Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1392030 | KEH16850.1 | 86.301 | 511 | 2 | 4 | 1 | 444 | 4 | 513 | 0.0 | 850 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1392030 | sp|Q04050|NU4M_BRACM | 95.906 | 171 | 7 | 0 | 273 | 443 | 155 | 325 | 2.05e-105 | 325 |
| Msa1392030 | sp|Q04050|NU4M_BRACM | 78.808 | 151 | 10 | 1 | 1 | 129 | 4 | 154 | 1.16e-69 | 232 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1392030 | A0A072TTK3 | 86.301 | 511 | 2 | 4 | 1 | 444 | 4 | 513 | 0.0 | 850 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0069500 | Msa1392030 | 0.867269 | 1.549634e-65 | -8.615850e-47 |
| Msa0069510 | Msa1392030 | 0.861142 | 1.262604e-63 | -8.615850e-47 |
| Msa0069520 | Msa1392030 | 0.833500 | 5.146236e-56 | -8.615850e-47 |
| Msa1391960 | Msa1392030 | 0.855024 | 8.325678e-62 | -8.615850e-47 |
| Msa1391970 | Msa1392030 | 0.895286 | 1.107095e-75 | -8.615850e-47 |
| Msa1391980 | Msa1392030 | 0.810175 | 1.313681e-50 | -8.615850e-47 |
| Msa1392010 | Msa1392030 | 0.838082 | 3.551054e-57 | -8.615850e-47 |
| Msa1392030 | Msa1392120 | 0.934933 | 1.871816e-96 | -8.615850e-47 |
| Msa1392030 | Msa1392160 | 0.909973 | 3.146377e-82 | -8.615850e-47 |
| Msa1392030 | Msa1436930 | 0.838317 | 3.089497e-57 | -8.615850e-47 |
| Msa1392030 | Msa1453860 | 0.860178 | 2.476096e-63 | -8.615850e-47 |
| Msa1392030 | Msa1453870 | 0.814599 | 1.419155e-51 | -8.615850e-47 |
| Msa0697990 | Msa1392030 | 0.883713 | 3.554016e-71 | -8.615850e-47 |
| Msa1224580 | Msa1392030 | 0.816036 | 6.800838e-52 | -8.615850e-47 |
| Msa1228620 | Msa1392030 | 0.849977 | 2.286054e-60 | -8.615850e-47 |
| Msa0983130 | Msa1392030 | 0.875130 | 3.926938e-68 | -8.615850e-47 |
| Msa0983160 | Msa1392030 | 0.814501 | 1.492061e-51 | -8.615850e-47 |
| Msa0983170 | Msa1392030 | 0.873596 | 1.300529e-67 | -8.615850e-47 |
| Msa0983180 | Msa1392030 | 0.848908 | 4.539846e-60 | -8.615850e-47 |
| Msa0983190 | Msa1392030 | 0.907468 | 4.907416e-81 | -8.615850e-47 |
| Msa0983210 | Msa1392030 | 0.846656 | 1.893742e-59 | -8.615850e-47 |
| Msa0983220 | Msa1392030 | 0.836471 | 9.176047e-57 | -8.615850e-47 |
| Msa0983230 | Msa1392030 | 0.844708 | 6.395178e-59 | -8.615850e-47 |
| Msa0983260 | Msa1392030 | 0.839907 | 1.196305e-57 | -8.615850e-47 |
| Msa0983300 | Msa1392030 | 0.979839 | 7.410438e-149 | -8.615850e-47 |
| Msa0983310 | Msa1392030 | 0.804122 | 2.512998e-49 | -8.615850e-47 |
| Msa0983320 | Msa1392030 | 0.837911 | 3.930615e-57 | -8.615850e-47 |
| Msa0983340 | Msa1392030 | 0.800766 | 1.235577e-48 | -8.615850e-47 |
| Msa0983350 | Msa1392030 | 0.895229 | 1.168715e-75 | -8.615850e-47 |
| Msa0983360 | Msa1392030 | 0.860738 | 1.675684e-63 | -8.615850e-47 |
| Msa0983430 | Msa1392030 | 0.800256 | 1.569264e-48 | -8.615850e-47 |
| Msa0983460 | Msa1392030 | 0.935010 | 1.660215e-96 | -8.615850e-47 |
| Msa0983490 | Msa1392030 | 0.843774 | 1.139214e-58 | -8.615850e-47 |
| Msa0983500 | Msa1392030 | 0.861249 | 1.171088e-63 | -8.615850e-47 |
| Msa0983520 | Msa1392030 | 0.907236 | 6.302072e-81 | -8.615850e-47 |
| Msa0983530 | Msa1392030 | 0.849574 | 2.962996e-60 | -8.615850e-47 |
| Msa0983540 | Msa1392030 | 0.872644 | 2.715382e-67 | -8.615850e-47 |
| Msa0983550 | Msa1392030 | 0.837817 | 4.155622e-57 | -8.615850e-47 |
| Msa0595640 | Msa1392030 | 0.872959 | 2.129718e-67 | -8.615850e-47 |
| Msa0902770 | Msa1392030 | 0.800035 | 1.740912e-48 | -8.615850e-47 |
| Msa0908820 | Msa1392030 | 0.844923 | 5.596947e-59 | -8.615850e-47 |
| Msa0908830 | Msa1392030 | 0.886308 | 3.829185e-72 | -8.615850e-47 |
| Msa0908840 | Msa1392030 | 0.850373 | 1.771340e-60 | -8.615850e-47 |
| Msa0908850 | Msa1392030 | 0.916022 | 2.934162e-85 | -8.615850e-47 |
| Msa0908870 | Msa1392030 | 0.871300 | 7.589959e-67 | -8.615850e-47 |
| Msa0908920 | Msa1392030 | 0.846958 | 1.565511e-59 | -8.615850e-47 |
| Msa0908930 | Msa1392030 | 0.850988 | 1.188755e-60 | -8.615850e-47 |
| Msa0919990 | Msa1392030 | 0.862607 | 4.495548e-64 | -8.615850e-47 |
| Msa0920000 | Msa1392030 | 0.847836 | 8.988236e-60 | -8.615850e-47 |
| Msa0920020 | Msa1392030 | 0.830261 | 3.244691e-55 | -8.615850e-47 |
| Msa0920060 | Msa1392030 | 0.948629 | 6.452232e-107 | -8.615850e-47 |
| Msa0944900 | Msa1392030 | 0.877076 | 8.395556e-69 | -8.615850e-47 |
| Msa0944920 | Msa1392030 | 0.904974 | 6.999152e-80 | -8.615850e-47 |
| Msa0944930 | Msa1392030 | 0.849388 | 3.339544e-60 | -8.615850e-47 |
| Msa0944940 | Msa1392030 | 0.873915 | 1.015494e-67 | -8.615850e-47 |
| Msa0944950 | Msa1392030 | 0.827580 | 1.446425e-54 | -8.615850e-47 |
| Msa0944990 | Msa1392030 | 0.836587 | 8.575277e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1392030 | MtrunA17_MTg0491571 | 100.000 | 154 | 0 | 0 | 302 | 455 | 1 | 154 | 6.96e-104 | 305 |
| Msa1392030 | MtrunA17_MTg0491541 | 87.209 | 172 | 0 | 1 | 1 | 150 | 4 | 175 | 2.72e-99 | 295 |
| Msa1392030 | MtrunA17_CPg0492231 | 38.953 | 172 | 101 | 3 | 273 | 441 | 151 | 321 | 7.97e-27 | 112 |
| Msa1392030 | MtrunA17_Chr4g0016261 | 38.953 | 172 | 101 | 3 | 273 | 441 | 151 | 321 | 7.97e-27 | 112 |
| Msa1392030 | MtrunA17_Chr7g0221901 | 36.774 | 155 | 94 | 3 | 273 | 424 | 151 | 304 | 4.62e-21 | 93.2 |
| Msa1392030 | MtrunA17_Chr7g0245851 | 37.584 | 149 | 90 | 2 | 298 | 443 | 96 | 244 | 6.75e-19 | 90.1 |
| Msa1392030 | MtrunA17_Chr4g0000781 | 39.326 | 89 | 54 | 0 | 331 | 419 | 31 | 119 | 1.15e-13 | 68.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1392030 | ATMG00580.1 | 95.906 | 171 | 7 | 0 | 273 | 443 | 155 | 325 | 1.64e-106 | 325 |
| Msa1392030 | ATMG00580.1 | 78.667 | 150 | 10 | 1 | 1 | 128 | 4 | 153 | 2.50e-69 | 229 |
| Msa1392030 | ATCG01050.1 | 36.970 | 165 | 100 | 3 | 273 | 434 | 156 | 319 | 5.56e-25 | 107 |
Find 154 sgRNAs with CRISPR-Local
Find 670 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCGGTCGTATTCTTGAATT+TGG | 0.135250 | tig0021468:+48075 | None:intergenic |
| CCTTACTCTACCATTATTAT+AGG | 0.168884 | tig0021468:-46306 | Msa1392030:CDS |
| GGCAGGAATTCCTTCAAAAT+TGG | 0.199829 | tig0021468:-46001 | Msa1392030:CDS |
| CTTACTCTACCATTATTATA+GGG | 0.238983 | tig0021468:-46305 | Msa1392030:CDS |
| CTATGGTACCTGTTCATATT+TGG | 0.260516 | tig0021468:-46071 | Msa1392030:CDS |
| AGCAAGTGAGCGGTTCTTTC+GGG | 0.279911 | tig0021468:-46590 | Msa1392030:CDS |
| AACAATGCAGCTTGCGTTGC+GGG | 0.283405 | tig0021468:+46533 | None:intergenic |
| GAGAAGCGGGCCGGGCCCTA+CGG | 0.317472 | tig0021468:-46566 | Msa1392030:CDS |
| ATTCCTCGTCAAGTCAGTTT+GGG | 0.324141 | tig0021468:-47360 | Msa1392030:CDS |
| ATAGGGATTAGCACGCTTTC+GGG | 0.326260 | tig0021468:+47727 | None:intergenic |
| TAGCAAGTGAGCGGTTCTTT+CGG | 0.329107 | tig0021468:-46591 | Msa1392030:CDS |
| TGGACACACTTGCGCGAATT+CGG | 0.333350 | tig0021468:-47332 | Msa1392030:CDS |
| CCACCGGTAAATTCCGCTTT+GGG | 0.347973 | tig0021468:-46335 | Msa1392030:CDS |
| CATAGGGATTAGCACGCTTT+CGG | 0.354669 | tig0021468:+47726 | None:intergenic |
| CACTTGCTAGCCGGACTAGT+GGG | 0.363128 | tig0021468:+46605 | None:intergenic |
| AATTGAGATTTGGCCGTAGA+AGG | 0.368282 | tig0021468:+47982 | None:intergenic |
| AGAAGCGGGCCGGGCCCTAC+GGG | 0.368962 | tig0021468:-46565 | Msa1392030:CDS |
| GATTCCTCGTCAAGTCAGTT+TGG | 0.369164 | tig0021468:-47361 | Msa1392030:CDS |
| GCTTTCCACAAATTGAGATT+TGG | 0.369783 | tig0021468:+47972 | None:intergenic |
| CATATGAATCTGGTGACTAT+TGG | 0.369787 | tig0021468:-45814 | Msa1392030:CDS |
| AGCGGCGCCAAATCTTTCTA+TGG | 0.370679 | tig0021468:-46128 | Msa1392030:CDS |
| ACCCCATACCCCTATAATAA+TGG | 0.383720 | tig0021468:+46296 | None:intergenic |
| CAGATCCAAGTAAAGTATAA+AGG | 0.388161 | tig0021468:+46235 | None:intergenic |
| ACCACCGGTAAATTCCGCTT+TGG | 0.390411 | tig0021468:-46336 | Msa1392030:CDS |
| TCGAATTGTATCCGAGGAAC+AGG | 0.391620 | tig0021468:+48006 | None:intergenic |
| TGGTCTGGTATGAGAAGTTA+TGG | 0.393011 | tig0021468:-47838 | Msa1392030:CDS |
| AGCGGGCCGGGCCCTACGGG+CGG | 0.394718 | tig0021468:-46562 | Msa1392030:CDS |
| GGACACACTTGCGCGAATTC+GGG | 0.399654 | tig0021468:-47331 | Msa1392030:CDS |
| CTCAGTAGCCCATATGAATC+TGG | 0.399943 | tig0021468:-45824 | Msa1392030:CDS |
| AAGCAATCCATAGAAAGATT+TGG | 0.399968 | tig0021468:+46121 | None:intergenic |
| GCAGGAATTCCTTCAAAATT+GGG | 0.401849 | tig0021468:-46000 | Msa1392030:CDS |
| TGACTATTGGTATGTTTAGT+CGG | 0.404377 | tig0021468:-45801 | Msa1392030:CDS |
| GTTGTGTTTGTTCGCGAGAA+TGG | 0.414062 | tig0021468:-47383 | Msa1392030:CDS |
| AGGTGCCTCTACATGAGCTT+CGG | 0.414244 | tig0021468:+46044 | None:intergenic |
| GGTTAATGATATTTGTAAAT+CGG | 0.416720 | tig0021468:+46164 | None:intergenic |
| CTTTCGGGCGAGAAGCGGGC+CGG | 0.417028 | tig0021468:-46575 | Msa1392030:CDS |
| CTACCATTATTATAGGGGTA+TGG | 0.418456 | tig0021468:-46299 | Msa1392030:CDS |
| CTTGAATTTGGAATGAAAAG+AGG | 0.422041 | tig0021468:+48087 | None:intergenic |
| GGTGCTCCTAGGTGTGTGTA+GGG | 0.429310 | tig0021468:-47406 | Msa1392030:CDS |
| GCTGAGCATCTTCTATTCGC+TGG | 0.430029 | tig0021468:-47694 | Msa1392030:CDS |
| CCTATAATAATGGTAGAGTA+AGG | 0.430488 | tig0021468:+46306 | None:intergenic |
| AGGACCTCGACCCGCCTACT+CGG | 0.431985 | tig0021468:-47453 | Msa1392030:CDS |
| CAATAGTCACCAGATTCATA+TGG | 0.432659 | tig0021468:+45815 | None:intergenic |
| TACGGCCAAATCTCAATTTG+TGG | 0.433634 | tig0021468:-47977 | Msa1392030:CDS |
| AGTGGAACAAAGTGTTGCTT+CGG | 0.433644 | tig0021468:+45939 | None:intergenic |
| GGGTGCTCCTAGGTGTGTGT+AGG | 0.434974 | tig0021468:-47407 | Msa1392030:CDS |
| TACCATTATTATAGGGGTAT+GGG | 0.437852 | tig0021468:-46298 | Msa1392030:CDS |
| CCGCCTACTCGGGTCTTGTA+TGG | 0.439573 | tig0021468:-47442 | Msa1392030:CDS |
| GACTATTGGTATGTTTAGTC+GGG | 0.443793 | tig0021468:-45800 | Msa1392030:CDS |
| AGATGCCCGCCCGTAGGGCC+CGG | 0.447393 | tig0021468:+46556 | None:intergenic |
| TGCGGGAGATGCCCGCCCGT+AGG | 0.453221 | tig0021468:+46550 | None:intergenic |
| GGTTCTTTCGGGCGAGAAGC+GGG | 0.455477 | tig0021468:-46579 | Msa1392030:CDS |
| GGTGCCTCTACATGAGCTTC+GGG | 0.458004 | tig0021468:+46045 | None:intergenic |
| AGAAGGGAGTGGCTACCTAC+TGG | 0.458710 | tig0021468:-46373 | Msa1392030:intron |
| TTTCGGGCGAGAAGCGGGCC+GGG | 0.458974 | tig0021468:-46574 | Msa1392030:CDS |
| GCGGGCCGGGCCCTACGGGC+GGG | 0.469692 | tig0021468:-46561 | Msa1392030:CDS |
| CCTAGCACGGGACACAGAAT+AGG | 0.476428 | tig0021468:+48120 | None:intergenic |
| GTTTACGTCCATCCCTGGTT+GGG | 0.481674 | tig0021468:+47272 | None:intergenic |
| GATCGCCGTGTTCCGCATGC+TGG | 0.481676 | tig0021468:-47773 | Msa1392030:CDS |
| TTAGTCGGGCGGCGGCCGTT+AGG | 0.483853 | tig0021468:-45786 | Msa1392030:CDS |
| ATGCAGGAAGGGGTGCTCCT+AGG | 0.490368 | tig0021468:-47417 | Msa1392030:CDS |
| TACGAGTTTACGTCCATCCC+TGG | 0.491127 | tig0021468:+47267 | None:intergenic |
| CGGTTCTTTCGGGCGAGAAG+CGG | 0.491506 | tig0021468:-46580 | Msa1392030:CDS |
| AAGTGTTGCTTCGGGAAACA+TGG | 0.492432 | tig0021468:+45948 | None:intergenic |
| GCGGGAGATGCCCGCCCGTA+GGG | 0.493347 | tig0021468:+46551 | None:intergenic |
| CCTATTCTGTGTCCCGTGCT+AGG | 0.494168 | tig0021468:-48120 | Msa1392030:CDS |
| AAAGCGGAATTTACCGGTGG+TGG | 0.495678 | tig0021468:+46338 | None:intergenic |
| GCAGGATCCGTCATCTTGGC+AGG | 0.496212 | tig0021468:-46018 | Msa1392030:CDS |
| AGGAATAATGCTTCCTAGCA+CGG | 0.496785 | tig0021468:+48107 | None:intergenic |
| TGCTCAGCTCCGCACAACAT+AGG | 0.497448 | tig0021468:+47709 | None:intergenic |
| TCGGGTAACCAAATATGAAC+AGG | 0.498282 | tig0021468:+46063 | None:intergenic |
| CCTTCAAAATTGGGAGCCCA+CGG | 0.499065 | tig0021468:-45991 | Msa1392030:CDS |
| TACGGCAGGATCCGTCATCT+TGG | 0.499811 | tig0021468:-46022 | Msa1392030:CDS |
| GTGGAACAAAGTGTTGCTTC+GGG | 0.501640 | tig0021468:+45940 | None:intergenic |
| AGTTTACGTCCATCCCTGGT+TGG | 0.505541 | tig0021468:+47271 | None:intergenic |
| CGGGTCTTGTATGGATATGC+AGG | 0.507152 | tig0021468:-47433 | Msa1392030:CDS |
| GCTCAGCTCCGCACAACATA+GGG | 0.513596 | tig0021468:+47710 | None:intergenic |
| GATACAATTCGATCCTTCTA+CGG | 0.522369 | tig0021468:-47995 | Msa1392030:CDS |
| CTTCAAAATTGGGAGCCCAC+GGG | 0.524867 | tig0021468:-45990 | Msa1392030:CDS |
| ATACGACCGATACGATTGAT+TGG | 0.528813 | tig0021468:-48063 | Msa1392030:CDS |
| CATGTAGAGGCACCTACGGC+AGG | 0.529345 | tig0021468:-46036 | Msa1392030:CDS |
| TTCCTCGTCAAGTCAGTTTG+GGG | 0.533182 | tig0021468:-47359 | Msa1392030:CDS |
| AGCTCATGTAGAGGCACCTA+CGG | 0.533300 | tig0021468:-46040 | Msa1392030:CDS |
| AGGTACCATAGGCACTTTGA+CGG | 0.533408 | tig0021468:+46083 | None:intergenic |
| CTTGCTAGCCGGACTAGTGG+GGG | 0.535517 | tig0021468:+46607 | None:intergenic |
| AATTTGTGGAAAGCCTTCGA+TGG | 0.535645 | tig0021468:-47963 | Msa1392030:CDS |
| CTGAGCATCTTCTATTCGCT+GGG | 0.537805 | tig0021468:-47693 | Msa1392030:CDS |
| AAAGGAAACTGTACCCAACC+AGG | 0.539875 | tig0021468:-47285 | Msa1392030:CDS |
| TATATTATAGCAATCGCGCT+TGG | 0.540160 | tig0021468:+45901 | None:intergenic |
| ACTTGCTAGCCGGACTAGTG+GGG | 0.540175 | tig0021468:+46606 | None:intergenic |
| GGTCTGGTATGAGAAGTTAT+GGG | 0.541884 | tig0021468:-47837 | Msa1392030:CDS |
| AGGCACTTTGACGGCGAAAG+CGG | 0.545031 | tig0021468:+46092 | None:intergenic |
| TTTCGCCGTCAAAGTGCCTA+TGG | 0.548155 | tig0021468:-46088 | Msa1392030:CDS |
| ACCATTATTATAGGGGTATG+GGG | 0.550253 | tig0021468:-46297 | Msa1392030:CDS |
| AATAGTCACCAGATTCATAT+GGG | 0.550546 | tig0021468:+45816 | None:intergenic |
| CAAATATGAACAGGTACCAT+AGG | 0.552504 | tig0021468:+46072 | None:intergenic |
| TATAATAATGGTAGAGTAAG+GGG | 0.556711 | tig0021468:+46308 | None:intergenic |
| GCGCCGCTCACTAAATTCTG+TGG | 0.557549 | tig0021468:+46143 | None:intergenic |
| TCACTTGCTAGCCGGACTAG+TGG | 0.559513 | tig0021468:+46604 | None:intergenic |
| TTACTCTACCATTATTATAG+GGG | 0.559727 | tig0021468:-46304 | Msa1392030:CDS |
| AGACCCGAGTAGGCGGGTCG+AGG | 0.560372 | tig0021468:+47449 | None:intergenic |
| GAATTCGGGTAACGGCTACA+AGG | 0.560848 | tig0021468:-47317 | Msa1392030:CDS |
| TTCGAGACAAAGAAAGATCA+AGG | 0.562592 | tig0021468:-46274 | Msa1392030:CDS |
| CTATAATAATGGTAGAGTAA+GGG | 0.563231 | tig0021468:+46307 | None:intergenic |
| CGGAATTTACCGGTGGTGGT+TGG | 0.567298 | tig0021468:+46342 | None:intergenic |
| CATACAAGACCCGAGTAGGC+GGG | 0.568387 | tig0021468:+47443 | None:intergenic |
| GGACCTCGACCCGCCTACTC+GGG | 0.570578 | tig0021468:-47452 | Msa1392030:CDS |
| TCCTCGTCAAGTCAGTTTGG+GGG | 0.571092 | tig0021468:-47358 | Msa1392030:CDS |
| GGAATAATGCTTCCTAGCAC+GGG | 0.573690 | tig0021468:+48108 | None:intergenic |
| TCTTGTATGGATATGCAGGA+AGG | 0.574500 | tig0021468:-47429 | Msa1392030:CDS |
| GAATGCTATTCTGATCTAAG+TGG | 0.575738 | tig0021468:-48144 | Msa1392030:CDS |
| AAACTGTACCCAACCAGGGA+TGG | 0.578580 | tig0021468:-47280 | Msa1392030:CDS |
| CGAATTGTATCCGAGGAACA+GGG | 0.581643 | tig0021468:+48007 | None:intergenic |
| TGGTATGTTTAGTCGGGCGG+CGG | 0.583973 | tig0021468:-45794 | Msa1392030:CDS |
| CTTGTATGGATATGCAGGAA+GGG | 0.585103 | tig0021468:-47428 | Msa1392030:CDS |
| GAGCTTCGACCAACCACCAC+CGG | 0.587855 | tig0021468:-46351 | Msa1392030:CDS |
| GAACAATGCAGCTTGCGTTG+CGG | 0.589240 | tig0021468:+46532 | None:intergenic |
| TTGTATGGATATGCAGGAAG+GGG | 0.591527 | tig0021468:-47427 | Msa1392030:CDS |
| AGGATCCAGCATGCGGAACA+CGG | 0.595698 | tig0021468:+47768 | None:intergenic |
| ACTTGCGCGAATTCGGGTAA+CGG | 0.596244 | tig0021468:-47325 | Msa1392030:CDS |
| AAGATCGATCTGTCTTGAAG+TGG | 0.597753 | tig0021468:+45867 | None:intergenic |
| AGAACCGCTCACTTGCTAGC+CGG | 0.598516 | tig0021468:+46596 | None:intergenic |
| TAATGATATTTGTAAATCGG+CGG | 0.599948 | tig0021468:+46167 | None:intergenic |
| ACTGCACAAGGCCCCTGCAG+AGG | 0.601152 | tig0021468:+47659 | None:intergenic |
| CCATACAAGACCCGAGTAGG+CGG | 0.603893 | tig0021468:+47442 | None:intergenic |
| CAGATTCATATGGGCTACTG+AGG | 0.606327 | tig0021468:+45825 | None:intergenic |
| TTTCATAAGGAAGCCATCGA+AGG | 0.606479 | tig0021468:+47950 | None:intergenic |
| AGGAATTCCTGCCAAGATGA+CGG | 0.610085 | tig0021468:+46011 | None:intergenic |
| GGAAGAACATAGAATAGTAG+AGG | 0.611660 | tig0021468:+47748 | None:intergenic |
| AGTGTTGCTTCGGGAAACAT+GGG | 0.614943 | tig0021468:+45949 | None:intergenic |
| CACCGGTAAATTCCGCTTTG+GGG | 0.616016 | tig0021468:-46334 | Msa1392030:CDS |
| GCGCTTGGAGTATAAATGAA+AGG | 0.616251 | tig0021468:+45916 | None:intergenic |
| GATCTGTCTTGAAGTGGTCA+AGG | 0.616297 | tig0021468:+45873 | None:intergenic |
| TTGCTAGCCGGACTAGTGGG+GGG | 0.617577 | tig0021468:+46608 | None:intergenic |
| GTGCTCCTAGGTGTGTGTAG+GGG | 0.617803 | tig0021468:-47405 | Msa1392030:CDS |
| CCTCGTCAAGTCAGTTTGGG+GGG | 0.618208 | tig0021468:-47357 | Msa1392030:CDS |
| TATCCATACAAGACCCGAGT+AGG | 0.623672 | tig0021468:+47439 | None:intergenic |
| CACAGACCAATCAATCGTAT+CGG | 0.634378 | tig0021468:+48057 | None:intergenic |
| TGGAGTATAAATGAAAGGAG+TGG | 0.637579 | tig0021468:+45921 | None:intergenic |
| GTTACCCGAAGCTCATGTAG+AGG | 0.641294 | tig0021468:-46049 | Msa1392030:CDS |
| AATTCGGGTAACGGCTACAA+GGG | 0.641669 | tig0021468:-47316 | Msa1392030:CDS |
| TATTGGTATGTTTAGTCGGG+CGG | 0.648004 | tig0021468:-45797 | Msa1392030:CDS |
| CACAACCCCTACACACACCT+AGG | 0.648185 | tig0021468:+47400 | None:intergenic |
| AAGATGACGGATCCTGCCGT+AGG | 0.649707 | tig0021468:+46024 | None:intergenic |
| CCCAAAGCGGAATTTACCGG+TGG | 0.658272 | tig0021468:+46335 | None:intergenic |
| GTGCTAATCCCTATGTTGTG+CGG | 0.673804 | tig0021468:-47718 | Msa1392030:CDS |
| GAAGGATCGAATTGTATCCG+AGG | 0.679970 | tig0021468:+48000 | None:intergenic |
| ATAGTAGAGGATCCAGCATG+CGG | 0.689131 | tig0021468:+47761 | None:intergenic |
| GAATTGTATCCGAGGAACAG+GGG | 0.689498 | tig0021468:+48008 | None:intergenic |
| AAGGAAACTGTACCCAACCA+GGG | 0.689748 | tig0021468:-47284 | Msa1392030:CDS |
| AATAATGGTAGAGTAAGGGG+TGG | 0.693054 | tig0021468:+46311 | None:intergenic |
| TAACCACAGAATTTAGTGAG+CGG | 0.697275 | tig0021468:-46146 | Msa1392030:CDS |
| AGTAAGGGGTGGCCCCAAAG+CGG | 0.715029 | tig0021468:+46322 | None:intergenic |
| TAGTCCGGCTAGCAAGTGAG+CGG | 0.719772 | tig0021468:-46600 | Msa1392030:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTCCAAATTAAATAAAAAAG+GGG | + | tig0021468:47237-47256 | None:intergenic | 15.0% |
| !! | CTTCCAAATTAAATAAAAAA+GGG | + | tig0021468:47238-47257 | None:intergenic | 15.0% |
| !! | TCTTCCAAATTAAATAAAAA+AGG | + | tig0021468:47239-47258 | None:intergenic | 15.0% |
| !!! | TTTTTATTTAATTTGGAAGA+CGG | - | tig0021468:47239-47258 | Msa1392030:intron | 15.0% |
| !! | TTCCAAATTAAATAAAAAAG+GGG | + | tig0021468:47237-47256 | None:intergenic | 15.0% |
| !! | CTTCCAAATTAAATAAAAAA+GGG | + | tig0021468:47238-47257 | None:intergenic | 15.0% |
| !! | TCTTCCAAATTAAATAAAAA+AGG | + | tig0021468:47239-47258 | None:intergenic | 15.0% |
| !!! | TTTTTATTTAATTTGGAAGA+CGG | - | tig0021468:47239-47258 | Msa1392030:intron | 15.0% |
| !! | ATACAAAAAAGTAATAAGAG+AGG | + | tig0021468:45892-45911 | None:intergenic | 20.0% |
| !!! | TGAAAATTGATGTTTTCATA+AGG | + | tig0021468:45987-46006 | None:intergenic | 20.0% |
| !!! | TGAAAACATCAATTTTCATT+TGG | - | tig0021468:45989-46008 | Msa1392030:CDS | 20.0% |
| !!! | GAAAACATCAATTTTCATTT+GGG | - | tig0021468:45990-46009 | Msa1392030:CDS | 20.0% |
| !! | ATTGGGAAAAAAAAACAAAT+TGG | - | tig0021468:47042-47061 | Msa1392030:intron | 20.0% |
| !!! | TTCCCCTTTTTTATTTAATT+TGG | - | tig0021468:47232-47251 | Msa1392030:intron | 20.0% |
| !!! | TTTTATTTAATTTGGAAGAC+GGG | - | tig0021468:47240-47259 | Msa1392030:intron | 20.0% |
| !!! | TTTTTCCTTTATACTTTACT+TGG | - | tig0021468:47681-47700 | Msa1392030:CDS | 20.0% |
| !! | GGTTAATGATATTTGTAAAT+CGG | + | tig0021468:47760-47779 | None:intergenic | 20.0% |
| !! | ATACAAAAAAGTAATAAGAG+AGG | + | tig0021468:45892-45911 | None:intergenic | 20.0% |
| !!! | TGAAAATTGATGTTTTCATA+AGG | + | tig0021468:45987-46006 | None:intergenic | 20.0% |
| !!! | TGAAAACATCAATTTTCATT+TGG | - | tig0021468:45989-46008 | Msa1392030:CDS | 20.0% |
| !!! | GAAAACATCAATTTTCATTT+GGG | - | tig0021468:45990-46009 | Msa1392030:CDS | 20.0% |
| !! | ATTGGGAAAAAAAAACAAAT+TGG | - | tig0021468:47042-47061 | Msa1392030:intron | 20.0% |
| !!! | TTCCCCTTTTTTATTTAATT+TGG | - | tig0021468:47232-47251 | Msa1392030:intron | 20.0% |
| !!! | TTTTATTTAATTTGGAAGAC+GGG | - | tig0021468:47240-47259 | Msa1392030:intron | 20.0% |
| !!! | TTTTTCCTTTATACTTTACT+TGG | - | tig0021468:47681-47700 | Msa1392030:CDS | 20.0% |
| !! | GGTTAATGATATTTGTAAAT+CGG | + | tig0021468:47760-47779 | None:intergenic | 20.0% |
| !! | AATTTTCATTTGGGTATAGA+CGG | - | tig0021468:45999-46018 | Msa1392030:CDS | 25.0% |
| !!! | ATCCCTATTTGTATTTTAGT+GGG | - | tig0021468:46059-46078 | Msa1392030:CDS | 25.0% |
| ! | AACCCACTAAAATACAAATA+GGG | + | tig0021468:46064-46083 | None:intergenic | 25.0% |
| !!! | TTTTTTTTCACAATAAGACC+TGG | + | tig0021468:46705-46724 | None:intergenic | 25.0% |
| !!! | CATTTCCTTTTTTTTTAAGG+GGG | + | tig0021468:46892-46911 | None:intergenic | 25.0% |
| !!! | GCATTTCCTTTTTTTTTAAG+GGG | + | tig0021468:46893-46912 | None:intergenic | 25.0% |
| !!! | CGCATTTCCTTTTTTTTTAA+GGG | + | tig0021468:46894-46913 | None:intergenic | 25.0% |
| ! | CCTTAAAAAAAAAGGAAATG+CGG | - | tig0021468:46892-46911 | Msa1392030:intron | 25.0% |
| ! | CTTAAAAAAAAAGGAAATGC+GGG | - | tig0021468:46893-46912 | Msa1392030:intron | 25.0% |
| !! | TCTTATCTGAATCTTTAAGA+CGG | + | tig0021468:46956-46975 | None:intergenic | 25.0% |
| !! | AAGTAATAGCCTTTCTTTTA+TGG | + | tig0021468:47118-47137 | None:intergenic | 25.0% |
| ! | TAATATACATGCATAGATAG+TGG | - | tig0021468:47451-47470 | Msa1392030:CDS | 25.0% |
| ! | TATAATAATGGTAGAGTAAG+GGG | + | tig0021468:47616-47635 | None:intergenic | 25.0% |
| ! | CTATAATAATGGTAGAGTAA+GGG | + | tig0021468:47617-47636 | None:intergenic | 25.0% |
| ! | CTTACTCTACCATTATTATA+GGG | - | tig0021468:47616-47635 | Msa1392030:intron | 25.0% |
| ! | TTACTCTACCATTATTATAG+GGG | - | tig0021468:47617-47636 | Msa1392030:intron | 25.0% |
| ! | TAATGATATTTGTAAATCGG+CGG | + | tig0021468:47757-47776 | None:intergenic | 25.0% |
| !! | AATTTTCATTTGGGTATAGA+CGG | - | tig0021468:45999-46018 | Msa1392030:CDS | 25.0% |
| !!! | ATCCCTATTTGTATTTTAGT+GGG | - | tig0021468:46059-46078 | Msa1392030:CDS | 25.0% |
| ! | AACCCACTAAAATACAAATA+GGG | + | tig0021468:46064-46083 | None:intergenic | 25.0% |
| !!! | TTTTTTTTCACAATAAGACC+TGG | + | tig0021468:46705-46724 | None:intergenic | 25.0% |
| !!! | CATTTCCTTTTTTTTTAAGG+GGG | + | tig0021468:46892-46911 | None:intergenic | 25.0% |
| !!! | GCATTTCCTTTTTTTTTAAG+GGG | + | tig0021468:46893-46912 | None:intergenic | 25.0% |
| !!! | CGCATTTCCTTTTTTTTTAA+GGG | + | tig0021468:46894-46913 | None:intergenic | 25.0% |
| ! | CCTTAAAAAAAAAGGAAATG+CGG | - | tig0021468:46892-46911 | Msa1392030:intron | 25.0% |
| ! | CTTAAAAAAAAAGGAAATGC+GGG | - | tig0021468:46893-46912 | Msa1392030:intron | 25.0% |
| !! | TCTTATCTGAATCTTTAAGA+CGG | + | tig0021468:46956-46975 | None:intergenic | 25.0% |
| !! | AAGTAATAGCCTTTCTTTTA+TGG | + | tig0021468:47118-47137 | None:intergenic | 25.0% |
| ! | TAATATACATGCATAGATAG+TGG | - | tig0021468:47451-47470 | Msa1392030:CDS | 25.0% |
| ! | TATAATAATGGTAGAGTAAG+GGG | + | tig0021468:47616-47635 | None:intergenic | 25.0% |
| ! | CTATAATAATGGTAGAGTAA+GGG | + | tig0021468:47617-47636 | None:intergenic | 25.0% |
| ! | CTTACTCTACCATTATTATA+GGG | - | tig0021468:47616-47635 | Msa1392030:intron | 25.0% |
| ! | TTACTCTACCATTATTATAG+GGG | - | tig0021468:47617-47636 | Msa1392030:intron | 25.0% |
| ! | TAATGATATTTGTAAATCGG+CGG | + | tig0021468:47757-47776 | None:intergenic | 25.0% |
| ! | CTTGAATTTGGAATGAAAAG+AGG | + | tig0021468:45837-45856 | None:intergenic | 30.0% |
| !! | GATCCCTATTTGTATTTTAG+TGG | - | tig0021468:46058-46077 | Msa1392030:CDS | 30.0% |
| CAACCCACTAAAATACAAAT+AGG | + | tig0021468:46065-46084 | None:intergenic | 30.0% | |
| !!! | CTATTTGTATTTTAGTGGGT+TGG | - | tig0021468:46063-46082 | Msa1392030:CDS | 30.0% |
| ! | AGACACATCTTTTTCCTTTT+GGG | - | tig0021468:46417-46436 | Msa1392030:intron | 30.0% |
| !!! | TGTTTTAGCAACTTATCCTA+AGG | + | tig0021468:46792-46811 | None:intergenic | 30.0% |
| GGATAAGTTGCTAAAACAAA+CGG | - | tig0021468:46794-46813 | Msa1392030:intron | 30.0% | |
| GATAAGTTGCTAAAACAAAC+GGG | - | tig0021468:46795-46814 | Msa1392030:intron | 30.0% | |
| !!! | CCGCATTTCCTTTTTTTTTA+AGG | + | tig0021468:46895-46914 | None:intergenic | 30.0% |
| !! | CTTATCTGAATCTTTAAGAC+GGG | + | tig0021468:46955-46974 | None:intergenic | 30.0% |
| !!! | TTTTTTTTTCCCAATTCTCC+TGG | + | tig0021468:47037-47056 | None:intergenic | 30.0% |
| ATAAAAAAGGGGAAGAAAGA+TGG | + | tig0021468:47226-47245 | None:intergenic | 30.0% | |
| CCTATAATAATGGTAGAGTA+AGG | + | tig0021468:47618-47637 | None:intergenic | 30.0% | |
| CCTTACTCTACCATTATTAT+AGG | - | tig0021468:47615-47634 | Msa1392030:intron | 30.0% | |
| ! | TACCATTATTATAGGGGTAT+GGG | - | tig0021468:47623-47642 | Msa1392030:intron | 30.0% |
| CAGATCCAAGTAAAGTATAA+AGG | + | tig0021468:47689-47708 | None:intergenic | 30.0% | |
| !!! | TGTTGATTCTTTTCCAAACA+GGG | - | tig0021468:47730-47749 | Msa1392030:CDS | 30.0% |
| AAGCAATCCATAGAAAGATT+TGG | + | tig0021468:47803-47822 | None:intergenic | 30.0% | |
| TGAAAATCTTAAAAACCCGT+GGG | + | tig0021468:47949-47968 | None:intergenic | 30.0% | |
| TTGAAAATCTTAAAAACCCG+TGG | + | tig0021468:47950-47969 | None:intergenic | 30.0% | |
| AATAGTCACCAGATTCATAT+GGG | + | tig0021468:48108-48127 | None:intergenic | 30.0% | |
| TGACTATTGGTATGTTTAGT+CGG | - | tig0021468:48120-48139 | Msa1392030:CDS | 30.0% | |
| ACTAAAAATAGGTGACCTAA+CGG | + | tig0021468:48153-48172 | None:intergenic | 30.0% | |
| ! | CTTGAATTTGGAATGAAAAG+AGG | + | tig0021468:45837-45856 | None:intergenic | 30.0% |
| !! | GATCCCTATTTGTATTTTAG+TGG | - | tig0021468:46058-46077 | Msa1392030:CDS | 30.0% |
| CAACCCACTAAAATACAAAT+AGG | + | tig0021468:46065-46084 | None:intergenic | 30.0% | |
| !!! | CTATTTGTATTTTAGTGGGT+TGG | - | tig0021468:46063-46082 | Msa1392030:CDS | 30.0% |
| ! | AGACACATCTTTTTCCTTTT+GGG | - | tig0021468:46417-46436 | Msa1392030:intron | 30.0% |
| !!! | TGTTTTAGCAACTTATCCTA+AGG | + | tig0021468:46792-46811 | None:intergenic | 30.0% |
| GGATAAGTTGCTAAAACAAA+CGG | - | tig0021468:46794-46813 | Msa1392030:intron | 30.0% | |
| GATAAGTTGCTAAAACAAAC+GGG | - | tig0021468:46795-46814 | Msa1392030:intron | 30.0% | |
| !!! | CCGCATTTCCTTTTTTTTTA+AGG | + | tig0021468:46895-46914 | None:intergenic | 30.0% |
| !! | CTTATCTGAATCTTTAAGAC+GGG | + | tig0021468:46955-46974 | None:intergenic | 30.0% |
| !!! | TTTTTTTTTCCCAATTCTCC+TGG | + | tig0021468:47037-47056 | None:intergenic | 30.0% |
| ATAAAAAAGGGGAAGAAAGA+TGG | + | tig0021468:47226-47245 | None:intergenic | 30.0% | |
| CCTATAATAATGGTAGAGTA+AGG | + | tig0021468:47618-47637 | None:intergenic | 30.0% | |
| CCTTACTCTACCATTATTAT+AGG | - | tig0021468:47615-47634 | Msa1392030:intron | 30.0% | |
| ! | TACCATTATTATAGGGGTAT+GGG | - | tig0021468:47623-47642 | Msa1392030:intron | 30.0% |
| CAGATCCAAGTAAAGTATAA+AGG | + | tig0021468:47689-47708 | None:intergenic | 30.0% | |
| !!! | TGTTGATTCTTTTCCAAACA+GGG | - | tig0021468:47730-47749 | Msa1392030:CDS | 30.0% |
| AAGCAATCCATAGAAAGATT+TGG | + | tig0021468:47803-47822 | None:intergenic | 30.0% | |
| TGAAAATCTTAAAAACCCGT+GGG | + | tig0021468:47949-47968 | None:intergenic | 30.0% | |
| TTGAAAATCTTAAAAACCCG+TGG | + | tig0021468:47950-47969 | None:intergenic | 30.0% | |
| AATAGTCACCAGATTCATAT+GGG | + | tig0021468:48108-48127 | None:intergenic | 30.0% | |
| TGACTATTGGTATGTTTAGT+CGG | - | tig0021468:48120-48139 | Msa1392030:CDS | 30.0% | |
| ACTAAAAATAGGTGACCTAA+CGG | + | tig0021468:48153-48172 | None:intergenic | 30.0% | |
| GAATGCTATTCTGATCTAAG+TGG | - | tig0021468:45777-45796 | Msa1392030:CDS | 35.0% | |
| ATCGGTCGTATTCTTGAATT+TGG | + | tig0021468:45849-45868 | None:intergenic | 35.0% | |
| GATACAATTCGATCCTTCTA+CGG | - | tig0021468:45926-45945 | Msa1392030:CDS | 35.0% | |
| GCTTTCCACAAATTGAGATT+TGG | + | tig0021468:45952-45971 | None:intergenic | 35.0% | |
| ACAAATAGGGATCAGAAATG+TGG | + | tig0021468:46051-46070 | None:intergenic | 35.0% | |
| GGAAGAACATAGAATAGTAG+AGG | + | tig0021468:46176-46195 | None:intergenic | 35.0% | |
| ! | CAGACACATCTTTTTCCTTT+TGG | - | tig0021468:46416-46435 | Msa1392030:intron | 35.0% |
| !! | ACATCTTTTTCCTTTTGGGA+GGG | - | tig0021468:46421-46440 | Msa1392030:intron | 35.0% |
| TTCTTCGGAATTCTACTGAA+CGG | + | tig0021468:46835-46854 | None:intergenic | 35.0% | |
| TTTGGCCCCCTTAAAAAAAA+AGG | - | tig0021468:46884-46903 | Msa1392030:intron | 35.0% | |
| ATCTCTCTCTCTAGATATCT+AGG | - | tig0021468:47142-47161 | Msa1392030:intron | 35.0% | |
| TCTCTCTCTCTAGATATCTA+GGG | - | tig0021468:47143-47162 | Msa1392030:intron | 35.0% | |
| ! | TCTCGAATCTTTTGCTTATC+GGG | + | tig0021468:47422-47441 | None:intergenic | 35.0% |
| ! | CTCTCGAATCTTTTGCTTAT+CGG | + | tig0021468:47423-47442 | None:intergenic | 35.0% |
| CTATGCATGTATATTAAGCC+TGG | + | tig0021468:47447-47466 | None:intergenic | 35.0% | |
| ! | TAGATAGTGGTCTAATGACA+AGG | - | tig0021468:47464-47483 | Msa1392030:intron | 35.0% |
| ! | AGATAGTGGTCTAATGACAA+GGG | - | tig0021468:47465-47484 | Msa1392030:intron | 35.0% |
| CTACCATTATTATAGGGGTA+TGG | - | tig0021468:47622-47641 | Msa1392030:intron | 35.0% | |
| ! | ACCATTATTATAGGGGTATG+GGG | - | tig0021468:47624-47643 | Msa1392030:intron | 35.0% |
| TTCGAGACAAAGAAAGATCA+AGG | - | tig0021468:47647-47666 | Msa1392030:intron | 35.0% | |
| !!! | CTGTTGATTCTTTTCCAAAC+AGG | - | tig0021468:47729-47748 | Msa1392030:CDS | 35.0% |
| TAACCACAGAATTTAGTGAG+CGG | - | tig0021468:47775-47794 | Msa1392030:CDS | 35.0% | |
| CAAATATGAACAGGTACCAT+AGG | + | tig0021468:47852-47871 | None:intergenic | 35.0% | |
| CTATGGTACCTGTTCATATT+TGG | - | tig0021468:47850-47869 | Msa1392030:intron | 35.0% | |
| GCAGGAATTCCTTCAAAATT+GGG | - | tig0021468:47921-47940 | Msa1392030:intron | 35.0% | |
| TGGAGTATAAATGAAAGGAG+TGG | + | tig0021468:48003-48022 | None:intergenic | 35.0% | |
| TATATTATAGCAATCGCGCT+TGG | + | tig0021468:48023-48042 | None:intergenic | 35.0% | |
| CAATAGTCACCAGATTCATA+TGG | + | tig0021468:48109-48128 | None:intergenic | 35.0% | |
| CATATGAATCTGGTGACTAT+TGG | - | tig0021468:48107-48126 | Msa1392030:CDS | 35.0% | |
| GACTATTGGTATGTTTAGTC+GGG | - | tig0021468:48121-48140 | Msa1392030:CDS | 35.0% | |
| GAATGCTATTCTGATCTAAG+TGG | - | tig0021468:45777-45796 | Msa1392030:CDS | 35.0% | |
| ATCGGTCGTATTCTTGAATT+TGG | + | tig0021468:45849-45868 | None:intergenic | 35.0% | |
| GATACAATTCGATCCTTCTA+CGG | - | tig0021468:45926-45945 | Msa1392030:CDS | 35.0% | |
| GCTTTCCACAAATTGAGATT+TGG | + | tig0021468:45952-45971 | None:intergenic | 35.0% | |
| ACAAATAGGGATCAGAAATG+TGG | + | tig0021468:46051-46070 | None:intergenic | 35.0% | |
| GGAAGAACATAGAATAGTAG+AGG | + | tig0021468:46176-46195 | None:intergenic | 35.0% | |
| ! | CAGACACATCTTTTTCCTTT+TGG | - | tig0021468:46416-46435 | Msa1392030:intron | 35.0% |
| !! | ACATCTTTTTCCTTTTGGGA+GGG | - | tig0021468:46421-46440 | Msa1392030:intron | 35.0% |
| TTCTTCGGAATTCTACTGAA+CGG | + | tig0021468:46835-46854 | None:intergenic | 35.0% | |
| TTTGGCCCCCTTAAAAAAAA+AGG | - | tig0021468:46884-46903 | Msa1392030:intron | 35.0% | |
| ATCTCTCTCTCTAGATATCT+AGG | - | tig0021468:47142-47161 | Msa1392030:intron | 35.0% | |
| TCTCTCTCTCTAGATATCTA+GGG | - | tig0021468:47143-47162 | Msa1392030:intron | 35.0% | |
| ! | TCTCGAATCTTTTGCTTATC+GGG | + | tig0021468:47422-47441 | None:intergenic | 35.0% |
| ! | CTCTCGAATCTTTTGCTTAT+CGG | + | tig0021468:47423-47442 | None:intergenic | 35.0% |
| CTATGCATGTATATTAAGCC+TGG | + | tig0021468:47447-47466 | None:intergenic | 35.0% | |
| ! | TAGATAGTGGTCTAATGACA+AGG | - | tig0021468:47464-47483 | Msa1392030:intron | 35.0% |
| ! | AGATAGTGGTCTAATGACAA+GGG | - | tig0021468:47465-47484 | Msa1392030:intron | 35.0% |
| CTACCATTATTATAGGGGTA+TGG | - | tig0021468:47622-47641 | Msa1392030:intron | 35.0% | |
| ! | ACCATTATTATAGGGGTATG+GGG | - | tig0021468:47624-47643 | Msa1392030:intron | 35.0% |
| TTCGAGACAAAGAAAGATCA+AGG | - | tig0021468:47647-47666 | Msa1392030:intron | 35.0% | |
| !!! | CTGTTGATTCTTTTCCAAAC+AGG | - | tig0021468:47729-47748 | Msa1392030:CDS | 35.0% |
| TAACCACAGAATTTAGTGAG+CGG | - | tig0021468:47775-47794 | Msa1392030:CDS | 35.0% | |
| CAAATATGAACAGGTACCAT+AGG | + | tig0021468:47852-47871 | None:intergenic | 35.0% | |
| CTATGGTACCTGTTCATATT+TGG | - | tig0021468:47850-47869 | Msa1392030:intron | 35.0% | |
| GCAGGAATTCCTTCAAAATT+GGG | - | tig0021468:47921-47940 | Msa1392030:intron | 35.0% | |
| TGGAGTATAAATGAAAGGAG+TGG | + | tig0021468:48003-48022 | None:intergenic | 35.0% | |
| TATATTATAGCAATCGCGCT+TGG | + | tig0021468:48023-48042 | None:intergenic | 35.0% | |
| CAATAGTCACCAGATTCATA+TGG | + | tig0021468:48109-48128 | None:intergenic | 35.0% | |
| CATATGAATCTGGTGACTAT+TGG | - | tig0021468:48107-48126 | Msa1392030:CDS | 35.0% | |
| GACTATTGGTATGTTTAGTC+GGG | - | tig0021468:48121-48140 | Msa1392030:CDS | 35.0% | |
| AGGAATAATGCTTCCTAGCA+CGG | + | tig0021468:45817-45836 | None:intergenic | 40.0% | |
| ATACGACCGATACGATTGAT+TGG | - | tig0021468:45858-45877 | Msa1392030:CDS | 40.0% | |
| CACAGACCAATCAATCGTAT+CGG | + | tig0021468:45867-45886 | None:intergenic | 40.0% | |
| ! | TTTTGTATTCCCCTGTTCCT+CGG | - | tig0021468:45904-45923 | Msa1392030:CDS | 40.0% |
| AATTGAGATTTGGCCGTAGA+AGG | + | tig0021468:45942-45961 | None:intergenic | 40.0% | |
| TACGGCCAAATCTCAATTTG+TGG | - | tig0021468:45944-45963 | Msa1392030:CDS | 40.0% | |
| AATTTGTGGAAAGCCTTCGA+TGG | - | tig0021468:45958-45977 | Msa1392030:CDS | 40.0% | |
| TTTCATAAGGAAGCCATCGA+AGG | + | tig0021468:45974-45993 | None:intergenic | 40.0% | |
| !!! | TGTATTTTAGTGGGTTGGTC+TGG | - | tig0021468:46068-46087 | Msa1392030:CDS | 40.0% |
| TGGTCTGGTATGAGAAGTTA+TGG | - | tig0021468:46083-46102 | Msa1392030:CDS | 40.0% | |
| GGTCTGGTATGAGAAGTTAT+GGG | - | tig0021468:46084-46103 | Msa1392030:CDS | 40.0% | |
| ! | GATAAAGCTTTTCCTCTGCA+GGG | - | tig0021468:46250-46269 | Msa1392030:CDS | 40.0% |
| ! | ATAAAGCTTTTCCTCTGCAG+GGG | - | tig0021468:46251-46270 | Msa1392030:CDS | 40.0% |
| AAAGATGTGTCTGTCAGGTT+CGG | + | tig0021468:46409-46428 | None:intergenic | 40.0% | |
| AGGAAAAAGATGTGTCTGTC+AGG | + | tig0021468:46414-46433 | None:intergenic | 40.0% | |
| ! | CACATCTTTTTCCTTTTGGG+AGG | - | tig0021468:46420-46439 | Msa1392030:intron | 40.0% |
| TCTTGTATGGATATGCAGGA+AGG | - | tig0021468:46492-46511 | Msa1392030:intron | 40.0% | |
| CTTGTATGGATATGCAGGAA+GGG | - | tig0021468:46493-46512 | Msa1392030:intron | 40.0% | |
| TTGTATGGATATGCAGGAAG+GGG | - | tig0021468:46494-46513 | Msa1392030:intron | 40.0% | |
| ATTCCTCGTCAAGTCAGTTT+GGG | - | tig0021468:46561-46580 | Msa1392030:CDS | 40.0% | |
| GCTACAAGGGAAAAATCGAA+AGG | - | tig0021468:46618-46637 | Msa1392030:intron | 40.0% | |
| AAGTTGCTAAAACAAACGGG+AGG | - | tig0021468:46798-46817 | Msa1392030:intron | 40.0% | |
| AGTTGCTAAAACAAACGGGA+GGG | - | tig0021468:46799-46818 | Msa1392030:intron | 40.0% | |
| TCTTCGGAATTCTACTGAAC+GGG | + | tig0021468:46834-46853 | None:intergenic | 40.0% | |
| GAATTCCGAAGAAAGACTGT+TGG | - | tig0021468:46842-46861 | Msa1392030:intron | 40.0% | |
| AAAAAAAAGGAAATGCGGGC+AGG | - | tig0021468:46897-46916 | Msa1392030:intron | 40.0% | |
| AAAAAAAGGAAATGCGGGCA+GGG | - | tig0021468:46898-46917 | Msa1392030:intron | 40.0% | |
| AAGGTGCATGCATAAAGGTT+TGG | + | tig0021468:46987-47006 | None:intergenic | 40.0% | |
| ! | ATACGAAGGTGCATGCATAA+AGG | + | tig0021468:46992-47011 | None:intergenic | 40.0% |
| TGTATGCAGCACTTATACGA+AGG | + | tig0021468:47006-47025 | None:intergenic | 40.0% | |
| ! | TAAGTGCTGCATACAAGTTC+CGG | - | tig0021468:47011-47030 | Msa1392030:intron | 40.0% |
| TACTACTACTGTGATGTGAG+CGG | + | tig0021468:47070-47089 | None:intergenic | 40.0% | |
| ! | CATGGTTTTCAGTATGTCTC+CGG | - | tig0021468:47284-47303 | Msa1392030:CDS | 40.0% |
| ! | TTTTCAGTATGTCTCCGGAT+AGG | - | tig0021468:47289-47308 | Msa1392030:CDS | 40.0% |
| TTTCAGTATGTCTCCGGATA+GGG | - | tig0021468:47290-47309 | Msa1392030:CDS | 40.0% | |
| AATAATGGTAGAGTAAGGGG+TGG | + | tig0021468:47613-47632 | None:intergenic | 40.0% | |
| ACCCCATACCCCTATAATAA+TGG | + | tig0021468:47628-47647 | None:intergenic | 40.0% | |
| TCGGGTAACCAAATATGAAC+AGG | + | tig0021468:47861-47880 | None:intergenic | 40.0% | |
| GGCAGGAATTCCTTCAAAAT+TGG | - | tig0021468:47920-47939 | Msa1392030:intron | 40.0% | |
| !! | AGTGGAACAAAGTGTTGCTT+CGG | + | tig0021468:47985-48004 | None:intergenic | 40.0% |
| GCGCTTGGAGTATAAATGAA+AGG | + | tig0021468:48008-48027 | None:intergenic | 40.0% | |
| AAGATCGATCTGTCTTGAAG+TGG | + | tig0021468:48057-48076 | None:intergenic | 40.0% | |
| TATTGGTATGTTTAGTCGGG+CGG | - | tig0021468:48124-48143 | Msa1392030:CDS | 40.0% | |
| AGGAATAATGCTTCCTAGCA+CGG | + | tig0021468:45817-45836 | None:intergenic | 40.0% | |
| ATACGACCGATACGATTGAT+TGG | - | tig0021468:45858-45877 | Msa1392030:CDS | 40.0% | |
| CACAGACCAATCAATCGTAT+CGG | + | tig0021468:45867-45886 | None:intergenic | 40.0% | |
| ! | TTTTGTATTCCCCTGTTCCT+CGG | - | tig0021468:45904-45923 | Msa1392030:CDS | 40.0% |
| AATTGAGATTTGGCCGTAGA+AGG | + | tig0021468:45942-45961 | None:intergenic | 40.0% | |
| TACGGCCAAATCTCAATTTG+TGG | - | tig0021468:45944-45963 | Msa1392030:CDS | 40.0% | |
| AATTTGTGGAAAGCCTTCGA+TGG | - | tig0021468:45958-45977 | Msa1392030:CDS | 40.0% | |
| TTTCATAAGGAAGCCATCGA+AGG | + | tig0021468:45974-45993 | None:intergenic | 40.0% | |
| !!! | TGTATTTTAGTGGGTTGGTC+TGG | - | tig0021468:46068-46087 | Msa1392030:CDS | 40.0% |
| TGGTCTGGTATGAGAAGTTA+TGG | - | tig0021468:46083-46102 | Msa1392030:CDS | 40.0% | |
| GGTCTGGTATGAGAAGTTAT+GGG | - | tig0021468:46084-46103 | Msa1392030:CDS | 40.0% | |
| ! | GATAAAGCTTTTCCTCTGCA+GGG | - | tig0021468:46250-46269 | Msa1392030:CDS | 40.0% |
| ! | ATAAAGCTTTTCCTCTGCAG+GGG | - | tig0021468:46251-46270 | Msa1392030:CDS | 40.0% |
| AAAGATGTGTCTGTCAGGTT+CGG | + | tig0021468:46409-46428 | None:intergenic | 40.0% | |
| AGGAAAAAGATGTGTCTGTC+AGG | + | tig0021468:46414-46433 | None:intergenic | 40.0% | |
| ! | CACATCTTTTTCCTTTTGGG+AGG | - | tig0021468:46420-46439 | Msa1392030:intron | 40.0% |
| TCTTGTATGGATATGCAGGA+AGG | - | tig0021468:46492-46511 | Msa1392030:intron | 40.0% | |
| CTTGTATGGATATGCAGGAA+GGG | - | tig0021468:46493-46512 | Msa1392030:intron | 40.0% | |
| TTGTATGGATATGCAGGAAG+GGG | - | tig0021468:46494-46513 | Msa1392030:intron | 40.0% | |
| ATTCCTCGTCAAGTCAGTTT+GGG | - | tig0021468:46561-46580 | Msa1392030:CDS | 40.0% | |
| GCTACAAGGGAAAAATCGAA+AGG | - | tig0021468:46618-46637 | Msa1392030:intron | 40.0% | |
| AAGTTGCTAAAACAAACGGG+AGG | - | tig0021468:46798-46817 | Msa1392030:intron | 40.0% | |
| AGTTGCTAAAACAAACGGGA+GGG | - | tig0021468:46799-46818 | Msa1392030:intron | 40.0% | |
| TCTTCGGAATTCTACTGAAC+GGG | + | tig0021468:46834-46853 | None:intergenic | 40.0% | |
| GAATTCCGAAGAAAGACTGT+TGG | - | tig0021468:46842-46861 | Msa1392030:intron | 40.0% | |
| AAAAAAAAGGAAATGCGGGC+AGG | - | tig0021468:46897-46916 | Msa1392030:intron | 40.0% | |
| AAAAAAAGGAAATGCGGGCA+GGG | - | tig0021468:46898-46917 | Msa1392030:intron | 40.0% | |
| AAGGTGCATGCATAAAGGTT+TGG | + | tig0021468:46987-47006 | None:intergenic | 40.0% | |
| ! | ATACGAAGGTGCATGCATAA+AGG | + | tig0021468:46992-47011 | None:intergenic | 40.0% |
| TGTATGCAGCACTTATACGA+AGG | + | tig0021468:47006-47025 | None:intergenic | 40.0% | |
| ! | TAAGTGCTGCATACAAGTTC+CGG | - | tig0021468:47011-47030 | Msa1392030:intron | 40.0% |
| TACTACTACTGTGATGTGAG+CGG | + | tig0021468:47070-47089 | None:intergenic | 40.0% | |
| ! | CATGGTTTTCAGTATGTCTC+CGG | - | tig0021468:47284-47303 | Msa1392030:CDS | 40.0% |
| ! | TTTTCAGTATGTCTCCGGAT+AGG | - | tig0021468:47289-47308 | Msa1392030:CDS | 40.0% |
| TTTCAGTATGTCTCCGGATA+GGG | - | tig0021468:47290-47309 | Msa1392030:CDS | 40.0% | |
| AATAATGGTAGAGTAAGGGG+TGG | + | tig0021468:47613-47632 | None:intergenic | 40.0% | |
| ACCCCATACCCCTATAATAA+TGG | + | tig0021468:47628-47647 | None:intergenic | 40.0% | |
| TCGGGTAACCAAATATGAAC+AGG | + | tig0021468:47861-47880 | None:intergenic | 40.0% | |
| GGCAGGAATTCCTTCAAAAT+TGG | - | tig0021468:47920-47939 | Msa1392030:intron | 40.0% | |
| !! | AGTGGAACAAAGTGTTGCTT+CGG | + | tig0021468:47985-48004 | None:intergenic | 40.0% |
| GCGCTTGGAGTATAAATGAA+AGG | + | tig0021468:48008-48027 | None:intergenic | 40.0% | |
| AAGATCGATCTGTCTTGAAG+TGG | + | tig0021468:48057-48076 | None:intergenic | 40.0% | |
| TATTGGTATGTTTAGTCGGG+CGG | - | tig0021468:48124-48143 | Msa1392030:CDS | 40.0% | |
| GGAATAATGCTTCCTAGCAC+GGG | + | tig0021468:45816-45835 | None:intergenic | 45.0% | |
| GAATTGTATCCGAGGAACAG+GGG | + | tig0021468:45916-45935 | None:intergenic | 45.0% | |
| CGAATTGTATCCGAGGAACA+GGG | + | tig0021468:45917-45936 | None:intergenic | 45.0% | |
| TCGAATTGTATCCGAGGAAC+AGG | + | tig0021468:45918-45937 | None:intergenic | 45.0% | |
| GAAGGATCGAATTGTATCCG+AGG | + | tig0021468:45924-45943 | None:intergenic | 45.0% | |
| ATAGTAGAGGATCCAGCATG+CGG | + | tig0021468:46163-46182 | None:intergenic | 45.0% | |
| ! | ATAGGGATTAGCACGCTTTC+GGG | + | tig0021468:46197-46216 | None:intergenic | 45.0% |
| ! | CATAGGGATTAGCACGCTTT+CGG | + | tig0021468:46198-46217 | None:intergenic | 45.0% |
| GTGCTAATCCCTATGTTGTG+CGG | - | tig0021468:46203-46222 | Msa1392030:CDS | 45.0% | |
| CTGAGCATCTTCTATTCGCT+GGG | - | tig0021468:46228-46247 | Msa1392030:CDS | 45.0% | |
| ! | GGATAAAGCTTTTCCTCTGC+AGG | - | tig0021468:46249-46268 | Msa1392030:CDS | 45.0% |
| GTGCGTAAGCATAGCATTTC+TGG | - | tig0021468:46354-46373 | Msa1392030:CDS | 45.0% | |
| ! | AGGTTCGGTTCGTCTTAGTT+GGG | + | tig0021468:46394-46413 | None:intergenic | 45.0% |
| TATCCATACAAGACCCGAGT+AGG | + | tig0021468:46485-46504 | None:intergenic | 45.0% | |
| GTTGTGTTTGTTCGCGAGAA+TGG | - | tig0021468:46538-46557 | Msa1392030:CDS | 45.0% | |
| GATTCCTCGTCAAGTCAGTT+TGG | - | tig0021468:46560-46579 | Msa1392030:CDS | 45.0% | |
| TTCCTCGTCAAGTCAGTTTG+GGG | - | tig0021468:46562-46581 | Msa1392030:CDS | 45.0% | |
| ! | AATTCGGGTAACGGCTACAA+GGG | - | tig0021468:46605-46624 | Msa1392030:CDS | 45.0% |
| AAAGGAAACTGTACCCAACC+AGG | - | tig0021468:46636-46655 | Msa1392030:intron | 45.0% | |
| AAGGAAACTGTACCCAACCA+GGG | - | tig0021468:46637-46656 | Msa1392030:intron | 45.0% | |
| GTAAACTCGTAAGCTACCGA+GGG | - | tig0021468:46666-46685 | Msa1392030:intron | 45.0% | |
| GTTGCTAAAACAAACGGGAG+GGG | - | tig0021468:46800-46819 | Msa1392030:intron | 45.0% | |
| TGCTGCCAACAGTCTTTCTT+CGG | + | tig0021468:46850-46869 | None:intergenic | 45.0% | |
| AGCAGGTGGAGACATTTCTT+TGG | - | tig0021468:46866-46885 | Msa1392030:intron | 45.0% | |
| TCGGTAGAGGGTTCGATAAT+AGG | - | tig0021468:46927-46946 | Msa1392030:intron | 45.0% | |
| CGGTAGAGGGTTCGATAATA+GGG | - | tig0021468:46928-46947 | Msa1392030:intron | 45.0% | |
| ! | TTTTTCCCAATTCTCCTGGC+CGG | + | tig0021468:47033-47052 | None:intergenic | 45.0% |
| AGTAGCGTAAAGCCGTAAGT+CGG | - | tig0021468:47086-47105 | Msa1392030:intron | 45.0% | |
| TAGCAAGTGAGCGGTTCTTT+CGG | - | tig0021468:47330-47349 | Msa1392030:CDS | 45.0% | |
| ! | ATCTTTTGCTTATCGGGTGG+TGG | + | tig0021468:47416-47435 | None:intergenic | 45.0% |
| ! | CGAATCTTTTGCTTATCGGG+TGG | + | tig0021468:47419-47438 | None:intergenic | 45.0% |
| AGCAAAAGATTCGAGAGTCC+AGG | - | tig0021468:47426-47445 | Msa1392030:CDS | 45.0% | |
| CGTGATACTTCCGCATCATA+CGG | + | tig0021468:47516-47535 | None:intergenic | 45.0% | |
| !! | TGATGCGGAAGTATCACGTA+CGG | - | tig0021468:47518-47537 | Msa1392030:intron | 45.0% |
| AGGTACCATAGGCACTTTGA+CGG | + | tig0021468:47841-47860 | None:intergenic | 45.0% | |
| AGGAATTCCTGCCAAGATGA+CGG | + | tig0021468:47913-47932 | None:intergenic | 45.0% | |
| !! | AGTGTTGCTTCGGGAAACAT+GGG | + | tig0021468:47975-47994 | None:intergenic | 45.0% |
| !! | AAGTGTTGCTTCGGGAAACA+TGG | + | tig0021468:47976-47995 | None:intergenic | 45.0% |
| !! | GTGGAACAAAGTGTTGCTTC+GGG | + | tig0021468:47984-48003 | None:intergenic | 45.0% |
| GATCTGTCTTGAAGTGGTCA+AGG | + | tig0021468:48051-48070 | None:intergenic | 45.0% | |
| ! | CAGATTCATATGGGCTACTG+AGG | + | tig0021468:48099-48118 | None:intergenic | 45.0% |
| CTCAGTAGCCCATATGAATC+TGG | - | tig0021468:48097-48116 | Msa1392030:CDS | 45.0% | |
| GGAATAATGCTTCCTAGCAC+GGG | + | tig0021468:45816-45835 | None:intergenic | 45.0% | |
| GAATTGTATCCGAGGAACAG+GGG | + | tig0021468:45916-45935 | None:intergenic | 45.0% | |
| CGAATTGTATCCGAGGAACA+GGG | + | tig0021468:45917-45936 | None:intergenic | 45.0% | |
| TCGAATTGTATCCGAGGAAC+AGG | + | tig0021468:45918-45937 | None:intergenic | 45.0% | |
| GAAGGATCGAATTGTATCCG+AGG | + | tig0021468:45924-45943 | None:intergenic | 45.0% | |
| ATAGTAGAGGATCCAGCATG+CGG | + | tig0021468:46163-46182 | None:intergenic | 45.0% | |
| ! | ATAGGGATTAGCACGCTTTC+GGG | + | tig0021468:46197-46216 | None:intergenic | 45.0% |
| ! | CATAGGGATTAGCACGCTTT+CGG | + | tig0021468:46198-46217 | None:intergenic | 45.0% |
| GTGCTAATCCCTATGTTGTG+CGG | - | tig0021468:46203-46222 | Msa1392030:CDS | 45.0% | |
| CTGAGCATCTTCTATTCGCT+GGG | - | tig0021468:46228-46247 | Msa1392030:CDS | 45.0% | |
| ! | GGATAAAGCTTTTCCTCTGC+AGG | - | tig0021468:46249-46268 | Msa1392030:CDS | 45.0% |
| GTGCGTAAGCATAGCATTTC+TGG | - | tig0021468:46354-46373 | Msa1392030:CDS | 45.0% | |
| ! | AGGTTCGGTTCGTCTTAGTT+GGG | + | tig0021468:46394-46413 | None:intergenic | 45.0% |
| TATCCATACAAGACCCGAGT+AGG | + | tig0021468:46485-46504 | None:intergenic | 45.0% | |
| GTTGTGTTTGTTCGCGAGAA+TGG | - | tig0021468:46538-46557 | Msa1392030:CDS | 45.0% | |
| GATTCCTCGTCAAGTCAGTT+TGG | - | tig0021468:46560-46579 | Msa1392030:CDS | 45.0% | |
| TTCCTCGTCAAGTCAGTTTG+GGG | - | tig0021468:46562-46581 | Msa1392030:CDS | 45.0% | |
| ! | AATTCGGGTAACGGCTACAA+GGG | - | tig0021468:46605-46624 | Msa1392030:CDS | 45.0% |
| AAAGGAAACTGTACCCAACC+AGG | - | tig0021468:46636-46655 | Msa1392030:intron | 45.0% | |
| AAGGAAACTGTACCCAACCA+GGG | - | tig0021468:46637-46656 | Msa1392030:intron | 45.0% | |
| GTAAACTCGTAAGCTACCGA+GGG | - | tig0021468:46666-46685 | Msa1392030:intron | 45.0% | |
| GTTGCTAAAACAAACGGGAG+GGG | - | tig0021468:46800-46819 | Msa1392030:intron | 45.0% | |
| TGCTGCCAACAGTCTTTCTT+CGG | + | tig0021468:46850-46869 | None:intergenic | 45.0% | |
| AGCAGGTGGAGACATTTCTT+TGG | - | tig0021468:46866-46885 | Msa1392030:intron | 45.0% | |
| TCGGTAGAGGGTTCGATAAT+AGG | - | tig0021468:46927-46946 | Msa1392030:intron | 45.0% | |
| CGGTAGAGGGTTCGATAATA+GGG | - | tig0021468:46928-46947 | Msa1392030:intron | 45.0% | |
| ! | TTTTTCCCAATTCTCCTGGC+CGG | + | tig0021468:47033-47052 | None:intergenic | 45.0% |
| AGTAGCGTAAAGCCGTAAGT+CGG | - | tig0021468:47086-47105 | Msa1392030:intron | 45.0% | |
| TAGCAAGTGAGCGGTTCTTT+CGG | - | tig0021468:47330-47349 | Msa1392030:CDS | 45.0% | |
| ! | ATCTTTTGCTTATCGGGTGG+TGG | + | tig0021468:47416-47435 | None:intergenic | 45.0% |
| ! | CGAATCTTTTGCTTATCGGG+TGG | + | tig0021468:47419-47438 | None:intergenic | 45.0% |
| AGCAAAAGATTCGAGAGTCC+AGG | - | tig0021468:47426-47445 | Msa1392030:CDS | 45.0% | |
| CGTGATACTTCCGCATCATA+CGG | + | tig0021468:47516-47535 | None:intergenic | 45.0% | |
| !! | TGATGCGGAAGTATCACGTA+CGG | - | tig0021468:47518-47537 | Msa1392030:intron | 45.0% |
| AGGTACCATAGGCACTTTGA+CGG | + | tig0021468:47841-47860 | None:intergenic | 45.0% | |
| AGGAATTCCTGCCAAGATGA+CGG | + | tig0021468:47913-47932 | None:intergenic | 45.0% | |
| !! | AGTGTTGCTTCGGGAAACAT+GGG | + | tig0021468:47975-47994 | None:intergenic | 45.0% |
| !! | AAGTGTTGCTTCGGGAAACA+TGG | + | tig0021468:47976-47995 | None:intergenic | 45.0% |
| !! | GTGGAACAAAGTGTTGCTTC+GGG | + | tig0021468:47984-48003 | None:intergenic | 45.0% |
| GATCTGTCTTGAAGTGGTCA+AGG | + | tig0021468:48051-48070 | None:intergenic | 45.0% | |
| ! | CAGATTCATATGGGCTACTG+AGG | + | tig0021468:48099-48118 | None:intergenic | 45.0% |
| CTCAGTAGCCCATATGAATC+TGG | - | tig0021468:48097-48116 | Msa1392030:CDS | 45.0% | |
| GCTGAGCATCTTCTATTCGC+TGG | - | tig0021468:46227-46246 | Msa1392030:CDS | 50.0% | |
| CTTGTGCAGTAAACCCCCTA+CGG | - | tig0021468:46275-46294 | Msa1392030:CDS | 50.0% | |
| TTGTGCAGTAAACCCCCTAC+GGG | - | tig0021468:46276-46295 | Msa1392030:CDS | 50.0% | |
| !! | TTCGTCTTAGTTGGGTTGGG+CGG | + | tig0021468:46386-46405 | None:intergenic | 50.0% |
| CGGTTCGTCTTAGTTGGGTT+GGG | + | tig0021468:46389-46408 | None:intergenic | 50.0% | |
| ! | TCGGTTCGTCTTAGTTGGGT+TGG | + | tig0021468:46390-46409 | None:intergenic | 50.0% |
| ! | CAGGTTCGGTTCGTCTTAGT+TGG | + | tig0021468:46395-46414 | None:intergenic | 50.0% |
| ! | CGGGTCTTGTATGGATATGC+AGG | - | tig0021468:46488-46507 | Msa1392030:intron | 50.0% |
| TCCTCGTCAAGTCAGTTTGG+GGG | - | tig0021468:46563-46582 | Msa1392030:CDS | 50.0% | |
| TGGACACACTTGCGCGAATT+CGG | - | tig0021468:46589-46608 | Msa1392030:CDS | 50.0% | |
| ACTTGCGCGAATTCGGGTAA+CGG | - | tig0021468:46596-46615 | Msa1392030:CDS | 50.0% | |
| ! | GAATTCGGGTAACGGCTACA+AGG | - | tig0021468:46604-46623 | Msa1392030:CDS | 50.0% |
| AAACTGTACCCAACCAGGGA+TGG | - | tig0021468:46641-46660 | Msa1392030:intron | 50.0% | |
| GTTTACGTCCATCCCTGGTT+GGG | + | tig0021468:46652-46671 | None:intergenic | 50.0% | |
| AGTTTACGTCCATCCCTGGT+TGG | + | tig0021468:46653-46672 | None:intergenic | 50.0% | |
| TACGAGTTTACGTCCATCCC+TGG | + | tig0021468:46657-46676 | None:intergenic | 50.0% | |
| CGTAAACTCGTAAGCTACCG+AGG | - | tig0021468:46665-46684 | Msa1392030:intron | 50.0% | |
| TGGACGATTATCCCTACCCT+CGG | + | tig0021468:46685-46704 | None:intergenic | 50.0% | |
| GAAGAAAGACTGTTGGCAGC+AGG | - | tig0021468:46849-46868 | Msa1392030:intron | 50.0% | |
| AAGTTCCGGCCAGGAGAATT+GGG | - | tig0021468:47025-47044 | Msa1392030:intron | 50.0% | |
| GTAGCGTAAAGCCGTAAGTC+GGG | - | tig0021468:47087-47106 | Msa1392030:intron | 50.0% | |
| TAGCGTAAAGCCGTAAGTCG+GGG | - | tig0021468:47088-47107 | Msa1392030:intron | 50.0% | |
| GAGCACATGTAACGCACAGT+CGG | + | tig0021468:47190-47209 | None:intergenic | 50.0% | |
| GTGCGTTACATGTGCTCTAC+AGG | - | tig0021468:47193-47212 | Msa1392030:intron | 50.0% | |
| AGGGGAAGAAAGATGGAGTG+CGG | + | tig0021468:47219-47238 | None:intergenic | 50.0% | |
| AGCAAGTGAGCGGTTCTTTC+GGG | - | tig0021468:47331-47350 | Msa1392030:CDS | 50.0% | |
| AACAATGCAGCTTGCGTTGC+GGG | + | tig0021468:47391-47410 | None:intergenic | 50.0% | |
| GAACAATGCAGCTTGCGTTG+CGG | + | tig0021468:47392-47411 | None:intergenic | 50.0% | |
| AAAGCGGAATTTACCGGTGG+TGG | + | tig0021468:47586-47605 | None:intergenic | 50.0% | |
| ACCACCGGTAAATTCCGCTT+TGG | - | tig0021468:47585-47604 | Msa1392030:intron | 50.0% | |
| CCACCGGTAAATTCCGCTTT+GGG | - | tig0021468:47586-47605 | Msa1392030:intron | 50.0% | |
| CACCGGTAAATTCCGCTTTG+GGG | - | tig0021468:47587-47606 | Msa1392030:intron | 50.0% | |
| AGCGGCGCCAAATCTTTCTA+TGG | - | tig0021468:47793-47812 | Msa1392030:CDS | 50.0% | |
| ! | TTTCGCCGTCAAAGTGCCTA+TGG | - | tig0021468:47833-47852 | Msa1392030:CDS | 50.0% |
| GTTACCCGAAGCTCATGTAG+AGG | - | tig0021468:47872-47891 | Msa1392030:intron | 50.0% | |
| AGGTGCCTCTACATGAGCTT+CGG | + | tig0021468:47880-47899 | None:intergenic | 50.0% | |
| !! | AGCTCATGTAGAGGCACCTA+CGG | - | tig0021468:47881-47900 | Msa1392030:intron | 50.0% |
| CCTTCAAAATTGGGAGCCCA+CGG | - | tig0021468:47930-47949 | Msa1392030:intron | 50.0% | |
| CTTCAAAATTGGGAGCCCAC+GGG | - | tig0021468:47931-47950 | Msa1392030:intron | 50.0% | |
| GCTGAGCATCTTCTATTCGC+TGG | - | tig0021468:46227-46246 | Msa1392030:CDS | 50.0% | |
| CTTGTGCAGTAAACCCCCTA+CGG | - | tig0021468:46275-46294 | Msa1392030:CDS | 50.0% | |
| TTGTGCAGTAAACCCCCTAC+GGG | - | tig0021468:46276-46295 | Msa1392030:CDS | 50.0% | |
| !! | TTCGTCTTAGTTGGGTTGGG+CGG | + | tig0021468:46386-46405 | None:intergenic | 50.0% |
| CGGTTCGTCTTAGTTGGGTT+GGG | + | tig0021468:46389-46408 | None:intergenic | 50.0% | |
| ! | TCGGTTCGTCTTAGTTGGGT+TGG | + | tig0021468:46390-46409 | None:intergenic | 50.0% |
| ! | CAGGTTCGGTTCGTCTTAGT+TGG | + | tig0021468:46395-46414 | None:intergenic | 50.0% |
| ! | CGGGTCTTGTATGGATATGC+AGG | - | tig0021468:46488-46507 | Msa1392030:intron | 50.0% |
| TCCTCGTCAAGTCAGTTTGG+GGG | - | tig0021468:46563-46582 | Msa1392030:CDS | 50.0% | |
| TGGACACACTTGCGCGAATT+CGG | - | tig0021468:46589-46608 | Msa1392030:CDS | 50.0% | |
| ACTTGCGCGAATTCGGGTAA+CGG | - | tig0021468:46596-46615 | Msa1392030:CDS | 50.0% | |
| ! | GAATTCGGGTAACGGCTACA+AGG | - | tig0021468:46604-46623 | Msa1392030:CDS | 50.0% |
| AAACTGTACCCAACCAGGGA+TGG | - | tig0021468:46641-46660 | Msa1392030:intron | 50.0% | |
| GTTTACGTCCATCCCTGGTT+GGG | + | tig0021468:46652-46671 | None:intergenic | 50.0% | |
| AGTTTACGTCCATCCCTGGT+TGG | + | tig0021468:46653-46672 | None:intergenic | 50.0% | |
| TACGAGTTTACGTCCATCCC+TGG | + | tig0021468:46657-46676 | None:intergenic | 50.0% | |
| CGTAAACTCGTAAGCTACCG+AGG | - | tig0021468:46665-46684 | Msa1392030:intron | 50.0% | |
| TGGACGATTATCCCTACCCT+CGG | + | tig0021468:46685-46704 | None:intergenic | 50.0% | |
| GAAGAAAGACTGTTGGCAGC+AGG | - | tig0021468:46849-46868 | Msa1392030:intron | 50.0% | |
| AAGTTCCGGCCAGGAGAATT+GGG | - | tig0021468:47025-47044 | Msa1392030:intron | 50.0% | |
| GTAGCGTAAAGCCGTAAGTC+GGG | - | tig0021468:47087-47106 | Msa1392030:intron | 50.0% | |
| TAGCGTAAAGCCGTAAGTCG+GGG | - | tig0021468:47088-47107 | Msa1392030:intron | 50.0% | |
| GAGCACATGTAACGCACAGT+CGG | + | tig0021468:47190-47209 | None:intergenic | 50.0% | |
| GTGCGTTACATGTGCTCTAC+AGG | - | tig0021468:47193-47212 | Msa1392030:intron | 50.0% | |
| AGGGGAAGAAAGATGGAGTG+CGG | + | tig0021468:47219-47238 | None:intergenic | 50.0% | |
| AGCAAGTGAGCGGTTCTTTC+GGG | - | tig0021468:47331-47350 | Msa1392030:CDS | 50.0% | |
| AACAATGCAGCTTGCGTTGC+GGG | + | tig0021468:47391-47410 | None:intergenic | 50.0% | |
| GAACAATGCAGCTTGCGTTG+CGG | + | tig0021468:47392-47411 | None:intergenic | 50.0% | |
| AAAGCGGAATTTACCGGTGG+TGG | + | tig0021468:47586-47605 | None:intergenic | 50.0% | |
| ACCACCGGTAAATTCCGCTT+TGG | - | tig0021468:47585-47604 | Msa1392030:intron | 50.0% | |
| CCACCGGTAAATTCCGCTTT+GGG | - | tig0021468:47586-47605 | Msa1392030:intron | 50.0% | |
| CACCGGTAAATTCCGCTTTG+GGG | - | tig0021468:47587-47606 | Msa1392030:intron | 50.0% | |
| AGCGGCGCCAAATCTTTCTA+TGG | - | tig0021468:47793-47812 | Msa1392030:CDS | 50.0% | |
| ! | TTTCGCCGTCAAAGTGCCTA+TGG | - | tig0021468:47833-47852 | Msa1392030:CDS | 50.0% |
| GTTACCCGAAGCTCATGTAG+AGG | - | tig0021468:47872-47891 | Msa1392030:intron | 50.0% | |
| AGGTGCCTCTACATGAGCTT+CGG | + | tig0021468:47880-47899 | None:intergenic | 50.0% | |
| !! | AGCTCATGTAGAGGCACCTA+CGG | - | tig0021468:47881-47900 | Msa1392030:intron | 50.0% |
| CCTTCAAAATTGGGAGCCCA+CGG | - | tig0021468:47930-47949 | Msa1392030:intron | 50.0% | |
| CTTCAAAATTGGGAGCCCAC+GGG | - | tig0021468:47931-47950 | Msa1392030:intron | 50.0% | |
| CCTAGCACGGGACACAGAAT+AGG | + | tig0021468:45804-45823 | None:intergenic | 55.0% | |
| CCTATTCTGTGTCCCGTGCT+AGG | - | tig0021468:45801-45820 | Msa1392030:CDS | 55.0% | |
| AGGATCCAGCATGCGGAACA+CGG | + | tig0021468:46156-46175 | None:intergenic | 55.0% | |
| GCTCAGCTCCGCACAACATA+GGG | + | tig0021468:46214-46233 | None:intergenic | 55.0% | |
| TGCTCAGCTCCGCACAACAT+AGG | + | tig0021468:46215-46234 | None:intergenic | 55.0% | |
| CGTAGGGGGTTTACTGCACA+AGG | + | tig0021468:46277-46296 | None:intergenic | 55.0% | |
| TCGCGGGGACTACTTTACGA+CGG | + | tig0021468:46309-46328 | None:intergenic | 55.0% | |
| AGTAGTCCCCGCGAAGCTTT+CGG | - | tig0021468:46315-46334 | Msa1392030:CDS | 55.0% | |
| !! | TCGTCTTAGTTGGGTTGGGC+GGG | + | tig0021468:46385-46404 | None:intergenic | 55.0% |
| ! | ACTCGGAGTACCCTCCCAAA+AGG | + | tig0021468:46434-46453 | None:intergenic | 55.0% |
| ! | CCTACGAGGTACCCACTACT+CGG | + | tig0021468:46451-46470 | None:intergenic | 55.0% |
| CATACAAGACCCGAGTAGGC+GGG | + | tig0021468:46481-46500 | None:intergenic | 55.0% | |
| CCATACAAGACCCGAGTAGG+CGG | + | tig0021468:46482-46501 | None:intergenic | 55.0% | |
| GGTGCTCCTAGGTGTGTGTA+GGG | - | tig0021468:46515-46534 | Msa1392030:intron | 55.0% | |
| GTGCTCCTAGGTGTGTGTAG+GGG | - | tig0021468:46516-46535 | Msa1392030:intron | 55.0% | |
| CACAACCCCTACACACACCT+AGG | + | tig0021468:46524-46543 | None:intergenic | 55.0% | |
| CCTCGTCAAGTCAGTTTGGG+GGG | - | tig0021468:46564-46583 | Msa1392030:CDS | 55.0% | |
| TCAAGTCAGTTTGGGGGGTG+TGG | - | tig0021468:46569-46588 | Msa1392030:CDS | 55.0% | |
| GGACACACTTGCGCGAATTC+GGG | - | tig0021468:46590-46609 | Msa1392030:CDS | 55.0% | |
| ACTCGTAAGCTACCGAGGGT+AGG | - | tig0021468:46670-46689 | Msa1392030:intron | 55.0% | |
| CTCGTAAGCTACCGAGGGTA+GGG | - | tig0021468:46671-46690 | Msa1392030:intron | 55.0% | |
| GAGGGTAGGGATAATCGTCC+AGG | - | tig0021468:46684-46703 | Msa1392030:intron | 55.0% | |
| GCTCTTGGTGAGGAGACCTT+AGG | - | tig0021468:46773-46792 | Msa1392030:intron | 55.0% | |
| GCTAAAACAAACGGGAGGGG+AGG | - | tig0021468:46803-46822 | Msa1392030:intron | 55.0% | |
| GAAAGACTGTTGGCAGCAGG+TGG | - | tig0021468:46852-46871 | Msa1392030:intron | 55.0% | |
| AATGCGGGCAGGGTTAAGCT+CGG | - | tig0021468:46908-46927 | Msa1392030:intron | 55.0% | |
| GCAGGGTTAAGCTCGGTAGA+GGG | - | tig0021468:46915-46934 | Msa1392030:intron | 55.0% | |
| CAAGTTCCGGCCAGGAGAAT+TGG | - | tig0021468:47024-47043 | Msa1392030:intron | 55.0% | |
| AGCGTAAAGCCGTAAGTCGG+GGG | - | tig0021468:47089-47108 | Msa1392030:intron | 55.0% | |
| ! | TGCGTTCGGTTCGAAAGGCA+TGG | - | tig0021468:47266-47285 | Msa1392030:intron | 55.0% |
| !! | ACTTGCTAGCCGGACTAGTG+GGG | + | tig0021468:47318-47337 | None:intergenic | 55.0% |
| !! | CACTTGCTAGCCGGACTAGT+GGG | + | tig0021468:47319-47338 | None:intergenic | 55.0% |
| ! | TCACTTGCTAGCCGGACTAG+TGG | + | tig0021468:47320-47339 | None:intergenic | 55.0% |
| TAGTCCGGCTAGCAAGTGAG+CGG | - | tig0021468:47321-47340 | Msa1392030:CDS | 55.0% | |
| ! | AGAACCGCTCACTTGCTAGC+CGG | + | tig0021468:47328-47347 | None:intergenic | 55.0% |
| CTAATGACAAGGGCCGACGA+CGG | - | tig0021468:47475-47494 | Msa1392030:intron | 55.0% | |
| TCACGTACGGTTCCCTGAGA+AGG | - | tig0021468:47531-47550 | Msa1392030:intron | 55.0% | |
| CACGTACGGTTCCCTGAGAA+GGG | - | tig0021468:47532-47551 | Msa1392030:intron | 55.0% | |
| AGGTAGCCACTCCCTTCTCA+GGG | + | tig0021468:47546-47565 | None:intergenic | 55.0% | |
| TAGGTAGCCACTCCCTTCTC+AGG | + | tig0021468:47547-47566 | None:intergenic | 55.0% | |
| AGAAGGGAGTGGCTACCTAC+TGG | - | tig0021468:47548-47567 | Msa1392030:intron | 55.0% | |
| ! | TGGTTGGTCGAAGCTCCAGT+AGG | + | tig0021468:47566-47585 | None:intergenic | 55.0% |
| ! | CGGAATTTACCGGTGGTGGT+TGG | + | tig0021468:47582-47601 | None:intergenic | 55.0% |
| CCCAAAGCGGAATTTACCGG+TGG | + | tig0021468:47589-47608 | None:intergenic | 55.0% | |
| GGCCCCAAAGCGGAATTTAC+CGG | + | tig0021468:47592-47611 | None:intergenic | 55.0% | |
| GTAAATCGGCGGTCCCTGTT+TGG | + | tig0021468:47746-47765 | None:intergenic | 55.0% | |
| GCGCCGCTCACTAAATTCTG+TGG | + | tig0021468:47781-47800 | None:intergenic | 55.0% | |
| AGGCACTTTGACGGCGAAAG+CGG | + | tig0021468:47832-47851 | None:intergenic | 55.0% | |
| GGTGCCTCTACATGAGCTTC+GGG | + | tig0021468:47879-47898 | None:intergenic | 55.0% | |
| !! | AAGATGACGGATCCTGCCGT+AGG | + | tig0021468:47900-47919 | None:intergenic | 55.0% |
| TACGGCAGGATCCGTCATCT+TGG | - | tig0021468:47899-47918 | Msa1392030:intron | 55.0% | |
| ! | CCGTGGGCTCCCAATTTTGA+AGG | + | tig0021468:47933-47952 | None:intergenic | 55.0% |
| TGGTATGTTTAGTCGGGCGG+CGG | - | tig0021468:48127-48146 | Msa1392030:CDS | 55.0% | |
| CCTAGCACGGGACACAGAAT+AGG | + | tig0021468:45804-45823 | None:intergenic | 55.0% | |
| CCTATTCTGTGTCCCGTGCT+AGG | - | tig0021468:45801-45820 | Msa1392030:CDS | 55.0% | |
| AGGATCCAGCATGCGGAACA+CGG | + | tig0021468:46156-46175 | None:intergenic | 55.0% | |
| GCTCAGCTCCGCACAACATA+GGG | + | tig0021468:46214-46233 | None:intergenic | 55.0% | |
| TGCTCAGCTCCGCACAACAT+AGG | + | tig0021468:46215-46234 | None:intergenic | 55.0% | |
| CGTAGGGGGTTTACTGCACA+AGG | + | tig0021468:46277-46296 | None:intergenic | 55.0% | |
| TCGCGGGGACTACTTTACGA+CGG | + | tig0021468:46309-46328 | None:intergenic | 55.0% | |
| AGTAGTCCCCGCGAAGCTTT+CGG | - | tig0021468:46315-46334 | Msa1392030:CDS | 55.0% | |
| !! | TCGTCTTAGTTGGGTTGGGC+GGG | + | tig0021468:46385-46404 | None:intergenic | 55.0% |
| ! | ACTCGGAGTACCCTCCCAAA+AGG | + | tig0021468:46434-46453 | None:intergenic | 55.0% |
| ! | CCTACGAGGTACCCACTACT+CGG | + | tig0021468:46451-46470 | None:intergenic | 55.0% |
| CATACAAGACCCGAGTAGGC+GGG | + | tig0021468:46481-46500 | None:intergenic | 55.0% | |
| CCATACAAGACCCGAGTAGG+CGG | + | tig0021468:46482-46501 | None:intergenic | 55.0% | |
| GGTGCTCCTAGGTGTGTGTA+GGG | - | tig0021468:46515-46534 | Msa1392030:intron | 55.0% | |
| GTGCTCCTAGGTGTGTGTAG+GGG | - | tig0021468:46516-46535 | Msa1392030:intron | 55.0% | |
| CACAACCCCTACACACACCT+AGG | + | tig0021468:46524-46543 | None:intergenic | 55.0% | |
| CCTCGTCAAGTCAGTTTGGG+GGG | - | tig0021468:46564-46583 | Msa1392030:CDS | 55.0% | |
| TCAAGTCAGTTTGGGGGGTG+TGG | - | tig0021468:46569-46588 | Msa1392030:CDS | 55.0% | |
| GGACACACTTGCGCGAATTC+GGG | - | tig0021468:46590-46609 | Msa1392030:CDS | 55.0% | |
| ACTCGTAAGCTACCGAGGGT+AGG | - | tig0021468:46670-46689 | Msa1392030:intron | 55.0% | |
| CTCGTAAGCTACCGAGGGTA+GGG | - | tig0021468:46671-46690 | Msa1392030:intron | 55.0% | |
| GAGGGTAGGGATAATCGTCC+AGG | - | tig0021468:46684-46703 | Msa1392030:intron | 55.0% | |
| GCTCTTGGTGAGGAGACCTT+AGG | - | tig0021468:46773-46792 | Msa1392030:intron | 55.0% | |
| GCTAAAACAAACGGGAGGGG+AGG | - | tig0021468:46803-46822 | Msa1392030:intron | 55.0% | |
| GAAAGACTGTTGGCAGCAGG+TGG | - | tig0021468:46852-46871 | Msa1392030:intron | 55.0% | |
| AATGCGGGCAGGGTTAAGCT+CGG | - | tig0021468:46908-46927 | Msa1392030:intron | 55.0% | |
| GCAGGGTTAAGCTCGGTAGA+GGG | - | tig0021468:46915-46934 | Msa1392030:intron | 55.0% | |
| CAAGTTCCGGCCAGGAGAAT+TGG | - | tig0021468:47024-47043 | Msa1392030:intron | 55.0% | |
| AGCGTAAAGCCGTAAGTCGG+GGG | - | tig0021468:47089-47108 | Msa1392030:intron | 55.0% | |
| ! | TGCGTTCGGTTCGAAAGGCA+TGG | - | tig0021468:47266-47285 | Msa1392030:intron | 55.0% |
| !! | ACTTGCTAGCCGGACTAGTG+GGG | + | tig0021468:47318-47337 | None:intergenic | 55.0% |
| !! | CACTTGCTAGCCGGACTAGT+GGG | + | tig0021468:47319-47338 | None:intergenic | 55.0% |
| ! | TCACTTGCTAGCCGGACTAG+TGG | + | tig0021468:47320-47339 | None:intergenic | 55.0% |
| TAGTCCGGCTAGCAAGTGAG+CGG | - | tig0021468:47321-47340 | Msa1392030:CDS | 55.0% | |
| ! | AGAACCGCTCACTTGCTAGC+CGG | + | tig0021468:47328-47347 | None:intergenic | 55.0% |
| CTAATGACAAGGGCCGACGA+CGG | - | tig0021468:47475-47494 | Msa1392030:intron | 55.0% | |
| TCACGTACGGTTCCCTGAGA+AGG | - | tig0021468:47531-47550 | Msa1392030:intron | 55.0% | |
| CACGTACGGTTCCCTGAGAA+GGG | - | tig0021468:47532-47551 | Msa1392030:intron | 55.0% | |
| AGGTAGCCACTCCCTTCTCA+GGG | + | tig0021468:47546-47565 | None:intergenic | 55.0% | |
| TAGGTAGCCACTCCCTTCTC+AGG | + | tig0021468:47547-47566 | None:intergenic | 55.0% | |
| AGAAGGGAGTGGCTACCTAC+TGG | - | tig0021468:47548-47567 | Msa1392030:intron | 55.0% | |
| ! | TGGTTGGTCGAAGCTCCAGT+AGG | + | tig0021468:47566-47585 | None:intergenic | 55.0% |
| ! | CGGAATTTACCGGTGGTGGT+TGG | + | tig0021468:47582-47601 | None:intergenic | 55.0% |
| CCCAAAGCGGAATTTACCGG+TGG | + | tig0021468:47589-47608 | None:intergenic | 55.0% | |
| GGCCCCAAAGCGGAATTTAC+CGG | + | tig0021468:47592-47611 | None:intergenic | 55.0% | |
| GTAAATCGGCGGTCCCTGTT+TGG | + | tig0021468:47746-47765 | None:intergenic | 55.0% | |
| GCGCCGCTCACTAAATTCTG+TGG | + | tig0021468:47781-47800 | None:intergenic | 55.0% | |
| AGGCACTTTGACGGCGAAAG+CGG | + | tig0021468:47832-47851 | None:intergenic | 55.0% | |
| GGTGCCTCTACATGAGCTTC+GGG | + | tig0021468:47879-47898 | None:intergenic | 55.0% | |
| !! | AAGATGACGGATCCTGCCGT+AGG | + | tig0021468:47900-47919 | None:intergenic | 55.0% |
| TACGGCAGGATCCGTCATCT+TGG | - | tig0021468:47899-47918 | Msa1392030:intron | 55.0% | |
| ! | CCGTGGGCTCCCAATTTTGA+AGG | + | tig0021468:47933-47952 | None:intergenic | 55.0% |
| TGGTATGTTTAGTCGGGCGG+CGG | - | tig0021468:48127-48146 | Msa1392030:CDS | 55.0% | |
| TGCAGTAAACCCCCTACGGG+CGG | - | tig0021468:46279-46298 | Msa1392030:CDS | 60.0% | |
| GTAGTCCCCGCGAAGCTTTC+GGG | - | tig0021468:46316-46335 | Msa1392030:CDS | 60.0% | |
| CTCTTCCCGAAAGCTTCGCG+GGG | + | tig0021468:46324-46343 | None:intergenic | 60.0% | |
| CCTCTTCCCGAAAGCTTCGC+GGG | + | tig0021468:46325-46344 | None:intergenic | 60.0% | |
| CCCTCTTCCCGAAAGCTTCG+CGG | + | tig0021468:46326-46345 | None:intergenic | 60.0% | |
| CCGCGAAGCTTTCGGGAAGA+GGG | - | tig0021468:46323-46342 | Msa1392030:CDS | 60.0% | |
| CGCGAAGCTTTCGGGAAGAG+GGG | - | tig0021468:46324-46343 | Msa1392030:CDS | 60.0% | |
| !! | TGGGAGGGTACTCCGAGTAG+TGG | - | tig0021468:46436-46455 | Msa1392030:intron | 60.0% |
| !! | GGGAGGGTACTCCGAGTAGT+GGG | - | tig0021468:46437-46456 | Msa1392030:intron | 60.0% |
| !! | CCGAGTAGTGGGTACCTCGT+AGG | - | tig0021468:46448-46467 | Msa1392030:intron | 60.0% |
| ! | CCGCCTACTCGGGTCTTGTA+TGG | - | tig0021468:46479-46498 | Msa1392030:intron | 60.0% |
| !! | ATGCAGGAAGGGGTGCTCCT+AGG | - | tig0021468:46504-46523 | Msa1392030:intron | 60.0% |
| GGGTGCTCCTAGGTGTGTGT+AGG | - | tig0021468:46514-46533 | Msa1392030:intron | 60.0% | |
| !! | CCCCCCAAACTGACTTGACG+AGG | + | tig0021468:46567-46586 | None:intergenic | 60.0% |
| ! | GTTGGTTCCTCTGTCGTCGC+CGG | - | tig0021468:46747-46766 | Msa1392030:intron | 60.0% |
| TTGGTTCCTCTGTCGTCGCC+GGG | - | tig0021468:46748-46767 | Msa1392030:intron | 60.0% | |
| TCTCCTCACCAAGAGCTCCC+CGG | + | tig0021468:46769-46788 | None:intergenic | 60.0% | |
| GGCAGGGTTAAGCTCGGTAG+AGG | - | tig0021468:46914-46933 | Msa1392030:intron | 60.0% | |
| GCTGCATACAAGTTCCGGCC+AGG | - | tig0021468:47016-47035 | Msa1392030:intron | 60.0% | |
| GTAAAGCCGTAAGTCGGGGG+CGG | - | tig0021468:47092-47111 | Msa1392030:intron | 60.0% | |
| TTATGGCCGCCCCCGACTTA+CGG | + | tig0021468:47101-47120 | None:intergenic | 60.0% | |
| CGGGGGCGGCCATAAAAGAA+AGG | - | tig0021468:47106-47125 | Msa1392030:intron | 60.0% | |
| ACAGTCGGTTGCTCACGCAG+TGG | + | tig0021468:47175-47194 | None:intergenic | 60.0% | |
| ! | TGGAAGACGGGCGTTGCGTT+CGG | - | tig0021468:47252-47271 | Msa1392030:intron | 60.0% |
| ! | GGCGTTGCGTTCGGTTCGAA+AGG | - | tig0021468:47261-47280 | Msa1392030:intron | 60.0% |
| !! | TTGCTAGCCGGACTAGTGGG+GGG | + | tig0021468:47316-47335 | None:intergenic | 60.0% |
| !! | CTTGCTAGCCGGACTAGTGG+GGG | + | tig0021468:47317-47336 | None:intergenic | 60.0% |
| CGGTTCTTTCGGGCGAGAAG+CGG | - | tig0021468:47341-47360 | Msa1392030:CDS | 60.0% | |
| GGTTCTTTCGGGCGAGAAGC+GGG | - | tig0021468:47342-47361 | Msa1392030:CDS | 60.0% | |
| ACGGTTCCCTGAGAAGGGAG+TGG | - | tig0021468:47537-47556 | Msa1392030:intron | 60.0% | |
| GAGCTTCGACCAACCACCAC+CGG | - | tig0021468:47570-47589 | Msa1392030:intron | 60.0% | |
| AGTAAGGGGTGGCCCCAAAG+CGG | + | tig0021468:47602-47621 | None:intergenic | 60.0% | |
| !! | CATGTAGAGGCACCTACGGC+AGG | - | tig0021468:47885-47904 | Msa1392030:intron | 60.0% |
| GCAGGATCCGTCATCTTGGC+AGG | - | tig0021468:47903-47922 | Msa1392030:intron | 60.0% | |
| TGCAGTAAACCCCCTACGGG+CGG | - | tig0021468:46279-46298 | Msa1392030:CDS | 60.0% | |
| GTAGTCCCCGCGAAGCTTTC+GGG | - | tig0021468:46316-46335 | Msa1392030:CDS | 60.0% | |
| CTCTTCCCGAAAGCTTCGCG+GGG | + | tig0021468:46324-46343 | None:intergenic | 60.0% | |
| CCTCTTCCCGAAAGCTTCGC+GGG | + | tig0021468:46325-46344 | None:intergenic | 60.0% | |
| CCCTCTTCCCGAAAGCTTCG+CGG | + | tig0021468:46326-46345 | None:intergenic | 60.0% | |
| CCGCGAAGCTTTCGGGAAGA+GGG | - | tig0021468:46323-46342 | Msa1392030:CDS | 60.0% | |
| CGCGAAGCTTTCGGGAAGAG+GGG | - | tig0021468:46324-46343 | Msa1392030:CDS | 60.0% | |
| !! | TGGGAGGGTACTCCGAGTAG+TGG | - | tig0021468:46436-46455 | Msa1392030:intron | 60.0% |
| !! | GGGAGGGTACTCCGAGTAGT+GGG | - | tig0021468:46437-46456 | Msa1392030:intron | 60.0% |
| !! | CCGAGTAGTGGGTACCTCGT+AGG | - | tig0021468:46448-46467 | Msa1392030:intron | 60.0% |
| ! | CCGCCTACTCGGGTCTTGTA+TGG | - | tig0021468:46479-46498 | Msa1392030:intron | 60.0% |
| !! | ATGCAGGAAGGGGTGCTCCT+AGG | - | tig0021468:46504-46523 | Msa1392030:intron | 60.0% |
| GGGTGCTCCTAGGTGTGTGT+AGG | - | tig0021468:46514-46533 | Msa1392030:intron | 60.0% | |
| !! | CCCCCCAAACTGACTTGACG+AGG | + | tig0021468:46567-46586 | None:intergenic | 60.0% |
| ! | GTTGGTTCCTCTGTCGTCGC+CGG | - | tig0021468:46747-46766 | Msa1392030:intron | 60.0% |
| TTGGTTCCTCTGTCGTCGCC+GGG | - | tig0021468:46748-46767 | Msa1392030:intron | 60.0% | |
| TCTCCTCACCAAGAGCTCCC+CGG | + | tig0021468:46769-46788 | None:intergenic | 60.0% | |
| GGCAGGGTTAAGCTCGGTAG+AGG | - | tig0021468:46914-46933 | Msa1392030:intron | 60.0% | |
| GCTGCATACAAGTTCCGGCC+AGG | - | tig0021468:47016-47035 | Msa1392030:intron | 60.0% | |
| GTAAAGCCGTAAGTCGGGGG+CGG | - | tig0021468:47092-47111 | Msa1392030:intron | 60.0% | |
| TTATGGCCGCCCCCGACTTA+CGG | + | tig0021468:47101-47120 | None:intergenic | 60.0% | |
| CGGGGGCGGCCATAAAAGAA+AGG | - | tig0021468:47106-47125 | Msa1392030:intron | 60.0% | |
| ACAGTCGGTTGCTCACGCAG+TGG | + | tig0021468:47175-47194 | None:intergenic | 60.0% | |
| ! | TGGAAGACGGGCGTTGCGTT+CGG | - | tig0021468:47252-47271 | Msa1392030:intron | 60.0% |
| ! | GGCGTTGCGTTCGGTTCGAA+AGG | - | tig0021468:47261-47280 | Msa1392030:intron | 60.0% |
| !! | TTGCTAGCCGGACTAGTGGG+GGG | + | tig0021468:47316-47335 | None:intergenic | 60.0% |
| !! | CTTGCTAGCCGGACTAGTGG+GGG | + | tig0021468:47317-47336 | None:intergenic | 60.0% |
| CGGTTCTTTCGGGCGAGAAG+CGG | - | tig0021468:47341-47360 | Msa1392030:CDS | 60.0% | |
| GGTTCTTTCGGGCGAGAAGC+GGG | - | tig0021468:47342-47361 | Msa1392030:CDS | 60.0% | |
| ACGGTTCCCTGAGAAGGGAG+TGG | - | tig0021468:47537-47556 | Msa1392030:intron | 60.0% | |
| GAGCTTCGACCAACCACCAC+CGG | - | tig0021468:47570-47589 | Msa1392030:intron | 60.0% | |
| AGTAAGGGGTGGCCCCAAAG+CGG | + | tig0021468:47602-47621 | None:intergenic | 60.0% | |
| !! | CATGTAGAGGCACCTACGGC+AGG | - | tig0021468:47885-47904 | Msa1392030:intron | 60.0% |
| GCAGGATCCGTCATCTTGGC+AGG | - | tig0021468:47903-47922 | Msa1392030:intron | 60.0% | |
| GATCGCCGTGTTCCGCATGC+TGG | - | tig0021468:46148-46167 | Msa1392030:CDS | 65.0% | |
| ACTGCACAAGGCCCCTGCAG+AGG | + | tig0021468:46265-46284 | None:intergenic | 65.0% | |
| CCCGCGAAGCTTTCGGGAAG+AGG | - | tig0021468:46322-46341 | Msa1392030:CDS | 65.0% | |
| AGGACCTCGACCCGCCTACT+CGG | - | tig0021468:46468-46487 | Msa1392030:intron | 65.0% | |
| AACCAACCCGCCTGCTGTGG+CGG | + | tig0021468:46734-46753 | None:intergenic | 65.0% | |
| AGGAACCAACCCGCCTGCTG+TGG | + | tig0021468:46737-46756 | None:intergenic | 65.0% | |
| TGGTTCCTCTGTCGTCGCCG+GGG | - | tig0021468:46749-46768 | Msa1392030:intron | 65.0% | |
| GACTAGTGGGGGGCCCTATC+CGG | + | tig0021468:47306-47325 | None:intergenic | 65.0% | |
| GATAGGGCCCCCCACTAGTC+CGG | - | tig0021468:47306-47325 | Msa1392030:CDS | 65.0% | |
| AAGGGCCGACGACGGAAGCT+CGG | - | tig0021468:47483-47502 | Msa1392030:intron | 65.0% | |
| CGGGACGGAGCCGTATGATG+CGG | - | tig0021468:47503-47522 | Msa1392030:intron | 65.0% | |
| GATCGCCGTGTTCCGCATGC+TGG | - | tig0021468:46148-46167 | Msa1392030:CDS | 65.0% | |
| ACTGCACAAGGCCCCTGCAG+AGG | + | tig0021468:46265-46284 | None:intergenic | 65.0% | |
| CCCGCGAAGCTTTCGGGAAG+AGG | - | tig0021468:46322-46341 | Msa1392030:CDS | 65.0% | |
| AGGACCTCGACCCGCCTACT+CGG | - | tig0021468:46468-46487 | Msa1392030:intron | 65.0% | |
| AACCAACCCGCCTGCTGTGG+CGG | + | tig0021468:46734-46753 | None:intergenic | 65.0% | |
| AGGAACCAACCCGCCTGCTG+TGG | + | tig0021468:46737-46756 | None:intergenic | 65.0% | |
| TGGTTCCTCTGTCGTCGCCG+GGG | - | tig0021468:46749-46768 | Msa1392030:intron | 65.0% | |
| GACTAGTGGGGGGCCCTATC+CGG | + | tig0021468:47306-47325 | None:intergenic | 65.0% | |
| GATAGGGCCCCCCACTAGTC+CGG | - | tig0021468:47306-47325 | Msa1392030:CDS | 65.0% | |
| AAGGGCCGACGACGGAAGCT+CGG | - | tig0021468:47483-47502 | Msa1392030:intron | 65.0% | |
| CGGGACGGAGCCGTATGATG+CGG | - | tig0021468:47503-47522 | Msa1392030:intron | 65.0% | |
| ACGACGGACGACCGCCCGTA+GGG | + | tig0021468:46293-46312 | None:intergenic | 70.0% | |
| TACGACGGACGACCGCCCGT+AGG | + | tig0021468:46294-46313 | None:intergenic | 70.0% | |
| AGGCGGGTCGAGGTCCTACG+AGG | + | tig0021468:46465-46484 | None:intergenic | 70.0% | |
| GGACCTCGACCCGCCTACTC+GGG | - | tig0021468:46469-46488 | Msa1392030:intron | 70.0% | |
| AGACCCGAGTAGGCGGGTCG+AGG | + | tig0021468:46475-46494 | None:intergenic | 70.0% | |
| AAAAGCCGCCCCGCCACAGC+AGG | - | tig0021468:46721-46740 | Msa1392030:intron | 70.0% | |
| ACCAACCCGCCTGCTGTGGC+GGG | + | tig0021468:46733-46752 | None:intergenic | 70.0% | |
| TGTCGTCGCCGGGGAGCTCT+TGG | - | tig0021468:46758-46777 | Msa1392030:intron | 70.0% | |
| TCGCCGGGGAGCTCTTGGTG+AGG | - | tig0021468:46763-46782 | Msa1392030:intron | 70.0% | |
| CTTTCGGGCGAGAAGCGGGC+CGG | - | tig0021468:47346-47365 | Msa1392030:CDS | 70.0% | |
| TTTCGGGCGAGAAGCGGGCC+GGG | - | tig0021468:47347-47366 | Msa1392030:CDS | 70.0% | |
| AGGGCCGACGACGGAAGCTC+GGG | - | tig0021468:47484-47503 | Msa1392030:intron | 70.0% | |
| CCGTCCCGAGCTTCCGTCGT+CGG | + | tig0021468:47491-47510 | None:intergenic | 70.0% | |
| CCGACGACGGAAGCTCGGGA+CGG | - | tig0021468:47488-47507 | Msa1392030:intron | 70.0% | |
| TTAGTCGGGCGGCGGCCGTT+AGG | - | tig0021468:48135-48154 | Msa1392030:CDS | 70.0% | |
| ACGACGGACGACCGCCCGTA+GGG | + | tig0021468:46293-46312 | None:intergenic | 70.0% | |
| TACGACGGACGACCGCCCGT+AGG | + | tig0021468:46294-46313 | None:intergenic | 70.0% | |
| AGGCGGGTCGAGGTCCTACG+AGG | + | tig0021468:46465-46484 | None:intergenic | 70.0% | |
| GGACCTCGACCCGCCTACTC+GGG | - | tig0021468:46469-46488 | Msa1392030:intron | 70.0% | |
| AGACCCGAGTAGGCGGGTCG+AGG | + | tig0021468:46475-46494 | None:intergenic | 70.0% | |
| AAAAGCCGCCCCGCCACAGC+AGG | - | tig0021468:46721-46740 | Msa1392030:intron | 70.0% | |
| ACCAACCCGCCTGCTGTGGC+GGG | + | tig0021468:46733-46752 | None:intergenic | 70.0% | |
| TGTCGTCGCCGGGGAGCTCT+TGG | - | tig0021468:46758-46777 | Msa1392030:intron | 70.0% | |
| TCGCCGGGGAGCTCTTGGTG+AGG | - | tig0021468:46763-46782 | Msa1392030:intron | 70.0% | |
| CTTTCGGGCGAGAAGCGGGC+CGG | - | tig0021468:47346-47365 | Msa1392030:CDS | 70.0% | |
| TTTCGGGCGAGAAGCGGGCC+GGG | - | tig0021468:47347-47366 | Msa1392030:CDS | 70.0% | |
| AGGGCCGACGACGGAAGCTC+GGG | - | tig0021468:47484-47503 | Msa1392030:intron | 70.0% | |
| CCGTCCCGAGCTTCCGTCGT+CGG | + | tig0021468:47491-47510 | None:intergenic | 70.0% | |
| CCGACGACGGAAGCTCGGGA+CGG | - | tig0021468:47488-47507 | Msa1392030:intron | 70.0% | |
| TTAGTCGGGCGGCGGCCGTT+AGG | - | tig0021468:48135-48154 | Msa1392030:CDS | 70.0% | |
| GACGGACGACCGCCCGTAGG+GGG | + | tig0021468:46291-46310 | None:intergenic | 75.0% | |
| CGACGGACGACCGCCCGTAG+GGG | + | tig0021468:46292-46311 | None:intergenic | 75.0% | |
| CCAACCCGCCTGCTGTGGCG+GGG | + | tig0021468:46732-46751 | None:intergenic | 75.0% | |
| GAGCTCCCCGGCGACGACAG+AGG | + | tig0021468:46757-46776 | None:intergenic | 75.0% | |
| GAGAAGCGGGCCGGGCCCTA+CGG | - | tig0021468:47355-47374 | Msa1392030:CDS | 75.0% | |
| AGAAGCGGGCCGGGCCCTAC+GGG | - | tig0021468:47356-47375 | Msa1392030:CDS | 75.0% | |
| AGATGCCCGCCCGTAGGGCC+CGG | + | tig0021468:47368-47387 | None:intergenic | 75.0% | |
| GCGGGAGATGCCCGCCCGTA+GGG | + | tig0021468:47373-47392 | None:intergenic | 75.0% | |
| TGCGGGAGATGCCCGCCCGT+AGG | + | tig0021468:47374-47393 | None:intergenic | 75.0% | |
| GACGGACGACCGCCCGTAGG+GGG | + | tig0021468:46291-46310 | None:intergenic | 75.0% | |
| CGACGGACGACCGCCCGTAG+GGG | + | tig0021468:46292-46311 | None:intergenic | 75.0% | |
| CCAACCCGCCTGCTGTGGCG+GGG | + | tig0021468:46732-46751 | None:intergenic | 75.0% | |
| GAGCTCCCCGGCGACGACAG+AGG | + | tig0021468:46757-46776 | None:intergenic | 75.0% | |
| GAGAAGCGGGCCGGGCCCTA+CGG | - | tig0021468:47355-47374 | Msa1392030:CDS | 75.0% | |
| AGAAGCGGGCCGGGCCCTAC+GGG | - | tig0021468:47356-47375 | Msa1392030:CDS | 75.0% | |
| AGATGCCCGCCCGTAGGGCC+CGG | + | tig0021468:47368-47387 | None:intergenic | 75.0% | |
| GCGGGAGATGCCCGCCCGTA+GGG | + | tig0021468:47373-47392 | None:intergenic | 75.0% | |
| TGCGGGAGATGCCCGCCCGT+AGG | + | tig0021468:47374-47393 | None:intergenic | 75.0% | |
| ! | AGCCGCCCCGCCACAGCAGG+CGG | - | tig0021468:46724-46743 | Msa1392030:intron | 80.0% |
| !! | ACCCGCCTGCTGTGGCGGGG+CGG | + | tig0021468:46729-46748 | None:intergenic | 80.0% |
| ! | CCCCGCCACAGCAGGCGGGT+TGG | - | tig0021468:46729-46748 | Msa1392030:intron | 80.0% |
| ! | AGCCGCCCCGCCACAGCAGG+CGG | - | tig0021468:46724-46743 | Msa1392030:intron | 80.0% |
| !! | ACCCGCCTGCTGTGGCGGGG+CGG | + | tig0021468:46729-46748 | None:intergenic | 80.0% |
| ! | CCCCGCCACAGCAGGCGGGT+TGG | - | tig0021468:46729-46748 | Msa1392030:intron | 80.0% |
| ! | GCCGCCCCGCCACAGCAGGC+GGG | - | tig0021468:46725-46744 | Msa1392030:intron | 85.0% |
| ! | AGCGGGCCGGGCCCTACGGG+CGG | - | tig0021468:47359-47378 | Msa1392030:CDS | 85.0% |
| ! | GCCGCCCCGCCACAGCAGGC+GGG | - | tig0021468:46725-46744 | Msa1392030:intron | 85.0% |
| ! | AGCGGGCCGGGCCCTACGGG+CGG | - | tig0021468:47359-47378 | Msa1392030:CDS | 85.0% |
| ! | GCGGGCCGGGCCCTACGGGC+GGG | - | tig0021468:47360-47379 | Msa1392030:CDS | 90.0% |
| ! | GCGGGCCGGGCCCTACGGGC+GGG | - | tig0021468:47360-47379 | Msa1392030:CDS | 90.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0021468 | gene | 45768 | 48175 | 45768 | ID=Msa1392030;Name=Msa1392030 |
| tig0021468 | mRNA | 45768 | 48175 | 45768 | ID=Msa1392030-mRNA-1;Parent=Msa1392030;Name=Msa1392030-mRNA-1;_AED=0.25;_eAED=0.25;_QI=0|0|0|1|0|0.2|5|0|455 |
| tig0021468 | exon | 47932 | 48175 | 47932 | ID=Msa1392030-mRNA-1:exon:12965;Parent=Msa1392030-mRNA-1 |
| tig0021468 | exon | 47661 | 47865 | 47661 | ID=Msa1392030-mRNA-1:exon:12964;Parent=Msa1392030-mRNA-1 |
| tig0021468 | exon | 47278 | 47473 | 47278 | ID=Msa1392030-mRNA-1:exon:12963;Parent=Msa1392030-mRNA-1 |
| tig0021468 | exon | 46536 | 46632 | 46536 | ID=Msa1392030-mRNA-1:exon:12962;Parent=Msa1392030-mRNA-1 |
| tig0021468 | exon | 45768 | 46390 | 45768 | ID=Msa1392030-mRNA-1:exon:12961;Parent=Msa1392030-mRNA-1 |
| tig0021468 | CDS | 47932 | 48175 | 47932 | ID=Msa1392030-mRNA-1:cds;Parent=Msa1392030-mRNA-1 |
| tig0021468 | CDS | 47661 | 47865 | 47661 | ID=Msa1392030-mRNA-1:cds;Parent=Msa1392030-mRNA-1 |
| tig0021468 | CDS | 47278 | 47473 | 47278 | ID=Msa1392030-mRNA-1:cds;Parent=Msa1392030-mRNA-1 |
| tig0021468 | CDS | 46536 | 46632 | 46536 | ID=Msa1392030-mRNA-1:cds;Parent=Msa1392030-mRNA-1 |
| tig0021468 | CDS | 45768 | 46390 | 45768 | ID=Msa1392030-mRNA-1:cds;Parent=Msa1392030-mRNA-1 |
| Gene Sequence |
| Protein sequence |
