Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0983430 | AGC78924.1 | 80.184 | 217 | 19 | 2 | 75 | 267 | 15 | 231 | 4.64e-110 | 327 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0983430 | R4IUD6 | 80.184 | 217 | 19 | 2 | 75 | 267 | 15 | 231 | 2.22e-110 | 327 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0398200 | Msa0983430 | -0.807376 | 5.209629e-50 | -8.615850e-47 |
| Msa0433410 | Msa0983430 | 0.828636 | 8.053699e-55 | -8.615850e-47 |
| Msa0983130 | Msa0983430 | 0.828810 | 7.310813e-55 | -8.615850e-47 |
| Msa0983300 | Msa0983430 | 0.813241 | 2.827158e-51 | -8.615850e-47 |
| Msa0983430 | Msa1224580 | 0.806832 | 6.791858e-50 | -8.615850e-47 |
| Msa0983430 | Msa1392030 | 0.800256 | 1.569264e-48 | -8.615850e-47 |
| Msa0344690 | Msa0983430 | 0.801256 | 9.808719e-49 | -8.615850e-47 |
| Msa0927380 | Msa0983430 | -0.810807 | 9.593012e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 99 sgRNAs with CRISPR-Local
Find 348 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCTGGACCCAGACCCTTTC+TGG | 0.051220 | 6_4:+26504105 | Msa0983430:CDS |
| GCGACCATTTCGCGCGGTTC+GGG | 0.208436 | 6_4:-26503226 | None:intergenic |
| TACTCAAGTGGGTCTTCCTT+TGG | 0.239438 | 6_4:+26503544 | Msa0983430:intron |
| CTTTGGGCTTTGGCTGGCCT+TGG | 0.242011 | 6_4:+26503561 | Msa0983430:CDS |
| CAAAGTTAGAATATCATCTA+TGG | 0.256227 | 6_4:-26504045 | None:intergenic |
| GGCTTCGGTGTTCCTCTCTC+TGG | 0.270894 | 6_4:+26503582 | Msa0983430:CDS |
| GTGGGTCTTCCTTTGGGCTT+TGG | 0.280962 | 6_4:+26503551 | Msa0983430:intron |
| TAACTTCCAACGCACAAAAT+AGG | 0.287965 | 6_4:-26503609 | None:intergenic |
| GGAGTCGGGCAGCGGCTTCC+TGG | 0.307516 | 6_4:+26503825 | Msa0983430:CDS |
| GTCTTCCTTTGGGCTTTGGC+TGG | 0.310043 | 6_4:+26503555 | Msa0983430:CDS |
| ACTCAAGTGGGTCTTCCTTT+GGG | 0.312375 | 6_4:+26503545 | Msa0983430:intron |
| CAACCAGAGGCTGCGCAGCC+TGG | 0.313364 | 6_4:+26503930 | Msa0983430:CDS |
| ACCGAACCAGCCTTCTGGTC+TGG | 0.347290 | 6_4:+26504135 | Msa0983430:CDS |
| TAAGCGGGGAGTCTATCTTT+AGG | 0.356803 | 6_4:+26503874 | Msa0983430:CDS |
| GGCTGCGCAGCCTCTGGTTG+AGG | 0.361297 | 6_4:-26503927 | None:intergenic |
| TGCCCAGGCTGCGCAGCCTC+TGG | 0.363336 | 6_4:-26503933 | None:intergenic |
| GCTTCGGTGTTCCTCTCTCT+GGG | 0.379685 | 6_4:+26503583 | Msa0983430:CDS |
| ATGATGGATGCTAGTGGGGC+CGG | 0.383012 | 6_4:+26503709 | Msa0983430:CDS |
| TGAAAACCGAACCAGCCTTC+TGG | 0.384114 | 6_4:+26504130 | Msa0983430:CDS |
| CATCATTAGCTTAGCTAAAG+TGG | 0.386458 | 6_4:+26503455 | Msa0983430:CDS |
| GAGTGGTTGTCTATTTCTAT+AGG | 0.387269 | 6_4:+26503652 | Msa0983430:CDS |
| GCAGCCTCTGGTTGAGGTGC+GGG | 0.388745 | 6_4:-26503921 | None:intergenic |
| GATGGATGCTAGTGGGGCCG+GGG | 0.392236 | 6_4:+26503711 | Msa0983430:CDS |
| AGCTAAGCTAATGATGAAAC+AGG | 0.396669 | 6_4:-26503448 | None:intergenic |
| GCTTTGGCTGGCCTTGGCTT+CGG | 0.397625 | 6_4:+26503567 | Msa0983430:CDS |
| TGATGGATGCTAGTGGGGCC+GGG | 0.401037 | 6_4:+26503710 | Msa0983430:CDS |
| AAGCGGGGAGTCTATCTTTA+GGG | 0.403210 | 6_4:+26503875 | Msa0983430:CDS |
| CCCAGACCAGAAGGCTGGTT+CGG | 0.406201 | 6_4:-26504136 | None:intergenic |
| GGCCCTTCTGGAACTTGCCC+AGG | 0.408604 | 6_4:-26503948 | None:intergenic |
| CGCAGCCTCTGGTTGAGGTG+CGG | 0.408882 | 6_4:-26503922 | None:intergenic |
| CCGAACCAGCCTTCTGGTCT+GGG | 0.413254 | 6_4:+26504136 | Msa0983430:CDS |
| GCTGGACCCAGACCCTTTCT+GGG | 0.422366 | 6_4:+26504106 | Msa0983430:CDS |
| GGAGTCTATCTTTAGGGACT+TGG | 0.423367 | 6_4:+26503881 | Msa0983430:CDS |
| GCAAGTTCCAGAAGGGCCAC+TGG | 0.426055 | 6_4:+26503953 | Msa0983430:CDS |
| TTTGATTAACCTCAAAAGTC+AGG | 0.427306 | 6_4:+26504064 | Msa0983430:CDS |
| TGCAGCCTTCTCAGGGAGTC+GGG | 0.427533 | 6_4:+26503811 | Msa0983430:intron |
| GGTATAAGTTTGGTAATGGT+TGG | 0.433513 | 6_4:+26503085 | None:intergenic |
| AACCAGAGGCTGCGCAGCCT+GGG | 0.433781 | 6_4:+26503931 | Msa0983430:CDS |
| ATAAATTCCCCGGGCATAAG+CGG | 0.436174 | 6_4:+26503858 | Msa0983430:CDS |
| TAAATTCCCCGGGCATAAGC+GGG | 0.450006 | 6_4:+26503859 | Msa0983430:CDS |
| TGAGGTGCGGGCTCTCCTCC+GGG | 0.450730 | 6_4:-26503909 | None:intergenic |
| TTCGTTAAGTGCATCGAGCC+AGG | 0.451425 | 6_4:+26503392 | Msa0983430:CDS |
| GAATTTATTTCGAGCGCACC+AGG | 0.451857 | 6_4:-26503843 | None:intergenic |
| TGGAGCAGCAAACTCGGATT+CGG | 0.454873 | 6_4:+26503105 | Msa0983430:CDS |
| GTCAAGACGCAGTCGGGCGC+CGG | 0.455575 | 6_4:+26503185 | Msa0983430:CDS |
| TGTCTATTTCTATAGGCGTC+AGG | 0.465306 | 6_4:+26503659 | Msa0983430:CDS |
| TATATCTCGGATGGCCGAGC+TGG | 0.479352 | 6_4:+26504088 | Msa0983430:CDS |
| CAAGTTCCAGAAGGGCCACT+GGG | 0.482400 | 6_4:+26503954 | Msa0983430:CDS |
| AAAGTTAGAATATCATCTAT+GGG | 0.483783 | 6_4:-26504044 | None:intergenic |
| CCACTCCAACAAAAGATTGA+AGG | 0.495289 | 6_4:-26503635 | None:intergenic |
| TCATCATCTGCAGACAAATC+CGG | 0.497078 | 6_4:+26503423 | Msa0983430:CDS |
| CCCCTCTACATCGATGATGA+TGG | 0.502885 | 6_4:+26503693 | Msa0983430:CDS |
| CTTCTCAGGGAGTCGGGCAG+CGG | 0.504218 | 6_4:+26503817 | Msa0983430:intron |
| TAGACTCCCCGCTTATGCCC+GGG | 0.505227 | 6_4:-26503866 | None:intergenic |
| CAGATGATGATGTCCACTCC+TGG | 0.512739 | 6_4:-26503410 | None:intergenic |
| TTGCAGCCTTCTCAGGGAGT+CGG | 0.521197 | 6_4:+26503810 | Msa0983430:intron |
| GATGTAGAGGGGAGGTCTGT+AGG | 0.522816 | 6_4:-26503682 | None:intergenic |
| GCTAATGATGAAACAGGATC+CGG | 0.525173 | 6_4:-26503442 | None:intergenic |
| AGAGAGGAACACCGAAGCCA+AGG | 0.528291 | 6_4:-26503578 | None:intergenic |
| ACCATTTCGCGCGGTTCGGG+GGG | 0.529161 | 6_4:-26503223 | None:intergenic |
| CAGCCTGGGCAAGTTCCAGA+AGG | 0.530379 | 6_4:+26503945 | Msa0983430:CDS |
| CAAGGCCAGCCAAAGCCCAA+AGG | 0.531108 | 6_4:-26503560 | None:intergenic |
| TGCGCTCGAAATAAATTCCC+CGG | 0.535163 | 6_4:+26503848 | Msa0983430:CDS |
| GGCTCGATGCACTTAACGAA+AGG | 0.541703 | 6_4:-26503389 | None:intergenic |
| ATAGGGGTCAAGACGCAGTC+GGG | 0.546493 | 6_4:+26503179 | Msa0983430:CDS |
| TTTCAACCCAGAAAGGGTCT+GGG | 0.551240 | 6_4:-26504112 | None:intergenic |
| TTTAGGGACTTGGAACAGCC+CGG | 0.557074 | 6_4:+26503891 | Msa0983430:CDS |
| GGGGCACTTGAGTCAGCCGC+CGG | 0.563604 | 6_4:-26503204 | None:intergenic |
| GCTCGATGCACTTAACGAAA+GGG | 0.563861 | 6_4:-26503388 | None:intergenic |
| AATGGTTGGAGCAGCAAACT+CGG | 0.566691 | 6_4:+26503099 | None:intergenic |
| ATCCATCATCATCGATGTAG+AGG | 0.566776 | 6_4:-26503695 | None:intergenic |
| GAAAGGGTCTGGGTCCAGCT+CGG | 0.573434 | 6_4:-26504102 | None:intergenic |
| TCCATCATCATCGATGTAGA+GGG | 0.574173 | 6_4:-26503694 | None:intergenic |
| TCAAAAGTCAGGTTATATCT+CGG | 0.574500 | 6_4:+26504075 | Msa0983430:CDS |
| ATGGATGCTAGTGGGGCCGG+GGG | 0.575373 | 6_4:+26503712 | Msa0983430:CDS |
| CGATGATGATGGATGCTAGT+GGG | 0.578414 | 6_4:+26503704 | Msa0983430:CDS |
| ATGGAGTCTCCCAGACCAGA+AGG | 0.584070 | 6_4:-26504145 | None:intergenic |
| AGTCTCCCAGACCAGAAGGC+TGG | 0.597966 | 6_4:-26504141 | None:intergenic |
| CTTCGGTGTTCCTCTCTCTG+GGG | 0.600238 | 6_4:+26503584 | Msa0983430:CDS |
| AAAATAGGAACCCCAGAGAG+AGG | 0.601440 | 6_4:-26503594 | None:intergenic |
| GATAGGGGTCAAGACGCAGT+CGG | 0.604281 | 6_4:+26503178 | Msa0983430:CDS |
| AAGTCAGGTTATATCTCGGA+TGG | 0.606306 | 6_4:+26504079 | Msa0983430:CDS |
| AGAGCCCGCACCTCAACCAG+AGG | 0.606324 | 6_4:+26503917 | Msa0983430:CDS |
| AGTTCCAGAAGGGCCACTGG+GGG | 0.610658 | 6_4:+26503956 | Msa0983430:CDS |
| TAAGTGCATCGAGCCAGGAG+TGG | 0.611559 | 6_4:+26503397 | Msa0983430:CDS |
| GCGCTCGAAATAAATTCCCC+GGG | 0.615928 | 6_4:+26503849 | Msa0983430:CDS |
| AAGAATCAGAAGGATTCCCC+CGG | 0.619082 | 6_4:-26503728 | None:intergenic |
| AGTTAGAATATCATCTATGG+GGG | 0.621729 | 6_4:-26504042 | None:intergenic |
| AGCCTGGGCAAGTTCCAGAA+GGG | 0.641607 | 6_4:+26503946 | Msa0983430:CDS |
| AAGTTAGAATATCATCTATG+GGG | 0.650166 | 6_4:-26504043 | None:intergenic |
| AAGTTCCAGAAGGGCCACTG+GGG | 0.658875 | 6_4:+26503955 | Msa0983430:CDS |
| GATGATGATGGATGCTAGTG+GGG | 0.664745 | 6_4:+26503705 | Msa0983430:CDS |
| AAATTCCCCGGGCATAAGCG+GGG | 0.666522 | 6_4:+26503860 | Msa0983430:CDS |
| TCGATGATGATGGATGCTAG+TGG | 0.675438 | 6_4:+26503703 | Msa0983430:CDS |
| CCATCATCATCGATGTAGAG+GGG | 0.688611 | 6_4:-26503693 | None:intergenic |
| TCATCATCGATGTAGAGGGG+AGG | 0.694351 | 6_4:-26503690 | None:intergenic |
| TAATAGGCGACCATTTCGCG+CGG | 0.697149 | 6_4:-26503232 | None:intergenic |
| GTTAGAATATCATCTATGGG+GGG | 0.713113 | 6_4:-26504041 | None:intergenic |
| AGGGACTTGGAACAGCCCGG+AGG | 0.743098 | 6_4:+26503894 | Msa0983430:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATGAAAAAAGTTATAAAG+CGG | - | chr6_4:26503518-26503537 | None:intergenic | 15.0% |
| !! | TAATGAAAAAAGTTATAAAG+CGG | - | chr6_4:26503518-26503537 | None:intergenic | 15.0% |
| !! | AATGAAAAAAGTTATAAAGC+GGG | - | chr6_4:26503517-26503536 | None:intergenic | 20.0% |
| !! | AAAGTTAGAATATCATCTAT+GGG | - | chr6_4:26504047-26504066 | None:intergenic | 20.0% |
| !! | AATGAAAAAAGTTATAAAGC+GGG | - | chr6_4:26503517-26503536 | None:intergenic | 20.0% |
| !! | AAAGTTAGAATATCATCTAT+GGG | - | chr6_4:26504047-26504066 | None:intergenic | 20.0% |
| ! | AAGTTAGAATATCATCTATG+GGG | - | chr6_4:26504046-26504065 | None:intergenic | 25.0% |
| ! | CAAAGTTAGAATATCATCTA+TGG | - | chr6_4:26504048-26504067 | None:intergenic | 25.0% |
| ! | AAGTTAGAATATCATCTATG+GGG | - | chr6_4:26504046-26504065 | None:intergenic | 25.0% |
| ! | CAAAGTTAGAATATCATCTA+TGG | - | chr6_4:26504048-26504067 | None:intergenic | 25.0% |
| !!! | TCATTTTTTGGTAGTACGAA+GGG | + | chr6_4:26503136-26503155 | Msa0983430:CDS | 30.0% |
| TCATTAACACTATACTCAAG+TGG | + | chr6_4:26503532-26503551 | Msa0983430:intron | 30.0% | |
| CATTAACACTATACTCAAGT+GGG | + | chr6_4:26503533-26503552 | Msa0983430:intron | 30.0% | |
| !!! | TCCTTCTGATTCTTTTTTTG+AGG | + | chr6_4:26503737-26503756 | Msa0983430:CDS | 30.0% |
| !!! | CCTTCTGATTCTTTTTTTGA+GGG | + | chr6_4:26503738-26503757 | Msa0983430:CDS | 30.0% |
| AGTTAGAATATCATCTATGG+GGG | - | chr6_4:26504045-26504064 | None:intergenic | 30.0% | |
| TTTGATTAACCTCAAAAGTC+AGG | + | chr6_4:26504064-26504083 | Msa0983430:CDS | 30.0% | |
| TCAAAAGTCAGGTTATATCT+CGG | + | chr6_4:26504075-26504094 | Msa0983430:CDS | 30.0% | |
| !!! | TCATTTTTTGGTAGTACGAA+GGG | + | chr6_4:26503136-26503155 | Msa0983430:CDS | 30.0% |
| TCATTAACACTATACTCAAG+TGG | + | chr6_4:26503532-26503551 | Msa0983430:intron | 30.0% | |
| CATTAACACTATACTCAAGT+GGG | + | chr6_4:26503533-26503552 | Msa0983430:intron | 30.0% | |
| !!! | TCCTTCTGATTCTTTTTTTG+AGG | + | chr6_4:26503737-26503756 | Msa0983430:CDS | 30.0% |
| !!! | CCTTCTGATTCTTTTTTTGA+GGG | + | chr6_4:26503738-26503757 | Msa0983430:CDS | 30.0% |
| AGTTAGAATATCATCTATGG+GGG | - | chr6_4:26504045-26504064 | None:intergenic | 30.0% | |
| TTTGATTAACCTCAAAAGTC+AGG | + | chr6_4:26504064-26504083 | Msa0983430:CDS | 30.0% | |
| TCAAAAGTCAGGTTATATCT+CGG | + | chr6_4:26504075-26504094 | Msa0983430:CDS | 30.0% | |
| !!! | TCGGCAAGAATCTCATTTTT+TGG | + | chr6_4:26503124-26503143 | Msa0983430:CDS | 35.0% |
| !!! | CTCATTTTTTGGTAGTACGA+AGG | + | chr6_4:26503135-26503154 | Msa0983430:CDS | 35.0% |
| !!! | CATTTTTTGGTAGTACGAAG+GGG | + | chr6_4:26503137-26503156 | Msa0983430:CDS | 35.0% |
| !!! | ATTTTTTGGTAGTACGAAGG+GGG | + | chr6_4:26503138-26503157 | Msa0983430:CDS | 35.0% |
| AATTGGCCCAAAAATTGGAT+AGG | + | chr6_4:26503161-26503180 | Msa0983430:CDS | 35.0% | |
| ATTGGCCCAAAAATTGGATA+GGG | + | chr6_4:26503162-26503181 | Msa0983430:CDS | 35.0% | |
| ! | TTGACCCCTATCCAATTTTT+GGG | - | chr6_4:26503170-26503189 | None:intergenic | 35.0% |
| AGCTAAGCTAATGATGAAAC+AGG | - | chr6_4:26503451-26503470 | None:intergenic | 35.0% | |
| ! | CATCATTAGCTTAGCTAAAG+TGG | + | chr6_4:26503455-26503474 | Msa0983430:CDS | 35.0% |
| CTAAAGTGGAATAGTATGAC+TGG | + | chr6_4:26503469-26503488 | Msa0983430:intron | 35.0% | |
| TAACTTCCAACGCACAAAAT+AGG | - | chr6_4:26503612-26503631 | None:intergenic | 35.0% | |
| ! | ATTTTGTGCGTTGGAAGTTA+CGG | + | chr6_4:26503612-26503631 | Msa0983430:CDS | 35.0% |
| !! | GAGTGGTTGTCTATTTCTAT+AGG | + | chr6_4:26503652-26503671 | Msa0983430:CDS | 35.0% |
| CCCTCAAAAAAAGAATCAGA+AGG | - | chr6_4:26503741-26503760 | None:intergenic | 35.0% | |
| GTTAGAATATCATCTATGGG+GGG | - | chr6_4:26504044-26504063 | None:intergenic | 35.0% | |
| ! | GAGATATAACCTGACTTTTG+AGG | - | chr6_4:26504076-26504095 | None:intergenic | 35.0% |
| !!! | TCGGCAAGAATCTCATTTTT+TGG | + | chr6_4:26503124-26503143 | Msa0983430:CDS | 35.0% |
| !!! | CTCATTTTTTGGTAGTACGA+AGG | + | chr6_4:26503135-26503154 | Msa0983430:CDS | 35.0% |
| !!! | CATTTTTTGGTAGTACGAAG+GGG | + | chr6_4:26503137-26503156 | Msa0983430:CDS | 35.0% |
| !!! | ATTTTTTGGTAGTACGAAGG+GGG | + | chr6_4:26503138-26503157 | Msa0983430:CDS | 35.0% |
| AATTGGCCCAAAAATTGGAT+AGG | + | chr6_4:26503161-26503180 | Msa0983430:CDS | 35.0% | |
| ATTGGCCCAAAAATTGGATA+GGG | + | chr6_4:26503162-26503181 | Msa0983430:CDS | 35.0% | |
| ! | TTGACCCCTATCCAATTTTT+GGG | - | chr6_4:26503170-26503189 | None:intergenic | 35.0% |
| AGCTAAGCTAATGATGAAAC+AGG | - | chr6_4:26503451-26503470 | None:intergenic | 35.0% | |
| ! | CATCATTAGCTTAGCTAAAG+TGG | + | chr6_4:26503455-26503474 | Msa0983430:CDS | 35.0% |
| CTAAAGTGGAATAGTATGAC+TGG | + | chr6_4:26503469-26503488 | Msa0983430:intron | 35.0% | |
| TAACTTCCAACGCACAAAAT+AGG | - | chr6_4:26503612-26503631 | None:intergenic | 35.0% | |
| ! | ATTTTGTGCGTTGGAAGTTA+CGG | + | chr6_4:26503612-26503631 | Msa0983430:CDS | 35.0% |
| !! | GAGTGGTTGTCTATTTCTAT+AGG | + | chr6_4:26503652-26503671 | Msa0983430:CDS | 35.0% |
| CCCTCAAAAAAAGAATCAGA+AGG | - | chr6_4:26503741-26503760 | None:intergenic | 35.0% | |
| GTTAGAATATCATCTATGGG+GGG | - | chr6_4:26504044-26504063 | None:intergenic | 35.0% | |
| ! | GAGATATAACCTGACTTTTG+AGG | - | chr6_4:26504076-26504095 | None:intergenic | 35.0% |
| TTGGCCCAAAAATTGGATAG+GGG | + | chr6_4:26503163-26503182 | Msa0983430:CDS | 40.0% | |
| ! | CTTGACCCCTATCCAATTTT+TGG | - | chr6_4:26503171-26503190 | None:intergenic | 40.0% |
| AGCATCCTTTAAGTGAGTAG+GGG | - | chr6_4:26503320-26503339 | None:intergenic | 40.0% | |
| CAGCATCCTTTAAGTGAGTA+GGG | - | chr6_4:26503321-26503340 | None:intergenic | 40.0% | |
| TCATCATCTGCAGACAAATC+CGG | + | chr6_4:26503423-26503442 | Msa0983430:CDS | 40.0% | |
| GCTAATGATGAAACAGGATC+CGG | - | chr6_4:26503445-26503464 | None:intergenic | 40.0% | |
| !! | GAATAGTATGACTGGCTTTC+CGG | + | chr6_4:26503477-26503496 | Msa0983430:intron | 40.0% |
| ! | TACGGCCTTCAATCTTTTGT+TGG | + | chr6_4:26503630-26503649 | Msa0983430:CDS | 40.0% |
| CCACTCCAACAAAAGATTGA+AGG | - | chr6_4:26503638-26503657 | None:intergenic | 40.0% | |
| ! | CCTTCAATCTTTTGTTGGAG+TGG | + | chr6_4:26503635-26503654 | Msa0983430:CDS | 40.0% |
| !! | TGTCTATTTCTATAGGCGTC+AGG | + | chr6_4:26503659-26503678 | Msa0983430:CDS | 40.0% |
| TCCATCATCATCGATGTAGA+GGG | - | chr6_4:26503697-26503716 | None:intergenic | 40.0% | |
| ATCCATCATCATCGATGTAG+AGG | - | chr6_4:26503698-26503717 | None:intergenic | 40.0% | |
| !!! | TCTTTTTTTGAGGGTCTCTC+TGG | + | chr6_4:26503747-26503766 | Msa0983430:intron | 40.0% |
| ATTTCTTTCTTCCCCAGGTT+CGG | - | chr6_4:26503790-26503809 | None:intergenic | 40.0% | |
| TGCAAATTTCTTTCTTCCCC+AGG | - | chr6_4:26503795-26503814 | None:intergenic | 40.0% | |
| AAGAAATTTGCAGCCTTCTC+AGG | + | chr6_4:26503803-26503822 | Msa0983430:intron | 40.0% | |
| AGAAATTTGCAGCCTTCTCA+GGG | + | chr6_4:26503804-26503823 | Msa0983430:intron | 40.0% | |
| ! | TCTTTGCTGCCTCTAAAAAG+AGG | + | chr6_4:26504009-26504028 | Msa0983430:CDS | 40.0% |
| ! | CTTTGCTGCCTCTAAAAAGA+GGG | + | chr6_4:26504010-26504029 | Msa0983430:CDS | 40.0% |
| ! | TTTGCTGCCTCTAAAAAGAG+GGG | + | chr6_4:26504011-26504030 | Msa0983430:CDS | 40.0% |
| AAGTCAGGTTATATCTCGGA+TGG | + | chr6_4:26504079-26504098 | Msa0983430:CDS | 40.0% | |
| ! | TTCGGTTTTCAACCCAGAAA+GGG | - | chr6_4:26504121-26504140 | None:intergenic | 40.0% |
| TTGGCCCAAAAATTGGATAG+GGG | + | chr6_4:26503163-26503182 | Msa0983430:CDS | 40.0% | |
| ! | CTTGACCCCTATCCAATTTT+TGG | - | chr6_4:26503171-26503190 | None:intergenic | 40.0% |
| AGCATCCTTTAAGTGAGTAG+GGG | - | chr6_4:26503320-26503339 | None:intergenic | 40.0% | |
| CAGCATCCTTTAAGTGAGTA+GGG | - | chr6_4:26503321-26503340 | None:intergenic | 40.0% | |
| TCATCATCTGCAGACAAATC+CGG | + | chr6_4:26503423-26503442 | Msa0983430:CDS | 40.0% | |
| GCTAATGATGAAACAGGATC+CGG | - | chr6_4:26503445-26503464 | None:intergenic | 40.0% | |
| !! | GAATAGTATGACTGGCTTTC+CGG | + | chr6_4:26503477-26503496 | Msa0983430:intron | 40.0% |
| ! | TACGGCCTTCAATCTTTTGT+TGG | + | chr6_4:26503630-26503649 | Msa0983430:CDS | 40.0% |
| CCACTCCAACAAAAGATTGA+AGG | - | chr6_4:26503638-26503657 | None:intergenic | 40.0% | |
| ! | CCTTCAATCTTTTGTTGGAG+TGG | + | chr6_4:26503635-26503654 | Msa0983430:CDS | 40.0% |
| !! | TGTCTATTTCTATAGGCGTC+AGG | + | chr6_4:26503659-26503678 | Msa0983430:CDS | 40.0% |
| TCCATCATCATCGATGTAGA+GGG | - | chr6_4:26503697-26503716 | None:intergenic | 40.0% | |
| ATCCATCATCATCGATGTAG+AGG | - | chr6_4:26503698-26503717 | None:intergenic | 40.0% | |
| !!! | TCTTTTTTTGAGGGTCTCTC+TGG | + | chr6_4:26503747-26503766 | Msa0983430:intron | 40.0% |
| ATTTCTTTCTTCCCCAGGTT+CGG | - | chr6_4:26503790-26503809 | None:intergenic | 40.0% | |
| TGCAAATTTCTTTCTTCCCC+AGG | - | chr6_4:26503795-26503814 | None:intergenic | 40.0% | |
| AAGAAATTTGCAGCCTTCTC+AGG | + | chr6_4:26503803-26503822 | Msa0983430:intron | 40.0% | |
| AGAAATTTGCAGCCTTCTCA+GGG | + | chr6_4:26503804-26503823 | Msa0983430:intron | 40.0% | |
| ! | TCTTTGCTGCCTCTAAAAAG+AGG | + | chr6_4:26504009-26504028 | Msa0983430:CDS | 40.0% |
| ! | CTTTGCTGCCTCTAAAAAGA+GGG | + | chr6_4:26504010-26504029 | Msa0983430:CDS | 40.0% |
| ! | TTTGCTGCCTCTAAAAAGAG+GGG | + | chr6_4:26504011-26504030 | Msa0983430:CDS | 40.0% |
| AAGTCAGGTTATATCTCGGA+TGG | + | chr6_4:26504079-26504098 | Msa0983430:CDS | 40.0% | |
| ! | TTCGGTTTTCAACCCAGAAA+GGG | - | chr6_4:26504121-26504140 | None:intergenic | 40.0% |
| CGAAATGGTCGCCTATTACA+CGG | + | chr6_4:26503237-26503256 | Msa0983430:intron | 45.0% | |
| GAGTTAGTGAGCCGTGTAAT+AGG | - | chr6_4:26503251-26503270 | None:intergenic | 45.0% | |
| !! | TGGGGGTACCTATTATTCGT+CGG | + | chr6_4:26503282-26503301 | Msa0983430:intron | 45.0% |
| GCAGCATCCTTTAAGTGAGT+AGG | - | chr6_4:26503322-26503341 | None:intergenic | 45.0% | |
| ! | AGGATGCTGCTTAATGACGA+AGG | + | chr6_4:26503332-26503351 | Msa0983430:intron | 45.0% |
| GCTCGATGCACTTAACGAAA+GGG | - | chr6_4:26503391-26503410 | None:intergenic | 45.0% | |
| TACTCAAGTGGGTCTTCCTT+TGG | + | chr6_4:26503544-26503563 | Msa0983430:intron | 45.0% | |
| ACTCAAGTGGGTCTTCCTTT+GGG | + | chr6_4:26503545-26503564 | Msa0983430:intron | 45.0% | |
| AAAATAGGAACCCCAGAGAG+AGG | - | chr6_4:26503597-26503616 | None:intergenic | 45.0% | |
| CCATCATCATCGATGTAGAG+GGG | - | chr6_4:26503696-26503715 | None:intergenic | 45.0% | |
| !! | TCGATGATGATGGATGCTAG+TGG | + | chr6_4:26503703-26503722 | Msa0983430:CDS | 45.0% |
| !! | CGATGATGATGGATGCTAGT+GGG | + | chr6_4:26503704-26503723 | Msa0983430:CDS | 45.0% |
| !! | GATGATGATGGATGCTAGTG+GGG | + | chr6_4:26503705-26503724 | Msa0983430:CDS | 45.0% |
| AAGAATCAGAAGGATTCCCC+CGG | - | chr6_4:26503731-26503750 | None:intergenic | 45.0% | |
| TTTCAAAATACCGCCGAACC+TGG | + | chr6_4:26503774-26503793 | Msa0983430:intron | 45.0% | |
| TTCAAAATACCGCCGAACCT+GGG | + | chr6_4:26503775-26503794 | Msa0983430:intron | 45.0% | |
| GAATTTATTTCGAGCGCACC+AGG | - | chr6_4:26503846-26503865 | None:intergenic | 45.0% | |
| TGCGCTCGAAATAAATTCCC+CGG | + | chr6_4:26503848-26503867 | Msa0983430:CDS | 45.0% | |
| ATAAATTCCCCGGGCATAAG+CGG | + | chr6_4:26503858-26503877 | Msa0983430:CDS | 45.0% | |
| TAAGCGGGGAGTCTATCTTT+AGG | + | chr6_4:26503874-26503893 | Msa0983430:CDS | 45.0% | |
| AAGCGGGGAGTCTATCTTTA+GGG | + | chr6_4:26503875-26503894 | Msa0983430:CDS | 45.0% | |
| ! | GGAGTCTATCTTTAGGGACT+TGG | + | chr6_4:26503881-26503900 | Msa0983430:CDS | 45.0% |
| ! | TTGCTGCCTCTAAAAAGAGG+GGG | + | chr6_4:26504012-26504031 | Msa0983430:CDS | 45.0% |
| TTTCAACCCAGAAAGGGTCT+GGG | - | chr6_4:26504115-26504134 | None:intergenic | 45.0% | |
| ! | TTTTCAACCCAGAAAGGGTC+TGG | - | chr6_4:26504116-26504135 | None:intergenic | 45.0% |
| ! | GTTCGGTTTTCAACCCAGAA+AGG | - | chr6_4:26504122-26504141 | None:intergenic | 45.0% |
| CGAAATGGTCGCCTATTACA+CGG | + | chr6_4:26503237-26503256 | Msa0983430:intron | 45.0% | |
| GAGTTAGTGAGCCGTGTAAT+AGG | - | chr6_4:26503251-26503270 | None:intergenic | 45.0% | |
| !! | TGGGGGTACCTATTATTCGT+CGG | + | chr6_4:26503282-26503301 | Msa0983430:intron | 45.0% |
| GCAGCATCCTTTAAGTGAGT+AGG | - | chr6_4:26503322-26503341 | None:intergenic | 45.0% | |
| ! | AGGATGCTGCTTAATGACGA+AGG | + | chr6_4:26503332-26503351 | Msa0983430:intron | 45.0% |
| GCTCGATGCACTTAACGAAA+GGG | - | chr6_4:26503391-26503410 | None:intergenic | 45.0% | |
| TACTCAAGTGGGTCTTCCTT+TGG | + | chr6_4:26503544-26503563 | Msa0983430:intron | 45.0% | |
| ACTCAAGTGGGTCTTCCTTT+GGG | + | chr6_4:26503545-26503564 | Msa0983430:intron | 45.0% | |
| AAAATAGGAACCCCAGAGAG+AGG | - | chr6_4:26503597-26503616 | None:intergenic | 45.0% | |
| CCATCATCATCGATGTAGAG+GGG | - | chr6_4:26503696-26503715 | None:intergenic | 45.0% | |
| !! | TCGATGATGATGGATGCTAG+TGG | + | chr6_4:26503703-26503722 | Msa0983430:CDS | 45.0% |
| !! | CGATGATGATGGATGCTAGT+GGG | + | chr6_4:26503704-26503723 | Msa0983430:CDS | 45.0% |
| !! | GATGATGATGGATGCTAGTG+GGG | + | chr6_4:26503705-26503724 | Msa0983430:CDS | 45.0% |
| AAGAATCAGAAGGATTCCCC+CGG | - | chr6_4:26503731-26503750 | None:intergenic | 45.0% | |
| TTTCAAAATACCGCCGAACC+TGG | + | chr6_4:26503774-26503793 | Msa0983430:intron | 45.0% | |
| TTCAAAATACCGCCGAACCT+GGG | + | chr6_4:26503775-26503794 | Msa0983430:intron | 45.0% | |
| GAATTTATTTCGAGCGCACC+AGG | - | chr6_4:26503846-26503865 | None:intergenic | 45.0% | |
| TGCGCTCGAAATAAATTCCC+CGG | + | chr6_4:26503848-26503867 | Msa0983430:CDS | 45.0% | |
| ATAAATTCCCCGGGCATAAG+CGG | + | chr6_4:26503858-26503877 | Msa0983430:CDS | 45.0% | |
| TAAGCGGGGAGTCTATCTTT+AGG | + | chr6_4:26503874-26503893 | Msa0983430:CDS | 45.0% | |
| AAGCGGGGAGTCTATCTTTA+GGG | + | chr6_4:26503875-26503894 | Msa0983430:CDS | 45.0% | |
| ! | GGAGTCTATCTTTAGGGACT+TGG | + | chr6_4:26503881-26503900 | Msa0983430:CDS | 45.0% |
| ! | TTGCTGCCTCTAAAAAGAGG+GGG | + | chr6_4:26504012-26504031 | Msa0983430:CDS | 45.0% |
| TTTCAACCCAGAAAGGGTCT+GGG | - | chr6_4:26504115-26504134 | None:intergenic | 45.0% | |
| ! | TTTTCAACCCAGAAAGGGTC+TGG | - | chr6_4:26504116-26504135 | None:intergenic | 45.0% |
| ! | GTTCGGTTTTCAACCCAGAA+AGG | - | chr6_4:26504122-26504141 | None:intergenic | 45.0% |
| TGGAGCAGCAAACTCGGATT+CGG | + | chr6_4:26503105-26503124 | Msa0983430:CDS | 50.0% | |
| TGGTAGTACGAAGGGGGAAT+TGG | + | chr6_4:26503144-26503163 | Msa0983430:CDS | 50.0% | |
| GGGGGAATTGGCCCAAAAAT+TGG | + | chr6_4:26503156-26503175 | Msa0983430:CDS | 50.0% | |
| TAATAGGCGACCATTTCGCG+CGG | - | chr6_4:26503235-26503254 | None:intergenic | 50.0% | |
| GGGTACCTATTATTCGTCGG+CGG | + | chr6_4:26503285-26503304 | Msa0983430:intron | 50.0% | |
| GGCTCGATGCACTTAACGAA+AGG | - | chr6_4:26503392-26503411 | None:intergenic | 50.0% | |
| TTCGTTAAGTGCATCGAGCC+AGG | + | chr6_4:26503392-26503411 | Msa0983430:CDS | 50.0% | |
| ! | CAGATGATGATGTCCACTCC+TGG | - | chr6_4:26503413-26503432 | None:intergenic | 50.0% |
| ! | GCGGGTTTCGTCTCATTTTC+CGG | - | chr6_4:26503499-26503518 | None:intergenic | 50.0% |
| ! | GGGGTTCCTATTTTGTGCGT+TGG | + | chr6_4:26503603-26503622 | Msa0983430:CDS | 50.0% |
| TCATCATCGATGTAGAGGGG+AGG | - | chr6_4:26503693-26503712 | None:intergenic | 50.0% | |
| CCCCTCTACATCGATGATGA+TGG | + | chr6_4:26503693-26503712 | Msa0983430:CDS | 50.0% | |
| !! | TTTTTGAGGGTCTCTCTGGC+TGG | + | chr6_4:26503751-26503770 | Msa0983430:intron | 50.0% |
| TCAAAATACCGCCGAACCTG+GGG | + | chr6_4:26503776-26503795 | Msa0983430:intron | 50.0% | |
| GCGCTCGAAATAAATTCCCC+GGG | + | chr6_4:26503849-26503868 | Msa0983430:CDS | 50.0% | |
| TAAATTCCCCGGGCATAAGC+GGG | + | chr6_4:26503859-26503878 | Msa0983430:CDS | 50.0% | |
| TTTAGGGACTTGGAACAGCC+CGG | + | chr6_4:26503891-26503910 | Msa0983430:CDS | 50.0% | |
| TTCTCAAAGACTTCCCCCAG+TGG | - | chr6_4:26503972-26503991 | None:intergenic | 50.0% | |
| TGAAAACCGAACCAGCCTTC+TGG | + | chr6_4:26504130-26504149 | Msa0983430:CDS | 50.0% | |
| TGGAGCAGCAAACTCGGATT+CGG | + | chr6_4:26503105-26503124 | Msa0983430:CDS | 50.0% | |
| TGGTAGTACGAAGGGGGAAT+TGG | + | chr6_4:26503144-26503163 | Msa0983430:CDS | 50.0% | |
| GGGGGAATTGGCCCAAAAAT+TGG | + | chr6_4:26503156-26503175 | Msa0983430:CDS | 50.0% | |
| TAATAGGCGACCATTTCGCG+CGG | - | chr6_4:26503235-26503254 | None:intergenic | 50.0% | |
| GGGTACCTATTATTCGTCGG+CGG | + | chr6_4:26503285-26503304 | Msa0983430:intron | 50.0% | |
| GGCTCGATGCACTTAACGAA+AGG | - | chr6_4:26503392-26503411 | None:intergenic | 50.0% | |
| TTCGTTAAGTGCATCGAGCC+AGG | + | chr6_4:26503392-26503411 | Msa0983430:CDS | 50.0% | |
| ! | CAGATGATGATGTCCACTCC+TGG | - | chr6_4:26503413-26503432 | None:intergenic | 50.0% |
| ! | GCGGGTTTCGTCTCATTTTC+CGG | - | chr6_4:26503499-26503518 | None:intergenic | 50.0% |
| ! | GGGGTTCCTATTTTGTGCGT+TGG | + | chr6_4:26503603-26503622 | Msa0983430:CDS | 50.0% |
| TCATCATCGATGTAGAGGGG+AGG | - | chr6_4:26503693-26503712 | None:intergenic | 50.0% | |
| CCCCTCTACATCGATGATGA+TGG | + | chr6_4:26503693-26503712 | Msa0983430:CDS | 50.0% | |
| !! | TTTTTGAGGGTCTCTCTGGC+TGG | + | chr6_4:26503751-26503770 | Msa0983430:intron | 50.0% |
| TCAAAATACCGCCGAACCTG+GGG | + | chr6_4:26503776-26503795 | Msa0983430:intron | 50.0% | |
| GCGCTCGAAATAAATTCCCC+GGG | + | chr6_4:26503849-26503868 | Msa0983430:CDS | 50.0% | |
| TAAATTCCCCGGGCATAAGC+GGG | + | chr6_4:26503859-26503878 | Msa0983430:CDS | 50.0% | |
| TTTAGGGACTTGGAACAGCC+CGG | + | chr6_4:26503891-26503910 | Msa0983430:CDS | 50.0% | |
| TTCTCAAAGACTTCCCCCAG+TGG | - | chr6_4:26503972-26503991 | None:intergenic | 50.0% | |
| TGAAAACCGAACCAGCCTTC+TGG | + | chr6_4:26504130-26504149 | Msa0983430:CDS | 50.0% | |
| GATAGGGGTCAAGACGCAGT+CGG | + | chr6_4:26503178-26503197 | Msa0983430:CDS | 55.0% | |
| ATAGGGGTCAAGACGCAGTC+GGG | + | chr6_4:26503179-26503198 | Msa0983430:CDS | 55.0% | |
| ACGGCTCACTAACTCTGCCT+GGG | + | chr6_4:26503256-26503275 | Msa0983430:intron | 55.0% | |
| ACTAACTCTGCCTGGGGTGT+GGG | + | chr6_4:26503263-26503282 | Msa0983430:intron | 55.0% | |
| CCTATTATTCGTCGGCGGTC+CGG | + | chr6_4:26503290-26503309 | Msa0983430:intron | 55.0% | |
| ! | TTAAGTGAGTAGGGGTGCGC+CGG | - | chr6_4:26503312-26503331 | None:intergenic | 55.0% |
| GCGCACCCCTACTCACTTAA+AGG | + | chr6_4:26503312-26503331 | Msa0983430:intron | 55.0% | |
| TAAGTGCATCGAGCCAGGAG+TGG | + | chr6_4:26503397-26503416 | Msa0983430:CDS | 55.0% | |
| GTGGGTCTTCCTTTGGGCTT+TGG | + | chr6_4:26503551-26503570 | Msa0983430:intron | 55.0% | |
| ! | GTCTTCCTTTGGGCTTTGGC+TGG | + | chr6_4:26503555-26503574 | Msa0983430:CDS | 55.0% |
| AGAGAGGAACACCGAAGCCA+AGG | - | chr6_4:26503581-26503600 | None:intergenic | 55.0% | |
| !! | GCTTCGGTGTTCCTCTCTCT+GGG | + | chr6_4:26503583-26503602 | Msa0983430:CDS | 55.0% |
| !! | CTTCGGTGTTCCTCTCTCTG+GGG | + | chr6_4:26503584-26503603 | Msa0983430:CDS | 55.0% |
| GATGTAGAGGGGAGGTCTGT+AGG | - | chr6_4:26503685-26503704 | None:intergenic | 55.0% | |
| !! | ATGATGGATGCTAGTGGGGC+CGG | + | chr6_4:26503709-26503728 | Msa0983430:CDS | 55.0% |
| TCTTTCTTCCCCAGGTTCGG+CGG | - | chr6_4:26503787-26503806 | None:intergenic | 55.0% | |
| TTGCAGCCTTCTCAGGGAGT+CGG | + | chr6_4:26503810-26503829 | Msa0983430:intron | 55.0% | |
| AAATTCCCCGGGCATAAGCG+GGG | + | chr6_4:26503860-26503879 | Msa0983430:CDS | 55.0% | |
| ATAGACTCCCCGCTTATGCC+CGG | - | chr6_4:26503870-26503889 | None:intergenic | 55.0% | |
| AGCCTGGGCAAGTTCCAGAA+GGG | + | chr6_4:26503946-26503965 | Msa0983430:CDS | 55.0% | |
| CAAGTTCCAGAAGGGCCACT+GGG | + | chr6_4:26503954-26503973 | Msa0983430:CDS | 55.0% | |
| AAGTTCCAGAAGGGCCACTG+GGG | + | chr6_4:26503955-26503974 | Msa0983430:CDS | 55.0% | |
| ! | CTGCCTCTAAAAAGAGGGGG+TGG | + | chr6_4:26504015-26504034 | Msa0983430:CDS | 55.0% |
| ! | CTGCCACCCCCTCTTTTTAG+AGG | - | chr6_4:26504021-26504040 | None:intergenic | 55.0% |
| TATATCTCGGATGGCCGAGC+TGG | + | chr6_4:26504088-26504107 | Msa0983430:CDS | 55.0% | |
| ATGGAGTCTCCCAGACCAGA+AGG | - | chr6_4:26504148-26504167 | None:intergenic | 55.0% | |
| GATAGGGGTCAAGACGCAGT+CGG | + | chr6_4:26503178-26503197 | Msa0983430:CDS | 55.0% | |
| ATAGGGGTCAAGACGCAGTC+GGG | + | chr6_4:26503179-26503198 | Msa0983430:CDS | 55.0% | |
| ACGGCTCACTAACTCTGCCT+GGG | + | chr6_4:26503256-26503275 | Msa0983430:intron | 55.0% | |
| ACTAACTCTGCCTGGGGTGT+GGG | + | chr6_4:26503263-26503282 | Msa0983430:intron | 55.0% | |
| CCTATTATTCGTCGGCGGTC+CGG | + | chr6_4:26503290-26503309 | Msa0983430:intron | 55.0% | |
| ! | TTAAGTGAGTAGGGGTGCGC+CGG | - | chr6_4:26503312-26503331 | None:intergenic | 55.0% |
| GCGCACCCCTACTCACTTAA+AGG | + | chr6_4:26503312-26503331 | Msa0983430:intron | 55.0% | |
| TAAGTGCATCGAGCCAGGAG+TGG | + | chr6_4:26503397-26503416 | Msa0983430:CDS | 55.0% | |
| GTGGGTCTTCCTTTGGGCTT+TGG | + | chr6_4:26503551-26503570 | Msa0983430:intron | 55.0% | |
| ! | GTCTTCCTTTGGGCTTTGGC+TGG | + | chr6_4:26503555-26503574 | Msa0983430:CDS | 55.0% |
| AGAGAGGAACACCGAAGCCA+AGG | - | chr6_4:26503581-26503600 | None:intergenic | 55.0% | |
| !! | GCTTCGGTGTTCCTCTCTCT+GGG | + | chr6_4:26503583-26503602 | Msa0983430:CDS | 55.0% |
| !! | CTTCGGTGTTCCTCTCTCTG+GGG | + | chr6_4:26503584-26503603 | Msa0983430:CDS | 55.0% |
| GATGTAGAGGGGAGGTCTGT+AGG | - | chr6_4:26503685-26503704 | None:intergenic | 55.0% | |
| !! | ATGATGGATGCTAGTGGGGC+CGG | + | chr6_4:26503709-26503728 | Msa0983430:CDS | 55.0% |
| TCTTTCTTCCCCAGGTTCGG+CGG | - | chr6_4:26503787-26503806 | None:intergenic | 55.0% | |
| TTGCAGCCTTCTCAGGGAGT+CGG | + | chr6_4:26503810-26503829 | Msa0983430:intron | 55.0% | |
| AAATTCCCCGGGCATAAGCG+GGG | + | chr6_4:26503860-26503879 | Msa0983430:CDS | 55.0% | |
| ATAGACTCCCCGCTTATGCC+CGG | - | chr6_4:26503870-26503889 | None:intergenic | 55.0% | |
| AGCCTGGGCAAGTTCCAGAA+GGG | + | chr6_4:26503946-26503965 | Msa0983430:CDS | 55.0% | |
| CAAGTTCCAGAAGGGCCACT+GGG | + | chr6_4:26503954-26503973 | Msa0983430:CDS | 55.0% | |
| AAGTTCCAGAAGGGCCACTG+GGG | + | chr6_4:26503955-26503974 | Msa0983430:CDS | 55.0% | |
| ! | CTGCCTCTAAAAAGAGGGGG+TGG | + | chr6_4:26504015-26504034 | Msa0983430:CDS | 55.0% |
| ! | CTGCCACCCCCTCTTTTTAG+AGG | - | chr6_4:26504021-26504040 | None:intergenic | 55.0% |
| TATATCTCGGATGGCCGAGC+TGG | + | chr6_4:26504088-26504107 | Msa0983430:CDS | 55.0% | |
| ATGGAGTCTCCCAGACCAGA+AGG | - | chr6_4:26504148-26504167 | None:intergenic | 55.0% | |
| CACGGCTCACTAACTCTGCC+TGG | + | chr6_4:26503255-26503274 | Msa0983430:intron | 60.0% | |
| CGGCTCACTAACTCTGCCTG+GGG | + | chr6_4:26503257-26503276 | Msa0983430:intron | 60.0% | |
| CACTAACTCTGCCTGGGGTG+TGG | + | chr6_4:26503262-26503281 | Msa0983430:intron | 60.0% | |
| CTAACTCTGCCTGGGGTGTG+GGG | + | chr6_4:26503264-26503283 | Msa0983430:intron | 60.0% | |
| TAACTCTGCCTGGGGTGTGG+GGG | + | chr6_4:26503265-26503284 | Msa0983430:intron | 60.0% | |
| AATAGGTACCCCCACACCCC+AGG | - | chr6_4:26503276-26503295 | None:intergenic | 60.0% | |
| CCGGACCGCCGACGAATAAT+AGG | - | chr6_4:26503293-26503312 | None:intergenic | 60.0% | |
| CAAGGCCAGCCAAAGCCCAA+AGG | - | chr6_4:26503563-26503582 | None:intergenic | 60.0% | |
| !! | CTTTGGGCTTTGGCTGGCCT+TGG | + | chr6_4:26503561-26503580 | Msa0983430:CDS | 60.0% |
| !! | GCTTTGGCTGGCCTTGGCTT+CGG | + | chr6_4:26503567-26503586 | Msa0983430:CDS | 60.0% |
| !! | GGCTTCGGTGTTCCTCTCTC+TGG | + | chr6_4:26503582-26503601 | Msa0983430:CDS | 60.0% |
| ! | TGATGGATGCTAGTGGGGCC+GGG | + | chr6_4:26503710-26503729 | Msa0983430:CDS | 60.0% |
| TGCAGCCTTCTCAGGGAGTC+GGG | + | chr6_4:26503811-26503830 | Msa0983430:intron | 60.0% | |
| TAGACTCCCCGCTTATGCCC+GGG | - | chr6_4:26503869-26503888 | None:intergenic | 60.0% | |
| CAGCCTGGGCAAGTTCCAGA+AGG | + | chr6_4:26503945-26503964 | Msa0983430:CDS | 60.0% | |
| GCAAGTTCCAGAAGGGCCAC+TGG | + | chr6_4:26503953-26503972 | Msa0983430:CDS | 60.0% | |
| AGTTCCAGAAGGGCCACTGG+GGG | + | chr6_4:26503956-26503975 | Msa0983430:CDS | 60.0% | |
| GAAAGGGTCTGGGTCCAGCT+CGG | - | chr6_4:26504105-26504124 | None:intergenic | 60.0% | |
| AGCTGGACCCAGACCCTTTC+TGG | + | chr6_4:26504105-26504124 | Msa0983430:CDS | 60.0% | |
| GCTGGACCCAGACCCTTTCT+GGG | + | chr6_4:26504106-26504125 | Msa0983430:CDS | 60.0% | |
| ACCGAACCAGCCTTCTGGTC+TGG | + | chr6_4:26504135-26504154 | Msa0983430:CDS | 60.0% | |
| ! | CCCAGACCAGAAGGCTGGTT+CGG | - | chr6_4:26504139-26504158 | None:intergenic | 60.0% |
| CCGAACCAGCCTTCTGGTCT+GGG | + | chr6_4:26504136-26504155 | Msa0983430:CDS | 60.0% | |
| AGTCTCCCAGACCAGAAGGC+TGG | - | chr6_4:26504144-26504163 | None:intergenic | 60.0% | |
| CACGGCTCACTAACTCTGCC+TGG | + | chr6_4:26503255-26503274 | Msa0983430:intron | 60.0% | |
| CGGCTCACTAACTCTGCCTG+GGG | + | chr6_4:26503257-26503276 | Msa0983430:intron | 60.0% | |
| CACTAACTCTGCCTGGGGTG+TGG | + | chr6_4:26503262-26503281 | Msa0983430:intron | 60.0% | |
| CTAACTCTGCCTGGGGTGTG+GGG | + | chr6_4:26503264-26503283 | Msa0983430:intron | 60.0% | |
| TAACTCTGCCTGGGGTGTGG+GGG | + | chr6_4:26503265-26503284 | Msa0983430:intron | 60.0% | |
| AATAGGTACCCCCACACCCC+AGG | - | chr6_4:26503276-26503295 | None:intergenic | 60.0% | |
| CCGGACCGCCGACGAATAAT+AGG | - | chr6_4:26503293-26503312 | None:intergenic | 60.0% | |
| CAAGGCCAGCCAAAGCCCAA+AGG | - | chr6_4:26503563-26503582 | None:intergenic | 60.0% | |
| !! | CTTTGGGCTTTGGCTGGCCT+TGG | + | chr6_4:26503561-26503580 | Msa0983430:CDS | 60.0% |
| !! | GCTTTGGCTGGCCTTGGCTT+CGG | + | chr6_4:26503567-26503586 | Msa0983430:CDS | 60.0% |
| !! | GGCTTCGGTGTTCCTCTCTC+TGG | + | chr6_4:26503582-26503601 | Msa0983430:CDS | 60.0% |
| ! | TGATGGATGCTAGTGGGGCC+GGG | + | chr6_4:26503710-26503729 | Msa0983430:CDS | 60.0% |
| TGCAGCCTTCTCAGGGAGTC+GGG | + | chr6_4:26503811-26503830 | Msa0983430:intron | 60.0% | |
| TAGACTCCCCGCTTATGCCC+GGG | - | chr6_4:26503869-26503888 | None:intergenic | 60.0% | |
| CAGCCTGGGCAAGTTCCAGA+AGG | + | chr6_4:26503945-26503964 | Msa0983430:CDS | 60.0% | |
| GCAAGTTCCAGAAGGGCCAC+TGG | + | chr6_4:26503953-26503972 | Msa0983430:CDS | 60.0% | |
| AGTTCCAGAAGGGCCACTGG+GGG | + | chr6_4:26503956-26503975 | Msa0983430:CDS | 60.0% | |
| GAAAGGGTCTGGGTCCAGCT+CGG | - | chr6_4:26504105-26504124 | None:intergenic | 60.0% | |
| AGCTGGACCCAGACCCTTTC+TGG | + | chr6_4:26504105-26504124 | Msa0983430:CDS | 60.0% | |
| GCTGGACCCAGACCCTTTCT+GGG | + | chr6_4:26504106-26504125 | Msa0983430:CDS | 60.0% | |
| ACCGAACCAGCCTTCTGGTC+TGG | + | chr6_4:26504135-26504154 | Msa0983430:CDS | 60.0% | |
| ! | CCCAGACCAGAAGGCTGGTT+CGG | - | chr6_4:26504139-26504158 | None:intergenic | 60.0% |
| CCGAACCAGCCTTCTGGTCT+GGG | + | chr6_4:26504136-26504155 | Msa0983430:CDS | 60.0% | |
| AGTCTCCCAGACCAGAAGGC+TGG | - | chr6_4:26504144-26504163 | None:intergenic | 60.0% | |
| ! | ACCATTTCGCGCGGTTCGGG+GGG | - | chr6_4:26503226-26503245 | None:intergenic | 65.0% |
| ! | GACCATTTCGCGCGGTTCGG+GGG | - | chr6_4:26503227-26503246 | None:intergenic | 65.0% |
| CGACCATTTCGCGCGGTTCG+GGG | - | chr6_4:26503228-26503247 | None:intergenic | 65.0% | |
| GCGACCATTTCGCGCGGTTC+GGG | - | chr6_4:26503229-26503248 | None:intergenic | 65.0% | |
| GGCGACCATTTCGCGCGGTT+CGG | - | chr6_4:26503230-26503249 | None:intergenic | 65.0% | |
| GATGGATGCTAGTGGGGCCG+GGG | + | chr6_4:26503711-26503730 | Msa0983430:CDS | 65.0% | |
| ATGGATGCTAGTGGGGCCGG+GGG | + | chr6_4:26503712-26503731 | Msa0983430:CDS | 65.0% | |
| CTTCTCAGGGAGTCGGGCAG+CGG | + | chr6_4:26503817-26503836 | Msa0983430:intron | 65.0% | |
| AGACTCCCCGCTTATGCCCG+GGG | - | chr6_4:26503868-26503887 | None:intergenic | 65.0% | |
| AGGGACTTGGAACAGCCCGG+AGG | + | chr6_4:26503894-26503913 | Msa0983430:CDS | 65.0% | |
| TTGAGGTGCGGGCTCTCCTC+CGG | - | chr6_4:26503913-26503932 | None:intergenic | 65.0% | |
| AGAGCCCGCACCTCAACCAG+AGG | + | chr6_4:26503917-26503936 | Msa0983430:CDS | 65.0% | |
| GCAGCCTCTGGTTGAGGTGC+GGG | - | chr6_4:26503924-26503943 | None:intergenic | 65.0% | |
| CGCAGCCTCTGGTTGAGGTG+CGG | - | chr6_4:26503925-26503944 | None:intergenic | 65.0% | |
| AACCAGAGGCTGCGCAGCCT+GGG | + | chr6_4:26503931-26503950 | Msa0983430:CDS | 65.0% | |
| !! | GGCCCTTCTGGAACTTGCCC+AGG | - | chr6_4:26503951-26503970 | None:intergenic | 65.0% |
| ACTTCCCCCAGTGGCCCTTC+TGG | - | chr6_4:26503963-26503982 | None:intergenic | 65.0% | |
| ! | ACCATTTCGCGCGGTTCGGG+GGG | - | chr6_4:26503226-26503245 | None:intergenic | 65.0% |
| ! | GACCATTTCGCGCGGTTCGG+GGG | - | chr6_4:26503227-26503246 | None:intergenic | 65.0% |
| CGACCATTTCGCGCGGTTCG+GGG | - | chr6_4:26503228-26503247 | None:intergenic | 65.0% | |
| GCGACCATTTCGCGCGGTTC+GGG | - | chr6_4:26503229-26503248 | None:intergenic | 65.0% | |
| GGCGACCATTTCGCGCGGTT+CGG | - | chr6_4:26503230-26503249 | None:intergenic | 65.0% | |
| GATGGATGCTAGTGGGGCCG+GGG | + | chr6_4:26503711-26503730 | Msa0983430:CDS | 65.0% | |
| ATGGATGCTAGTGGGGCCGG+GGG | + | chr6_4:26503712-26503731 | Msa0983430:CDS | 65.0% | |
| CTTCTCAGGGAGTCGGGCAG+CGG | + | chr6_4:26503817-26503836 | Msa0983430:intron | 65.0% | |
| AGACTCCCCGCTTATGCCCG+GGG | - | chr6_4:26503868-26503887 | None:intergenic | 65.0% | |
| AGGGACTTGGAACAGCCCGG+AGG | + | chr6_4:26503894-26503913 | Msa0983430:CDS | 65.0% | |
| TTGAGGTGCGGGCTCTCCTC+CGG | - | chr6_4:26503913-26503932 | None:intergenic | 65.0% | |
| AGAGCCCGCACCTCAACCAG+AGG | + | chr6_4:26503917-26503936 | Msa0983430:CDS | 65.0% | |
| GCAGCCTCTGGTTGAGGTGC+GGG | - | chr6_4:26503924-26503943 | None:intergenic | 65.0% | |
| CGCAGCCTCTGGTTGAGGTG+CGG | - | chr6_4:26503925-26503944 | None:intergenic | 65.0% | |
| AACCAGAGGCTGCGCAGCCT+GGG | + | chr6_4:26503931-26503950 | Msa0983430:CDS | 65.0% | |
| !! | GGCCCTTCTGGAACTTGCCC+AGG | - | chr6_4:26503951-26503970 | None:intergenic | 65.0% |
| ACTTCCCCCAGTGGCCCTTC+TGG | - | chr6_4:26503963-26503982 | None:intergenic | 65.0% | |
| GTCAAGACGCAGTCGGGCGC+CGG | + | chr6_4:26503185-26503204 | Msa0983430:CDS | 70.0% | |
| ! | GGGGCACTTGAGTCAGCCGC+CGG | - | chr6_4:26503207-26503226 | None:intergenic | 70.0% |
| CGCTGCCCGACTCCCTGAGA+AGG | - | chr6_4:26503819-26503838 | None:intergenic | 70.0% | |
| TGAGGTGCGGGCTCTCCTCC+GGG | - | chr6_4:26503912-26503931 | None:intergenic | 70.0% | |
| GGCTGCGCAGCCTCTGGTTG+AGG | - | chr6_4:26503930-26503949 | None:intergenic | 70.0% | |
| CAACCAGAGGCTGCGCAGCC+TGG | + | chr6_4:26503930-26503949 | Msa0983430:CDS | 70.0% | |
| GTCAAGACGCAGTCGGGCGC+CGG | + | chr6_4:26503185-26503204 | Msa0983430:CDS | 70.0% | |
| ! | GGGGCACTTGAGTCAGCCGC+CGG | - | chr6_4:26503207-26503226 | None:intergenic | 70.0% |
| CGCTGCCCGACTCCCTGAGA+AGG | - | chr6_4:26503819-26503838 | None:intergenic | 70.0% | |
| TGAGGTGCGGGCTCTCCTCC+GGG | - | chr6_4:26503912-26503931 | None:intergenic | 70.0% | |
| GGCTGCGCAGCCTCTGGTTG+AGG | - | chr6_4:26503930-26503949 | None:intergenic | 70.0% | |
| CAACCAGAGGCTGCGCAGCC+TGG | + | chr6_4:26503930-26503949 | Msa0983430:CDS | 70.0% | |
| !! | AAGACGCAGTCGGGCGCCGG+CGG | + | chr6_4:26503188-26503207 | Msa0983430:CDS | 75.0% |
| GCCCCCCGAACCGCGCGAAA+TGG | + | chr6_4:26503222-26503241 | Msa0983430:CDS | 75.0% | |
| GGAGTCGGGCAGCGGCTTCC+TGG | + | chr6_4:26503825-26503844 | Msa0983430:CDS | 75.0% | |
| TGCCCAGGCTGCGCAGCCTC+TGG | - | chr6_4:26503936-26503955 | None:intergenic | 75.0% | |
| !! | AAGACGCAGTCGGGCGCCGG+CGG | + | chr6_4:26503188-26503207 | Msa0983430:CDS | 75.0% |
| GCCCCCCGAACCGCGCGAAA+TGG | + | chr6_4:26503222-26503241 | Msa0983430:CDS | 75.0% | |
| GGAGTCGGGCAGCGGCTTCC+TGG | + | chr6_4:26503825-26503844 | Msa0983430:CDS | 75.0% | |
| TGCCCAGGCTGCGCAGCCTC+TGG | - | chr6_4:26503936-26503955 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_4 | gene | 26503100 | 26504172 | 26503100 | ID=Msa0983430;Name=Msa0983430 |
| chr6_4 | mRNA | 26503100 | 26504172 | 26503100 | ID=Msa0983430-mRNA-1;Parent=Msa0983430;Name=Msa0983430-mRNA-1;_AED=0.35;_eAED=0.66;_QI=0|0|0|0.75|0|0|4|0|267 |
| chr6_4 | exon | 26503100 | 26503243 | 26503100 | ID=Msa0983430-mRNA-1:exon:7507;Parent=Msa0983430-mRNA-1 |
| chr6_4 | exon | 26503378 | 26503481 | 26503378 | ID=Msa0983430-mRNA-1:exon:7508;Parent=Msa0983430-mRNA-1 |
| chr6_4 | exon | 26503552 | 26503759 | 26503552 | ID=Msa0983430-mRNA-1:exon:7509;Parent=Msa0983430-mRNA-1 |
| chr6_4 | exon | 26503825 | 26504172 | 26503825 | ID=Msa0983430-mRNA-1:exon:7510;Parent=Msa0983430-mRNA-1 |
| chr6_4 | CDS | 26503100 | 26503243 | 26503100 | ID=Msa0983430-mRNA-1:cds;Parent=Msa0983430-mRNA-1 |
| chr6_4 | CDS | 26503378 | 26503481 | 26503378 | ID=Msa0983430-mRNA-1:cds;Parent=Msa0983430-mRNA-1 |
| chr6_4 | CDS | 26503552 | 26503759 | 26503552 | ID=Msa0983430-mRNA-1:cds;Parent=Msa0983430-mRNA-1 |
| chr6_4 | CDS | 26503825 | 26504172 | 26503825 | ID=Msa0983430-mRNA-1:cds;Parent=Msa0983430-mRNA-1 |
| Gene Sequence |
| Protein sequence |
