Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0974250 | XP_013450947.1 | 97.133 | 279 | 8 | 0 | 1 | 279 | 1 | 279 | 0.0 | 565 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0974250 | sp|Q8LGJ5|PCO2_ARATH | 58.741 | 286 | 100 | 5 | 1 | 278 | 1 | 276 | 2.52e-115 | 335 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0974250 | A0A072U5P5 | 97.133 | 279 | 8 | 0 | 1 | 279 | 1 | 279 | 0.0 | 565 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0694170 | Msa0974250 | -0.801832 | 7.476111e-49 | -8.615850e-47 |
| Msa0708840 | Msa0974250 | -0.800034 | 1.741924e-48 | -8.615850e-47 |
| Msa0294200 | Msa0974250 | 0.801275 | 9.722665e-49 | -8.615850e-47 |
| Msa0871620 | Msa0974250 | 0.945515 | 2.644856e-104 | -8.615850e-47 |
| Msa0904940 | Msa0974250 | 0.890619 | 8.363963e-74 | -8.615850e-47 |
| Msa0936950 | Msa0974250 | 0.921199 | 4.858717e-88 | -8.615850e-47 |
| Msa0974250 | Msa1182530 | -0.813274 | 2.781398e-51 | -8.615850e-47 |
| Msa0974250 | Msa1450710 | 0.807544 | 4.800143e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0974250 | MtrunA17_Chr6g0452941 | 97.133 | 279 | 8 | 0 | 1 | 279 | 1 | 279 | 0.0 | 565 |
| Msa0974250 | MtrunA17_Chr7g0216881 | 68.198 | 283 | 81 | 3 | 1 | 279 | 1 | 278 | 3.17e-136 | 385 |
| Msa0974250 | MtrunA17_Chr6g0460971 | 50.000 | 240 | 113 | 4 | 41 | 279 | 58 | 291 | 6.60e-78 | 238 |
| Msa0974250 | MtrunA17_Chr7g0253891 | 48.473 | 262 | 124 | 7 | 20 | 276 | 23 | 278 | 4.89e-77 | 235 |
| Msa0974250 | MtrunA17_Chr2g0307681 | 44.656 | 262 | 123 | 7 | 29 | 276 | 16 | 269 | 5.16e-66 | 207 |
| Msa0974250 | MtrunA17_Chr2g0320221 | 41.767 | 249 | 115 | 7 | 41 | 276 | 5 | 236 | 1.93e-62 | 197 |
| Msa0974250 | MtrunA17_Chr4g0041281 | 42.400 | 250 | 113 | 8 | 41 | 276 | 5 | 237 | 3.67e-61 | 193 |
| Msa0974250 | MtrunA17_Chr2g0283961 | 39.608 | 255 | 123 | 9 | 38 | 276 | 1 | 240 | 3.42e-57 | 183 |
| Msa0974250 | MtrunA17_Chr5g0426531 | 39.370 | 254 | 117 | 5 | 37 | 277 | 2 | 231 | 7.47e-50 | 165 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0974250 | AT5G39890.1 | 58.741 | 286 | 100 | 5 | 1 | 278 | 1 | 276 | 2.56e-116 | 335 |
| Msa0974250 | AT5G39890.2 | 60.494 | 243 | 81 | 4 | 1 | 237 | 1 | 234 | 1.66e-100 | 294 |
| Msa0974250 | AT5G15120.1 | 58.848 | 243 | 84 | 4 | 41 | 276 | 58 | 291 | 6.23e-99 | 292 |
| Msa0974250 | AT1G18490.1 | 43.165 | 278 | 130 | 9 | 20 | 276 | 10 | 280 | 9.26e-64 | 202 |
| Msa0974250 | AT2G42670.1 | 43.089 | 246 | 119 | 6 | 41 | 276 | 5 | 239 | 3.00e-63 | 199 |
| Msa0974250 | AT2G42670.2 | 43.725 | 247 | 117 | 7 | 41 | 276 | 5 | 240 | 8.94e-63 | 198 |
| Msa0974250 | AT3G58670.2 | 41.870 | 246 | 123 | 5 | 41 | 276 | 5 | 240 | 5.68e-61 | 193 |
| Msa0974250 | AT3G58670.3 | 41.870 | 246 | 123 | 5 | 41 | 276 | 5 | 240 | 5.68e-61 | 193 |
| Msa0974250 | AT3G58670.1 | 41.870 | 246 | 123 | 5 | 41 | 276 | 5 | 240 | 5.68e-61 | 193 |
| Msa0974250 | AT3G58670.4 | 44.086 | 186 | 98 | 2 | 91 | 276 | 18 | 197 | 1.11e-51 | 168 |
| Msa0974250 | AT2G42670.3 | 46.061 | 165 | 81 | 3 | 113 | 276 | 15 | 172 | 3.62e-44 | 148 |
Find 80 sgRNAs with CRISPR-Local
Find 271 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCCTAATATGCCATATTTC+AGG | 0.174666 | 6_4:+7158039 | Msa0974250:CDS |
| TAAACATTCCTTTCCTCTTC+TGG | 0.218650 | 6_4:-7159935 | None:intergenic |
| CTTTATGGAACAACAGAAAA+AGG | 0.241409 | 6_4:+7160221 | Msa0974250:three_prime_UTR |
| TTGAAAATGGTAGGAGATTC+AGG | 0.242628 | 6_4:-7158614 | None:intergenic |
| TGTGCAGTTCTTGATGTTCT+TGG | 0.289175 | 6_4:+7159222 | Msa0974250:CDS |
| GGATCCAAGTCAACATCTTC+TGG | 0.300517 | 6_4:-7158020 | None:intergenic |
| ATAACAAACTTCTATATTGA+TGG | 0.307799 | 6_4:-7160282 | None:intergenic |
| TCCTCAGGATATAAGATAGA+AGG | 0.318843 | 6_4:-7159162 | None:intergenic |
| ACTTTCTGAGGGTTTGAAAA+TGG | 0.319904 | 6_4:-7158627 | None:intergenic |
| GCCCTGAAATATGGCATATT+AGG | 0.323972 | 6_4:-7158041 | None:intergenic |
| CTGTTAGTAATTGTTTCCTT+TGG | 0.343483 | 6_4:-7156242 | None:intergenic |
| TGCACATCAAATCATATGAT+TGG | 0.370445 | 6_4:+7158576 | Msa0974250:CDS |
| TGCTAACTCTCCACAATAGT+TGG | 0.397487 | 6_4:-7160022 | None:intergenic |
| GATGCATTAGCCCTGAAATA+TGG | 0.408982 | 6_4:-7158050 | None:intergenic |
| CCTCCATATTCTGATCTTGA+TGG | 0.415771 | 6_4:+7159246 | Msa0974250:CDS |
| ATTCCTTTCCTCTTCTGGTA+TGG | 0.419126 | 6_4:-7159930 | None:intergenic |
| GTTGAGAGAGAGAAAACAGT+TGG | 0.431199 | 6_4:-7155551 | None:intergenic |
| GTCTTTGCTTCTAGTGGGAC+AGG | 0.438771 | 6_4:+7156338 | Msa0974250:CDS |
| TCTGTTGTTCCATAAAGAAA+AGG | 0.448879 | 6_4:-7160215 | None:intergenic |
| CTGCCATCAAGATCAGAATA+TGG | 0.460746 | 6_4:-7159249 | None:intergenic |
| TTATGAGTGTGAGAAATTCT+CGG | 0.469187 | 6_4:+7158106 | Msa0974250:CDS |
| TTACCTGGAAAGTTGGAAAA+CGG | 0.476609 | 6_4:-7159297 | None:intergenic |
| GCACATCAAATCATATGATT+GGG | 0.481019 | 6_4:+7158577 | Msa0974250:CDS |
| GGAAGAAGTAGCAAAGAAGA+AGG | 0.482084 | 6_4:-7155579 | None:intergenic |
| GTGAAGGTTGGTGAAGATTG+AGG | 0.482525 | 6_4:-7155623 | None:intergenic |
| AGAACCTTAGCTGATAGAAA+AGG | 0.486526 | 6_4:+7156200 | Msa0974250:CDS |
| ATTGACATTTGATATAAAAG+AGG | 0.492060 | 6_4:-7155600 | None:intergenic |
| TTATGAATGGCTACAAGAAA+AGG | 0.495196 | 6_4:+7159955 | Msa0974250:CDS |
| GAAGAAGTAGCAAAGAAGAA+GGG | 0.495863 | 6_4:-7155578 | None:intergenic |
| TCCTAATATGCCATATTTCA+GGG | 0.497378 | 6_4:+7158040 | Msa0974250:CDS |
| AAGGAAGTCTTTGCTTCTAG+TGG | 0.500710 | 6_4:+7156332 | Msa0974250:CDS |
| CAAAGAGAAGTCAGAAAACC+AGG | 0.501782 | 6_4:-7155522 | None:intergenic |
| AGGAAAGGAATGTTTATGAA+TGG | 0.504362 | 6_4:+7159942 | Msa0974250:CDS |
| TGCAAGTTGCCACCATCCTC+AGG | 0.504973 | 6_4:-7159177 | None:intergenic |
| GAAAGAGAAATAGTGAAGGT+TGG | 0.505968 | 6_4:-7155635 | None:intergenic |
| AGGAATTGTCCCACCAGCTC+AGG | 0.513462 | 6_4:+7156358 | Msa0974250:CDS |
| GAATATCAAAACTTAGCCCC+TGG | 0.518117 | 6_4:+7155504 | None:intergenic |
| CTTGAAGATTTAAAAGTGGA+AGG | 0.530635 | 6_4:+7159983 | Msa0974250:CDS |
| ACAGCAGGTCAAGGAGGAGC+CGG | 0.531515 | 6_4:+7156261 | Msa0974250:CDS |
| AACTTATCAATGTCCTGAGC+TGG | 0.532617 | 6_4:-7156371 | None:intergenic |
| TAAGTACTACTCACTTTCTG+AGG | 0.535516 | 6_4:-7158639 | None:intergenic |
| GCATCTTCTTCTGACGCCGC+CGG | 0.535728 | 6_4:-7156280 | None:intergenic |
| TCTATCTTATATCCTGAGGA+TGG | 0.553467 | 6_4:+7159165 | Msa0974250:CDS |
| ATGTTGCAGGTCCTGAGTTG+AGG | 0.553715 | 6_4:+7159094 | Msa0974250:intron |
| TCTGAGGGTTTGAAAATGGT+AGG | 0.554115 | 6_4:-7158623 | None:intergenic |
| AAGAAGTAGCAAAGAAGAAG+GGG | 0.554384 | 6_4:-7155577 | None:intergenic |
| CCAACTTGAAGATTTAAAAG+TGG | 0.556946 | 6_4:+7159979 | Msa0974250:CDS |
| TTATCAATGTCCTGAGCTGG+TGG | 0.560783 | 6_4:-7156368 | None:intergenic |
| GTACAGTGGTCCAACTATTG+TGG | 0.561786 | 6_4:+7160012 | Msa0974250:CDS |
| AGGAAGTCTTTGCTTCTAGT+GGG | 0.564984 | 6_4:+7156333 | Msa0974250:CDS |
| AGGAAACAATTACTAACAGC+AGG | 0.568362 | 6_4:+7156246 | Msa0974250:CDS |
| CCTCAGGATATAAGATAGAA+GGG | 0.572370 | 6_4:-7159161 | None:intergenic |
| AAAACCAGAAGATGTTGACT+TGG | 0.573524 | 6_4:+7158016 | Msa0974250:CDS |
| AAGTACTACTCACTTTCTGA+GGG | 0.577095 | 6_4:-7158638 | None:intergenic |
| TATAAGATAGAAGGGTTGCA+AGG | 0.578009 | 6_4:-7159153 | None:intergenic |
| CTCAGGACATTGATAAGTTG+CGG | 0.580370 | 6_4:+7156375 | Msa0974250:CDS |
| GGGCTAATGCATCTCACAGA+AGG | 0.585075 | 6_4:+7158060 | Msa0974250:CDS |
| CCCTTCTATCTTATATCCTG+AGG | 0.585726 | 6_4:+7159161 | Msa0974250:CDS |
| AGGACTATCCATACCAGAAG+AGG | 0.597067 | 6_4:+7159922 | Msa0974250:CDS |
| GGTTGCACAAGTTGTTGTTG+AGG | 0.600572 | 6_4:-7155702 | None:intergenic |
| TATCCATACCAGAAGAGGAA+AGG | 0.605568 | 6_4:+7159927 | Msa0974250:CDS |
| CATCAAATCATATGATTGGG+TGG | 0.621774 | 6_4:+7158580 | Msa0974250:CDS |
| TGTAGAGGAATAACACCAGA+AGG | 0.622496 | 6_4:-7158506 | None:intergenic |
| ATCTTATATCCTGAGGATGG+TGG | 0.627492 | 6_4:+7159168 | Msa0974250:CDS |
| GTTGAGGTTAGCAAAAGTGA+AGG | 0.633387 | 6_4:+7159110 | Msa0974250:CDS |
| CAATTACTAACAGCAGGTCA+AGG | 0.634321 | 6_4:+7156252 | Msa0974250:CDS |
| GCAGGTCAAGGAGGAGCCGG+CGG | 0.636609 | 6_4:+7156264 | Msa0974250:CDS |
| GCGTCAGAAGAAGATGCCGC+CGG | 0.640523 | 6_4:+7156286 | Msa0974250:CDS |
| TTTGGAAAGAGAAATAGTGA+AGG | 0.642083 | 6_4:-7155639 | None:intergenic |
| ATTCCAGGGTGATTATGTAG+AGG | 0.643712 | 6_4:-7158521 | None:intergenic |
| TTGATGGCTAAAATTAAACA+TGG | 0.676097 | 6_4:-7160266 | None:intergenic |
| AAAGAGAAGTCAGAAAACCA+GGG | 0.676901 | 6_4:-7155521 | None:intergenic |
| TATCAATGTCCTGAGCTGGT+GGG | 0.678123 | 6_4:-7156367 | None:intergenic |
| CCATCAAGATCAGAATATGG+AGG | 0.684165 | 6_4:-7159246 | None:intergenic |
| ATTCCTCTACATAATCACCC+TGG | 0.691462 | 6_4:+7158518 | Msa0974250:CDS |
| AAGAGAAGTCAGAAAACCAG+GGG | 0.695114 | 6_4:-7155520 | None:intergenic |
| AGAGGAATAACACCAGAAGG+TGG | 0.695453 | 6_4:-7158503 | None:intergenic |
| TTACTAACAGCAGGTCAAGG+AGG | 0.728299 | 6_4:+7156255 | Msa0974250:CDS |
| GTGGAAGGAAGAATGTACAG+TGG | 0.741291 | 6_4:+7159998 | Msa0974250:CDS |
| AAAATGGTAGGAGATTCAGG+AGG | 0.774453 | 6_4:-7158611 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATATAAATAATAAGAATG+AGG | - | chr6_4:7155779-7155798 | None:intergenic | 10.0% |
| !!! | TCTGTTTTTTAAATTTTTAT+GGG | + | chr6_4:7156047-7156066 | Msa0974250:intron | 10.0% |
| !!! | TTTTATTTTCTCAATTATTT+TGG | + | chr6_4:7156596-7156615 | Msa0974250:intron | 10.0% |
| !! | TTCAATGTAAAATATATATT+GGG | - | chr6_4:7157285-7157304 | None:intergenic | 10.0% |
| !! | TTTCAATGTAAAATATATAT+TGG | - | chr6_4:7157286-7157305 | None:intergenic | 10.0% |
| !! | ATGAAAAATGTTGTAAAATT+TGG | - | chr6_4:7155660-7155679 | None:intergenic | 15.0% |
| !!! | TTTTGTTTACATTGTTTTTT+TGG | - | chr6_4:7155747-7155766 | None:intergenic | 15.0% |
| !!! | TTCAAATTTGAATTGTTTTT+TGG | + | chr6_4:7155927-7155946 | Msa0974250:intron | 15.0% |
| !! | AAACTAAATTTCATCTAAAA+GGG | - | chr6_4:7155956-7155975 | None:intergenic | 15.0% |
| !! | TAAACTAAATTTCATCTAAA+AGG | - | chr6_4:7155957-7155976 | None:intergenic | 15.0% |
| !! | CATAAAAATTTAAAAAACAG+AGG | - | chr6_4:7156048-7156067 | None:intergenic | 15.0% |
| !!! | CTCTGTTTTTTAAATTTTTA+TGG | + | chr6_4:7156046-7156065 | Msa0974250:intron | 15.0% |
| !!! | CTGTTTTTTAAATTTTTATG+GGG | + | chr6_4:7156048-7156067 | Msa0974250:intron | 15.0% |
| !!! | ATTGTTTTTATGTTGATAAT+TGG | + | chr6_4:7156448-7156467 | Msa0974250:intron | 15.0% |
| !!! | TATTGTTATTAATTGTTTTC+AGG | + | chr6_4:7156656-7156675 | Msa0974250:intron | 15.0% |
| !!! | ATTGTTATTAATTGTTTTCA+GGG | + | chr6_4:7156657-7156676 | Msa0974250:intron | 15.0% |
| !! | AAAATGATAACATCAAAAAT+TGG | - | chr6_4:7157037-7157056 | None:intergenic | 15.0% |
| !! | TTTATATATTATATATTCCG+AGG | + | chr6_4:7157200-7157219 | Msa0974250:intron | 15.0% |
| !! | ATATGATGTTTATAAGAAAA+CGG | + | chr6_4:7158149-7158168 | Msa0974250:intron | 15.0% |
| !!! | ATAGCAATTTTTTCTATTTT+AGG | - | chr6_4:7158764-7158783 | None:intergenic | 15.0% |
| !! | CAAAATCATAAAATATACAA+AGG | - | chr6_4:7158804-7158823 | None:intergenic | 15.0% |
| !!! | TGAACTATAGTTTTAAATTA+GGG | - | chr6_4:7159022-7159041 | None:intergenic | 15.0% |
| !!! | ATGAACTATAGTTTTAAATT+AGG | - | chr6_4:7159023-7159042 | None:intergenic | 15.0% |
| !!! | CTTTATTATTGTACTTTTTT+TGG | + | chr6_4:7160177-7160196 | Msa0974250:three_prime_UTR | 15.0% |
| !! | ATTGACATTTGATATAAAAG+AGG | - | chr6_4:7155603-7155622 | None:intergenic | 20.0% |
| !!! | TCTGTTTCTGAATTTTTTAT+GGG | + | chr6_4:7155893-7155912 | Msa0974250:intron | 20.0% |
| !! | AGAAACAAATTAAGCAAAAA+AGG | - | chr6_4:7156427-7156446 | None:intergenic | 20.0% |
| !!! | TTTATGTTGATAATTGGTTA+TGG | + | chr6_4:7156454-7156473 | Msa0974250:intron | 20.0% |
| !!! | TTATGTTGATAATTGGTTAT+GGG | + | chr6_4:7156455-7156474 | Msa0974250:intron | 20.0% |
| !!! | TTTGATATTTTATGTGTCAA+TGG | + | chr6_4:7156725-7156744 | Msa0974250:intron | 20.0% |
| !!! | TGTATTTTCTCAAATTATTG+CGG | + | chr6_4:7156790-7156809 | Msa0974250:intron | 20.0% |
| !!! | CATTTTACCATGAATATTAT+TGG | + | chr6_4:7157051-7157070 | Msa0974250:intron | 20.0% |
| !! | GGATATGAAACAAAAAAAAA+AGG | - | chr6_4:7157433-7157452 | None:intergenic | 20.0% |
| !! | AGGTTTAAATTCCTATTATT+AGG | + | chr6_4:7157552-7157571 | Msa0974250:intron | 20.0% |
| !! | AAAGTTCTATACCTAATAAT+AGG | - | chr6_4:7157566-7157585 | None:intergenic | 20.0% |
| !! | CAAATGTCAATAAATAACAA+TGG | + | chr6_4:7157586-7157605 | Msa0974250:intron | 20.0% |
| !!! | TGACATTTTTGTTTTTTGTA+TGG | + | chr6_4:7157635-7157654 | Msa0974250:intron | 20.0% |
| !! | GTGATTATTAGTACATTATT+TGG | + | chr6_4:7157657-7157676 | Msa0974250:intron | 20.0% |
| !! | ATTATTAGTACATTATTTGG+TGG | + | chr6_4:7157660-7157679 | Msa0974250:intron | 20.0% |
| !!! | TTTTGTATTCATAGACTTAT+AGG | - | chr6_4:7157693-7157712 | None:intergenic | 20.0% |
| !! | TAACTATTGTAATTAACCTT+TGG | - | chr6_4:7157769-7157788 | None:intergenic | 20.0% |
| !! | TTATAAACATCATATTAGAC+TGG | - | chr6_4:7158144-7158163 | None:intergenic | 20.0% |
| !! | ACACATTAAAAATGTGTATA+AGG | - | chr6_4:7158458-7158477 | None:intergenic | 20.0% |
| !! | GTATTTAATATGTCTAACTT+AGG | - | chr6_4:7158730-7158749 | None:intergenic | 20.0% |
| !!! | AGAAAGGAATAACTATTTTA+AGG | - | chr6_4:7159360-7159379 | None:intergenic | 20.0% |
| !! | GATTCAAACTTTACAAAATT+AGG | + | chr6_4:7159494-7159513 | Msa0974250:intron | 20.0% |
| !! | ATATGATTAAAGTTTATGTG+GGG | - | chr6_4:7159868-7159887 | None:intergenic | 20.0% |
| !! | GATATGATTAAAGTTTATGT+GGG | - | chr6_4:7159869-7159888 | None:intergenic | 20.0% |
| !! | AGATATGATTAAAGTTTATG+TGG | - | chr6_4:7159870-7159889 | None:intergenic | 20.0% |
| !!! | TTTGTCTTTTTTTTTCTGTA+GGG | - | chr6_4:7160115-7160134 | None:intergenic | 20.0% |
| !!! | TTTTGTCTTTTTTTTTCTGT+AGG | - | chr6_4:7160116-7160135 | None:intergenic | 20.0% |
| !! | ATAACAAACTTCTATATTGA+TGG | - | chr6_4:7160285-7160304 | None:intergenic | 20.0% |
| ! | CATAAAAAATTCAGAAACAG+AGG | - | chr6_4:7155894-7155913 | None:intergenic | 25.0% |
| !!! | CTCTGTTTCTGAATTTTTTA+TGG | + | chr6_4:7155892-7155911 | Msa0974250:intron | 25.0% |
| !!! | CTGTTTCTGAATTTTTTATG+GGG | + | chr6_4:7155894-7155913 | Msa0974250:intron | 25.0% |
| !!! | ATTGCATTGAATTTTTCAGT+TGG | + | chr6_4:7155976-7155995 | Msa0974250:intron | 25.0% |
| ! | TTTAAAAAACAGAGGAAACA+GGG | - | chr6_4:7156040-7156059 | None:intergenic | 25.0% |
| ! | ATTTAAAAAACAGAGGAAAC+AGG | - | chr6_4:7156041-7156060 | None:intergenic | 25.0% |
| ! | AAACTTAATTTCAGCTCAAA+GGG | - | chr6_4:7156110-7156129 | None:intergenic | 25.0% |
| !! | GAACAAAGTTGAAAGATTTT+TGG | + | chr6_4:7156154-7156173 | Msa0974250:five_prime_UTR | 25.0% |
| !!! | AGTTGAAAGATTTTTGGTTT+TGG | + | chr6_4:7156160-7156179 | Msa0974250:five_prime_UTR | 25.0% |
| !!! | ATTTTTGGTTTTGGTTTGAA+TGG | + | chr6_4:7156169-7156188 | Msa0974250:exon | 25.0% |
| !!! | TTTTTGGTTTTGGTTTGAAT+GGG | + | chr6_4:7156170-7156189 | Msa0974250:exon | 25.0% |
| !! | GTATTTTCTCAAATTATTGC+GGG | + | chr6_4:7156791-7156810 | Msa0974250:intron | 25.0% |
| !!! | ATTTTTTGTGACAACTCATA+AGG | + | chr6_4:7156921-7156940 | Msa0974250:intron | 25.0% |
| ! | AACTCATCCAATAATATTCA+TGG | - | chr6_4:7157061-7157080 | None:intergenic | 25.0% |
| ! | TTAGAAGTCAAATGAATGAA+TGG | - | chr6_4:7157454-7157473 | None:intergenic | 25.0% |
| ! | GATTATTTGGATTTACTTTG+TGG | + | chr6_4:7157478-7157497 | Msa0974250:intron | 25.0% |
| ! | GATTTACTTTGTGGTTAATT+AGG | + | chr6_4:7157487-7157506 | Msa0974250:intron | 25.0% |
| ! | AGATTATAGGTTAGTAATGA+AGG | + | chr6_4:7157532-7157551 | Msa0974250:intron | 25.0% |
| !! | ATGTGCAAGTATGTAATTTT+TGG | - | chr6_4:7158086-7158105 | None:intergenic | 25.0% |
| ! | ACATTACACAGTCAATATAT+TGG | + | chr6_4:7158196-7158215 | Msa0974250:intron | 25.0% |
| !! | TTTTTAATGTGTTGTACAGA+TGG | + | chr6_4:7158466-7158485 | Msa0974250:intron | 25.0% |
| !! | TTTTAATGTGTTGTACAGAT+GGG | + | chr6_4:7158467-7158486 | Msa0974250:intron | 25.0% |
| !!! | GTTTTTAGTAAGCTACTTTT+TGG | + | chr6_4:7158548-7158567 | Msa0974250:CDS | 25.0% |
| ! | GCTGCAATATTTAATGTTAA+GGG | + | chr6_4:7158958-7158977 | Msa0974250:intron | 25.0% |
| ! | CATTTATATTCTAATGTTGC+AGG | + | chr6_4:7159081-7159100 | Msa0974250:intron | 25.0% |
| !! | GTATTAGAGAAAATTTTACC+TGG | - | chr6_4:7159315-7159334 | None:intergenic | 25.0% |
| !! | TATAAAGTCGAAAAGTATGT+CGG | - | chr6_4:7159337-7159356 | None:intergenic | 25.0% |
| ! | GATATCTCTTAATATATCCT+CGG | + | chr6_4:7159416-7159435 | Msa0974250:intron | 25.0% |
| !! | ATTTTACGATCAAGATCATA+TGG | + | chr6_4:7159657-7159676 | Msa0974250:intron | 25.0% |
| !!! | AAATATTGATAGTGACATGT+GGG | - | chr6_4:7159831-7159850 | None:intergenic | 25.0% |
| !! | ATCAATATTTCTATTTGTGC+CGG | + | chr6_4:7159841-7159860 | Msa0974250:intron | 25.0% |
| !! | TTTTCTTCTCCTTTTCTTTA+TGG | + | chr6_4:7160206-7160225 | Msa0974250:three_prime_UTR | 25.0% |
| !! | TTGATGGCTAAAATTAAACA+TGG | - | chr6_4:7160269-7160288 | None:intergenic | 25.0% |
| TTTGGAAAGAGAAATAGTGA+AGG | - | chr6_4:7155642-7155661 | None:intergenic | 30.0% | |
| !!! | GATGTTTTTTGATGAGGTTA+AGG | - | chr6_4:7155683-7155702 | None:intergenic | 30.0% |
| TTAAAAAACAGAGGAAACAG+GGG | - | chr6_4:7156039-7156058 | None:intergenic | 30.0% | |
| CAAACTTAATTTCAGCTCAA+AGG | - | chr6_4:7156111-7156130 | None:intergenic | 30.0% | |
| !! | GATGCATTGAATTTTTCAGT+TGG | + | chr6_4:7156130-7156149 | Msa0974250:intron | 30.0% |
| !!! | TTTTGGTTTTGGTTTGAATG+GGG | + | chr6_4:7156171-7156190 | Msa0974250:exon | 30.0% |
| ! | AGATTTTTGTGAATTGCCAA+AGG | + | chr6_4:7156226-7156245 | Msa0974250:CDS | 30.0% |
| CTGTTAGTAATTGTTTCCTT+TGG | - | chr6_4:7156245-7156264 | None:intergenic | 30.0% | |
| !!! | TTATTTTGGTATCCACATGT+CGG | + | chr6_4:7156610-7156629 | Msa0974250:intron | 30.0% |
| ATATTATTGGATGAGTTGTG+TGG | + | chr6_4:7157064-7157083 | Msa0974250:intron | 30.0% | |
| TATTATTGGATGAGTTGTGT+GGG | + | chr6_4:7157065-7157084 | Msa0974250:intron | 30.0% | |
| ! | CATTCATTTGACTTCTAATG+TGG | + | chr6_4:7157456-7157475 | Msa0974250:intron | 30.0% |
| ! | GACTTCTAATGTGGATTATT+TGG | + | chr6_4:7157465-7157484 | Msa0974250:intron | 30.0% |
| ! | GTGATAATGAGCTAGATTAT+AGG | + | chr6_4:7157519-7157538 | Msa0974250:intron | 30.0% |
| CTATGTCAATAAAACTCCAA+AGG | + | chr6_4:7157750-7157769 | Msa0974250:intron | 30.0% | |
| ACACAAACACTGGTAAAAAT+CGG | - | chr6_4:7157874-7157893 | None:intergenic | 30.0% | |
| ATCCTAATATGCCATATTTC+AGG | + | chr6_4:7158039-7158058 | Msa0974250:CDS | 30.0% | |
| TCCTAATATGCCATATTTCA+GGG | + | chr6_4:7158040-7158059 | Msa0974250:CDS | 30.0% | |
| TTATGAGTGTGAGAAATTCT+CGG | + | chr6_4:7158106-7158125 | Msa0974250:CDS | 30.0% | |
| ATTCATAATATCTCGAATGC+AGG | + | chr6_4:7158290-7158309 | Msa0974250:intron | 30.0% | |
| TTCATAATATCTCGAATGCA+GGG | + | chr6_4:7158291-7158310 | Msa0974250:intron | 30.0% | |
| CAAACAGTTTGCAAAATATG+CGG | + | chr6_4:7158328-7158347 | Msa0974250:intron | 30.0% | |
| !! | GAAGAGTTCTGTTTTATTGA+TGG | + | chr6_4:7158429-7158448 | Msa0974250:intron | 30.0% |
| TACTAAAAACTGTCATTCCA+GGG | - | chr6_4:7158538-7158557 | None:intergenic | 30.0% | |
| TTACTAAAAACTGTCATTCC+AGG | - | chr6_4:7158539-7158558 | None:intergenic | 30.0% | |
| TGCACATCAAATCATATGAT+TGG | + | chr6_4:7158576-7158595 | Msa0974250:CDS | 30.0% | |
| GCACATCAAATCATATGATT+GGG | + | chr6_4:7158577-7158596 | Msa0974250:CDS | 30.0% | |
| CGCTGCAATATTTAATGTTA+AGG | + | chr6_4:7158957-7158976 | Msa0974250:intron | 30.0% | |
| ! | AATGCTAATTCTTTTCAGCT+AGG | - | chr6_4:7159065-7159084 | None:intergenic | 30.0% |
| ! | GAAAATTTTACCTGGAAAGT+TGG | - | chr6_4:7159307-7159326 | None:intergenic | 30.0% |
| CATAAAATGAAGTGTACTAG+CGG | - | chr6_4:7159383-7159402 | None:intergenic | 30.0% | |
| ATCATGTAGTTAAGTGATCT+TGG | + | chr6_4:7159466-7159485 | Msa0974250:intron | 30.0% | |
| AGTCATTTGATCTTATCCAA+TGG | + | chr6_4:7159540-7159559 | Msa0974250:intron | 30.0% | |
| AGAAGCAACTACTTAGATAT+TGG | + | chr6_4:7159683-7159702 | Msa0974250:intron | 30.0% | |
| CAACTACTTAGATATTGGAT+CGG | + | chr6_4:7159688-7159707 | Msa0974250:intron | 30.0% | |
| AACTACTTAGATATTGGATC+GGG | + | chr6_4:7159689-7159708 | Msa0974250:intron | 30.0% | |
| TCAATCAAGATCAAATGACT+TGG | - | chr6_4:7159756-7159775 | None:intergenic | 30.0% | |
| !! | GAAATATTGATAGTGACATG+TGG | - | chr6_4:7159832-7159851 | None:intergenic | 30.0% |
| TCTCATGAAATTTCAGTTGA+AGG | + | chr6_4:7159902-7159921 | Msa0974250:intron | 30.0% | |
| AGGAAAGGAATGTTTATGAA+TGG | + | chr6_4:7159942-7159961 | Msa0974250:CDS | 30.0% | |
| TTATGAATGGCTACAAGAAA+AGG | + | chr6_4:7159955-7159974 | Msa0974250:CDS | 30.0% | |
| !! | CCACTTTTAAATCTTCAAGT+TGG | - | chr6_4:7159982-7160001 | None:intergenic | 30.0% |
| CCAACTTGAAGATTTAAAAG+TGG | + | chr6_4:7159979-7159998 | Msa0974250:CDS | 30.0% | |
| CTTGAAGATTTAAAAGTGGA+AGG | + | chr6_4:7159983-7160002 | Msa0974250:CDS | 30.0% | |
| ! | CAATCTTGTAGATTTTATGC+TGG | + | chr6_4:7160150-7160169 | Msa0974250:three_prime_UTR | 30.0% |
| TCTGTTGTTCCATAAAGAAA+AGG | - | chr6_4:7160218-7160237 | None:intergenic | 30.0% | |
| CTTTATGGAACAACAGAAAA+AGG | + | chr6_4:7160221-7160240 | Msa0974250:three_prime_UTR | 30.0% | |
| AAAGAGAAGTCAGAAAACCA+GGG | - | chr6_4:7155524-7155543 | None:intergenic | 35.0% | |
| AAGAAGTAGCAAAGAAGAAG+GGG | - | chr6_4:7155580-7155599 | None:intergenic | 35.0% | |
| GAAGAAGTAGCAAAGAAGAA+GGG | - | chr6_4:7155581-7155600 | None:intergenic | 35.0% | |
| GAAAGAGAAATAGTGAAGGT+TGG | - | chr6_4:7155638-7155657 | None:intergenic | 35.0% | |
| !!! | GTTGAGGATGTTTTTTGATG+AGG | - | chr6_4:7155689-7155708 | None:intergenic | 35.0% |
| !!! | ACATTGTTTTTTTGGTCGCT+AGG | - | chr6_4:7155739-7155758 | None:intergenic | 35.0% |
| AACAAAACAGAGGAAAACAG+AGG | - | chr6_4:7155865-7155884 | None:intergenic | 35.0% | |
| GAGGAATAGTAACAAAACAG+AGG | - | chr6_4:7155875-7155894 | None:intergenic | 35.0% | |
| AGAACCTTAGCTGATAGAAA+AGG | + | chr6_4:7156200-7156219 | Msa0974250:CDS | 35.0% | |
| ! | TCTTCCTTTTCTATCAGCTA+AGG | - | chr6_4:7156207-7156226 | None:intergenic | 35.0% |
| AGGAAACAATTACTAACAGC+AGG | + | chr6_4:7156246-7156265 | Msa0974250:CDS | 35.0% | |
| !!! | GAGACTTTTTGAGACTTGTA+AGG | + | chr6_4:7156313-7156332 | Msa0974250:CDS | 35.0% |
| ATATGCGTCAGTATCCTTAT+TGG | + | chr6_4:7156817-7156836 | Msa0974250:intron | 35.0% | |
| ATTATTGGATGAGTTGTGTG+GGG | + | chr6_4:7157066-7157085 | Msa0974250:intron | 35.0% | |
| ATAGGCAAATCAAAGAACCT+CGG | - | chr6_4:7157220-7157239 | None:intergenic | 35.0% | |
| CTAGAGTTGTATACTTTGCA+TGG | - | chr6_4:7157973-7157992 | None:intergenic | 35.0% | |
| ! | AAAACCAGAAGATGTTGACT+TGG | + | chr6_4:7158016-7158035 | Msa0974250:CDS | 35.0% |
| TAGAGATATCCCAAGTGAAT+GGG | - | chr6_4:7158177-7158196 | None:intergenic | 35.0% | |
| ! | GTCAATATATTGGTAGCCAT+TGG | + | chr6_4:7158206-7158225 | Msa0974250:intron | 35.0% |
| ! | GTCAATACATTGGTAACAGT+TGG | - | chr6_4:7158263-7158282 | None:intergenic | 35.0% |
| AATTCACGCAGTCAATACAT+TGG | - | chr6_4:7158273-7158292 | None:intergenic | 35.0% | |
| !! | ATATTTTGTTTGCCACCTTC+TGG | + | chr6_4:7158491-7158510 | Msa0974250:CDS | 35.0% |
| CATCAAATCATATGATTGGG+TGG | + | chr6_4:7158580-7158599 | Msa0974250:CDS | 35.0% | |
| TTGAAAATGGTAGGAGATTC+AGG | - | chr6_4:7158617-7158636 | None:intergenic | 35.0% | |
| ! | ACTTTCTGAGGGTTTGAAAA+TGG | - | chr6_4:7158630-7158649 | None:intergenic | 35.0% |
| AAGTACTACTCACTTTCTGA+GGG | - | chr6_4:7158641-7158660 | None:intergenic | 35.0% | |
| TAAGTACTACTCACTTTCTG+AGG | - | chr6_4:7158642-7158661 | None:intergenic | 35.0% | |
| AGTTAACGGTTGCAATGTAA+CGG | - | chr6_4:7158885-7158904 | None:intergenic | 35.0% | |
| TATAAGATAGAAGGGTTGCA+AGG | - | chr6_4:7159156-7159175 | None:intergenic | 35.0% | |
| CCTCAGGATATAAGATAGAA+GGG | - | chr6_4:7159164-7159183 | None:intergenic | 35.0% | |
| TCCTCAGGATATAAGATAGA+AGG | - | chr6_4:7159165-7159184 | None:intergenic | 35.0% | |
| TCTATCTTATATCCTGAGGA+TGG | + | chr6_4:7159165-7159184 | Msa0974250:CDS | 35.0% | |
| TTACCTGGAAAGTTGGAAAA+CGG | - | chr6_4:7159300-7159319 | None:intergenic | 35.0% | |
| ! | TTGCGTGTTTTCTTTTACTG+CGG | - | chr6_4:7159447-7159466 | None:intergenic | 35.0% |
| ATGTTGCAATGAATTCCATC+CGG | - | chr6_4:7159587-7159606 | None:intergenic | 35.0% | |
| AAATATACGTTGCGTGACTT+TGG | - | chr6_4:7159641-7159660 | None:intergenic | 35.0% | |
| ATTAAAGTTTATGTGGGGTC+CGG | - | chr6_4:7159863-7159882 | None:intergenic | 35.0% | |
| TAAACATTCCTTTCCTCTTC+TGG | - | chr6_4:7159938-7159957 | None:intergenic | 35.0% | |
| AAGAGAAGTCAGAAAACCAG+GGG | - | chr6_4:7155523-7155542 | None:intergenic | 40.0% | |
| CAAAGAGAAGTCAGAAAACC+AGG | - | chr6_4:7155525-7155544 | None:intergenic | 40.0% | |
| GTTGAGAGAGAGAAAACAGT+TGG | - | chr6_4:7155554-7155573 | None:intergenic | 40.0% | |
| GGAAGAAGTAGCAAAGAAGA+AGG | - | chr6_4:7155582-7155601 | None:intergenic | 40.0% | |
| !!! | GGTCGCTAGGATGTTTTTTT+TGG | - | chr6_4:7155726-7155745 | None:intergenic | 40.0% |
| AACAGAGGAAACAGAGGAAT+TGG | - | chr6_4:7155850-7155869 | None:intergenic | 40.0% | |
| CAATTACTAACAGCAGGTCA+AGG | + | chr6_4:7156252-7156271 | Msa0974250:CDS | 40.0% | |
| GTCTCAAAAAGTCTCTGAAC+CGG | - | chr6_4:7156308-7156327 | None:intergenic | 40.0% | |
| AAGGAAGTCTTTGCTTCTAG+TGG | + | chr6_4:7156332-7156351 | Msa0974250:CDS | 40.0% | |
| AGGAAGTCTTTGCTTCTAGT+GGG | + | chr6_4:7156333-7156352 | Msa0974250:CDS | 40.0% | |
| AACTTATCAATGTCCTGAGC+TGG | - | chr6_4:7156374-7156393 | None:intergenic | 40.0% | |
| CTCAGGACATTGATAAGTTG+CGG | + | chr6_4:7156375-7156394 | Msa0974250:CDS | 40.0% | |
| ! | GATAAGTTGCGGTCTGTTTT+AGG | + | chr6_4:7156386-7156405 | Msa0974250:CDS | 40.0% |
| CACTCATCAAACACAAGACA+CGG | - | chr6_4:7156859-7156878 | None:intergenic | 40.0% | |
| TTATTGGATGAGTTGTGTGG+GGG | + | chr6_4:7157067-7157086 | Msa0974250:intron | 40.0% | |
| ACACATCACATCTCACACTA+AGG | - | chr6_4:7157135-7157154 | None:intergenic | 40.0% | |
| ACAATGTGATGTCAAGTCCA+TGG | + | chr6_4:7157320-7157339 | Msa0974250:intron | 40.0% | |
| GTCTCATTCACATTAGACCA+TGG | - | chr6_4:7157340-7157359 | None:intergenic | 40.0% | |
| TGAAACACTGACACATCAGA+TGG | + | chr6_4:7157796-7157815 | Msa0974250:intron | 40.0% | |
| GTACGTGGTTCATAGGTTAT+AGG | + | chr6_4:7157903-7157922 | Msa0974250:intron | 40.0% | |
| ! | TAGCTTCTCTTTTGTGCAGA+TGG | + | chr6_4:7157990-7158009 | Msa0974250:intron | 40.0% |
| GCCCTGAAATATGGCATATT+AGG | - | chr6_4:7158044-7158063 | None:intergenic | 40.0% | |
| GATGCATTAGCCCTGAAATA+TGG | - | chr6_4:7158053-7158072 | None:intergenic | 40.0% | |
| AAAACGGATCCCATTCACTT+GGG | + | chr6_4:7158165-7158184 | Msa0974250:intron | 40.0% | |
| GTAGAGATATCCCAAGTGAA+TGG | - | chr6_4:7158178-7158197 | None:intergenic | 40.0% | |
| ! | ACAGTTCGATCTGAAACCAA+TGG | - | chr6_4:7158225-7158244 | None:intergenic | 40.0% |
| TGTAGAGGAATAACACCAGA+AGG | - | chr6_4:7158509-7158528 | None:intergenic | 40.0% | |
| ATTCCTCTACATAATCACCC+TGG | + | chr6_4:7158518-7158537 | Msa0974250:CDS | 40.0% | |
| ATTCCAGGGTGATTATGTAG+AGG | - | chr6_4:7158524-7158543 | None:intergenic | 40.0% | |
| AAAATGGTAGGAGATTCAGG+AGG | - | chr6_4:7158614-7158633 | None:intergenic | 40.0% | |
| TCTGAGGGTTTGAAAATGGT+AGG | - | chr6_4:7158626-7158645 | None:intergenic | 40.0% | |
| ACATTGCAACCGTTAACTTC+AGG | + | chr6_4:7158887-7158906 | Msa0974250:intron | 40.0% | |
| GCACTTTCACCTGAAGTTAA+CGG | - | chr6_4:7158899-7158918 | None:intergenic | 40.0% | |
| ! | AGGGAAAGTACAGACAAATG+TGG | + | chr6_4:7158977-7158996 | Msa0974250:intron | 40.0% |
| ! | ACTTTTGCTAACCTCAACTC+AGG | - | chr6_4:7159108-7159127 | None:intergenic | 40.0% |
| GTTGAGGTTAGCAAAAGTGA+AGG | + | chr6_4:7159110-7159129 | Msa0974250:CDS | 40.0% | |
| CCCTTCTATCTTATATCCTG+AGG | + | chr6_4:7159161-7159180 | Msa0974250:CDS | 40.0% | |
| ATCTTATATCCTGAGGATGG+TGG | + | chr6_4:7159168-7159187 | Msa0974250:CDS | 40.0% | |
| TGTGCAGTTCTTGATGTTCT+TGG | + | chr6_4:7159222-7159241 | Msa0974250:CDS | 40.0% | |
| CCATCAAGATCAGAATATGG+AGG | - | chr6_4:7159249-7159268 | None:intergenic | 40.0% | |
| CCTCCATATTCTGATCTTGA+TGG | + | chr6_4:7159246-7159265 | Msa0974250:CDS | 40.0% | |
| CTGCCATCAAGATCAGAATA+TGG | - | chr6_4:7159252-7159271 | None:intergenic | 40.0% | |
| ! | TATCCGTTTTCCAACTTTCC+AGG | + | chr6_4:7159294-7159313 | Msa0974250:CDS | 40.0% |
| CAATCGTGAATCTCAACCAT+TGG | - | chr6_4:7159559-7159578 | None:intergenic | 40.0% | |
| AAGCACACAGTGAGACAAAT+CGG | - | chr6_4:7159785-7159804 | None:intergenic | 40.0% | |
| TATCCATACCAGAAGAGGAA+AGG | + | chr6_4:7159927-7159946 | Msa0974250:CDS | 40.0% | |
| ATTCCTTTCCTCTTCTGGTA+TGG | - | chr6_4:7159933-7159952 | None:intergenic | 40.0% | |
| TGCTAACTCTCCACAATAGT+TGG | - | chr6_4:7160025-7160044 | None:intergenic | 40.0% | |
| !! | GTGAAGGTTGGTGAAGATTG+AGG | - | chr6_4:7155626-7155645 | None:intergenic | 45.0% |
| ! | GGTTGCACAAGTTGTTGTTG+AGG | - | chr6_4:7155705-7155724 | None:intergenic | 45.0% |
| GAGGAAAACAGAGGAAACAG+AGG | - | chr6_4:7155856-7155875 | None:intergenic | 45.0% | |
| AACAGAGGAAACAGGGGAAT+TGG | - | chr6_4:7156033-7156052 | None:intergenic | 45.0% | |
| TTACTAACAGCAGGTCAAGG+AGG | + | chr6_4:7156255-7156274 | Msa0974250:CDS | 45.0% | |
| TCAAAAAGTCTCTGAACCGG+CGG | - | chr6_4:7156305-7156324 | None:intergenic | 45.0% | |
| TATCAATGTCCTGAGCTGGT+GGG | - | chr6_4:7156370-7156389 | None:intergenic | 45.0% | |
| TTATCAATGTCCTGAGCTGG+TGG | - | chr6_4:7156371-7156390 | None:intergenic | 45.0% | |
| !!! | CGGTGTCGTGTTGATTTTCA+TGG | + | chr6_4:7156630-7156649 | Msa0974250:intron | 45.0% |
| TCAATGGATACCGACATGAC+AGG | + | chr6_4:7156741-7156760 | Msa0974250:intron | 45.0% | |
| CAATGGATACCGACATGACA+GGG | + | chr6_4:7156742-7156761 | Msa0974250:intron | 45.0% | |
| AGTATGTGTCCCTGTCATGT+CGG | - | chr6_4:7156754-7156773 | None:intergenic | 45.0% | |
| ! | TCCTTATTGGTGTCCCTGTT+TGG | + | chr6_4:7156830-7156849 | Msa0974250:intron | 45.0% |
| ACCAAACAGGGACACCAATA+AGG | - | chr6_4:7156834-7156853 | None:intergenic | 45.0% | |
| TATTGGATGAGTTGTGTGGG+GGG | + | chr6_4:7157068-7157087 | Msa0974250:intron | 45.0% | |
| ! | ACATCAGATGGAAAGCGTGT+CGG | + | chr6_4:7157808-7157827 | Msa0974250:intron | 45.0% |
| CGTTTGTGTACGTGGTTCAT+AGG | + | chr6_4:7157896-7157915 | Msa0974250:intron | 45.0% | |
| GGATCCAAGTCAACATCTTC+TGG | - | chr6_4:7158023-7158042 | None:intergenic | 45.0% | |
| GAAAACGGATCCCATTCACT+TGG | + | chr6_4:7158164-7158183 | Msa0974250:intron | 45.0% | |
| AGAGGAATAACACCAGAAGG+TGG | - | chr6_4:7158506-7158525 | None:intergenic | 45.0% | |
| ! | GGTGAAAGTGCAGACAAATG+CGG | + | chr6_4:7158908-7158927 | Msa0974250:intron | 45.0% |
| AGACAAATGCGGCTGTAACT+TGG | + | chr6_4:7158919-7158938 | Msa0974250:intron | 45.0% | |
| TGAAGTGTACTAGCGGAGAA+AGG | - | chr6_4:7159376-7159395 | None:intergenic | 45.0% | |
| AGGACTATCCATACCAGAAG+AGG | + | chr6_4:7159922-7159941 | Msa0974250:CDS | 45.0% | |
| GTGGAAGGAAGAATGTACAG+TGG | + | chr6_4:7159998-7160017 | Msa0974250:CDS | 45.0% | |
| GTACAGTGGTCCAACTATTG+TGG | + | chr6_4:7160012-7160031 | Msa0974250:CDS | 45.0% | |
| !!! | AAATTTTTATTTTATTTGAT+AGG | - | chr6_4:7157238-7157257 | None:intergenic | 5.0% |
| GTCTTTGCTTCTAGTGGGAC+AGG | + | chr6_4:7156338-7156357 | Msa0974250:CDS | 50.0% | |
| !! | TGCGGTCTGTTTTAGGTACG+AGG | + | chr6_4:7156393-7156412 | Msa0974250:intron | 50.0% |
| ATCAACACGACACCGACATG+TGG | - | chr6_4:7156625-7156644 | None:intergenic | 50.0% | |
| CAAGACACGGACACCAAACA+GGG | - | chr6_4:7156846-7156865 | None:intergenic | 50.0% | |
| ACAAGACACGGACACCAAAC+AGG | - | chr6_4:7156847-7156866 | None:intergenic | 50.0% | |
| CACAAACGCGACACAAACAC+TGG | - | chr6_4:7157884-7157903 | None:intergenic | 50.0% | |
| TTGTGTCGCGTTTGTGTACG+TGG | + | chr6_4:7157888-7157907 | Msa0974250:intron | 50.0% | |
| GGGCTAATGCATCTCACAGA+AGG | + | chr6_4:7158060-7158079 | Msa0974250:CDS | 50.0% | |
| ! | CAACTGCGGTGGTTTGGATA+TGG | - | chr6_4:7158850-7158869 | None:intergenic | 50.0% |
| CAACTACAACTGCGGTGGTT+TGG | - | chr6_4:7158856-7158875 | None:intergenic | 50.0% | |
| AACCACCGCAGTTGTAGTTG+CGG | + | chr6_4:7158856-7158875 | Msa0974250:intron | 50.0% | |
| GGTAACCGCAACTACAACTG+CGG | - | chr6_4:7158864-7158883 | None:intergenic | 50.0% | |
| ATGCGGCTGTAACTTGGTCA+CGG | + | chr6_4:7158925-7158944 | Msa0974250:intron | 50.0% | |
| ATGTTGCAGGTCCTGAGTTG+AGG | + | chr6_4:7159094-7159113 | Msa0974250:intron | 50.0% | |
| ! | CTTTTACTGCGGAGAATCCG+AGG | - | chr6_4:7159436-7159455 | None:intergenic | 50.0% |
| GAGATTCACGATTGCGTGAC+CGG | + | chr6_4:7159565-7159584 | Msa0974250:intron | 50.0% | |
| AGGAATTGTCCCACCAGCTC+AGG | + | chr6_4:7156358-7156377 | Msa0974250:CDS | 55.0% | |
| GTGTCACAGTGTCGTGTCAG+TGG | - | chr6_4:7156557-7156576 | None:intergenic | 55.0% | |
| ! | GATGGAAAGCGTGTCGGTGT+CGG | + | chr6_4:7157814-7157833 | Msa0974250:intron | 55.0% |
| AACCGCAACTACAACTGCGG+TGG | - | chr6_4:7158861-7158880 | None:intergenic | 55.0% | |
| TGCAAGTTGCCACCATCCTC+AGG | - | chr6_4:7159180-7159199 | None:intergenic | 55.0% | |
| TTCACGATTGCGTGACCGGA+TGG | + | chr6_4:7159569-7159588 | Msa0974250:intron | 55.0% | |
| ACAGCAGGTCAAGGAGGAGC+CGG | + | chr6_4:7156261-7156280 | Msa0974250:CDS | 60.0% | |
| GCATCTTCTTCTGACGCCGC+CGG | - | chr6_4:7156283-7156302 | None:intergenic | 60.0% | |
| GCGTCAGAAGAAGATGCCGC+CGG | + | chr6_4:7156286-7156305 | Msa0974250:CDS | 60.0% | |
| GCAGGTCAAGGAGGAGCCGG+CGG | + | chr6_4:7156264-7156283 | Msa0974250:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_4 | gene | 7155510 | 7160343 | 7155510 | ID=Msa0974250;Name=Msa0974250 |
| chr6_4 | mRNA | 7155510 | 7160343 | 7155510 | ID=Msa0974250-mRNA-1;Parent=Msa0974250;Name=Msa0974250-mRNA-1;_AED=0.14;_eAED=0.14;_QI=286|1|1|1|0.8|0.66|6|301|279 |
| chr6_4 | exon | 7155510 | 7155756 | 7155510 | ID=Msa0974250-mRNA-1:exon:2815;Parent=Msa0974250-mRNA-1 |
| chr6_4 | exon | 7156149 | 7156407 | 7156149 | ID=Msa0974250-mRNA-1:exon:2816;Parent=Msa0974250-mRNA-1 |
| chr6_4 | exon | 7158009 | 7158127 | 7158009 | ID=Msa0974250-mRNA-1:exon:2817;Parent=Msa0974250-mRNA-1 |
| chr6_4 | exon | 7158485 | 7158647 | 7158485 | ID=Msa0974250-mRNA-1:exon:2818;Parent=Msa0974250-mRNA-1 |
| chr6_4 | exon | 7159103 | 7159315 | 7159103 | ID=Msa0974250-mRNA-1:exon:2819;Parent=Msa0974250-mRNA-1 |
| chr6_4 | exon | 7159918 | 7160343 | 7159918 | ID=Msa0974250-mRNA-1:exon:2820;Parent=Msa0974250-mRNA-1 |
| chr6_4 | five_prime_UTR | 7155510 | 7155756 | 7155510 | ID=Msa0974250-mRNA-1:five_prime_utr;Parent=Msa0974250-mRNA-1 |
| chr6_4 | five_prime_UTR | 7156149 | 7156187 | 7156149 | ID=Msa0974250-mRNA-1:five_prime_utr;Parent=Msa0974250-mRNA-1 |
| chr6_4 | CDS | 7156188 | 7156407 | 7156188 | ID=Msa0974250-mRNA-1:cds;Parent=Msa0974250-mRNA-1 |
| chr6_4 | CDS | 7158009 | 7158127 | 7158009 | ID=Msa0974250-mRNA-1:cds;Parent=Msa0974250-mRNA-1 |
| chr6_4 | CDS | 7158485 | 7158647 | 7158485 | ID=Msa0974250-mRNA-1:cds;Parent=Msa0974250-mRNA-1 |
| chr6_4 | CDS | 7159103 | 7159315 | 7159103 | ID=Msa0974250-mRNA-1:cds;Parent=Msa0974250-mRNA-1 |
| chr6_4 | CDS | 7159918 | 7160042 | 7159918 | ID=Msa0974250-mRNA-1:cds;Parent=Msa0974250-mRNA-1 |
| chr6_4 | three_prime_UTR | 7160043 | 7160343 | 7160043 | ID=Msa0974250-mRNA-1:three_prime_utr;Parent=Msa0974250-mRNA-1 |
| Gene Sequence |
| Protein sequence |
