AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1182530


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1182530 MtrunA17_Chr8g0335881 97.260 73 2 0 1 73 1 73 2.51e-46 148
Msa1182530 MtrunA17_Chr8g0337361 97.260 73 2 0 1 73 60 132 5.31e-45 149
Msa1182530 MtrunA17_Chr8g0337371 86.301 73 10 0 1 73 496 568 2.34e-39 138
Msa1182530 MtrunA17_Chr8g0337371 84.932 73 11 0 1 73 49 121 8.75e-38 134
Msa1182530 MtrunA17_Chr8g0337451 82.258 62 10 1 1 62 1 61 2.96e-30 109
Msa1182530 MtrunA17_Chr8g0337471 77.049 61 14 0 1 61 1 61 3.36e-30 109
Msa1182530 MtrunA17_Chr8g0337491 81.667 60 11 0 1 60 1 60 7.89e-30 109
Msa1182530 MtrunA17_Chr8g0337491 77.778 54 12 0 1 54 367 420 3.66e-25 97.4
Msa1182530 MtrunA17_Chr4g0043061 58.333 60 24 1 4 63 10 68 1.87e-16 72.8
Msa1182530 MtrunA17_Chr7g0214831 48.276 58 28 2 1 57 3 59 1.45e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1182530 AT3G03080.1 63.889 72 24 2 2 73 7 76 2.90e-23 91.7
Msa1182530 AT1G26320.2 53.947 76 34 1 4 79 9 83 6.43e-21 85.5
Msa1182530 AT1G26320.1 53.947 76 34 1 4 79 9 83 6.72e-21 85.5
Msa1182530 AT5G16970.1 57.534 73 27 2 6 75 5 76 2.29e-20 84.0
Msa1182530 AT5G17000.2 64.912 57 19 1 6 62 5 60 5.57e-20 81.6
Msa1182530 AT5G17000.1 64.912 57 19 1 6 62 5 60 1.21e-19 82.0
Msa1182530 AT5G16990.1 63.158 57 20 1 6 62 4 59 5.19e-19 80.1
Msa1182530 AT5G37980.1 63.158 57 20 1 6 62 12 67 1.19e-17 76.6
Msa1182530 AT5G37940.1 63.158 57 20 1 6 62 12 67 1.89e-17 75.9
Msa1182530 AT5G38000.2 59.649 57 22 1 6 62 12 67 2.67e-16 72.8
Msa1182530 AT5G38000.3 59.649 57 22 1 6 62 12 67 2.92e-16 72.8
Msa1182530 AT5G38000.1 59.649 57 22 1 6 62 12 67 2.95e-16 72.8
Msa1182530 AT5G16960.2 56.452 62 26 1 1 62 1 61 1.47e-15 70.9
Msa1182530 AT5G16960.1 56.452 62 26 1 1 62 1 61 1.47e-15 70.9
Msa1182530 AT3G59845.1 47.436 78 38 2 4 79 5 81 1.89e-15 70.5
Msa1182530 AT1G65560.1 58.182 55 21 2 4 57 7 60 6.75e-14 66.2

Find 111 sgRNAs with CRISPR-Local

Find 481 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGTTCTTCTTTGTAGTTAA+AGG 0.191955 8_1:-17675694 None:intergenic
GATCTCTTGAAGAATAAATT+TGG 0.210627 8_1:+17675660 Msa1182530:three_prime_UTR
TAGTTTGGGGAATGACTAAA+TGG 0.237323 8_1:+17672504 Msa1182530:three_prime_UTR
ACCTGAAGGTGTCACAAATT+TGG 0.261566 8_1:+17676177 Msa1182530:three_prime_UTR
TCCTATTATACCGGAATTCT+TGG 0.276985 8_1:+17675115 Msa1182530:three_prime_UTR
GCCAAATTTGTGACACCTTC+AGG 0.288617 8_1:-17676178 None:intergenic
AAGTATATGTCAATGCCTTC+TGG 0.290715 8_1:-17676052 None:intergenic
TCACCTTTATACAAAATTCT+TGG 0.290796 8_1:+17676255 Msa1182530:three_prime_UTR
AAATCATCTTTCTTATAATC+TGG 0.299191 8_1:-17672482 None:intergenic
CTTGTGTATGAAGCATTCTT+TGG 0.299591 8_1:+17676498 Msa1182530:three_prime_UTR
TTTCTCACTTGTGCCATGTT+TGG 0.306479 8_1:-17671204 None:intergenic
TATGCTGGTTTCTTTGAATT+AGG 0.306561 8_1:+17675262 Msa1182530:three_prime_UTR
TAAGAAAGATGATTTAGTTT+GGG 0.308474 8_1:+17672490 Msa1182530:three_prime_UTR
ATAAGAAAGATGATTTAGTT+TGG 0.311139 8_1:+17672489 Msa1182530:three_prime_UTR
TGTGAGATCATTCCACTTAC+AGG 0.322522 8_1:-17676139 None:intergenic
ACCAAGAATTCCGGTATAAT+AGG 0.338961 8_1:-17675116 None:intergenic
ACATATACTTTGAGAATGTT+GGG 0.340520 8_1:+17676065 Msa1182530:three_prime_UTR
ACCTCAATGCAGCTTTAAAA+AGG 0.376014 8_1:+17675718 Msa1182530:three_prime_UTR
AGCATTCTTTGGATGACCTT+TGG 0.376909 8_1:+17676509 Msa1182530:three_prime_UTR
GGTGCTGTTGGTCAACTTGT+TGG 0.378160 8_1:+17675328 Msa1182530:three_prime_UTR
CAATAGTGTCCTTGGCCATC+AGG 0.381937 8_1:-17669296 None:intergenic
CAATAGTGTCCTTGGCCATC+AGG 0.381937 8_1:-17671383 None:intergenic
TTTGAGAAGAACAACATCAT+TGG 0.385374 8_1:-17669238 None:intergenic
TATAGTTTGGTTCCTACAAC+TGG 0.385625 8_1:+17675058 Msa1182530:three_prime_UTR
TTGCAGCCATTGACAGGATT+AGG 0.387244 8_1:+17672431 Msa1182530:intron
GACATATACTTTGAGAATGT+TGG 0.390653 8_1:+17676064 Msa1182530:three_prime_UTR
ACTTGTGCCATGTTTGGAAT+TGG 0.395712 8_1:-17671198 None:intergenic
TTTAAAGCTGCATTGAGGTC+TGG 0.396923 8_1:-17675714 None:intergenic
AGCATATATACCAAGAATTC+CGG 0.397211 8_1:-17675125 None:intergenic
AATGGTCCTGCTGCATTGAT+TGG 0.402266 8_1:+17676346 Msa1182530:three_prime_UTR
GTGTCTAAAGTTGTAGAATC+TGG 0.408050 8_1:+17672455 Msa1182530:three_prime_UTR
TGTTATGTTGTTGGAAGTGC+TGG 0.408681 8_1:+17675373 Msa1182530:three_prime_UTR
TTTGAGCAGAACTACATCAT+TGG 0.414334 8_1:-17671325 None:intergenic
GTTTATGTTTCAGCTGCATC+TGG 0.415560 8_1:+17675307 Msa1182530:three_prime_UTR
TAAATGGGAAGAGTATAGTT+TGG 0.417552 8_1:+17675045 Msa1182530:intron
CCAGCATATGCAGTCATTCC+CGG 0.420317 8_1:-17675247 None:intergenic
GGACTTGGTGGTCTCACCCC+TGG 0.422269 8_1:+17669321 Msa1182530:CDS
GGACTTGGTGGTCTCACCCC+TGG 0.422269 8_1:+17671408 Msa1182530:three_prime_UTR
CAACATTGCGACCACTGTAT+AGG 0.423940 8_1:-17676369 None:intergenic
AGAAGGAAAGGTTGTGTATG+TGG 0.448394 8_1:+17676300 Msa1182530:three_prime_UTR
ATGGCCAAGGACACTATTGC+AGG 0.448653 8_1:+17669300 Msa1182530:CDS
ATGGCCAAGGACACTATTGC+AGG 0.448653 8_1:+17671387 Msa1182530:three_prime_UTR
ACGTTCATGTCTGATTCTAT+AGG 0.452868 8_1:-17671264 None:intergenic
GAGTAATTGCAGCCATTGAC+AGG 0.454761 8_1:+17672425 Msa1182530:intron
TTGCATGGTTGTTATGTTGT+TGG 0.455131 8_1:+17675364 Msa1182530:three_prime_UTR
TCAGCTGCATCTGGTGCTGT+TGG 0.461947 8_1:+17675316 Msa1182530:three_prime_UTR
CCTTGGCCATCAGGATTCTC+AGG 0.463885 8_1:-17669287 None:intergenic
GTCCCACTTTCCTATTATAC+CGG 0.473926 8_1:+17675106 Msa1182530:three_prime_UTR
ACGTTCATGTCTGATTCCTT+AGG 0.476904 8_1:-17669177 None:intergenic
TTGTTTGAGTACAGGTATGC+CGG 0.481096 8_1:+17675228 Msa1182530:intron
GACACTATTGCAGGACTTGG+TGG 0.484411 8_1:+17669309 Msa1182530:CDS
GACACTATTGCAGGACTTGG+TGG 0.484411 8_1:+17671396 Msa1182530:three_prime_UTR
CACTTACAGGTATGCGGCCA+TGG 0.490910 8_1:-17676126 None:intergenic
CTATACAGTGGTCGCAATGT+TGG 0.500296 8_1:+17676370 Msa1182530:three_prime_UTR
TTCCTTCTCTAATAAGAGAC+AGG 0.504672 8_1:-17676285 None:intergenic
GTCCTGTCTCTTATTAGAGA+AGG 0.513684 8_1:+17676283 Msa1182530:three_prime_UTR
AAGTCCTGCAATAGTGTCCT+TGG 0.515317 8_1:-17669304 None:intergenic
AAGTCCTGCAATAGTGTCCT+TGG 0.515317 8_1:-17671391 None:intergenic
CAAGAGTTGGTTGAGTCGTG+TGG 0.516337 8_1:-17671111 None:intergenic
GATTCTCAGGTAAGGATCAC+AGG 0.521205 8_1:-17669274 None:intergenic
AAGAAAGATGATTTAGTTTG+GGG 0.523463 8_1:+17672491 Msa1182530:three_prime_UTR
ATTCCGGTATAATAGGAAAG+TGG 0.526773 8_1:-17675109 None:intergenic
GTCTCTTATTAGAGAAGGAA+AGG 0.534026 8_1:+17676288 Msa1182530:three_prime_UTR
GCCATCAGGATTCTCAGATA+AGG 0.534182 8_1:-17671369 None:intergenic
ATAGCTGAGGGTCTTGAGAA+TGG 0.538619 8_1:+17676328 Msa1182530:three_prime_UTR
AAGTGCTGGAACTAAAGAAA+AGG 0.538814 8_1:+17675387 Msa1182530:three_prime_UTR
AGAAAAGTGATTAATGAAGA+AGG 0.540197 8_1:-17671153 None:intergenic
GACACTCCTAATCCTGTCAA+TGG 0.548059 8_1:-17672437 None:intergenic
CATGGCCGCATACCTGTAAG+TGG 0.550433 8_1:+17676127 Msa1182530:three_prime_UTR
CATATACTTTGAGAATGTTG+GGG 0.554022 8_1:+17676066 Msa1182530:three_prime_UTR
AGTTTGGGGAATGACTAAAT+GGG 0.554508 8_1:+17672505 Msa1182530:three_prime_UTR
TATAGGCCAATCAATGCAGC+AGG 0.558750 8_1:-17676352 None:intergenic
CCGGGAATGACTGCATATGC+TGG 0.559881 8_1:+17675247 Msa1182530:three_prime_UTR
TTCCGGTATAATAGGAAAGT+GGG 0.564227 8_1:-17675108 None:intergenic
GCCATCAGGATTCTCAGGTA+AGG 0.564370 8_1:-17669282 None:intergenic
ATGAATGAATGCTGATGCTA+TGG 0.565140 8_1:+17676428 Msa1182530:three_prime_UTR
TGTTTGAGTACAGGTATGCC+GGG 0.570748 8_1:+17675229 Msa1182530:intron
TCTGAGAATCCTGATGGCCA+AGG 0.573459 8_1:+17671374 Msa1182530:three_prime_UTR
AACTAAACCAATTCCAAACA+TGG 0.579023 8_1:+17671191 Msa1182530:three_prime_UTR
AAGGACACTATTGCAGGACT+TGG 0.579832 8_1:+17669306 Msa1182530:CDS
AAGGACACTATTGCAGGACT+TGG 0.579832 8_1:+17671393 Msa1182530:three_prime_UTR
GATTCTCAGATAAGGATCAC+AGG 0.585432 8_1:-17671361 None:intergenic
AAGAGTTGGTTGAGTCGTGT+GGG 0.588083 8_1:-17671110 None:intergenic
CCTGAGAATCCTGATGGCCA+AGG 0.590391 8_1:+17669287 Msa1182530:CDS
TAAATTAGGTACTTTCCAGA+AGG 0.591735 8_1:+17676037 Msa1182530:intron
GACACAAATGTGTCAAGAGT+TGG 0.600184 8_1:-17671124 None:intergenic
GGTCAATTTGCAAAATTGCA+TGG 0.604788 8_1:+17675349 Msa1182530:three_prime_UTR
ACAACATCATTGGAACCTTG+TGG 0.608276 8_1:-17669228 None:intergenic
ATAGCATGACATACAGAACC+AGG 0.609222 8_1:-17671426 None:intergenic
ATATAAGCGGATTCGAATCG+AGG 0.612171 8_1:+17676210 Msa1182530:three_prime_UTR
TGGCACAAATCATATATAAG+CGG 0.616296 8_1:+17676197 Msa1182530:three_prime_UTR
TCCTTATCTGAGAATCCTGA+TGG 0.619794 8_1:+17671368 Msa1182530:three_prime_UTR
TCCTTACCTGAGAATCCTGA+TGG 0.622090 8_1:+17669281 Msa1182530:CDS
TATAAGCGGATTCGAATCGA+GGG 0.623022 8_1:+17676211 Msa1182530:three_prime_UTR
AATCAACAGAGTGGATGAAG+AGG 0.625103 8_1:-17676535 None:intergenic
ACTACATCATTGGAACCTTG+TGG 0.625916 8_1:-17671315 None:intergenic
CATCATTGGAACCTTGTGGA+AGG 0.629559 8_1:-17669224 None:intergenic
GATAATTACAATCAACAGAG+TGG 0.635982 8_1:-17676544 None:intergenic
ATTACTCTCAAGCTTCCACA+AGG 0.648436 8_1:+17671300 Msa1182530:three_prime_UTR
TACAATCTTACTCAACCTGA+AGG 0.650544 8_1:+17676163 Msa1182530:three_prime_UTR
ATTACTCTCAACCTTCCACA+AGG 0.655246 8_1:+17669213 Msa1182530:CDS
GTGGATGAAGAGGTTTCCAA+AGG 0.659814 8_1:-17676525 None:intergenic
ATATACTTTGAGAATGTTGG+GGG 0.660703 8_1:+17676067 Msa1182530:three_prime_UTR
TCATTCCACTTACAGGTATG+CGG 0.669964 8_1:-17676132 None:intergenic
AGCATGACATACAGAACCAG+GGG 0.683293 8_1:-17671424 None:intergenic
TAGCATGACATACAGAACCA+GGG 0.696996 8_1:-17671425 None:intergenic
TCGCAATGTTGGCAAACAAG+TGG 0.698089 8_1:+17676381 Msa1182530:three_prime_UTR
TATACTTTGAGAATGTTGGG+GGG 0.706131 8_1:+17676068 Msa1182530:three_prime_UTR
GCATTGATTGGCCTATACAG+TGG 0.725348 8_1:+17676358 Msa1182530:three_prime_UTR
GTATGTGGAAGACATAGCTG+AGG 0.744288 8_1:+17676315 Msa1182530:three_prime_UTR
TATGTGGAAGACATAGCTGA+GGG 0.752621 8_1:+17676316 Msa1182530:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAAATTATAATTTTTTTT+TGG - chr8_1:17674250-17674269 None:intergenic 0.0%
!!! ATTATATATAAAATTGACTT+TGG + chr8_1:17669512-17669531 Msa1182530:intron 10.0%
!!! TTATATATAAAATTGACTTT+GGG + chr8_1:17669513-17669532 Msa1182530:intron 10.0%
!!! CAATATTATTTTTAACAAAT+CGG + chr8_1:17670826-17670845 Msa1182530:intron 10.0%
!! ATTATGTATAAAATTTACTT+TGG + chr8_1:17671586-17671605 Msa1182530:intron 10.0%
!! TTATGTATAAAATTTACTTT+GGG + chr8_1:17671587-17671606 Msa1182530:intron 10.0%
!! ATTTAGTTGAAAAATAAAAA+TGG + chr8_1:17674147-17674166 Msa1182530:intron 10.0%
!!! AAGTTTAAATTTTTTAACAA+TGG - chr8_1:17674341-17674360 None:intergenic 10.0%
!!! TAAAAAAATTCTTCAATTTT+TGG - chr8_1:17674410-17674429 None:intergenic 10.0%
!!! AAAATTGAAGAATTTTTTTA+AGG + chr8_1:17674410-17674429 Msa1182530:intron 10.0%
!!! AAATTGAAGAATTTTTTTAA+GGG + chr8_1:17674411-17674430 Msa1182530:intron 10.0%
!! TAAAAGTTGAAATTAAATTA+AGG + chr8_1:17674443-17674462 Msa1182530:intron 10.0%
!!! AAAAATACTATTTTCAATTT+TGG + chr8_1:17675595-17675614 Msa1182530:intron 10.0%
!!! AATTGATTTTAACATTTCAA+AGG + chr8_1:17669466-17669485 Msa1182530:intron 15.0%
!!! TTTTTTTTTGTTTGTAAACT+TGG - chr8_1:17669785-17669804 None:intergenic 15.0%
!!! TTAATTGCTTAAATAAGTTT+TGG - chr8_1:17670620-17670639 None:intergenic 15.0%
!! CAATTAAGAGAATAATTAAT+TGG + chr8_1:17670633-17670652 Msa1182530:intron 15.0%
!! AATTGAATTTAACATTTCAA+AGG + chr8_1:17671540-17671559 Msa1182530:intron 15.0%
!!! ATACTTTGTCTTTTAAAATT+AGG - chr8_1:17671566-17671585 None:intergenic 15.0%
!!! TTTTTTTTTGTTTGTAAACT+TGG - chr8_1:17669785-17669804 None:intergenic 15.0%
!! TATTCATTTAGTATAATTAC+AGG - chr8_1:17673127-17673146 None:intergenic 15.0%
!!! GATTTGTTGAAAAATAAATT+TGG + chr8_1:17673167-17673186 Msa1182530:intron 15.0%
!!! CTATGAATTTTCATTTTTTT+GGG - chr8_1:17674309-17674328 None:intergenic 15.0%
!!! ACTATGAATTTTCATTTTTT+TGG - chr8_1:17674310-17674329 None:intergenic 15.0%
!!! AAAAATTTAAACTTTTGCAA+AGG + chr8_1:17674347-17674366 Msa1182530:intron 15.0%
!!! AATTGAAGAATTTTTTTAAG+GGG + chr8_1:17674412-17674431 Msa1182530:intron 15.0%
!!! ATTAAATTAAGGAACAATTT+TGG + chr8_1:17674454-17674473 Msa1182530:intron 15.0%
!!! AAAATCATAGGTTTTTTTTA+GGG - chr8_1:17675469-17675488 None:intergenic 15.0%
!!! AAAAATCATAGGTTTTTTTT+AGG - chr8_1:17675470-17675489 None:intergenic 15.0%
!! GATATCAATTTATGTAAATT+AGG + chr8_1:17676023-17676042 Msa1182530:intron 15.0%
!! AAAAACTTGAAAGAAAAAAA+AGG - chr8_1:17676466-17676485 None:intergenic 15.0%
!!! ATACTTTGTCTTTTAAAATC+AGG - chr8_1:17669492-17669511 None:intergenic 20.0%
!! AATATCAAGGCTATAAATAA+TGG + chr8_1:17670074-17670093 Msa1182530:intron 20.0%
!! TTTGCAAAATTCATGAAAAA+GGG - chr8_1:17670218-17670237 None:intergenic 20.0%
!! ATTTGCAAAATTCATGAAAA+AGG - chr8_1:17670219-17670238 None:intergenic 20.0%
!!! GAATTTGAACAAGTATTTTT+AGG + chr8_1:17670472-17670491 Msa1182530:intron 20.0%
!!! TATTTTTAGGTCCAAAATTA+AGG + chr8_1:17670485-17670504 Msa1182530:intron 20.0%
!! AATGGAATTAAATTAGCAAT+AGG - chr8_1:17670531-17670550 None:intergenic 20.0%
!! ATATTGTTGGATTAAATGAA+TGG - chr8_1:17670854-17670873 None:intergenic 20.0%
!! TTGTCTAAACAAATTTCTAT+TGG - chr8_1:17671006-17671025 None:intergenic 20.0%
!! ATTTGTACATCAAATAAAAC+TGG - chr8_1:17671049-17671068 None:intergenic 20.0%
!! AATATCAAGGCTATAAATAA+TGG + chr8_1:17670074-17670093 Msa1182530:intron 20.0%
!! AAAGTTAGTTATAATGTGTA+TGG - chr8_1:17672300-17672319 None:intergenic 20.0%
!! CATTATAGTTACTTAGTTTA+TGG - chr8_1:17672342-17672361 None:intergenic 20.0%
!! AAGTAACTATAATGAAGTTA+TGG + chr8_1:17672348-17672367 Msa1182530:intron 20.0%
!! AAATCATCTTTCTTATAATC+TGG - chr8_1:17672485-17672504 None:intergenic 20.0%
!! ATAAGAAAGATGATTTAGTT+TGG + chr8_1:17672489-17672508 Msa1182530:three_prime_UTR 20.0%
!!! TAAGAAAGATGATTTAGTTT+GGG + chr8_1:17672490-17672509 Msa1182530:three_prime_UTR 20.0%
!! ACATTTGATTAATCATTCTA+CGG + chr8_1:17672956-17672975 Msa1182530:intron 20.0%
!!! CTATTTTAAATTTTGGAAAC+CGG + chr8_1:17673081-17673100 Msa1182530:intron 20.0%
!! TTAGTATAATTACAGGATAA+TGG - chr8_1:17673120-17673139 None:intergenic 20.0%
!! CATACACACAAATAATAATT+TGG - chr8_1:17673438-17673457 None:intergenic 20.0%
!! ATTATTATTTGTGTGTATGT+AGG + chr8_1:17673439-17673458 Msa1182530:intron 20.0%
!! TCATCTTTATACAAAATTCT+TGG + chr8_1:17673757-17673776 Msa1182530:intron 20.0%
!!! TGTTTTAAACATAACTTTTG+AGG + chr8_1:17674382-17674401 Msa1182530:intron 20.0%
!!! GTTTTAAACATAACTTTTGA+GGG + chr8_1:17674383-17674402 Msa1182530:intron 20.0%
!! AAATCATCTTTCTTATAATC+TGG - chr8_1:17672485-17672504 None:intergenic 20.0%
!! ATAAGAAAGATGATTTAGTT+TGG + chr8_1:17672489-17672508 Msa1182530:three_prime_UTR 20.0%
!!! TGATAATTCATCATTTTTAC+AGG - chr8_1:17675441-17675460 None:intergenic 20.0%
!!! AAATCATAGGTTTTTTTTAG+GGG - chr8_1:17675468-17675487 None:intergenic 20.0%
!! ACAGTAGAATAAAAAATCAT+AGG - chr8_1:17675481-17675500 None:intergenic 20.0%
!!! GTCTGTTATTAACATTTTTA+TGG + chr8_1:17675740-17675759 Msa1182530:intron 20.0%
!! TATTCATGAATAGTTTGTCT+TGG + chr8_1:17669378-17669397 Msa1182530:intron 25.0%
!!! TTGTTGTTGCTTTTGAAATT+AGG + chr8_1:17669413-17669432 Msa1182530:intron 25.0%
! CAATAAAGTTTGATTAGTGT+GGG - chr8_1:17669573-17669592 None:intergenic 25.0%
! TGTAATCTGTTTAGAGAAAA+TGG - chr8_1:17669831-17669850 None:intergenic 25.0%
! ATTATTTAATGACCCAAGAA+AGG + chr8_1:17669916-17669935 Msa1182530:intron 25.0%
! ATCATAATCTTTACCTACTT+GGG - chr8_1:17669960-17669979 None:intergenic 25.0%
! AGTTGCATTAGATAATATAG+AGG + chr8_1:17669985-17670004 Msa1182530:intron 25.0%
!! AAAGACACAAACAATTTTCA+AGG + chr8_1:17670155-17670174 Msa1182530:intron 25.0%
! TTCAAGGACTAAAATGAATT+TGG + chr8_1:17670171-17670190 Msa1182530:intron 25.0%
!! ATAGCATTGAAATAAAATGC+AGG + chr8_1:17670237-17670256 Msa1182530:intron 25.0%
!! TAGCATTGAAATAAAATGCA+GGG + chr8_1:17670238-17670257 Msa1182530:intron 25.0%
! TCCAAAATTAAGGTATAACA+GGG + chr8_1:17670495-17670514 Msa1182530:intron 25.0%
! ATTAATTAGTAGATGATGCA+TGG - chr8_1:17670565-17670584 None:intergenic 25.0%
! AGAAAAGTGATTAATGAAGA+AGG - chr8_1:17671156-17671175 None:intergenic 25.0%
!!! TTGTTGTTGCTTTTGAAATT+AGG + chr8_1:17669413-17669432 Msa1182530:intron 25.0%
! TGTAATCTGTTTAGAGAAAA+TGG - chr8_1:17669831-17669850 None:intergenic 25.0%
! ATTATTTAATGACCCAAGAA+AGG + chr8_1:17669916-17669935 Msa1182530:intron 25.0%
! ATCATAATCTTTACCTACTT+GGG - chr8_1:17669960-17669979 None:intergenic 25.0%
! AGTTGCATTAGATAATATAG+AGG + chr8_1:17669985-17670004 Msa1182530:intron 25.0%
!! AAGGAGAAATTACTCTAAAA+AGG - chr8_1:17672251-17672270 None:intergenic 25.0%
!!! AAGAAAGATGATTTAGTTTG+GGG + chr8_1:17672491-17672510 Msa1182530:three_prime_UTR 25.0%
! TGTTAATTCATCATTTATGC+AGG - chr8_1:17672933-17672952 None:intergenic 25.0%
! TAATGGTTGTAATTATGTAC+CGG - chr8_1:17673103-17673122 None:intergenic 25.0%
! TTTCTCTTCTTTGTAGTTAA+AGG - chr8_1:17673204-17673223 None:intergenic 25.0%
! CTTCATAGATAGTTATTACT+TGG + chr8_1:17673475-17673494 Msa1182530:intron 25.0%
!! ATATCATATATAAGCGGATT+CGG + chr8_1:17673705-17673724 Msa1182530:intron 25.0%
! GATAATTACAATCAACAGAA+TGG - chr8_1:17674050-17674069 None:intergenic 25.0%
! TGTCAAAAAACACAACAAAA+TGG - chr8_1:17675196-17675215 None:intergenic 25.0%
!!! TAAACATTCTCTCCTTTTTT+AGG - chr8_1:17675292-17675311 None:intergenic 25.0%
! GAATCATCTTTCTTATAATC+TGG + chr8_1:17675626-17675645 Msa1182530:intron 25.0%
! GATCTCTTGAAGAATAAATT+TGG + chr8_1:17675660-17675679 Msa1182530:three_prime_UTR 25.0%
!! ACATATACTTTGAGAATGTT+GGG + chr8_1:17676065-17676084 Msa1182530:three_prime_UTR 25.0%
! TCACCTTTATACAAAATTCT+TGG + chr8_1:17676255-17676274 Msa1182530:three_prime_UTR 25.0%
!! ACTCCAAGAATTTTGTATAA+AGG - chr8_1:17673763-17673782 None:intergenic 25.0%
!! AGTTTTCATCCTCATATTTT+TGG + chr8_1:17676601-17676620 Msa1182530:three_prime_UTR 25.0%
! AGTGAATTTCCAAAAATATG+AGG - chr8_1:17676613-17676632 None:intergenic 25.0%
TTTGAGAAGAACAACATCAT+TGG - chr8_1:17669241-17669260 None:intergenic 30.0%
!! TAGTTTGTCTTGGATTTTGA+AGG + chr8_1:17669388-17669407 Msa1182530:intron 30.0%
! AGTTTGTCTTGGATTTTGAA+GGG + chr8_1:17669389-17669408 Msa1182530:intron 30.0%
!!! TTGCTTTTGAAATTAGGAAG+TGG + chr8_1:17669419-17669438 Msa1182530:intron 30.0%
!!! TGCTTTTGAAATTAGGAAGT+GGG + chr8_1:17669420-17669439 Msa1182530:intron 30.0%
GCAATAAAGTTTGATTAGTG+TGG - chr8_1:17669574-17669593 None:intergenic 30.0%
TTGTTTGTAAACTTGGTATC+CGG - chr8_1:17669778-17669797 None:intergenic 30.0%
TATTATCTTGAGCCTTTCTT+GGG - chr8_1:17669931-17669950 None:intergenic 30.0%
CATCATAATCTTTACCTACT+TGG - chr8_1:17669961-17669980 None:intergenic 30.0%
GTGAAGTTGTTAGAATATCA+AGG + chr8_1:17670061-17670080 Msa1182530:intron 30.0%
ACTAAAATGAATTTGGATGC+AGG + chr8_1:17670178-17670197 Msa1182530:intron 30.0%
! GAAATGCAAGAAAGATGTTT+TGG + chr8_1:17670298-17670317 Msa1182530:intron 30.0%
ACTTGAAATGCAAGAAAACA+TGG + chr8_1:17670324-17670343 Msa1182530:intron 30.0%
CAGTGTGAATAATAGCAAAT+TGG + chr8_1:17670408-17670427 Msa1182530:intron 30.0%
GTCCAAAATTAAGGTATAAC+AGG + chr8_1:17670494-17670513 Msa1182530:intron 30.0%
! ACCCTGTTATACCTTAATTT+TGG - chr8_1:17670499-17670518 None:intergenic 30.0%
AGAGAAGAATCAATGGAATA+GGG + chr8_1:17670662-17670681 Msa1182530:intron 30.0%
! CAAAAAATAGGTGGATTCTA+AGG - chr8_1:17670919-17670938 None:intergenic 30.0%
TAACTTCCACGTCAAAAAAT+AGG - chr8_1:17670931-17670950 None:intergenic 30.0%
AACTAAACCAATTCCAAACA+TGG + chr8_1:17671191-17671210 Msa1182530:three_prime_UTR 30.0%
! CATTCATGAATAGTTTGTCT+TGG + chr8_1:17671465-17671484 Msa1182530:intron 30.0%
!! TAGTTTGTCTTGGATTTTGA+AGG + chr8_1:17669388-17669407 Msa1182530:intron 30.0%
!!! TTGCTTTTGAAATTAGGAAG+TGG + chr8_1:17669419-17669438 Msa1182530:intron 30.0%
!!! TGCTTTTGAAATTAGGAAGT+GGG + chr8_1:17669420-17669439 Msa1182530:intron 30.0%
GCAATAATGTTTGATTAGTG+TGG - chr8_1:17671647-17671666 None:intergenic 30.0%
TTGTTTGTAAACTTGGTATC+CGG - chr8_1:17669778-17669797 None:intergenic 30.0%
TATTATCTTGAGCCTTTCTT+GGG - chr8_1:17669931-17669950 None:intergenic 30.0%
CATCATAATCTTTACCTACT+TGG - chr8_1:17669961-17669980 None:intergenic 30.0%
GTGAAGTTGTTAGAATATCA+AGG + chr8_1:17670061-17670080 Msa1182530:intron 30.0%
! TAAATGGGAAGAGTATAGTT+TGG + chr8_1:17672520-17672539 Msa1182530:intron 30.0%
!! TGAAAAGTATTTCAGTTGCA+GGG - chr8_1:17672547-17672566 None:intergenic 30.0%
!! TTGAAAAGTATTTCAGTTGC+AGG - chr8_1:17672548-17672567 None:intergenic 30.0%
!! TTGTGTTTTTGTTTGAGTAC+AGG + chr8_1:17672694-17672713 Msa1182530:intron 30.0%
GAATATAATTATGACACACC+AGG + chr8_1:17673142-17673161 Msa1182530:intron 30.0%
!! TATTTTTCAACAAATCCACC+TGG - chr8_1:17673163-17673182 None:intergenic 30.0%
!!! GTCTGTTTCTAACAGTTTTA+TGG + chr8_1:17673247-17673266 Msa1182530:intron 30.0%
!! GAATATAAAGTGTTGATGCT+AGG - chr8_1:17673318-17673337 None:intergenic 30.0%
GCATCAACACTTTATATTCA+AGG + chr8_1:17673319-17673338 Msa1182530:intron 30.0%
TAAACTAGATACTTTCCAGA+AGG + chr8_1:17673539-17673558 Msa1182530:intron 30.0%
TCTTGAATATGAAACTCCAT+GGG + chr8_1:17673612-17673631 Msa1182530:intron 30.0%
TGGCACATATCATATATAAG+CGG + chr8_1:17673699-17673718 Msa1182530:intron 30.0%
GTATTGTCTCTTATAAGAGA+AGG + chr8_1:17673785-17673804 Msa1182530:intron 30.0%
AAGAATGAATGGAAATGCTT+TGG + chr8_1:17673926-17673945 Msa1182530:intron 30.0%
TAAATGTACAAACCAATGTG+TGG + chr8_1:17674504-17674523 Msa1182530:intron 30.0%
TTGTGTCACAAAAATCTTTG+TGG - chr8_1:17674565-17674584 None:intergenic 30.0%
ATGTTCATGTCTGATTCTTT+AGG - chr8_1:17674650-17674669 None:intergenic 30.0%
AACATAGTTGCAATTGATCA+AGG + chr8_1:17674869-17674888 Msa1182530:intron 30.0%
! TAGTTTGGAGTCTTACTAAA+TGG + chr8_1:17675029-17675048 Msa1182530:intron 30.0%
! AGTTTGGAGTCTTACTAAAT+GGG + chr8_1:17675030-17675049 Msa1182530:intron 30.0%
! TAAATGGGAAGAGTATAGTT+TGG + chr8_1:17672520-17672539 Msa1182530:intron 30.0%
! ATTTTGAACATTCCAGTTGT+AGG - chr8_1:17675073-17675092 None:intergenic 30.0%
AGCATATATACCAAGAATTC+CGG - chr8_1:17675128-17675147 None:intergenic 30.0%
!! TATGCTGGTTTCTTTGAATT+AGG + chr8_1:17675262-17675281 Msa1182530:three_prime_UTR 30.0%
TGGTTCTTCTTTGTAGTTAA+AGG - chr8_1:17675697-17675716 None:intergenic 30.0%
CTATGTATCAGTGTTAGTAT+CGG + chr8_1:17675928-17675947 Msa1182530:intron 30.0%
TAAATTAGGTACTTTCCAGA+AGG + chr8_1:17676037-17676056 Msa1182530:intron 30.0%
! GACATATACTTTGAGAATGT+TGG + chr8_1:17676064-17676083 Msa1182530:three_prime_UTR 30.0%
! CATATACTTTGAGAATGTTG+GGG + chr8_1:17676066-17676085 Msa1182530:three_prime_UTR 30.0%
! ATATACTTTGAGAATGTTGG+GGG + chr8_1:17676067-17676086 Msa1182530:three_prime_UTR 30.0%
TGGCACAAATCATATATAAG+CGG + chr8_1:17676197-17676216 Msa1182530:three_prime_UTR 30.0%
GATAATTACAATCAACAGAG+TGG - chr8_1:17676547-17676566 None:intergenic 30.0%
!! ATTTTGAGAGACTATGTGTC+TGG + chr8_1:17669150-17669169 Msa1182530:CDS 35.0%
!!! GCTTTTGAAATTAGGAAGTG+GGG + chr8_1:17669421-17669440 Msa1182530:intron 35.0%
AACTTTATTGCTAACCCACT+TGG + chr8_1:17669583-17669602 Msa1182530:intron 35.0%
ACTTTATTGCTAACCCACTT+GGG + chr8_1:17669584-17669603 Msa1182530:intron 35.0%
GTTAAGAGAAGCAAACTCTA+AGG - chr8_1:17669634-17669653 None:intergenic 35.0%
GCTTAAGACCAACTAATCTA+AGG - chr8_1:17669756-17669775 None:intergenic 35.0%
!! TAGATTAGTTGGTCTTAAGC+CGG + chr8_1:17669756-17669775 Msa1182530:intron 35.0%
CTATTATCTTGAGCCTTTCT+TGG - chr8_1:17669932-17669951 None:intergenic 35.0%
GATAATAGAATAGCCCAAGT+AGG + chr8_1:17669944-17669963 Msa1182530:intron 35.0%
!! CTAGATCCTTCTAAAACATG+AGG - chr8_1:17670016-17670035 None:intergenic 35.0%
GAGAGAAGAATCAATGGAAT+AGG + chr8_1:17670661-17670680 Msa1182530:intron 35.0%
! ACCCTTCATTTTCCTCATAT+CGG - chr8_1:17670724-17670743 None:intergenic 35.0%
ATCCAACAATATTTCCTTCG+TGG + chr8_1:17670862-17670881 Msa1182530:intron 35.0%
!!! AATCCACCTATTTTTTGACG+TGG + chr8_1:17670922-17670941 Msa1182530:intron 35.0%
CAAATATGCACAACAATGTG+TGG + chr8_1:17671023-17671042 Msa1182530:intron 35.0%
!! ATTTTGAGAGACTATGTGTC+TGG + chr8_1:17669150-17669169 Msa1182530:CDS 35.0%
ACGTTCATGTCTGATTCTAT+AGG - chr8_1:17671267-17671286 None:intergenic 35.0%
TTTGAGCAGAACTACATCAT+TGG - chr8_1:17671328-17671347 None:intergenic 35.0%
!!! GCTTTTGAAATTAGGAAGTG+GGG + chr8_1:17669421-17669440 Msa1182530:intron 35.0%
AACATTATTGCTAACCCACT+TGG + chr8_1:17671656-17671675 Msa1182530:intron 35.0%
ACATTATTGCTAACCCACTT+GGG + chr8_1:17671657-17671676 Msa1182530:intron 35.0%
GTTAAGAGAAGCAAACTCTA+AGG - chr8_1:17669634-17669653 None:intergenic 35.0%
GCTTAAGACCAACTAATCTA+AGG - chr8_1:17669756-17669775 None:intergenic 35.0%
!! TAGATTAGTTGGTCTTAAGC+CGG + chr8_1:17669756-17669775 Msa1182530:intron 35.0%
CTATTATCTTGAGCCTTTCT+TGG - chr8_1:17669932-17669951 None:intergenic 35.0%
GATAATAGAATAGCCCAAGT+AGG + chr8_1:17669944-17669963 Msa1182530:intron 35.0%
!! CTAGATCCTTCTAAAACATG+AGG - chr8_1:17670016-17670035 None:intergenic 35.0%
AGTAATTTCTCCTTCCTTGT+AGG + chr8_1:17672257-17672276 Msa1182530:intron 35.0%
!! TATGGTTACAGTTTGTTGAC+TGG + chr8_1:17672366-17672385 Msa1182530:intron 35.0%
!! ATGGTTACAGTTTGTTGACT+GGG + chr8_1:17672367-17672386 Msa1182530:intron 35.0%
! GTGTCTAAAGTTGTAGAATC+TGG + chr8_1:17672455-17672474 Msa1182530:three_prime_UTR 35.0%
TAGTTTGGGGAATGACTAAA+TGG + chr8_1:17672504-17672523 Msa1182530:three_prime_UTR 35.0%
AGTTTGGGGAATGACTAAAT+GGG + chr8_1:17672505-17672524 Msa1182530:three_prime_UTR 35.0%
ATTCCAGTATAGTAGGAAAG+CGG - chr8_1:17672590-17672609 None:intergenic 35.0%
TCCTACTATACTGGAATTCT+CGG + chr8_1:17672593-17672612 Msa1182530:intron 35.0%
TGTCATGAATCACAACGAAA+TGG - chr8_1:17672670-17672689 None:intergenic 35.0%
!! TATGCTGGTTTCTTTGAAGT+AGG + chr8_1:17672736-17672755 Msa1182530:intron 35.0%
AAAACTGTCTCTCCTTTCTT+AGG - chr8_1:17672766-17672785 None:intergenic 35.0%
AACCATGCAATTTGGCAAAT+TGG - chr8_1:17672828-17672847 None:intergenic 35.0%
AACATAGCAACCATGCAATT+TGG - chr8_1:17672836-17672855 None:intergenic 35.0%
! GGATAGTGGTTATTGTAGTT+AGG - chr8_1:17673008-17673027 None:intergenic 35.0%
TATAATTATGACACACCAGG+TGG + chr8_1:17673145-17673164 Msa1182530:intron 35.0%
! GACATTTACTTTGAGAACGT+TGG + chr8_1:17673566-17673585 Msa1182530:intron 35.0%
! ATTTACTTTGAGAACGTTGG+AGG + chr8_1:17673569-17673588 Msa1182530:intron 35.0%
CTCTTGAATATGAAACTCCA+TGG + chr8_1:17673611-17673630 Msa1182530:intron 35.0%
TACAATCTTACTCAACCTGA+AGG + chr8_1:17673665-17673684 Msa1182530:intron 35.0%
GTCTCTTATAAGAGAAGGAA+AGG + chr8_1:17673790-17673809 Msa1182530:intron 35.0%
CTGTTTAGTGGTCAAAATGT+TGG + chr8_1:17673872-17673891 Msa1182530:intron 35.0%
CTCATGAGTGAAAGAATGAA+TGG + chr8_1:17673915-17673934 Msa1182530:intron 35.0%
TGTGTTTAGTTACTTGTGCA+TGG + chr8_1:17673989-17674008 Msa1182530:intron 35.0%
AATCAACAGAATGGATGAAG+AGG - chr8_1:17674041-17674060 None:intergenic 35.0%
GAACAAGCAAGTGATTCTAA+AGG + chr8_1:17674607-17674626 Msa1182530:intron 35.0%
! ATTCTAAAGGACTATGTGTC+TGG + chr8_1:17674620-17674639 Msa1182530:intron 35.0%
AATTGATGAAAGAGAGAGCA+TGG - chr8_1:17674826-17674845 None:intergenic 35.0%
! GTGTCTAAAGTTGTAGAATC+TGG + chr8_1:17672455-17672474 Msa1182530:three_prime_UTR 35.0%
! TATAGTTTGGTTCCTACAAC+TGG + chr8_1:17675058-17675077 Msa1182530:three_prime_UTR 35.0%
TTCCGGTATAATAGGAAAGT+GGG - chr8_1:17675111-17675130 None:intergenic 35.0%
ATTCCGGTATAATAGGAAAG+TGG - chr8_1:17675112-17675131 None:intergenic 35.0%
TCCTATTATACCGGAATTCT+TGG + chr8_1:17675115-17675134 Msa1182530:three_prime_UTR 35.0%
ACCAAGAATTCCGGTATAAT+AGG - chr8_1:17675119-17675138 None:intergenic 35.0%
!! TTACGCTTTTGTTTGAGTAC+AGG + chr8_1:17675220-17675239 Msa1182530:intron 35.0%
GAATTAGGCAGTCCTAAAAA+AGG + chr8_1:17675277-17675296 Msa1182530:three_prime_UTR 35.0%
GGTCAATTTGCAAAATTGCA+TGG + chr8_1:17675349-17675368 Msa1182530:three_prime_UTR 35.0%
TTGCATGGTTGTTATGTTGT+TGG + chr8_1:17675364-17675383 Msa1182530:three_prime_UTR 35.0%
!! AAGTGCTGGAACTAAAGAAA+AGG + chr8_1:17675387-17675406 Msa1182530:three_prime_UTR 35.0%
GGATTGTGGTTATTGCAATT+AGG - chr8_1:17675529-17675548 None:intergenic 35.0%
TTCTTATAATCTGGCACACT+AGG + chr8_1:17675635-17675654 Msa1182530:intron 35.0%
!! ACCTCAATGCAGCTTTAAAA+AGG + chr8_1:17675718-17675737 Msa1182530:three_prime_UTR 35.0%
!!! ACCTTTTTAAAGCTGCATTG+AGG - chr8_1:17675722-17675741 None:intergenic 35.0%
!! ATAAAGTGTCGATGCTACAT+AGG - chr8_1:17675808-17675827 None:intergenic 35.0%
! GCATCGACACTTTATATTGA+AGG + chr8_1:17675813-17675832 Msa1182530:intron 35.0%
CATAGACACAGGCAATAATT+TGG - chr8_1:17675913-17675932 None:intergenic 35.0%
TAACACTGATACATAGACAC+AGG - chr8_1:17675924-17675943 None:intergenic 35.0%
AAGTATATGTCAATGCCTTC+TGG - chr8_1:17676055-17676074 None:intergenic 35.0%
! TATACTTTGAGAATGTTGGG+GGG + chr8_1:17676068-17676087 Msa1182530:three_prime_UTR 35.0%
! CTTTTGAATATGAGAGTCCA+TGG + chr8_1:17676109-17676128 Msa1182530:three_prime_UTR 35.0%
TACAATCTTACTCAACCTGA+AGG + chr8_1:17673665-17673684 Msa1182530:intron 35.0%
TTCCTTCTCTAATAAGAGAC+AGG - chr8_1:17676288-17676307 None:intergenic 35.0%
GTCTCTTATTAGAGAAGGAA+AGG + chr8_1:17676288-17676307 Msa1182530:three_prime_UTR 35.0%
ATGAATGAATGCTGATGCTA+TGG + chr8_1:17676428-17676447 Msa1182530:three_prime_UTR 35.0%
! CTTGTGTATGAAGCATTCTT+TGG + chr8_1:17676498-17676517 Msa1182530:three_prime_UTR 35.0%
!!! CTATGTGTCTGGTTTTCCTA+AGG + chr8_1:17669161-17669180 Msa1182530:CDS 40.0%
ACGTTCATGTCTGATTCCTT+AGG - chr8_1:17669180-17669199 None:intergenic 40.0%
ATTACTCTCAACCTTCCACA+AGG + chr8_1:17669213-17669232 Msa1182530:CDS 40.0%
ACAACATCATTGGAACCTTG+TGG - chr8_1:17669231-17669250 None:intergenic 40.0%
TAGCATGACATACAGAACCA+GGG - chr8_1:17669341-17669360 None:intergenic 40.0%
ATAGCATGACATACAGAACC+AGG - chr8_1:17669342-17669361 None:intergenic 40.0%
TCTTAACGTTTCGATTCCCT+CGG + chr8_1:17669647-17669666 Msa1182530:intron 40.0%
GTTGGACTCCTTAGATTAGT+TGG + chr8_1:17669745-17669764 Msa1182530:intron 40.0%
!! GTGAGTCCTCATGTTTTAGA+AGG + chr8_1:17670007-17670026 Msa1182530:intron 40.0%
CACCTACGACTCATCATAAT+GGG - chr8_1:17670044-17670063 None:intergenic 40.0%
TCACCTACGACTCATCATAA+TGG - chr8_1:17670045-17670064 None:intergenic 40.0%
GACAGAGAGAGAAGAATCAA+TGG + chr8_1:17670655-17670674 Msa1182530:intron 40.0%
GCCGATATGAGGAAAATGAA+GGG + chr8_1:17670720-17670739 Msa1182530:intron 40.0%
ATGAGGAAAATGAAGGGTGA+AGG + chr8_1:17670726-17670745 Msa1182530:intron 40.0%
AAATGAAGGGTGAAGGTTGA+TGG + chr8_1:17670733-17670752 Msa1182530:intron 40.0%
CTTGACAGGAGGAAGAAAAA+GGG + chr8_1:17670759-17670778 Msa1182530:intron 40.0%
TTGACAGGAGGAAGAAAAAG+GGG + chr8_1:17670760-17670779 Msa1182530:intron 40.0%
GACCACGAAGGAAATATTGT+TGG - chr8_1:17670867-17670886 None:intergenic 40.0%
!! ATAGGTGGATTCTAAGGTGA+GGG - chr8_1:17670913-17670932 None:intergenic 40.0%
!! AATAGGTGGATTCTAAGGTG+AGG - chr8_1:17670914-17670933 None:intergenic 40.0%
CTTCCACGTCAAAAAATAGG+TGG - chr8_1:17670928-17670947 None:intergenic 40.0%
GACACAAATGTGTCAAGAGT+TGG - chr8_1:17671127-17671146 None:intergenic 40.0%
! ACTTGTGCCATGTTTGGAAT+TGG - chr8_1:17671201-17671220 None:intergenic 40.0%
TTTCTCACTTGTGCCATGTT+TGG - chr8_1:17671207-17671226 None:intergenic 40.0%
ATTACTCTCAAGCTTCCACA+AGG + chr8_1:17671300-17671319 Msa1182530:three_prime_UTR 40.0%
ACTACATCATTGGAACCTTG+TGG - chr8_1:17671318-17671337 None:intergenic 40.0%
GATTCTCAGATAAGGATCAC+AGG - chr8_1:17671364-17671383 None:intergenic 40.0%
TCCTTATCTGAGAATCCTGA+TGG + chr8_1:17671368-17671387 Msa1182530:three_prime_UTR 40.0%
TAGCATGACATACAGAACCA+GGG - chr8_1:17669341-17669360 None:intergenic 40.0%
ATAGCATGACATACAGAACC+AGG - chr8_1:17669342-17669361 None:intergenic 40.0%
TCTTAACGTTTCGATTCCCT+CGG + chr8_1:17669647-17669666 Msa1182530:intron 40.0%
GTTGGACTCCTTAGATTAGT+TGG + chr8_1:17669745-17669764 Msa1182530:intron 40.0%
!! GTGAGTCCTCATGTTTTAGA+AGG + chr8_1:17670007-17670026 Msa1182530:intron 40.0%
CACCTACGACTCATCATAAT+GGG - chr8_1:17670044-17670063 None:intergenic 40.0%
TCACCTACGACTCATCATAA+TGG - chr8_1:17670045-17670064 None:intergenic 40.0%
!! GTGTATGGTACCACTTTTGA+TGG - chr8_1:17672285-17672304 None:intergenic 40.0%
!! GGGCCAATATGTCACTTTAA+CGG + chr8_1:17672387-17672406 Msa1182530:intron 40.0%
CTGCCGTTAAAGTGACATAT+TGG - chr8_1:17672393-17672412 None:intergenic 40.0%
TTCCAGTATAGTAGGAAAGC+GGG - chr8_1:17672589-17672608 None:intergenic 40.0%
ACCGAGAATTCCAGTATAGT+AGG - chr8_1:17672597-17672616 None:intergenic 40.0%
TTGTTTGAGTACAGGTATGC+CGG + chr8_1:17672702-17672721 Msa1182530:intron 40.0%
!! GTTTTTGTTTCATCTGCCTC+TGG + chr8_1:17672781-17672800 Msa1182530:intron 40.0%
TTGCATGGTTGCTATGTTGT+TGG + chr8_1:17672838-17672857 Msa1182530:intron 40.0%
!! AAGTGCTGGAAGTAAAGAGA+AGG + chr8_1:17672861-17672880 Msa1182530:intron 40.0%
TCAACAAGTGAGCAAAGACT+TGG - chr8_1:17673029-17673048 None:intergenic 40.0%
! AAGTCTTTGCTCACTTGTTG+AGG + chr8_1:17673028-17673047 Msa1182530:intron 40.0%
CACATGTGACATTGTTGTGT+TGG - chr8_1:17673390-17673409 None:intergenic 40.0%
AAGTAAATGTCGATGCCTTC+TGG - chr8_1:17673557-17673576 None:intergenic 40.0%
!! ACCTGAAGGTGTCACAAATT+TGG + chr8_1:17673679-17673698 Msa1182530:intron 40.0%
! CATATATAAGCGGATTCGGA+TGG + chr8_1:17673709-17673728 Msa1182530:intron 40.0%
AGAAGGAAAGGTTGTGTATG+TGG + chr8_1:17673802-17673821 Msa1182530:intron 40.0%
TATGTGGAAGACATAGCTGA+GGG + chr8_1:17673818-17673837 Msa1182530:intron 40.0%
ATGGATGAAGAGGTTTCCAA+AGG - chr8_1:17674031-17674050 None:intergenic 40.0%
TAGTACAACTGACCACACAT+TGG - chr8_1:17674519-17674538 None:intergenic 40.0%
TTGTGACACAATTCCTGAGA+TGG + chr8_1:17674574-17674593 Msa1182530:intron 40.0%
TTGTGGAAGGTTGAGAGTTA+TGG - chr8_1:17674684-17674703 None:intergenic 40.0%
ATAACTCTCAACCTTCCACA+AGG + chr8_1:17674683-17674702 Msa1182530:intron 40.0%
TTTGAGCAGAACAACATCGT+TGG - chr8_1:17674711-17674730 None:intergenic 40.0%
GTCCCACTTTCCTATTATAC+CGG + chr8_1:17675106-17675125 Msa1182530:three_prime_UTR 40.0%
TTGTTTGAGTACAGGTATGC+CGG + chr8_1:17672702-17672721 Msa1182530:intron 40.0%
GTTTATGTTTCAGCTGCATC+TGG + chr8_1:17675307-17675326 Msa1182530:three_prime_UTR 40.0%
! TGTTATGTTGTTGGAAGTGC+TGG + chr8_1:17675373-17675392 Msa1182530:three_prime_UTR 40.0%
AATCCATGTCTTTGTTCGCT+TGG + chr8_1:17675544-17675563 Msa1182530:intron 40.0%
TTATAATCTGGCACACTAGG+TGG + chr8_1:17675638-17675657 Msa1182530:intron 40.0%
! TTTAAAGCTGCATTGAGGTC+TGG - chr8_1:17675717-17675736 None:intergenic 40.0%
TGTCAGACAGTAACATGTGT+AGG - chr8_1:17675842-17675861 None:intergenic 40.0%
TCATTCCACTTACAGGTATG+CGG - chr8_1:17676135-17676154 None:intergenic 40.0%
TGTGAGATCATTCCACTTAC+AGG - chr8_1:17676142-17676161 None:intergenic 40.0%
!! ACCTGAAGGTGTCACAAATT+TGG + chr8_1:17673679-17673698 Msa1182530:intron 40.0%
! ATATAAGCGGATTCGAATCG+AGG + chr8_1:17676210-17676229 Msa1182530:three_prime_UTR 40.0%
! TATAAGCGGATTCGAATCGA+GGG + chr8_1:17676211-17676230 Msa1182530:three_prime_UTR 40.0%
GTCCTGTCTCTTATTAGAGA+AGG + chr8_1:17676283-17676302 Msa1182530:three_prime_UTR 40.0%
AGAAGGAAAGGTTGTGTATG+TGG + chr8_1:17673802-17673821 Msa1182530:intron 40.0%
TATGTGGAAGACATAGCTGA+GGG + chr8_1:17673818-17673837 Msa1182530:intron 40.0%
AGCATTCTTTGGATGACCTT+TGG + chr8_1:17676509-17676528 Msa1182530:three_prime_UTR 40.0%
AATCAACAGAGTGGATGAAG+AGG - chr8_1:17676538-17676557 None:intergenic 40.0%
CATCATTGGAACCTTGTGGA+AGG - chr8_1:17669227-17669246 None:intergenic 45.0%
GATTCTCAGGTAAGGATCAC+AGG - chr8_1:17669277-17669296 None:intergenic 45.0%
TCCTTACCTGAGAATCCTGA+TGG + chr8_1:17669281-17669300 Msa1182530:CDS 45.0%
AAGTCCTGCAATAGTGTCCT+TGG - chr8_1:17669307-17669326 None:intergenic 45.0%
AAGGACACTATTGCAGGACT+TGG + chr8_1:17669306-17669325 Msa1182530:CDS 45.0%
AGCATGACATACAGAACCAG+GGG - chr8_1:17669340-17669359 None:intergenic 45.0%
TTGGGTTTCAGCTTAGAGCA+AGG + chr8_1:17669531-17669550 Msa1182530:intron 45.0%
TATTGCTAACCCACTTGGGT+TGG + chr8_1:17669588-17669607 Msa1182530:intron 45.0%
!! TTGGCATGTGTTGTTGGTTC+AGG + chr8_1:17669607-17669626 Msa1182530:intron 45.0%
!!! GATTCCCTCGGTGTCAATTT+TGG + chr8_1:17669659-17669678 Msa1182530:intron 45.0%
! GTCCATACATAGTCTTGCTC+TGG + chr8_1:17669689-17669708 Msa1182530:intron 45.0%
AGCCAGAGCAAGACTATGTA+TGG - chr8_1:17669694-17669713 None:intergenic 45.0%
CACCCATTATGATGAGTCGT+AGG + chr8_1:17670039-17670058 Msa1182530:intron 45.0%
TAGTAGATGATGCATGGCAG+TGG - chr8_1:17670559-17670578 None:intergenic 45.0%
AAAGAACCACACTCCCATGA+CGG + chr8_1:17670687-17670706 Msa1182530:intron 45.0%
CGCCGATATGAGGAAAATGA+AGG + chr8_1:17670719-17670738 Msa1182530:intron 45.0%
!! AAGGTTGATGGAAGCTTGAC+AGG + chr8_1:17670745-17670764 Msa1182530:intron 45.0%
GCTTGACAGGAGGAAGAAAA+AGG + chr8_1:17670758-17670777 Msa1182530:intron 45.0%
ATATTTCCTTCGTGGTCCAC+CGG + chr8_1:17670870-17670889 Msa1182530:intron 45.0%
! AAGAGTTGGTTGAGTCGTGT+GGG - chr8_1:17671113-17671132 None:intergenic 45.0%
GCCATCAGGATTCTCAGATA+AGG - chr8_1:17671372-17671391 None:intergenic 45.0%
AAGTCCTGCAATAGTGTCCT+TGG - chr8_1:17669307-17669326 None:intergenic 45.0%
AAGGACACTATTGCAGGACT+TGG + chr8_1:17669306-17669325 Msa1182530:CDS 45.0%
AGCATGACATACAGAACCAG+GGG - chr8_1:17669340-17669359 None:intergenic 45.0%
TATTGCTAACCCACTTGGGT+TGG + chr8_1:17669588-17669607 Msa1182530:intron 45.0%
!!! GATTCCCTCGGTGTCAATTT+TGG + chr8_1:17669659-17669678 Msa1182530:intron 45.0%
! GTCCATACATAGTCTTGCTC+TGG + chr8_1:17669689-17669708 Msa1182530:intron 45.0%
AGCCAGAGCAAGACTATGTA+TGG - chr8_1:17669694-17669713 None:intergenic 45.0%
CACCCATTATGATGAGTCGT+AGG + chr8_1:17670039-17670058 Msa1182530:intron 45.0%
! TTTGATGGCACCTACAAGGA+AGG - chr8_1:17672270-17672289 None:intergenic 45.0%
!! CACTTTTGATGGCACCTACA+AGG - chr8_1:17672274-17672293 None:intergenic 45.0%
! CTTGTAGGTGCCATCAAAAG+TGG + chr8_1:17672272-17672291 Msa1182530:intron 45.0%
GAGTAATTGCAGCCATTGAC+AGG + chr8_1:17672425-17672444 Msa1182530:intron 45.0%
TTGCAGCCATTGACAGGATT+AGG + chr8_1:17672431-17672450 Msa1182530:intron 45.0%
GACACTCCTAATCCTGTCAA+TGG - chr8_1:17672440-17672459 None:intergenic 45.0%
TGTTTGAGTACAGGTATGCC+GGG + chr8_1:17672703-17672722 Msa1182530:intron 45.0%
GAAGTAGGCTCTCCTAAGAA+AGG + chr8_1:17672751-17672770 Msa1182530:intron 45.0%
GGCCAATTTGCCAAATTGCA+TGG + chr8_1:17672823-17672842 Msa1182530:intron 45.0%
! TGCTATGTTGTTGGAAGTGC+TGG + chr8_1:17672847-17672866 Msa1182530:intron 45.0%
GTGAGCAAAGACTTGGATAG+TGG - chr8_1:17673022-17673041 None:intergenic 45.0%
!! ACCTCGATGCAGCTTTGAAA+AGG + chr8_1:17673225-17673244 Msa1182530:intron 45.0%
! ACCTTTTCAAAGCTGCATCG+AGG - chr8_1:17673229-17673248 None:intergenic 45.0%
! AAGGTGTTTCCAACACGTGT+TGG + chr8_1:17673338-17673357 Msa1182530:intron 45.0%
TGTCAGACACTAACACGTGT+CGG - chr8_1:17673367-17673386 None:intergenic 45.0%
TGTGAGATCATTCCACACAC+AGG - chr8_1:17673644-17673663 None:intergenic 45.0%
GCCAAATTTGTGACACCTTC+AGG - chr8_1:17673683-17673702 None:intergenic 45.0%
! TATAAGCGGATTCGGATGGA+AGG + chr8_1:17673713-17673732 Msa1182530:intron 45.0%
GTATGTGGAAGACATAGCTG+AGG + chr8_1:17673817-17673836 Msa1182530:intron 45.0%
ATAGCTGAGGGTCTTGAGAA+TGG + chr8_1:17673830-17673849 Msa1182530:intron 45.0%
!! GCTTTGGTTGGTCTGTTTAG+TGG + chr8_1:17673860-17673879 Msa1182530:intron 45.0%
AGCACTCTTTGGATGACCTT+TGG + chr8_1:17674012-17674031 Msa1182530:intron 45.0%
TGACACAATTCCTGAGATGG+CGG + chr8_1:17674577-17674596 Msa1182530:intron 45.0%
ACAACATCGTTGGAACCTTG+TGG - chr8_1:17674701-17674720 None:intergenic 45.0%
GTCATCAGGAGTCTCATGTA+AGG - chr8_1:17674755-17674774 None:intergenic 45.0%
TGTTTGAGTACAGGTATGCC+GGG + chr8_1:17672703-17672722 Msa1182530:intron 45.0%
! GCGAACAAAGACATGGATTG+TGG - chr8_1:17675543-17675562 None:intergenic 45.0%
TCACCAAGCGAACAAAGACA+TGG - chr8_1:17675550-17675569 None:intergenic 45.0%
TGCAAGTGACTGTGTTGTGA+TGG - chr8_1:17675865-17675884 None:intergenic 45.0%
GCCAAATTTGTGACACCTTC+AGG - chr8_1:17673683-17673702 None:intergenic 45.0%
GTATGTGGAAGACATAGCTG+AGG + chr8_1:17673817-17673836 Msa1182530:intron 45.0%
ATAGCTGAGGGTCTTGAGAA+TGG + chr8_1:17673830-17673849 Msa1182530:intron 45.0%
! AATGGTCCTGCTGCATTGAT+TGG + chr8_1:17676346-17676365 Msa1182530:three_prime_UTR 45.0%
TATAGGCCAATCAATGCAGC+AGG - chr8_1:17676355-17676374 None:intergenic 45.0%
!! GCATTGATTGGCCTATACAG+TGG + chr8_1:17676358-17676377 Msa1182530:three_prime_UTR 45.0%
CAACATTGCGACCACTGTAT+AGG - chr8_1:17676372-17676391 None:intergenic 45.0%
CTATACAGTGGTCGCAATGT+TGG + chr8_1:17676370-17676389 Msa1182530:three_prime_UTR 45.0%
TCGCAATGTTGGCAAACAAG+TGG + chr8_1:17676381-17676400 Msa1182530:three_prime_UTR 45.0%
GTGGATGAAGAGGTTTCCAA+AGG - chr8_1:17676528-17676547 None:intergenic 45.0%
!!! AAAAATACTATTTTAAATTT+TGG + chr8_1:17673074-17673093 Msa1182530:intron 5.0%
GCCATCAGGATTCTCAGGTA+AGG - chr8_1:17669285-17669304 None:intergenic 50.0%
CAATAGTGTCCTTGGCCATC+AGG - chr8_1:17669299-17669318 None:intergenic 50.0%
ATGGCCAAGGACACTATTGC+AGG + chr8_1:17669300-17669319 Msa1182530:CDS 50.0%
GACACTATTGCAGGACTTGG+TGG + chr8_1:17669309-17669328 Msa1182530:CDS 50.0%
CAACACATGCCAACCCAAGT+GGG - chr8_1:17669600-17669619 None:intergenic 50.0%
ACAACACATGCCAACCCAAG+TGG - chr8_1:17669601-17669620 None:intergenic 50.0%
!! CTTGGGTTGGCATGTGTTGT+TGG + chr8_1:17669601-17669620 Msa1182530:intron 50.0%
!!! TCCCTCGGTGTCAATTTTGG+TGG + chr8_1:17669662-17669681 Msa1182530:intron 50.0%
CCCACCAAAATTGACACCGA+GGG - chr8_1:17669666-17669685 None:intergenic 50.0%
!!! CCCTCGGTGTCAATTTTGGT+GGG + chr8_1:17669663-17669682 Msa1182530:intron 50.0%
! GTTGATGGAAGCTTGACAGG+AGG + chr8_1:17670748-17670767 Msa1182530:intron 50.0%
GGTCCAATTAAGTCCCTCAC+CGG - chr8_1:17670892-17670911 None:intergenic 50.0%
! CAAGAGTTGGTTGAGTCGTG+TGG - chr8_1:17671114-17671133 None:intergenic 50.0%
TCTGAGAATCCTGATGGCCA+AGG + chr8_1:17671374-17671393 Msa1182530:three_prime_UTR 50.0%
CAATAGTGTCCTTGGCCATC+AGG - chr8_1:17669299-17669318 None:intergenic 50.0%
ATGGCCAAGGACACTATTGC+AGG + chr8_1:17669300-17669319 Msa1182530:CDS 50.0%
GACACTATTGCAGGACTTGG+TGG + chr8_1:17669309-17669328 Msa1182530:CDS 50.0%
!! TTGGCATGTGGTGTTGGTTC+AGG + chr8_1:17671680-17671699 Msa1182530:intron 50.0%
!!! TCCCTCGGTGTCAATTTTGG+TGG + chr8_1:17669662-17669681 Msa1182530:intron 50.0%
CCCACCAAAATTGACACCGA+GGG - chr8_1:17669666-17669685 None:intergenic 50.0%
!!! CCCTCGGTGTCAATTTTGGT+GGG + chr8_1:17669663-17669682 Msa1182530:intron 50.0%
GTCCCGCTTTCCTACTATAC+TGG + chr8_1:17672584-17672603 Msa1182530:intron 50.0%
CCAGCATAAGCAGTCATTCC+CGG - chr8_1:17672724-17672743 None:intergenic 50.0%
AAGTTGACCAACAGCACCAG+AGG - chr8_1:17672800-17672819 None:intergenic 50.0%
!! GGTGCTGTTGGTCAACTTGT+TGG + chr8_1:17672802-17672821 Msa1182530:intron 50.0%
ACAGACCAACCAAAGCTGCA+GGG - chr8_1:17673856-17673875 None:intergenic 50.0%
AACAGACCAACCAAAGCTGC+AGG - chr8_1:17673857-17673876 None:intergenic 50.0%
! CTTGTGCATGGAGCACTCTT+TGG + chr8_1:17674001-17674020 Msa1182530:intron 50.0%
CATCGTTGGAACCTTGTGGA+AGG - chr8_1:17674697-17674716 None:intergenic 50.0%
CATGAGACTCCTGATGACCA+AGG + chr8_1:17674757-17674776 Msa1182530:intron 50.0%
CAGTAGTGTCCTTGGTCATC+AGG - chr8_1:17674769-17674788 None:intergenic 50.0%
ATGACCAAGGACACTACTGC+AGG + chr8_1:17674770-17674789 Msa1182530:intron 50.0%
AAGTCCTGCAGTAGTGTCCT+TGG - chr8_1:17674777-17674796 None:intergenic 50.0%
AAGGACACTACTGCAGGACT+TGG + chr8_1:17674776-17674795 Msa1182530:intron 50.0%
AGCATGGCATACAGAACCAG+GGG - chr8_1:17674810-17674829 None:intergenic 50.0%
GAGCATGGCATACAGAACCA+GGG - chr8_1:17674811-17674830 None:intergenic 50.0%
AGAGCATGGCATACAGAACC+AGG - chr8_1:17674812-17674831 None:intergenic 50.0%
GAGTAATTGCAGCCACTGAC+AGG + chr8_1:17674950-17674969 Msa1182530:intron 50.0%
! TTGCAGCCACTGACAGGTTT+TGG + chr8_1:17674956-17674975 Msa1182530:intron 50.0%
GACACTCCAAAACCTGTCAG+TGG - chr8_1:17674965-17674984 None:intergenic 50.0%
CCAGCATATGCAGTCATTCC+CGG - chr8_1:17675250-17675269 None:intergenic 50.0%
!! GGTGCTGTTGGTCAACTTGT+TGG + chr8_1:17672802-17672821 Msa1182530:intron 50.0%
CCTTGGCCATCAGGATTCTC+AGG - chr8_1:17669290-17669309 None:intergenic 55.0%
CCTGAGAATCCTGATGGCCA+AGG + chr8_1:17669287-17669306 Msa1182530:CDS 55.0%
GCCCACCAAAATTGACACCG+AGG - chr8_1:17669667-17669686 None:intergenic 55.0%
TTAAACGAGCCCCCTGCAAG+TGG + chr8_1:17669714-17669733 Msa1182530:intron 55.0%
AACCCCATCGTCCACTTGCA+GGG - chr8_1:17669728-17669747 None:intergenic 55.0%
CCAATTAAGTCCCTCACCGG+TGG - chr8_1:17670889-17670908 None:intergenic 55.0%
CCACCGGTGAGGGACTTAAT+TGG + chr8_1:17670886-17670905 Msa1182530:intron 55.0%
!! AACCCACTTGGGTTGGCATG+TGG + chr8_1:17669595-17669614 Msa1182530:intron 55.0%
CACCACATGCCAACCCAAGT+GGG - chr8_1:17671673-17671692 None:intergenic 55.0%
ACACCACATGCCAACCCAAG+TGG - chr8_1:17671674-17671693 None:intergenic 55.0%
!! CTTGGGTTGGCATGTGGTGT+TGG + chr8_1:17671674-17671693 Msa1182530:intron 55.0%
GCCCACCAAAATTGACACCG+AGG - chr8_1:17669667-17669686 None:intergenic 55.0%
TTAAACGAGCCCCCTGCAAG+TGG + chr8_1:17669714-17669733 Msa1182530:intron 55.0%
AACCCCATCGTCCACTTGCA+GGG - chr8_1:17669728-17669747 None:intergenic 55.0%
CCGGGAATGACTGCTTATGC+TGG + chr8_1:17672721-17672740 Msa1182530:intron 55.0%
!! TCATCTGCCTCTGGTGCTGT+TGG + chr8_1:17672790-17672809 Msa1182530:intron 55.0%
TGTCGGACACCAACACGTGT+TGG - chr8_1:17673350-17673369 None:intergenic 55.0%
TGAGAATGGCCCTGCAGCTT+TGG + chr8_1:17673844-17673863 Msa1182530:intron 55.0%
! AATGGCCCTGCAGCTTTGGT+TGG + chr8_1:17673848-17673867 Msa1182530:intron 55.0%
!! TTCCTGAGATGGCGGAAGTG+AGG + chr8_1:17674585-17674604 Msa1182530:intron 55.0%
TTCCTCACTTCCGCCATCTC+AGG - chr8_1:17674590-17674609 None:intergenic 55.0%
CCGGGAATGACTGCATATGC+TGG + chr8_1:17675247-17675266 Msa1182530:three_prime_UTR 55.0%
!! TCAGCTGCATCTGGTGCTGT+TGG + chr8_1:17675316-17675335 Msa1182530:three_prime_UTR 55.0%
CACTTACAGGTATGCGGCCA+TGG - chr8_1:17676129-17676148 None:intergenic 55.0%
CATGGCCGCATACCTGTAAG+TGG + chr8_1:17676127-17676146 Msa1182530:three_prime_UTR 55.0%
ACCCCATCGTCCACTTGCAG+GGG - chr8_1:17669727-17669746 None:intergenic 60.0%
CAACCCCATCGTCCACTTGC+AGG - chr8_1:17669729-17669748 None:intergenic 60.0%
CTGCAAGTGGACGATGGGGT+TGG + chr8_1:17669727-17669746 Msa1182530:intron 60.0%
TGCATGGCAGTGGCGTGGAA+TGG - chr8_1:17670549-17670568 None:intergenic 60.0%
GATGATGCATGGCAGTGGCG+TGG - chr8_1:17670554-17670573 None:intergenic 60.0%
GCGAGAGGTTCGCCGATATG+AGG + chr8_1:17670709-17670728 Msa1182530:intron 60.0%
ACCCCATCGTCCACTTGCAG+GGG - chr8_1:17669727-17669746 None:intergenic 60.0%
CAACCCCATCGTCCACTTGC+AGG - chr8_1:17669729-17669748 None:intergenic 60.0%
CTGCAAGTGGACGATGGGGT+TGG + chr8_1:17669727-17669746 Msa1182530:intron 60.0%
CACACACAGGTATGCGCCCA+TGG - chr8_1:17673631-17673650 None:intergenic 60.0%
CATGGGCGCATACCTGTGTG+TGG + chr8_1:17673629-17673648 Msa1182530:intron 60.0%
!! GGACTTGGTGGTCTCACCCC+TGG + chr8_1:17669321-17669340 Msa1182530:CDS 65.0%
AGCCCCCTGCAAGTGGACGA+TGG + chr8_1:17669721-17669740 Msa1182530:intron 65.0%
GCCCCCTGCAAGTGGACGAT+GGG + chr8_1:17669722-17669741 Msa1182530:intron 65.0%
CCCCATCGTCCACTTGCAGG+GGG - chr8_1:17669726-17669745 None:intergenic 65.0%
CCCCCTGCAAGTGGACGATG+GGG + chr8_1:17669723-17669742 Msa1182530:intron 65.0%
CTCTCGCCGTCATGGGAGTG+TGG - chr8_1:17670696-17670715 None:intergenic 65.0%
CACACTCCCATGACGGCGAG+AGG + chr8_1:17670694-17670713 Msa1182530:intron 65.0%
GGCGAACCTCTCGCCGTCAT+GGG - chr8_1:17670703-17670722 None:intergenic 65.0%
TCCTTCGTGGTCCACCGGTG+AGG + chr8_1:17670875-17670894 Msa1182530:intron 65.0%
CCTTCGTGGTCCACCGGTGA+GGG + chr8_1:17670876-17670895 Msa1182530:intron 65.0%
!! GGACTTGGTGGTCTCACCCC+TGG + chr8_1:17669321-17669340 Msa1182530:CDS 65.0%
AGCCCCCTGCAAGTGGACGA+TGG + chr8_1:17669721-17669740 Msa1182530:intron 65.0%
GCCCCCTGCAAGTGGACGAT+GGG + chr8_1:17669722-17669741 Msa1182530:intron 65.0%
CCCCATCGTCCACTTGCAGG+GGG - chr8_1:17669726-17669745 None:intergenic 65.0%
CCCCCTGCAAGTGGACGATG+GGG + chr8_1:17669723-17669742 Msa1182530:intron 65.0%
!! GGACTTGGTGCTCTCACCCC+TGG + chr8_1:17674791-17674810 Msa1182530:intron 65.0%
CGGCGAACCTCTCGCCGTCA+TGG - chr8_1:17670704-17670723 None:intergenic 70.0%
CCCTCACCGGTGGACCACGA+AGG - chr8_1:17670879-17670898 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 17669123 17676711 17669123 ID=Msa1182530;Name=Msa1182530
chr8_1 mRNA 17669123 17676711 17669123 ID=Msa1182530-mRNA-1;Parent=Msa1182530;Name=Msa1182530-mRNA-1;_AED=0.36;_eAED=0.36;_QI=0|0.83|0.71|1|0.66|0.42|7|1339|103
chr8_1 exon 17669123 17669342 17669123 ID=Msa1182530-mRNA-1:exon:6677;Parent=Msa1182530-mRNA-1
chr8_1 exon 17671096 17671434 17671096 ID=Msa1182530-mRNA-1:exon:6678;Parent=Msa1182530-mRNA-1
chr8_1 exon 17672437 17672525 17672437 ID=Msa1182530-mRNA-1:exon:6679;Parent=Msa1182530-mRNA-1
chr8_1 exon 17675051 17675136 17675051 ID=Msa1182530-mRNA-1:exon:6680;Parent=Msa1182530-mRNA-1
chr8_1 exon 17675242 17675408 17675242 ID=Msa1182530-mRNA-1:exon:6681;Parent=Msa1182530-mRNA-1
chr8_1 exon 17675657 17675739 17675657 ID=Msa1182530-mRNA-1:exon:6682;Parent=Msa1182530-mRNA-1
chr8_1 exon 17676045 17676711 17676045 ID=Msa1182530-mRNA-1:exon:6683;Parent=Msa1182530-mRNA-1
chr8_1 CDS 17669123 17669342 17669123 ID=Msa1182530-mRNA-1:cds;Parent=Msa1182530-mRNA-1
chr8_1 CDS 17671096 17671187 17671096 ID=Msa1182530-mRNA-1:cds;Parent=Msa1182530-mRNA-1
chr8_1 three_prime_UTR 17671188 17671434 17671188 ID=Msa1182530-mRNA-1:three_prime_utr;Parent=Msa1182530-mRNA-1
chr8_1 three_prime_UTR 17672437 17672525 17672437 ID=Msa1182530-mRNA-1:three_prime_utr;Parent=Msa1182530-mRNA-1
chr8_1 three_prime_UTR 17675051 17675136 17675051 ID=Msa1182530-mRNA-1:three_prime_utr;Parent=Msa1182530-mRNA-1
chr8_1 three_prime_UTR 17675242 17675408 17675242 ID=Msa1182530-mRNA-1:three_prime_utr;Parent=Msa1182530-mRNA-1
chr8_1 three_prime_UTR 17675657 17675739 17675657 ID=Msa1182530-mRNA-1:three_prime_utr;Parent=Msa1182530-mRNA-1
chr8_1 three_prime_UTR 17676045 17676711 17676045 ID=Msa1182530-mRNA-1:three_prime_utr;Parent=Msa1182530-mRNA-1
Gene Sequence

>Msa1182530

ATGGCACAAGTGAGAAACAAGCAAGTTATTTTGAGAGACTATGTGTCTGGTTTTCCTAAGGAATCAGACATGAACGTTGTTGATAGTACAATTACTCTCAACCTTCCACAAGGTTCCAATGATGTTGTTCTTCTCAAAAATCTCTACTTGTCCTGTGATCCTTACCTGAGAATCCTGATGGCCAAGGACACTATTGCAGGACTTGGTGGTCTCACCCCTGTACAAACACAAAAACCCACACGACTCAACCAACTCTTGACACATTTGTGTCACAACTCCTTCTTCATTAATCACTTTTCTGTTGTAAACTGA

Protein sequence

>Msa1182530

MAQVRNKQVILRDYVSGFPKESDMNVVDSTITLNLPQGSNDVVLLKNLYLSCDPYLRILMAKDTIAGLGGLTPVQTQKPTRLNQLLTHLCHNSFFINHFSVVN*