TGG | 0.479628 | 6_1:+4711348 | None:intergenic |
| GCTCCAAAGGCTTGTAGAGA+TGG | 0.488186 | 6_1:+4712667 | None:intergenic |
| TTCCATAATGCCATTGTTGG+TGG | 0.499004 | 6_1:-4714638 | Msa0870330:CDS |
| TCACATAGAATTTACCTATG+AGG | 0.501710 | 6_1:+4715391 | None:intergenic |
| CACTTTGGAGTGTGGCCGGT+GGG | 0.502069 | 6_1:+4711363 | None:intergenic |
| TTACCCAACCAAATGTGTCT+TGG | 0.508468 | 6_1:+4712503 | None:intergenic |
| ATAGAGAGGTTTGCATTCAA+AGG | 0.511614 | 6_1:-4714754 | Msa0870330:CDS |
| CTCTTAAACATGTTCGTGAA+AGG | 0.511777 | 6_1:+4712364 | None:intergenic |
| ACATCCAAGACACATTTGGT+TGG | 0.514558 | 6_1:-4712507 | Msa0870330:CDS |
| ACTTCTCATTTGTCGACCGA+TGG | 0.517246 | 6_1:+4711163 | None:intergenic |
| AAACACCAAAATACCACCAT+TGG | 0.524353 | 6_1:+4712566 | None:intergenic |
| ACCAAGTTGATCAGCTCCAA+AGG | 0.526037 | 6_1:+4712654 | None:intergenic |
| AACTTATCTAACTGATGTTG+TGG | 0.535055 | 6_1:-4714713 | Msa0870330:CDS |
| GTGTCTGCTACCAAATGTAA+AGG | 0.535911 | 6_1:-4711513 | Msa0870330:CDS |
| GAAATGAAACGCCTTGCCAT+CGG | 0.541832 | 6_1:-4711179 | Msa0870330:CDS |
| GTGATGCAAAGGATGGGAAT+CGG | 0.543695 | 6_1:-4711245 | Msa0870330:CDS |
| CGCTCAGCTGATAACACGAC+AGG | 0.545338 | 6_1:-4711282 | Msa0870330:CDS |
| TATAAACGTGATGCAAAGGA+TGG | 0.549790 | 6_1:-4711252 | Msa0870330:CDS |
| CAACAGCACTAGCAAGATCA+TGG | 0.549961 | 6_1:-4712771 | Msa0870330:CDS |
| TGTTATAGCACTTTGGAGTG+TGG | 0.558276 | 6_1:+4711355 | None:intergenic |
| TATTTAATCTCATTAGGCCA+AGG | 0.562331 | 6_1:-4712700 | Msa0870330:CDS |
| TCATTTGTCGACCGATGGCA+AGG | 0.563067 | 6_1:+4711168 | None:intergenic |
| CGTGTTATCAGCTGAGCGAA+CGG | 0.563262 | 6_1:+4711287 | None:intergenic |
| ATAGCACTTTGGAGTGTGGC+CGG | 0.564600 | 6_1:+4711359 | None:intergenic |
| GTTCAAAAGGAACTCCAAGT+TGG | 0.566715 | 6_1:-4710914 | Msa0870330:CDS |
| CAGTCATTGCAGGTATAGAG+AGG | 0.569066 | 6_1:-4714768 | Msa0870330:CDS |
| AAGGTATAAACGTGATGCAA+AGG | 0.571082 | 6_1:-4711256 | Msa0870330:CDS |
| ATGACAATGAAGAGAAACAT+AGG | 0.572423 | 6_1:-4711401 | Msa0870330:CDS |
| GCACTTTGGAGTGTGGCCGG+TGG | 0.580031 | 6_1:+4711362 | None:intergenic |
| GGTCGACAAATGAGAAGTGA+AGG | 0.581178 | 6_1:-4711158 | Msa0870330:CDS |
| AAAAGATGAGGACATTATGG+TGG | 0.581494 | 6_1:+4714582 | None:intergenic |
| GAAAGAAGCATCGAAATCGC+AGG | 0.584602 | 6_1:+4712466 | None:intergenic |
| TCCGAAGAATATGAGAACAA+TGG | 0.585411 | 6_1:-4711018 | Msa0870330:CDS |
| GTGTCATCTGTGTTACTACA+AGG | 0.595088 | 6_1:+4712616 | None:intergenic |
| TTCAAATTTCAAGATCCCAC+CGG | 0.597703 | 6_1:-4711378 | Msa0870330:CDS |
| TATCTTCTTATAATGGCTGG+TGG | 0.599636 | 6_1:-4715450 | Msa0870330:exon |
| GCAAAGGATGGGAATCGGAA+TGG | 0.602918 | 6_1:-4711240 | Msa0870330:CDS |
| AAAACCAAAACATGATCATG+TGG | 0.611772 | 6_1:-4715580 | Msa0870330:five_prime_UTR |
| ATATCATCAGAAAACCAACT+TGG | 0.615024 | 6_1:+4710900 | None:intergenic |
| ATAAACGTGATGCAAAGGAT+GGG | 0.622044 | 6_1:-4711251 | Msa0870330:CDS |
| GAGATGGATTATATCCACCT+TGG | 0.625994 | 6_1:+4712683 | None:intergenic |
| GCAATAGGTGCCACCAACAA+TGG | 0.628514 | 6_1:+4714628 | None:intergenic |
| TTAATCTCATTAGGCCAAGG+TGG | 0.638847 | 6_1:-4712697 | Msa0870330:CDS |
| TTGGTAGAGTAATTTCACAA+TGG | 0.651611 | 6_1:+4712314 | None:intergenic |
| CATAACATAGAGAAAAGATG+AGG | 0.677023 | 6_1:+4714570 | None:intergenic |
| AATCATAGCGATGATTATCG+CGG | 0.703876 | 6_1:-4711210 | Msa0870330:CDS |
| AGAGAGGTTTGCATTCAAAG+GGG | 0.708268 | 6_1:-4714752 | Msa0870330:CDS |
| CTGGTGGACAGAAAACCAAG+AGG | 0.752478 | 6_1:-4715434 | Msa0870330:CDS |
| ATACCAAGAAGAATGTACTG+TGG | 0.754580 | 6_1:+4711092 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTAATTTTTACATGTTTT+TGG | - | chr6_1:4711542-4711561 | Msa0870330:CDS | 10.0% |
| !! | TTATAAAAAGAAATAAGAAA+TGG | + | chr6_1:4712359-4712378 | None:intergenic | 10.0% |
| !! | AAATTACTATTTATAGTTTA+TGG | - | chr6_1:4714118-4714137 | Msa0870330:intron | 10.0% |
| !! | AATTACTATTTATAGTTTAT+GGG | - | chr6_1:4714119-4714138 | Msa0870330:intron | 10.0% |
| !! | ATACAAGAATAATAGAATAT+TGG | + | chr6_1:4711476-4711495 | None:intergenic | 15.0% |
| !! | TAGAATATCATAAATCAAAA+GGG | + | chr6_1:4711500-4711519 | None:intergenic | 15.0% |
| !! | ATAGAATATCATAAATCAAA+AGG | + | chr6_1:4711501-4711520 | None:intergenic | 15.0% |
| !! | CTATACTATAACAAAATTAA+TGG | + | chr6_1:4712303-4712322 | None:intergenic | 15.0% |
| !!! | TTTTTTAATCAAAATTTAGG+TGG | + | chr6_1:4712656-4712675 | None:intergenic | 15.0% |
| !!! | TGAAATTTTTATAATCATAG+AGG | + | chr6_1:4712947-4712966 | None:intergenic | 15.0% |
| !! | ATAACATAAAAAATAAGAAG+TGG | + | chr6_1:4712999-4713018 | None:intergenic | 15.0% |
| !! | GCTATATTAATATGATATAA+TGG | + | chr6_1:4715657-4715676 | None:intergenic | 15.0% |
| !!! | TTAAGGTACTATACAAATAT+TGG | + | chr6_1:4710742-4710761 | None:intergenic | 20.0% |
| !!! | ATCATGTTTTGGTTTTTTTA+AGG | + | chr6_1:4710759-4710778 | None:intergenic | 20.0% |
| !!! | ATTAATTTTGCTCAAGATTA+AGG | - | chr6_1:4711035-4711054 | Msa0870330:CDS | 20.0% |
| !!! | AAAGTTTTAAATCATGGTAA+TGG | + | chr6_1:4711427-4711446 | None:intergenic | 20.0% |
| !!! | TCTTCTAAAGTTTTAAATCA+TGG | + | chr6_1:4711433-4711452 | None:intergenic | 20.0% |
| !! | AATATGTAAATGCAAAAGAA+GGG | + | chr6_1:4711829-4711848 | None:intergenic | 20.0% |
| !! | AAATATGTAAATGCAAAAGA+AGG | + | chr6_1:4711830-4711849 | None:intergenic | 20.0% |
| !! | CTATAAAGTTAGATAATTGA+TGG | + | chr6_1:4711856-4711875 | None:intergenic | 20.0% |
| !! | TCTAACTTTATAGAGATATT+TGG | - | chr6_1:4711863-4711882 | Msa0870330:intron | 20.0% |
| !! | CTATAGTATTTGTATAAAGT+AGG | + | chr6_1:4712263-4712282 | None:intergenic | 20.0% |
| !! | AATACTATAGTATTACCATT+AGG | - | chr6_1:4712273-4712292 | Msa0870330:intron | 20.0% |
| !!! | AAAATTAATGGATTTCCTAA+TGG | + | chr6_1:4712291-4712310 | None:intergenic | 20.0% |
| !! | AATAAGAAATGGAATAATCT+TGG | + | chr6_1:4712348-4712367 | None:intergenic | 20.0% |
| !! | TACTATATAGTATTAGCATT+AGG | - | chr6_1:4712470-4712489 | Msa0870330:CDS | 20.0% |
| !!! | AATTGTTCATTGATTGATAA+GGG | + | chr6_1:4712592-4712611 | None:intergenic | 20.0% |
| !!! | AAATTGTTCATTGATTGATA+AGG | + | chr6_1:4712593-4712612 | None:intergenic | 20.0% |
| !! | AGTAGTGAAATAAAAAGTTA+TGG | + | chr6_1:4712724-4712743 | None:intergenic | 20.0% |
| !! | AACAGTATAGTTAATAGATA+AGG | - | chr6_1:4712913-4712932 | Msa0870330:intron | 20.0% |
| !!! | TATTATATCCTTTTAGCATA+TGG | + | chr6_1:4713033-4713052 | None:intergenic | 20.0% |
| !! | AATGACTTAGATGATTAAAA+AGG | + | chr6_1:4714168-4714187 | None:intergenic | 20.0% |
| !!! | ATTTATTTTTCTTGTGAAAC+AGG | - | chr6_1:4714733-4714752 | Msa0870330:CDS | 20.0% |
| !! | TTAATCATAACCTTTACATT+TGG | + | chr6_1:4714843-4714862 | None:intergenic | 20.0% |
| !!! | TAATTTTATCACAAAGTTTG+TGG | - | chr6_1:4715622-4715641 | Msa0870330:five_prime_UTR | 20.0% |
| !!! | TTTTGATTCTCTCTTAAGTT+TGG | - | chr6_1:4710804-4710823 | Msa0870330:CDS | 25.0% |
| ! | TTTAGTCAATTTCAAAGTGT+AGG | - | chr6_1:4710831-4710850 | Msa0870330:CDS | 25.0% |
| !!! | TTCATTTTTCTAGAAGCATT+TGG | - | chr6_1:4710870-4710889 | Msa0870330:CDS | 25.0% |
| ! | CATTTGGTATCTTCTTATAA+TGG | - | chr6_1:4710886-4710905 | Msa0870330:CDS | 25.0% |
| ! | TTTCAAGATTCAACCTTATT+AGG | - | chr6_1:4711011-4711030 | Msa0870330:CDS | 25.0% |
| ! | TTCAAGATTCAACCTTATTA+GGG | - | chr6_1:4711012-4711031 | Msa0870330:CDS | 25.0% |
| ! | AGCAAAATTAATCCCTAATA+AGG | + | chr6_1:4711027-4711046 | None:intergenic | 25.0% |
| ! | AGCAAATTACATATGATCAA+TGG | + | chr6_1:4711155-4711174 | None:intergenic | 25.0% |
| ! | GATTCAAATTCATTCAATTG+TGG | + | chr6_1:4711277-4711296 | None:intergenic | 25.0% |
| !! | TATTGGTTGAATTATGACTA+TGG | + | chr6_1:4711459-4711478 | None:intergenic | 25.0% |
| ! | TAGATAAGTTACCAAATTTG+AGG | + | chr6_1:4711620-4711639 | None:intergenic | 25.0% |
| ! | GAAGTATATATATTTGTGGA+AGG | + | chr6_1:4711807-4711826 | None:intergenic | 25.0% |
| !! | AAGGGAAGTATATATATTTG+TGG | + | chr6_1:4711811-4711830 | None:intergenic | 25.0% |
| ! | GAATAATCTTGGAATAATCA+TGG | + | chr6_1:4712337-4712356 | None:intergenic | 25.0% |
| ! | CATATATGCTTAAATATGAG+TGG | + | chr6_1:4712531-4712550 | None:intergenic | 25.0% |
| ! | ACTTATGTTTGGTATCAATT+TGG | + | chr6_1:4712860-4712879 | None:intergenic | 25.0% |
| !! | GTGTATGTTTTACTTATGTT+TGG | + | chr6_1:4712871-4712890 | None:intergenic | 25.0% |
| ! | TACATGTCTATATAATTGGT+TGG | + | chr6_1:4713087-4713106 | None:intergenic | 25.0% |
| ! | TGGTTACATGTCTATATAAT+TGG | + | chr6_1:4713091-4713110 | None:intergenic | 25.0% |
| ! | ATATATTCACCAAAACAAAC+AGG | - | chr6_1:4713132-4713151 | Msa0870330:intron | 25.0% |
| ! | GATAGCATTAAAACAAGTTA+TGG | - | chr6_1:4713365-4713384 | Msa0870330:intron | 25.0% |
| !! | TTTCTGAGAATGTATAGAAA+CGG | + | chr6_1:4713403-4713422 | None:intergenic | 25.0% |
| ! | CAGTAACTTTCTATTTGAAT+TGG | + | chr6_1:4713466-4713485 | None:intergenic | 25.0% |
| ! | GAAGAAAACACAAGAAAAAA+TGG | + | chr6_1:4713527-4713546 | None:intergenic | 25.0% |
| ! | TCTCTCTATTTAATCTCATT+AGG | - | chr6_1:4713637-4713656 | Msa0870330:intron | 25.0% |
| ! | AATTAGGTTAAACAATATGG+CGG | + | chr6_1:4714524-4714543 | None:intergenic | 25.0% |
| ! | CAGAATTAGGTTAAACAATA+TGG | + | chr6_1:4714527-4714546 | None:intergenic | 25.0% |
| !! | TGTTTAACCTAATTCTGAAA+AGG | - | chr6_1:4714530-4714549 | Msa0870330:intron | 25.0% |
| ! | AAGCATTAAGGTCATAAATA+AGG | - | chr6_1:4714791-4714810 | Msa0870330:intron | 25.0% |
| ! | ATAAAAACTCTGTCGTATAA+CGG | + | chr6_1:4715035-4715054 | None:intergenic | 25.0% |
| !! | TATATCTGATATTTTCACAG+TGG | - | chr6_1:4715271-4715290 | Msa0870330:intron | 25.0% |
| !!! | GGTATGCAAGAATTTTTTTA+CGG | - | chr6_1:4715296-4715315 | Msa0870330:intron | 25.0% |
| GTAACAGAGTTAGAACTATT+TGG | - | chr6_1:4710689-4710708 | Msa0870330:three_prime_UTR | 30.0% | |
| AAAACCAAAACATGATCATG+TGG | - | chr6_1:4710763-4710782 | Msa0870330:exon | 30.0% | |
| TCAATTTCAAAGTGTAGGTT+TGG | - | chr6_1:4710836-4710855 | Msa0870330:CDS | 30.0% | |
| TCACATAGAATTTACCTATG+AGG | + | chr6_1:4710955-4710974 | None:intergenic | 30.0% | |
| GTTGAATTATAGCATATGCT+TGG | - | chr6_1:4711067-4711086 | Msa0870330:CDS | 30.0% | |
| TATAGCATATGCTTGGAATT+TGG | - | chr6_1:4711074-4711093 | Msa0870330:CDS | 30.0% | |
| !!! | AGGAACTTTTTCATCACAAA+TGG | + | chr6_1:4711110-4711129 | None:intergenic | 30.0% |
| ACATATGATCAATGGAATTG+AGG | + | chr6_1:4711147-4711166 | None:intergenic | 30.0% | |
| ! | AATTTGCTTCTGAAAAGCAT+AGG | - | chr6_1:4711167-4711186 | Msa0870330:CDS | 30.0% |
| !! | TTAGTAGGACTTATTTTCCA+CGG | - | chr6_1:4711200-4711219 | Msa0870330:CDS | 30.0% |
| ATTCATTCAATTGTGGTATG+AGG | + | chr6_1:4711270-4711289 | None:intergenic | 30.0% | |
| CTACAGTTAAATTCAACTAC+AGG | + | chr6_1:4711327-4711346 | None:intergenic | 30.0% | |
| CTGTAGTTGAATTTAACTGT+AGG | - | chr6_1:4711325-4711344 | Msa0870330:CDS | 30.0% | |
| AGACTAATGCAAGTTCAATA+GGG | + | chr6_1:4711361-4711380 | None:intergenic | 30.0% | |
| AACTTATCTAACTGATGTTG+TGG | - | chr6_1:4711630-4711649 | Msa0870330:intron | 30.0% | |
| AGCAAAGATGGTTAATAGTT+GGG | - | chr6_1:4711672-4711691 | Msa0870330:intron | 30.0% | |
| CATAACATAGAGAAAAGATG+AGG | + | chr6_1:4711776-4711795 | None:intergenic | 30.0% | |
| ! | CTCATCTTTTCTCTATGTTA+TGG | - | chr6_1:4711774-4711793 | Msa0870330:intron | 30.0% |
| TCAAATATGTGTATGAGACA+TGG | + | chr6_1:4711991-4712010 | None:intergenic | 30.0% | |
| ATTAAGCACCATATGCTAAA+AGG | - | chr6_1:4713022-4713041 | Msa0870330:intron | 30.0% | |
| !! | ATGGTTTTACCTGTTTGTTT+TGG | + | chr6_1:4713144-4713163 | None:intergenic | 30.0% |
| !! | CGACTTAAATTCTAAAATCC+AGG | - | chr6_1:4713178-4713197 | Msa0870330:intron | 30.0% |
| TTATCATAAGCTAATCCTTG+AGG | - | chr6_1:4713333-4713352 | Msa0870330:intron | 30.0% | |
| TATCATAAGCTAATCCTTGA+GGG | - | chr6_1:4713334-4713353 | Msa0870330:intron | 30.0% | |
| GTTTCTATACATTCTCAGAA+AGG | - | chr6_1:4713402-4713421 | Msa0870330:intron | 30.0% | |
| ! | TTCTTGTGTTTTCTTCCTAT+AGG | - | chr6_1:4713531-4713550 | Msa0870330:intron | 30.0% |
| ! | TCTTGTGTTTTCTTCCTATA+GGG | - | chr6_1:4713532-4713551 | Msa0870330:intron | 30.0% |
| TATTTAATCTCATTAGGCCA+AGG | - | chr6_1:4713643-4713662 | Msa0870330:intron | 30.0% | |
| !!! | AAAAAGCACTTTTCTTCCAA+TGG | - | chr6_1:4713761-4713780 | Msa0870330:intron | 30.0% |
| ! | TCTATCTTGATTTTCTCTAG+TGG | - | chr6_1:4713898-4713917 | Msa0870330:intron | 30.0% |
| TTGGTAGAGTAATTTCACAA+TGG | + | chr6_1:4714032-4714051 | None:intergenic | 30.0% | |
| ! | ACATTTTCAGACTTGTCATT+TGG | + | chr6_1:4714051-4714070 | None:intergenic | 30.0% |
| GTACACGTAATGAAACTTAA+AGG | + | chr6_1:4714215-4714234 | None:intergenic | 30.0% | |
| CGTTAAGCATAATTCTGAAT+CGG | + | chr6_1:4714375-4714394 | None:intergenic | 30.0% | |
| AAAAAATGTGCAGAGAATAG+AGG | - | chr6_1:4714404-4714423 | Msa0870330:intron | 30.0% | |
| ! | ATCTTGTCCTTTTCAGAATT+AGG | + | chr6_1:4714540-4714559 | None:intergenic | 30.0% |
| ACACATATGAGATGAGAAAT+CGG | - | chr6_1:4714561-4714580 | Msa0870330:intron | 30.0% | |
| ATTCTCTTACCAAAAAACAC+AGG | + | chr6_1:4714642-4714661 | None:intergenic | 30.0% | |
| GTAAGAGAATGTGTGAAAAA+TGG | - | chr6_1:4714652-4714671 | Msa0870330:CDS | 30.0% | |
| TGATTAAGCTATTGCCTATA+TGG | - | chr6_1:4714856-4714875 | Msa0870330:intron | 30.0% | |
| ! | TGTTTTGTGAAAAATGTTGC+AGG | + | chr6_1:4714918-4714937 | None:intergenic | 30.0% |
| ! | GCAACATTTTTCACAAAACA+AGG | - | chr6_1:4714918-4714937 | Msa0870330:intron | 30.0% |
| ATGACAATGAAGAGAAACAT+AGG | - | chr6_1:4714942-4714961 | Msa0870330:intron | 30.0% | |
| TAACGGCATTAACAGTATTA+TGG | + | chr6_1:4715018-4715037 | None:intergenic | 30.0% | |
| ! | TAGTACCAATAAGCATTTTC+TGG | - | chr6_1:4715222-4715241 | Msa0870330:intron | 30.0% |
| AACAACCAGAAAATGCTTAT+TGG | + | chr6_1:4715230-4715249 | None:intergenic | 30.0% | |
| ! | GCATTGTATACAAGTGTTTT+CGG | - | chr6_1:4715353-4715372 | Msa0870330:intron | 30.0% |
| GAAGTATACACAAGTTCAAA+AGG | - | chr6_1:4715416-4715435 | Msa0870330:CDS | 30.0% | |
| ATATCATCAGAAAACCAACT+TGG | + | chr6_1:4715446-4715465 | None:intergenic | 30.0% | |
| !!! | AAGTTGGTTTTCTGATGATA+TGG | - | chr6_1:4715445-4715464 | Msa0870330:exon | 30.0% |
| CACGTTTGGATAATTACTAT+TGG | - | chr6_1:4715474-4715493 | Msa0870330:five_prime_UTR | 30.0% | |
| ! | GTTTCCACATGATCATGTTT+TGG | + | chr6_1:4710770-4710789 | None:intergenic | 35.0% |
| CAAAGTGTAGGTTTGGATAT+TGG | - | chr6_1:4710843-4710862 | Msa0870330:CDS | 35.0% | |
| TGGTATCTTCTTATAATGGC+TGG | - | chr6_1:4710890-4710909 | Msa0870330:CDS | 35.0% | |
| TATCTTCTTATAATGGCTGG+TGG | - | chr6_1:4710893-4710912 | Msa0870330:CDS | 35.0% | |
| AATTCATGCATTCTCCTCAT+AGG | - | chr6_1:4710938-4710957 | Msa0870330:CDS | 35.0% | |
| TTGAGGCTCATTTGTGTTTA+AGG | + | chr6_1:4711130-4711149 | None:intergenic | 35.0% | |
| !! | ATAGGAAGCTAGTCTTTAGT+AGG | - | chr6_1:4711185-4711204 | Msa0870330:CDS | 35.0% |
| AATTTAACTGTAGGCAATCC+TGG | - | chr6_1:4711334-4711353 | Msa0870330:CDS | 35.0% | |
| GAGACTAATGCAAGTTCAAT+AGG | + | chr6_1:4711362-4711381 | None:intergenic | 35.0% | |
| CTAGATATTGAGTAGAATCG+CGG | + | chr6_1:4711391-4711410 | None:intergenic | 35.0% | |
| ! | TGCAATTTTACAGTCATTGC+AGG | - | chr6_1:4711565-4711584 | Msa0870330:CDS | 35.0% |
| ATAGAGAGGTTTGCATTCAA+AGG | - | chr6_1:4711589-4711608 | Msa0870330:CDS | 35.0% | |
| TAGAGAGGTTTGCATTCAAA+GGG | - | chr6_1:4711590-4711609 | Msa0870330:CDS | 35.0% | |
| CAGCAAAGATGGTTAATAGT+TGG | - | chr6_1:4711671-4711690 | Msa0870330:intron | 35.0% | |
| AAGATGGTTAATAGTTGGGT+TGG | - | chr6_1:4711676-4711695 | Msa0870330:intron | 35.0% | |
| ACCTATTGCTGATGCTTATT+GGG | - | chr6_1:4711729-4711748 | Msa0870330:intron | 35.0% | |
| AAAAGATGAGGACATTATGG+TGG | + | chr6_1:4711764-4711783 | None:intergenic | 35.0% | |
| GAGAAAAGATGAGGACATTA+TGG | + | chr6_1:4711767-4711786 | None:intergenic | 35.0% | |
| AATATGTGTATGAGACATGG+TGG | + | chr6_1:4711988-4712007 | None:intergenic | 35.0% | |
| TCTGCAATGAATATTACACG+TGG | - | chr6_1:4712221-4712240 | Msa0870330:intron | 35.0% | |
| TCTGCAATGACTAATATACG+TGG | - | chr6_1:4712411-4712430 | Msa0870330:CDS | 35.0% | |
| !! | GGAGATCCATTAAGTTTTGT+TGG | - | chr6_1:4712491-4712510 | Msa0870330:CDS | 35.0% |
| CAGACTCCAACAAAACTTAA+TGG | + | chr6_1:4712500-4712519 | None:intergenic | 35.0% | |
| !! | CTACAGTTTTTGAAGAGTTC+AGG | - | chr6_1:4712564-4712583 | Msa0870330:CDS | 35.0% |
| GTGAAATGTAGAATCTGACT+TGG | + | chr6_1:4712625-4712644 | None:intergenic | 35.0% | |
| TGGTAACTTCATTCTACTCA+GGG | + | chr6_1:4713067-4713086 | None:intergenic | 35.0% | |
| ! | TTGGTAACTTCATTCTACTC+AGG | + | chr6_1:4713068-4713087 | None:intergenic | 35.0% |
| AGATCATGACATCAGAATCA+TGG | + | chr6_1:4713111-4713130 | None:intergenic | 35.0% | |
| !! | AGTCGTGATTTTGACAACAA+TGG | + | chr6_1:4713163-4713182 | None:intergenic | 35.0% |
| TGAATAAAGTCGCAAAATCC+TGG | + | chr6_1:4713199-4713218 | None:intergenic | 35.0% | |
| ! | ACTGGGATTTTGCCTATTTT+GGG | + | chr6_1:4713251-4713270 | None:intergenic | 35.0% |
| ! | TACTGGGATTTTGCCTATTT+TGG | + | chr6_1:4713252-4713271 | None:intergenic | 35.0% |
| ! | TTCACGATTTTGTGCGATTT+TGG | + | chr6_1:4713282-4713301 | None:intergenic | 35.0% |
| ! | TTCTTCCAATGGTGGTATTT+TGG | - | chr6_1:4713772-4713791 | Msa0870330:intron | 35.0% |
| AAACACCAAAATACCACCAT+TGG | + | chr6_1:4713780-4713799 | None:intergenic | 35.0% | |
| ACATGAATGTTACACCCATT+AGG | + | chr6_1:4713813-4713832 | None:intergenic | 35.0% | |
| TCTTACATCCAAGACACATT+TGG | - | chr6_1:4713832-4713851 | Msa0870330:intron | 35.0% | |
| ACACATTTGGTTGGGTAATA+GGG | - | chr6_1:4713845-4713864 | Msa0870330:intron | 35.0% | |
| CTCTTAAACATGTTCGTGAA+AGG | + | chr6_1:4713982-4714001 | None:intergenic | 35.0% | |
| TATCTGTTATGTTACTGACG+TGG | - | chr6_1:4714279-4714298 | Msa0870330:intron | 35.0% | |
| ACAAGAGATACACATGAGAT+GGG | + | chr6_1:4714352-4714371 | None:intergenic | 35.0% | |
| !!! | GTAACAAGACCTGTGTTTTT+TGG | - | chr6_1:4714630-4714649 | Msa0870330:CDS | 35.0% |
| GTCATTGTAAGTCTCATAAC+GGG | + | chr6_1:4714687-4714706 | None:intergenic | 35.0% | |
| GGTCATTGTAAGTCTCATAA+CGG | + | chr6_1:4714688-4714707 | None:intergenic | 35.0% | |
| TTCTGTAAGCACTTCACTAT+AGG | + | chr6_1:4714709-4714728 | None:intergenic | 35.0% | |
| !! | CGAAAACTGTGAAAGCATTA+AGG | - | chr6_1:4714779-4714798 | Msa0870330:intron | 35.0% |
| !! | ATGAGAAGCATTGTCCATAT+AGG | + | chr6_1:4714873-4714892 | None:intergenic | 35.0% |
| TGAAAAATGTTGCAGGTTGT+TGG | + | chr6_1:4714911-4714930 | None:intergenic | 35.0% | |
| TTCAAATTTCAAGATCCCAC+CGG | - | chr6_1:4714965-4714984 | Msa0870330:intron | 35.0% | |
| TGGACAATGTTATAGCACTT+TGG | + | chr6_1:4714998-4715017 | None:intergenic | 35.0% | |
| AAGGTATAAACGTGATGCAA+AGG | - | chr6_1:4715087-4715106 | Msa0870330:intron | 35.0% | |
| TATAAACGTGATGCAAAGGA+TGG | - | chr6_1:4715091-4715110 | Msa0870330:intron | 35.0% | |
| ATAAACGTGATGCAAAGGAT+GGG | - | chr6_1:4715092-4715111 | Msa0870330:intron | 35.0% | |
| AATCATAGCGATGATTATCG+CGG | - | chr6_1:4715133-4715152 | Msa0870330:intron | 35.0% | |
| TTACCACAGTACATTCTTCT+TGG | - | chr6_1:4715248-4715267 | Msa0870330:intron | 35.0% | |
| ATACCAAGAAGAATGTACTG+TGG | + | chr6_1:4715254-4715273 | None:intergenic | 35.0% | |
| ! | TCTGATATTTTCACAGTGGT+TGG | - | chr6_1:4715275-4715294 | Msa0870330:intron | 35.0% |
| TCCGAAGAATATGAGAACAA+TGG | - | chr6_1:4715325-4715344 | Msa0870330:intron | 35.0% | |
| CCCATTGTTCTCATATTCTT+CGG | + | chr6_1:4715329-4715348 | None:intergenic | 35.0% | |
| CCGAAGAATATGAGAACAAT+GGG | - | chr6_1:4715326-4715345 | Msa0870330:intron | 35.0% | |
| ! | TATACAAGTGTTTTCGGAGT+TGG | - | chr6_1:4715359-4715378 | Msa0870330:intron | 35.0% |
| !! | ATTACTATTGGCTTCTAGCT+TGG | - | chr6_1:4715486-4715505 | Msa0870330:five_prime_UTR | 35.0% |
| AGAGAGGTTTGCATTCAAAG+GGG | - | chr6_1:4711591-4711610 | Msa0870330:CDS | 40.0% | |
| CACTTCCATAATGCCATTGT+TGG | - | chr6_1:4711702-4711721 | Msa0870330:intron | 40.0% | |
| TTCCATAATGCCATTGTTGG+TGG | - | chr6_1:4711705-4711724 | Msa0870330:intron | 40.0% | |
| CACCTATTGCTGATGCTTAT+TGG | - | chr6_1:4711728-4711747 | Msa0870330:intron | 40.0% | |
| CATCTTACAACCGTCTTTGA+CGG | - | chr6_1:4711921-4711940 | Msa0870330:intron | 40.0% | |
| GAGTTCAAATCCGTCAAAGA+CGG | + | chr6_1:4711934-4711953 | None:intergenic | 40.0% | |
| CAATGACTAATATACGTGGC+TGG | - | chr6_1:4712415-4712434 | Msa0870330:CDS | 40.0% | |
| CTATGGATTTGAGTCGTTGA+AGG | + | chr6_1:4713222-4713241 | None:intergenic | 40.0% | |
| !!! | CCTATTTTGGGATTCTGCTA+TGG | + | chr6_1:4713239-4713258 | None:intergenic | 40.0% |
| CCATAGCAGAATCCCAAAAT+AGG | - | chr6_1:4713236-4713255 | Msa0870330:intron | 40.0% | |
| !! | CGATTTTGGTGCGATTTACT+GGG | + | chr6_1:4713268-4713287 | None:intergenic | 40.0% |
| TTAATCTCATTAGGCCAAGG+TGG | - | chr6_1:4713646-4713665 | Msa0870330:intron | 40.0% | |
| !! | GAGATGGATTATATCCACCT+TGG | + | chr6_1:4713663-4713682 | None:intergenic | 40.0% |
| AATCCATCTCTACAAGCCTT+TGG | - | chr6_1:4713673-4713692 | Msa0870330:intron | 40.0% | |
| ! | GTGTCATCTGTGTTACTACA+AGG | + | chr6_1:4713730-4713749 | None:intergenic | 40.0% |
| ! | AAGCACTTTTCTTCCAATGG+TGG | - | chr6_1:4713764-4713783 | Msa0870330:intron | 40.0% |
| !!! | TGGTATTTTGGTGTTTGTGC+TGG | - | chr6_1:4713784-4713803 | Msa0870330:intron | 40.0% |
| ACATCCAAGACACATTTGGT+TGG | - | chr6_1:4713836-4713855 | Msa0870330:intron | 40.0% | |
| CATCCAAGACACATTTGGTT+GGG | - | chr6_1:4713837-4713856 | Msa0870330:intron | 40.0% | |
| TTACCCAACCAAATGTGTCT+TGG | + | chr6_1:4713843-4713862 | None:intergenic | 40.0% | |
| GACACATTTGGTTGGGTAAT+AGG | - | chr6_1:4713844-4713863 | Msa0870330:intron | 40.0% | |
| GATGGGAAATGGATACTCAT+CGG | + | chr6_1:4714335-4714354 | None:intergenic | 40.0% | |
| GATACACATGAGATGGGAAA+TGG | + | chr6_1:4714346-4714365 | None:intergenic | 40.0% | |
| GACAAGAGATACACATGAGA+TGG | + | chr6_1:4714353-4714372 | None:intergenic | 40.0% | |
| GATGAGAAATCGGTATGCAT+AGG | - | chr6_1:4714571-4714590 | Msa0870330:CDS | 40.0% | |
| CATAGGATAAGTCACCAACT+CGG | - | chr6_1:4714588-4714607 | Msa0870330:CDS | 40.0% | |
| GTGTCTGCTACCAAATGTAA+AGG | - | chr6_1:4714830-4714849 | Msa0870330:intron | 40.0% | |
| !! | TGTTATAGCACTTTGGAGTG+TGG | + | chr6_1:4714991-4715010 | None:intergenic | 40.0% |
| CTGATAACACGACAGGAAAA+AGG | - | chr6_1:4715068-4715087 | Msa0870330:intron | 40.0% | |
| GTTCAAAAGGAACTCCAAGT+TGG | - | chr6_1:4715429-4715448 | Msa0870330:CDS | 40.0% | |
| ! | GTTTTCTGATGATATGGTCG+AGG | - | chr6_1:4715451-4715470 | Msa0870330:exon | 40.0% |
| ! | ATTTTCCACGGCCGTAATCT+CGG | - | chr6_1:4711212-4711231 | Msa0870330:CDS | 45.0% |
| TAATGTCGCAGCCGAGATTA+CGG | + | chr6_1:4711226-4711245 | None:intergenic | 45.0% | |
| TAATCTCGGCTGCGACATTA+TGG | - | chr6_1:4711226-4711245 | Msa0870330:CDS | 45.0% | |
| ATGCAAGTTCAATAGGGACC+AGG | + | chr6_1:4711355-4711374 | None:intergenic | 45.0% | |
| CAGTCATTGCAGGTATAGAG+AGG | - | chr6_1:4711575-4711594 | Msa0870330:CDS | 45.0% | |
| CAAAGGGGTAGCCTCAAATT+TGG | - | chr6_1:4711606-4711625 | Msa0870330:intron | 45.0% | |
| CAACTCATCTGCAGCAAAGA+TGG | - | chr6_1:4711660-4711679 | Msa0870330:intron | 45.0% | |
| TGCCACCAACAATGGCATTA+TGG | + | chr6_1:4711710-4711729 | None:intergenic | 45.0% | |
| GCCCAATAAGCATCAGCAAT+AGG | + | chr6_1:4711733-4711752 | None:intergenic | 45.0% | |
| !! | GCGATTTTGGTGCGATTTAC+TGG | + | chr6_1:4713269-4713288 | None:intergenic | 45.0% |
| GCTATCTTCATAAGCCCTCA+AGG | + | chr6_1:4713351-4713370 | None:intergenic | 45.0% | |
| TCAATGCTGCAAGTCCCTAT+AGG | + | chr6_1:4713549-4713568 | None:intergenic | 45.0% | |
| CAACAGCACTAGCAAGATCA+TGG | - | chr6_1:4713572-4713591 | Msa0870330:intron | 45.0% | |
| !! | ACCAAGTTGATCAGCTCCAA+AGG | + | chr6_1:4713692-4713711 | None:intergenic | 45.0% |
| TGTTTGTGCTGGAAGCCTAA+TGG | - | chr6_1:4713795-4713814 | Msa0870330:intron | 45.0% | |
| GTTTGTGCTGGAAGCCTAAT+GGG | - | chr6_1:4713796-4713815 | Msa0870330:intron | 45.0% | |
| !! | GAAAGAAGCATCGAAATCGC+AGG | + | chr6_1:4713880-4713899 | None:intergenic | 45.0% |
| GTTATGTTACTGACGTGGCA+TGG | - | chr6_1:4714284-4714303 | Msa0870330:intron | 45.0% | |
| TGCAGAGAATAGAGGAATCG+AGG | - | chr6_1:4714412-4714431 | Msa0870330:intron | 45.0% | |
| GCAGAGAATAGAGGAATCGA+GGG | - | chr6_1:4714413-4714432 | Msa0870330:intron | 45.0% | |
| CCAACGTACGAAAATCTCAG+AGG | + | chr6_1:4714445-4714464 | None:intergenic | 45.0% | |
| !!! | CCTCTGAGATTTTCGTACGT+TGG | - | chr6_1:4714442-4714461 | Msa0870330:intron | 45.0% |
| GTTGGATGACGATTACCTCT+AGG | - | chr6_1:4714460-4714479 | Msa0870330:intron | 45.0% | |
| GAATATGCTGTGTAGCCTAG+AGG | + | chr6_1:4714478-4714497 | None:intergenic | 45.0% | |
| TGACGTGATAGTAACCGAGT+TGG | + | chr6_1:4714605-4714624 | None:intergenic | 45.0% | |
| ! | TCACAGTTTTCGCGACAAAG+TGG | + | chr6_1:4714771-4714790 | None:intergenic | 45.0% |
| GTGATGCAAAGGATGGGAAT+CGG | - | chr6_1:4715098-4715117 | Msa0870330:intron | 45.0% | |
| ACTTCTCATTTGTCGACCGA+TGG | + | chr6_1:4715183-4715202 | None:intergenic | 45.0% | |
| GGTCGACAAATGAGAAGTGA+AGG | - | chr6_1:4715185-4715204 | Msa0870330:intron | 45.0% | |
| !!! | TTATTTTTTAATCAAAATTT+AGG | + | chr6_1:4712659-4712678 | None:intergenic | 5.0% |
| !!! | TAAAATTTTTTGATTTTTTA+TGG | + | chr6_1:4713307-4713326 | None:intergenic | 5.0% |
| ! | CTGGTGGACAGAAAACCAAG+AGG | - | chr6_1:4710909-4710928 | Msa0870330:CDS | 50.0% |
| GCATGAATTGCTGAGCCTCT+TGG | + | chr6_1:4710927-4710946 | None:intergenic | 50.0% | |
| ! | GCAATAGGTGCCACCAACAA+TGG | + | chr6_1:4711718-4711737 | None:intergenic | 50.0% |
| CAGTAGCACAGATTCAGACG+CGG | + | chr6_1:4712785-4712804 | None:intergenic | 50.0% | |
| ATGAAGCACAGACTCAGACG+CGG | + | chr6_1:4712821-4712840 | None:intergenic | 50.0% | |
| GCTCCAAAGGCTTGTAGAGA+TGG | + | chr6_1:4713679-4713698 | None:intergenic | 50.0% | |
| !! | GCCTTTGGAGCTGATCAACT+TGG | - | chr6_1:4713688-4713707 | Msa0870330:intron | 50.0% |
| TTACTGACGTGGCATGGACA+TGG | - | chr6_1:4714290-4714309 | Msa0870330:intron | 50.0% | |
| TACTGACGTGGCATGGACAT+GGG | - | chr6_1:4714291-4714310 | Msa0870330:intron | 50.0% | |
| AACAGTGAGCGAGAGAGAAG+AGG | + | chr6_1:4714500-4714519 | None:intergenic | 50.0% | |
| !! | ATAGCACTTTGGAGTGTGGC+CGG | + | chr6_1:4714987-4715006 | None:intergenic | 50.0% |
| CGTGTTATCAGCTGAGCGAA+CGG | + | chr6_1:4715059-4715078 | None:intergenic | 50.0% | |
| GCAAAGGATGGGAATCGGAA+TGG | - | chr6_1:4715103-4715122 | Msa0870330:intron | 50.0% | |
| TCATTTGTCGACCGATGGCA+AGG | + | chr6_1:4715178-4715197 | None:intergenic | 50.0% | |
| TGATATGGTCGAGGCACGTT+TGG | - | chr6_1:4715460-4715479 | Msa0870330:exon | 50.0% | |
| CGCTCAGCTGATAACACGAC+AGG | - | chr6_1:4715061-4715080 | Msa0870330:intron | 55.0% | |
| !! | CACTTTGGAGTGTGGCCGGT+GGG | + | chr6_1:4714983-4715002 | None:intergenic | 60.0% |
| !! | GCACTTTGGAGTGTGGCCGG+TGG | + | chr6_1:4714984-4715003 | None:intergenic | 65.0% |
| CGCAGCCGAGATTACGGCCG+TGG | + | chr6_1:4711220-4711239 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 4710672 | 4715693 | 4710672 | ID=Msa0870330;Name=Msa0870330 |
| chr6_1 | mRNA | 4710672 | 4715693 | 4710672 | ID=Msa0870330-mRNA-1;Parent=Msa0870330;Name=Msa0870330-mRNA-1;_AED=0.07;_eAED=0.07;_QI=201|1|1|1|0.75|0.6|5|110|542 |
| chr6_1 | exon | 4710672 | 4711610 | 4710672 | ID=Msa0870330-mRNA-1:exon:1501;Parent=Msa0870330-mRNA-1 |
| chr6_1 | exon | 4712286 | 4712812 | 4712286 | ID=Msa0870330-mRNA-1:exon:1500;Parent=Msa0870330-mRNA-1 |
| chr6_1 | exon | 4714570 | 4714787 | 4714570 | ID=Msa0870330-mRNA-1:exon:1499;Parent=Msa0870330-mRNA-1 |
| chr6_1 | exon | 4715406 | 4715512 | 4715406 | ID=Msa0870330-mRNA-1:exon:1498;Parent=Msa0870330-mRNA-1 |
| chr6_1 | exon | 4715545 | 4715693 | 4715545 | ID=Msa0870330-mRNA-1:exon:1497;Parent=Msa0870330-mRNA-1 |
| chr6_1 | five_prime_UTR | 4715545 | 4715693 | 4715545 | ID=Msa0870330-mRNA-1:five_prime_utr;Parent=Msa0870330-mRNA-1 |
| chr6_1 | five_prime_UTR | 4715461 | 4715512 | 4715461 | ID=Msa0870330-mRNA-1:five_prime_utr;Parent=Msa0870330-mRNA-1 |
| chr6_1 | CDS | 4715406 | 4715460 | 4715406 | ID=Msa0870330-mRNA-1:cds;Parent=Msa0870330-mRNA-1 |
| chr6_1 | CDS | 4714570 | 4714787 | 4714570 | ID=Msa0870330-mRNA-1:cds;Parent=Msa0870330-mRNA-1 |
| chr6_1 | CDS | 4712286 | 4712812 | 4712286 | ID=Msa0870330-mRNA-1:cds;Parent=Msa0870330-mRNA-1 |
| chr6_1 | CDS | 4710782 | 4711610 | 4710782 | ID=Msa0870330-mRNA-1:cds;Parent=Msa0870330-mRNA-1 |
| chr6_1 | three_prime_UTR | 4710672 | 4710781 | 4710672 | ID=Msa0870330-mRNA-1:three_prime_utr;Parent=Msa0870330-mRNA-1 |
| Gene Sequence |
| Protein sequence |
