AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0398200


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0398200 MtrunA17_Chr3g0086341 93.275 342 20 1 1 342 1 339 0.0 664
Msa0398200 MtrunA17_Chr3g0086341 95.050 101 4 1 328 427 414 514 2.78e-61 207
Msa0398200 MtrunA17_Chr7g0248041 39.267 191 99 5 140 326 378 555 6.91e-32 127
Msa0398200 MtrunA17_Chr8g0387161 35.417 192 109 5 139 326 82 262 8.06e-26 106
Msa0398200 MtrunA17_Chr1g0186261 36.813 182 102 5 147 326 383 553 1.63e-25 108
Msa0398200 MtrunA17_Chr1g0186281 38.251 183 98 6 147 326 380 550 1.89e-25 108
Msa0398200 MtrunA17_Chr1g0186191 37.056 197 111 5 132 326 375 560 2.97e-25 108
Msa0398200 MtrunA17_Chr8g0387141 37.912 182 100 4 147 326 391 561 4.31e-25 107
Msa0398200 MtrunA17_Chr8g0387181 39.011 182 98 4 147 326 423 593 4.35e-25 107
Msa0398200 MtrunA17_Chr8g0348691 34.783 184 103 6 149 326 76 248 1.41e-24 102
Msa0398200 MtrunA17_Chr7g0241681 32.778 180 114 5 143 321 188 361 4.62e-19 88.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0398200 AT1G13880.1 33.713 439 236 14 4 417 4 412 2.25e-65 215
Msa0398200 AT1G13880.3 33.485 439 238 14 4 417 4 413 2.57e-65 215
Msa0398200 AT1G13880.2 33.713 439 236 14 4 417 14 422 2.90e-65 215
Msa0398200 AT2G03470.1 35.417 336 175 6 1 330 1 300 8.85e-62 207
Msa0398200 AT2G03470.2 36.036 333 176 8 1 330 1 299 4.03e-61 205
Msa0398200 AT1G26580.3 46.222 225 112 4 114 329 33 257 4.57e-60 202
Msa0398200 AT1G26580.2 46.222 225 112 4 114 329 99 323 2.02e-59 202
Msa0398200 AT1G26580.1 46.222 225 112 4 114 329 99 323 2.02e-59 202
Msa0398200 AT4G11400.2 39.247 186 92 6 145 325 370 539 2.08e-28 117
Msa0398200 AT4G11400.1 39.247 186 92 6 145 325 370 539 2.08e-28 117
Msa0398200 AT5G04110.2 31.868 182 115 4 146 325 359 533 9.90e-23 100
Msa0398200 AT5G04110.1 31.868 182 115 4 146 325 358 532 9.96e-23 100
Msa0398200 AT5G04110.3 31.868 182 115 4 146 325 358 532 9.96e-23 100
Msa0398200 AT2G46040.3 35.165 182 99 6 151 326 362 530 1.86e-16 82.0
Msa0398200 AT2G46040.1 35.165 182 99 6 151 326 362 530 1.86e-16 82.0
Msa0398200 AT2G46040.2 35.165 182 99 6 151 326 376 544 1.97e-16 82.0
Msa0398200 AT5G04110.4 30.405 148 100 3 146 291 358 504 1.65e-14 75.9

Find 140 sgRNAs with CRISPR-Local

Find 242 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAATCGAATCGAACAAAAT+TGG 0.219915 3_2:-18870659 None:intergenic
CACTGGGACCTGCATGTTTC+GGG 0.231710 3_2:-18871747 None:intergenic
TAGGTATTCCTGCTTCTTCT+TGG 0.231790 3_2:+18872060 Msa0398200:CDS
ACTGAAGTACTCATGGAAAA+AGG 0.244769 3_2:-18872138 None:intergenic
CATCCCTCAACAAGAATTTC+TGG 0.247523 3_2:+18872636 Msa0398200:CDS
CTCATGAGTAAATGTCCTTA+TGG 0.264769 3_2:-18872195 None:intergenic
ATTGAGAAATTCATTGAATT+GGG 0.268674 3_2:+18872527 Msa0398200:CDS
CTGAAATATATTGGCCGTTC+TGG 0.274949 3_2:-18872161 None:intergenic
AGGGATATATGAAGAGAAAA+AGG 0.284922 3_2:-18870383 None:intergenic
TTCATTGAATTGGGGTTTGC+TGG 0.296184 3_2:+18872536 Msa0398200:CDS
TATCACTATCAGCACTTAAT+AGG 0.298492 3_2:-18872763 None:intergenic
CATCCCAAACATGTTGGTCC+TGG 0.308074 3_2:-18873060 None:intergenic
AGATGTGAGTGCGGTATATA+TGG 0.310193 3_2:-18870356 None:intergenic
GATTGAGAAATTCATTGAAT+TGG 0.317579 3_2:+18872526 Msa0398200:CDS
CAGATTCAAACCTCAATGTT+TGG 0.318946 3_2:+18872315 Msa0398200:CDS
AAGCCCAGGACCAACATGTT+TGG 0.344788 3_2:+18873056 Msa0398200:intron
TCACTGGGACCTGCATGTTT+CGG 0.347195 3_2:-18871748 None:intergenic
TGAATTGGGGTTTGCTGGCA+TGG 0.361365 3_2:+18872541 Msa0398200:CDS
AGGTATTCCTGCTTCTTCTT+GGG 0.363279 3_2:+18872061 Msa0398200:CDS
AGCCCAGGACCAACATGTTT+GGG 0.368080 3_2:+18873057 Msa0398200:intron
AGGAGAATGTTCAAGGAGTA+TGG 0.375340 3_2:-18872228 None:intergenic
CGTTCTGGACTGAAATATAT+TGG 0.377694 3_2:-18872170 None:intergenic
GCTGGGGACTCTCCTGTGAT+AGG 0.378845 3_2:+18872041 Msa0398200:CDS
AGATTCAAACCTCAATGTTT+GGG 0.386204 3_2:+18872316 Msa0398200:CDS
GAGTGGGAATGGTGATCATT+GGG 0.407252 3_2:+18873150 Msa0398200:CDS
AAATTCTTGTTGAGGGATGC+TGG 0.410628 3_2:-18872632 None:intergenic
GAAAGCGAGCTGAGCAGAAC+AGG 0.412737 3_2:+18872735 Msa0398200:CDS
AATGTCCTTATGGGTCGTTC+TGG 0.414471 3_2:-18872185 None:intergenic
CACCTGAAGTATTAGCCAAA+TGG 0.414574 3_2:-18871819 None:intergenic
ATGTGTAAGACAACATATAA+TGG 0.417704 3_2:+18872472 Msa0398200:CDS
ATCTTCTCGATCCGAGCTAA+AGG 0.426168 3_2:+18870712 Msa0398200:five_prime_UTR
CATTGGGGCAGTAACTATAC+TGG 0.429444 3_2:+18873166 Msa0398200:CDS
ATCCCAAACATGTTGGTCCT+GGG 0.430334 3_2:-18873059 None:intergenic
GATGCACCAGGGTGGGATCC+TGG 0.430640 3_2:+18873232 Msa0398200:CDS
GAATCGAATCGAACAAAATT+GGG 0.431674 3_2:-18870658 None:intergenic
TCATGAGTAAATGTCCTTAT+GGG 0.441634 3_2:-18872194 None:intergenic
ATCATCTTCGGTAGTGCAAC+TGG 0.442795 3_2:-18872087 None:intergenic
TTCTGAACGGTGATCATCTT+CGG 0.442890 3_2:-18872099 None:intergenic
ACCCATTTGGCTAATACTTC+AGG 0.444814 3_2:+18871817 Msa0398200:CDS
TCTAGCCTTGATGATGAAGT+TGG 0.445677 3_2:+18872404 Msa0398200:CDS
GAAATAAAAGAGAGAGAAAG+AGG 0.447309 3_2:-18870403 None:intergenic
ATGGACATCCTAGAGGGGCT+GGG 0.451477 3_2:+18872024 Msa0398200:CDS
ACCTGAAGTATTAGCCAAAT+GGG 0.451907 3_2:-18871818 None:intergenic
AGAGTGGGAATGGTGATCAT+TGG 0.452381 3_2:+18873149 Msa0398200:CDS
TGATCAGCTCCAACTGATAC+AGG 0.454985 3_2:-18872257 None:intergenic
GATGGACATCCTAGAGGGGC+TGG 0.457386 3_2:+18872023 Msa0398200:CDS
GATTGAATCGATCGGAAGAA+AGG 0.459888 3_2:-18870601 None:intergenic
GTTCCAGAAATTCTTGTTGA+GGG 0.466806 3_2:-18872639 None:intergenic
CTTGATGATGAAGTTGGAAA+AGG 0.469243 3_2:+18872410 Msa0398200:CDS
AGGCTAGATAATTCCATCTC+AGG 0.474272 3_2:-18872389 None:intergenic
ATCTTGCTCTAAAAGTAAGA+TGG 0.482487 3_2:+18873261 Msa0398200:CDS
AGCATCTCCTCAGCATCAAA+AGG 0.482810 3_2:-18871706 None:intergenic
CAATGAATTTCTCAATCCCA+AGG 0.484694 3_2:-18872520 None:intergenic
TGATGATTGCGACACCCATT+TGG 0.484841 3_2:+18871804 Msa0398200:CDS
TGAAAACGGTAGATAATCAC+TGG 0.487360 3_2:-18871764 None:intergenic
AAAACGCGGCGGAAGAAGAA+AGG 0.487684 3_2:-18870526 None:intergenic
AAACGCGGCGGAAGAAGAAA+GGG 0.488317 3_2:-18870525 None:intergenic
CTGGAGCATTGTGATGCACC+AGG 0.488708 3_2:+18873220 Msa0398200:CDS
CATCCCCATCCCAAACATTG+AGG 0.498295 3_2:-18872325 None:intergenic
CAAACCTCAATGTTTGGGAT+GGG 0.499908 3_2:+18872321 Msa0398200:CDS
AGAATTTCACGATCTATTCG+AGG 0.500244 3_2:-18870623 None:intergenic
TGGGTGTCGCAATCATCATC+AGG 0.505398 3_2:-18871799 None:intergenic
GAATTGGGGTTTGCTGGCAT+GGG 0.506212 3_2:+18872542 Msa0398200:CDS
TGGACATCCTAGAGGGGCTG+GGG 0.508901 3_2:+18872025 Msa0398200:CDS
TCAAGCTGATGTACCTGCAT+GGG 0.510558 3_2:+18872280 Msa0398200:CDS
GAAATCGAAGGTGAAATTGA+AGG 0.511975 3_2:-18870574 None:intergenic
GATAATTCCATCTCAGGCAT+AGG 0.519691 3_2:-18872383 None:intergenic
TTGAGAAATTCATTGAATTG+GGG 0.521028 3_2:+18872528 Msa0398200:CDS
TCAAACCTCAATGTTTGGGA+TGG 0.524692 3_2:+18872320 Msa0398200:CDS
TTAGAGCAAGATACAAAGCC+AGG 0.525570 3_2:-18873250 None:intergenic
ACCATTCCCACTCTTCACCT+TGG 0.525767 3_2:-18873140 None:intergenic
GAGAGACCAAGGTGAAGAGT+GGG 0.526119 3_2:+18873134 Msa0398200:CDS
TGATGCTGAGGAGATGCTTG+AGG 0.526167 3_2:+18871711 Msa0398200:CDS
CCCTCTAGGATGTCCATCAC+AGG 0.527463 3_2:-18872018 None:intergenic
CCTCGCAAGCCTGTATCAGT+TGG 0.530589 3_2:+18872248 Msa0398200:CDS
CCCATGTCATGTGATGTGTA+TGG 0.535319 3_2:-18873100 None:intergenic
TATTATCCCTATGCCTGAGA+TGG 0.538511 3_2:+18872376 Msa0398200:CDS
CTCAGGCATAGGGATAATAC+AGG 0.539552 3_2:-18872372 None:intergenic
TGCTTTCTTGCAGGCAACAA+TGG 0.540913 3_2:+18871672 Msa0398200:intron
ATAATTCCATCTCAGGCATA+GGG 0.542120 3_2:-18872382 None:intergenic
AAACCTCAATGTTTGGGATG+GGG 0.542867 3_2:+18872322 Msa0398200:CDS
GGAGAGTCCCCAGCCCCTCT+AGG 0.543130 3_2:-18872032 None:intergenic
ACCAAGGTGAAGAGTGGGAA+TGG 0.543330 3_2:+18873139 Msa0398200:CDS
AAATAAAAGAGAGAGAAAGA+GGG 0.552041 3_2:-18870402 None:intergenic
GAGAACAAGTGGCTCAAAAG+TGG 0.552554 3_2:+18872564 Msa0398200:CDS
GCTTGCGAGGAGAATGTTCA+AGG 0.553211 3_2:-18872235 None:intergenic
TCAGTCCAGAACGACCCATA+AGG 0.556681 3_2:+18872180 Msa0398200:CDS
AGTTCCAGAAATTCTTGTTG+AGG 0.557435 3_2:-18872640 None:intergenic
GTTCTGGACTGAAGTACTCA+TGG 0.558958 3_2:-18872145 None:intergenic
AGAGAGACCAAGGTGAAGAG+TGG 0.559975 3_2:+18873133 Msa0398200:CDS
TTCAAACACCCGAAACATGC+AGG 0.560228 3_2:+18871739 Msa0398200:CDS
GTAAGCAATGGTTACAGCCA+AGG 0.561471 3_2:+18873190 Msa0398200:CDS
GTTCAAGGAGTATGGAATAG+AGG 0.561760 3_2:-18872220 None:intergenic
TGCTGGCATGGGAGAACAAG+TGG 0.566560 3_2:+18872553 Msa0398200:CDS
CACTATCAGCACTTAATAGG+TGG 0.573148 3_2:-18872760 None:intergenic
ATCAAGCTGATGTACCTGCA+TGG 0.574206 3_2:+18872279 Msa0398200:CDS
TTACAGCCAAGGGTATGTGC+TGG 0.575897 3_2:+18873201 Msa0398200:CDS
AACTATACTGGAGTAAGCAA+TGG 0.582206 3_2:+18873178 Msa0398200:CDS
TCCATACACATCACATGACA+TGG 0.582605 3_2:+18873099 Msa0398200:CDS
CTTGCTGTTGAAACCTGTGA+TGG 0.582868 3_2:+18872005 Msa0398200:CDS
AATGCTCCAGCACATACCCT+TGG 0.585409 3_2:-18873207 None:intergenic
GAAGCAGGAATACCTATCAC+AGG 0.590260 3_2:-18872053 None:intergenic
TCTTCTATCATGCTACATGT+AGG 0.594709 3_2:-18873292 None:intergenic
CCTGTGATGGACATCCTAGA+GGG 0.599466 3_2:+18872018 Msa0398200:CDS
CTGATAGTGATAATGATGAA+TGG 0.603537 3_2:+18872774 Msa0398200:CDS
AATGAATTTCTCAATCCCAA+GGG 0.607074 3_2:-18872519 None:intergenic
TAAGCAATGGTTACAGCCAA+GGG 0.614655 3_2:+18873191 Msa0398200:CDS
TTAGCTCGGATCGAGAAGAT+CGG 0.616739 3_2:-18870709 None:intergenic
GATGTATAGGCTGTTCTGAA+CGG 0.621550 3_2:-18872112 None:intergenic
GATTGTAGCTGCGAGGACAG+TGG 0.623911 3_2:+18872440 Msa0398200:CDS
CATAAGGACATTTACTCATG+AGG 0.628656 3_2:+18872196 Msa0398200:CDS
TATTCGAGGATTGAATCGAT+CGG 0.630167 3_2:-18870609 None:intergenic
CTGGTGGCCCAAGAAGAAGC+AGG 0.631250 3_2:-18872068 None:intergenic
CCAACTGATACAGGCTTGCG+AGG 0.632606 3_2:-18872248 None:intergenic
CGGATCGAGAAGATCGGAGA+CGG 0.634591 3_2:-18870703 None:intergenic
AAAGGATTGAGATGTGAGTG+CGG 0.641039 3_2:-18870365 None:intergenic
GCATTGTGATGCACCAGGGT+GGG 0.646215 3_2:+18873225 Msa0398200:CDS
ACAAAGCCAGGATCCCACCC+TGG 0.650732 3_2:-18873238 None:intergenic
ATCTTCGGTAGTGCAACTGG+TGG 0.650760 3_2:-18872084 None:intergenic
TACATGTAGCATGATAGAAG+AGG 0.651894 3_2:+18873294 Msa0398200:CDS
AGTTGCTTCAAGAGAGACCA+AGG 0.656150 3_2:+18873123 Msa0398200:CDS
CAAGCTGATGTACCTGCATG+GGG 0.658662 3_2:+18872281 Msa0398200:CDS
ATGAGTACTTCAGTCCAGAA+CGG 0.667987 3_2:+18872147 Msa0398200:CDS
AGATGAGCATCTATTTCACA+AGG 0.669130 3_2:+18872595 Msa0398200:CDS
GATGTGAGTGCGGTATATAT+GGG 0.670975 3_2:-18870355 None:intergenic
ACCTGTGATGGACATCCTAG+AGG 0.674785 3_2:+18872017 Msa0398200:CDS
AACGCGGCGGAAGAAGAAAG+GGG 0.679599 3_2:-18870524 None:intergenic
TGGAGCATTGTGATGCACCA+GGG 0.681363 3_2:+18873221 Msa0398200:CDS
AAGAAAGGAGAAGAAATCGA+AGG 0.682618 3_2:-18870586 None:intergenic
AGTGGGAATGGTGATCATTG+GGG 0.687140 3_2:+18873151 Msa0398200:CDS
CCATACACATCACATGACAT+GGG 0.689211 3_2:+18873100 Msa0398200:CDS
GAAAACGGTAGATAATCACT+GGG 0.690113 3_2:-18871763 None:intergenic
AGCATTGTGATGCACCAGGG+TGG 0.699405 3_2:+18873224 Msa0398200:CDS
CTGTGATGGACATCCTAGAG+GGG 0.704316 3_2:+18872019 Msa0398200:CDS
AGTGATAATGATGAATGGCA+AGG 0.715180 3_2:+18872779 Msa0398200:CDS
ATAGAGGAAGGATATGCACA+AGG 0.716188 3_2:+18871960 Msa0398200:intron
AAGAACTGATTGTAGCTGCG+AGG 0.720002 3_2:+18872433 Msa0398200:CDS
GAGGAAGGATATGCACAAGG+TGG 0.730040 3_2:+18871963 Msa0398200:intron
ATCGAGATCTGAAAACGCGG+CGG 0.744415 3_2:-18870537 None:intergenic
GGAATCGAGATCTGAAAACG+CGG 0.748403 3_2:-18870540 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TGGATTTTATTTTATTTTTA+GGG - chr3_2:18870487-18870506 None:intergenic 10.0%
!!! AATTTTTCTTTAATTGATTT+GGG + chr3_2:18870739-18870758 Msa0398200:intron 10.0%
!!! TTGTTTTATTGAAATTTATT+TGG + chr3_2:18870972-18870991 Msa0398200:intron 10.0%
!!! TGTTTTATTGAAATTTATTT+GGG + chr3_2:18870973-18870992 Msa0398200:intron 10.0%
!!! AAAAATCATATTTTTTTTTG+TGG + chr3_2:18871139-18871158 Msa0398200:intron 10.0%
!!! AAAATCATATTTTTTTTTGT+GGG + chr3_2:18871140-18871159 Msa0398200:intron 10.0%
!!! TTTTTTTGAAATTTATTTTC+TGG + chr3_2:18871190-18871209 Msa0398200:intron 10.0%
!!! TTTTATTTTATTTTTAGGGT+TGG - chr3_2:18870483-18870502 None:intergenic 15.0%
!!! GTGGATTTTATTTTATTTTT+AGG - chr3_2:18870488-18870507 None:intergenic 15.0%
!!! CAATTTTTCTTTAATTGATT+TGG + chr3_2:18870738-18870757 Msa0398200:intron 15.0%
!!! GTTTTATTGAAATTTATTTG+GGG + chr3_2:18870974-18870993 Msa0398200:intron 15.0%
!!! TTTTTATTATACCTTAAACA+CGG - chr3_2:18871081-18871100 None:intergenic 15.0%
!! AAATTGAAGGAAAAAGAAAA+GGG - chr3_2:18870564-18870583 None:intergenic 20.0%
!! TGGTAGATTTGAAAAAAATT+AGG + chr3_2:18870920-18870939 Msa0398200:intron 20.0%
!! GGTAGATTTGAAAAAAATTA+GGG + chr3_2:18870921-18870940 Msa0398200:intron 20.0%
!! ATTTGAAAAAAATTAGGGTT+AGG + chr3_2:18870926-18870945 Msa0398200:intron 20.0%
!! TTTGAAAAAAATTAGGGTTA+GGG + chr3_2:18870927-18870946 Msa0398200:intron 20.0%
!!! TATTTTCTGGTTAAAAGTTT+TGG + chr3_2:18871203-18871222 Msa0398200:intron 20.0%
!! ACTATGTAATATACATTTCA+AGG + chr3_2:18871880-18871899 Msa0398200:intron 20.0%
!! AAAAAACTATTAAAAACCCT+TGG + chr3_2:18872503-18872522 Msa0398200:CDS 20.0%
!! AAAAACTATTAAAAACCCTT+GGG + chr3_2:18872504-18872523 Msa0398200:CDS 20.0%
!! ATTGAGAAATTCATTGAATT+GGG + chr3_2:18872527-18872546 Msa0398200:CDS 20.0%
! AAATAAAAGAGAGAGAAAGA+GGG - chr3_2:18870405-18870424 None:intergenic 25.0%
! GAAATTGAAGGAAAAAGAAA+AGG - chr3_2:18870565-18870584 None:intergenic 25.0%
! AAAAATTGAAACCTTTAGCT+CGG - chr3_2:18870726-18870745 None:intergenic 25.0%
!!! AAGCTTGATTTGTTCTTAAT+TGG + chr3_2:18870900-18870919 Msa0398200:intron 25.0%
! TTGTATAATTACGATTCTCT+TGG + chr3_2:18871010-18871029 Msa0398200:intron 25.0%
! TAATTGCAAATTGCTGAATT+TGG - chr3_2:18871046-18871065 None:intergenic 25.0%
!!! TGCAAAATATCTTACTTTTG+AGG + chr3_2:18871452-18871471 Msa0398200:intron 25.0%
!! GTTTTTAATCTTGTGCAATT+TGG + chr3_2:18871850-18871869 Msa0398200:intron 25.0%
! ATGTGTAAGACAACATATAA+TGG + chr3_2:18872472-18872491 Msa0398200:CDS 25.0%
! GATTGAGAAATTCATTGAAT+TGG + chr3_2:18872526-18872545 Msa0398200:CDS 25.0%
! TTGAGAAATTCATTGAATTG+GGG + chr3_2:18872528-18872547 Msa0398200:CDS 25.0%
! GATGAAAATTGTGATGTTAA+TGG + chr3_2:18872941-18872960 Msa0398200:intron 25.0%
AGGGATATATGAAGAGAAAA+AGG - chr3_2:18870386-18870405 None:intergenic 30.0%
GAAATAAAAGAGAGAGAAAG+AGG - chr3_2:18870406-18870425 None:intergenic 30.0%
TGAGGAAAAATAAACGTGTT+TGG - chr3_2:18870440-18870459 None:intergenic 30.0%
GAATCGAATCGAACAAAATT+GGG - chr3_2:18870661-18870680 None:intergenic 30.0%
TGAATCGAATCGAACAAAAT+TGG - chr3_2:18870662-18870681 None:intergenic 30.0%
! ATTCACGTTTTCGGTTTTTA+GGG + chr3_2:18870677-18870696 Msa0398200:five_prime_UTR 30.0%
!!! TCGATTTGTTGTTTTCGATT+TGG + chr3_2:18870780-18870799 Msa0398200:intron 30.0%
!!! CGATTTGTTGTTTTCGATTT+GGG + chr3_2:18870781-18870800 Msa0398200:intron 30.0%
!!! GATTTGTTGTTTTCGATTTG+GGG + chr3_2:18870782-18870801 Msa0398200:intron 30.0%
! TCTTCGTTCGAATTTTTGTT+TGG + chr3_2:18870833-18870852 Msa0398200:intron 30.0%
!!! TAAAAGTTTTGGAAGTGATG+TGG + chr3_2:18871214-18871233 Msa0398200:intron 30.0%
CATTGTATCATCATCATAGA+AGG - chr3_2:18871307-18871326 None:intergenic 30.0%
TGAAGTCAGAACTTAACATA+AGG + chr3_2:18871375-18871394 Msa0398200:intron 30.0%
GAAGTCAGAACTTAACATAA+GGG + chr3_2:18871376-18871395 Msa0398200:intron 30.0%
TTTATTGAATGCTTTCTTGC+AGG + chr3_2:18871663-18871682 Msa0398200:intron 30.0%
! GGAAAAACAGATTCTGAAAA+CGG - chr3_2:18871781-18871800 None:intergenic 30.0%
GTCTACATTGTAATTCATAG+AGG + chr3_2:18871944-18871963 Msa0398200:intron 30.0%
ACATTGTAATTCATAGAGGA+AGG + chr3_2:18871948-18871967 Msa0398200:intron 30.0%
TCATGAGTAAATGTCCTTAT+GGG - chr3_2:18872197-18872216 None:intergenic 30.0%
AGATTCAAACCTCAATGTTT+GGG + chr3_2:18872316-18872335 Msa0398200:CDS 30.0%
TGAAGCTGAAAAAAGAATGA+TGG + chr3_2:18872346-18872365 Msa0398200:CDS 30.0%
GAAGCTGAAAAAAGAATGAT+GGG + chr3_2:18872347-18872366 Msa0398200:CDS 30.0%
AAGCTGAAAAAAGAATGATG+GGG + chr3_2:18872348-18872367 Msa0398200:CDS 30.0%
AATGAATTTCTCAATCCCAA+GGG - chr3_2:18872522-18872541 None:intergenic 30.0%
TATCACTATCAGCACTTAAT+AGG - chr3_2:18872766-18872785 None:intergenic 30.0%
! CTGATAGTGATAATGATGAA+TGG + chr3_2:18872774-18872793 Msa0398200:CDS 30.0%
CAAGTATCATCTTCATAGAT+GGG - chr3_2:18872863-18872882 None:intergenic 30.0%
ACAAGTATCATCTTCATAGA+TGG - chr3_2:18872864-18872883 None:intergenic 30.0%
TGTTAATGGAATAGTAGATC+AGG + chr3_2:18872955-18872974 Msa0398200:intron 30.0%
!! ATCTTGCTCTAAAAGTAAGA+TGG + chr3_2:18873261-18873280 Msa0398200:CDS 30.0%
GAAGAAAGGGGAAAAAACTA+GGG - chr3_2:18870515-18870534 None:intergenic 35.0%
AGAAGAAAGGGGAAAAAACT+AGG - chr3_2:18870516-18870535 None:intergenic 35.0%
GAAATCGAAGGTGAAATTGA+AGG - chr3_2:18870577-18870596 None:intergenic 35.0%
AAGAAAGGAGAAGAAATCGA+AGG - chr3_2:18870589-18870608 None:intergenic 35.0%
TATTCGAGGATTGAATCGAT+CGG - chr3_2:18870612-18870631 None:intergenic 35.0%
AGAATTTCACGATCTATTCG+AGG - chr3_2:18870626-18870645 None:intergenic 35.0%
!! TTCGATTCGATTCACGTTTT+CGG + chr3_2:18870668-18870687 Msa0398200:five_prime_UTR 35.0%
! GATTCACGTTTTCGGTTTTT+AGG + chr3_2:18870676-18870695 Msa0398200:five_prime_UTR 35.0%
!! ATTTTCCACGGGTTTGATTT+TGG + chr3_2:18870807-18870826 Msa0398200:intron 35.0%
!! TTTTCCACGGGTTTGATTTT+GGG + chr3_2:18870808-18870827 Msa0398200:intron 35.0%
ATCATCATCATAGAAGGAGT+GGG - chr3_2:18871301-18871320 None:intergenic 35.0%
TATCATCATCATAGAAGGAG+TGG - chr3_2:18871302-18871321 None:intergenic 35.0%
AACGGAAAACACTATGAATG+AGG - chr3_2:18871569-18871588 None:intergenic 35.0%
AAGTCGATGAGCTATCAAAT+TGG + chr3_2:18871590-18871609 Msa0398200:intron 35.0%
GAAAACGGTAGATAATCACT+GGG - chr3_2:18871766-18871785 None:intergenic 35.0%
TGAAAACGGTAGATAATCAC+TGG - chr3_2:18871767-18871786 None:intergenic 35.0%
! ACCTGAAGTATTAGCCAAAT+GGG - chr3_2:18871821-18871840 None:intergenic 35.0%
ATTTGGCTAATACTTCAGGT+GGG + chr3_2:18871821-18871840 Msa0398200:intron 35.0%
TGGAAAAAGGGAAGATGTAT+AGG - chr3_2:18872128-18872147 None:intergenic 35.0%
! CTGAAGTACTCATGGAAAAA+GGG - chr3_2:18872140-18872159 None:intergenic 35.0%
! ACTGAAGTACTCATGGAAAA+AGG - chr3_2:18872141-18872160 None:intergenic 35.0%
! CGTTCTGGACTGAAATATAT+TGG - chr3_2:18872173-18872192 None:intergenic 35.0%
CTCATGAGTAAATGTCCTTA+TGG - chr3_2:18872198-18872217 None:intergenic 35.0%
CATAAGGACATTTACTCATG+AGG + chr3_2:18872196-18872215 Msa0398200:CDS 35.0%
CAGATTCAAACCTCAATGTT+TGG + chr3_2:18872315-18872334 Msa0398200:CDS 35.0%
ATAATTCCATCTCAGGCATA+GGG - chr3_2:18872385-18872404 None:intergenic 35.0%
! CTTTTCCAACTTCATCATCA+AGG - chr3_2:18872412-18872431 None:intergenic 35.0%
!! CTTGATGATGAAGTTGGAAA+AGG + chr3_2:18872410-18872429 Msa0398200:CDS 35.0%
CAATGAATTTCTCAATCCCA+AGG - chr3_2:18872523-18872542 None:intergenic 35.0%
AGATGAGCATCTATTTCACA+AGG + chr3_2:18872595-18872614 Msa0398200:CDS 35.0%
GTTCCAGAAATTCTTGTTGA+GGG - chr3_2:18872642-18872661 None:intergenic 35.0%
AGTTCCAGAAATTCTTGTTG+AGG - chr3_2:18872643-18872662 None:intergenic 35.0%
! AGTGATAATGATGAATGGCA+AGG + chr3_2:18872779-18872798 Msa0398200:CDS 35.0%
ATCACCATCAATGTTACTCT+TGG - chr3_2:18872981-18873000 None:intergenic 35.0%
!! CTTTTTCATCCCAAACATGT+TGG - chr3_2:18873069-18873088 None:intergenic 35.0%
AACTATACTGGAGTAAGCAA+TGG + chr3_2:18873178-18873197 Msa0398200:CDS 35.0%
TCTTCTATCATGCTACATGT+AGG - chr3_2:18873295-18873314 None:intergenic 35.0%
TACATGTAGCATGATAGAAG+AGG + chr3_2:18873294-18873313 Msa0398200:CDS 35.0%
! AGCATGATAGAAGAGGTTTT+TGG + chr3_2:18873301-18873320 Msa0398200:CDS 35.0%
!! ATAGAAGAGGTTTTTGGAGA+TGG + chr3_2:18873307-18873326 Msa0398200:CDS 35.0%
GATGTGAGTGCGGTATATAT+GGG - chr3_2:18870358-18870377 None:intergenic 40.0%
AGATGTGAGTGCGGTATATA+TGG - chr3_2:18870359-18870378 None:intergenic 40.0%
AAAGGATTGAGATGTGAGTG+CGG - chr3_2:18870368-18870387 None:intergenic 40.0%
AAGGGGAAAAAACTAGGGTT+AGG - chr3_2:18870510-18870529 None:intergenic 40.0%
GATTGAATCGATCGGAAGAA+AGG - chr3_2:18870604-18870623 None:intergenic 40.0%
!! CGATTTGGGGAAATTTTCCA+CGG + chr3_2:18870795-18870814 Msa0398200:intron 40.0%
! GATTTGGGGAAATTTTCCAC+GGG + chr3_2:18870796-18870815 Msa0398200:intron 40.0%
GGTTAGGGTTTCCTGAATTT+GGG + chr3_2:18870942-18870961 Msa0398200:intron 40.0%
GTTAGGGTTTCCTGAATTTG+GGG + chr3_2:18870943-18870962 Msa0398200:intron 40.0%
ACAAGAAAAGCCCCAAATTC+AGG - chr3_2:18870956-18870975 None:intergenic 40.0%
TTTGACAGAGACCGTGTTTA+AGG + chr3_2:18871067-18871086 Msa0398200:intron 40.0%
TGCATGTCCTTTCATTGAGT+AGG + chr3_2:18871275-18871294 Msa0398200:intron 40.0%
!! TGATAGCTCATCGACTTCAA+CGG - chr3_2:18871587-18871606 None:intergenic 40.0%
ACCCATTTGGCTAATACTTC+AGG + chr3_2:18871817-18871836 Msa0398200:CDS 40.0%
! CACCTGAAGTATTAGCCAAA+TGG - chr3_2:18871822-18871841 None:intergenic 40.0%
CATTTGGCTAATACTTCAGG+TGG + chr3_2:18871820-18871839 Msa0398200:intron 40.0%
ATAGAGGAAGGATATGCACA+AGG + chr3_2:18871960-18871979 Msa0398200:intron 40.0%
TAGGTATTCCTGCTTCTTCT+TGG + chr3_2:18872060-18872079 Msa0398200:CDS 40.0%
AGGTATTCCTGCTTCTTCTT+GGG + chr3_2:18872061-18872080 Msa0398200:CDS 40.0%
TTCTGAACGGTGATCATCTT+CGG - chr3_2:18872102-18872121 None:intergenic 40.0%
! GATGTATAGGCTGTTCTGAA+CGG - chr3_2:18872115-18872134 None:intergenic 40.0%
ATGAGTACTTCAGTCCAGAA+CGG + chr3_2:18872147-18872166 Msa0398200:CDS 40.0%
CTGAAATATATTGGCCGTTC+TGG - chr3_2:18872164-18872183 None:intergenic 40.0%
! GTTCAAGGAGTATGGAATAG+AGG - chr3_2:18872223-18872242 None:intergenic 40.0%
AGGAGAATGTTCAAGGAGTA+TGG - chr3_2:18872231-18872250 None:intergenic 40.0%
TCAAACCTCAATGTTTGGGA+TGG + chr3_2:18872320-18872339 Msa0398200:CDS 40.0%
! CAAACCTCAATGTTTGGGAT+GGG + chr3_2:18872321-18872340 Msa0398200:CDS 40.0%
! AAACCTCAATGTTTGGGATG+GGG + chr3_2:18872322-18872341 Msa0398200:CDS 40.0%
TATTATCCCTATGCCTGAGA+TGG + chr3_2:18872376-18872395 Msa0398200:CDS 40.0%
GATAATTCCATCTCAGGCAT+AGG - chr3_2:18872386-18872405 None:intergenic 40.0%
AGGCTAGATAATTCCATCTC+AGG - chr3_2:18872392-18872411 None:intergenic 40.0%
!! TCTAGCCTTGATGATGAAGT+TGG + chr3_2:18872404-18872423 Msa0398200:CDS 40.0%
TTCATTGAATTGGGGTTTGC+TGG + chr3_2:18872536-18872555 Msa0398200:CDS 40.0%
AAATTCTTGTTGAGGGATGC+TGG - chr3_2:18872635-18872654 None:intergenic 40.0%
CATCCCTCAACAAGAATTTC+TGG + chr3_2:18872636-18872655 Msa0398200:CDS 40.0%
! TTTTCCCTCACGAAGCAAAA+AGG + chr3_2:18872676-18872695 Msa0398200:CDS 40.0%
! ATCTCCTTTTTGCTTCGTGA+GGG - chr3_2:18872683-18872702 None:intergenic 40.0%
! TATCTCCTTTTTGCTTCGTG+AGG - chr3_2:18872684-18872703 None:intergenic 40.0%
CACTATCAGCACTTAATAGG+TGG - chr3_2:18872763-18872782 None:intergenic 40.0%
AGAATCCTCATCTTCCTCAT+GGG - chr3_2:18872828-18872847 None:intergenic 40.0%
CCTCTAAGTGATCATCATTG+CGG - chr3_2:18872898-18872917 None:intergenic 40.0%
TCCATACACATCACATGACA+TGG + chr3_2:18873099-18873118 Msa0398200:CDS 40.0%
CCATACACATCACATGACAT+GGG + chr3_2:18873100-18873119 Msa0398200:CDS 40.0%
TAAGCAATGGTTACAGCCAA+GGG + chr3_2:18873191-18873210 Msa0398200:CDS 40.0%
TTAGAGCAAGATACAAAGCC+AGG - chr3_2:18873253-18873272 None:intergenic 40.0%
! AGAGAAACGACAGCGTTTTG+AGG - chr3_2:18870458-18870477 None:intergenic 45.0%
GGGAAAAAACTAGGGTTAGG+TGG - chr3_2:18870507-18870526 None:intergenic 45.0%
GGAATCGAGATCTGAAAACG+CGG - chr3_2:18870543-18870562 None:intergenic 45.0%
TTAGCTCGGATCGAGAAGAT+CGG - chr3_2:18870712-18870731 None:intergenic 45.0%
ATCTTCTCGATCCGAGCTAA+AGG + chr3_2:18870712-18870731 Msa0398200:five_prime_UTR 45.0%
GAATCCCAAAATCAAACCCG+TGG - chr3_2:18870815-18870834 None:intergenic 45.0%
GGGTTAGGGTTTCCTGAATT+TGG + chr3_2:18870941-18870960 Msa0398200:intron 45.0%
TGCTTTCTTGCAGGCAACAA+TGG + chr3_2:18871672-18871691 Msa0398200:intron 45.0%
! GAAACGTCCTTTTGATGCTG+AGG + chr3_2:18871699-18871718 Msa0398200:CDS 45.0%
AGCATCTCCTCAGCATCAAA+AGG - chr3_2:18871709-18871728 None:intergenic 45.0%
TTCAAACACCCGAAACATGC+AGG + chr3_2:18871739-18871758 Msa0398200:CDS 45.0%
TGATGATTGCGACACCCATT+TGG + chr3_2:18871804-18871823 Msa0398200:CDS 45.0%
!! CTTGCTGTTGAAACCTGTGA+TGG + chr3_2:18872005-18872024 Msa0398200:CDS 45.0%
GAAGCAGGAATACCTATCAC+AGG - chr3_2:18872056-18872075 None:intergenic 45.0%
ATCATCTTCGGTAGTGCAAC+TGG - chr3_2:18872090-18872109 None:intergenic 45.0%
! GTTCTGGACTGAAGTACTCA+TGG - chr3_2:18872148-18872167 None:intergenic 45.0%
AATGTCCTTATGGGTCGTTC+TGG - chr3_2:18872188-18872207 None:intergenic 45.0%
TGATCAGCTCCAACTGATAC+AGG - chr3_2:18872260-18872279 None:intergenic 45.0%
ATCAAGCTGATGTACCTGCA+TGG + chr3_2:18872279-18872298 Msa0398200:CDS 45.0%
TCAAGCTGATGTACCTGCAT+GGG + chr3_2:18872280-18872299 Msa0398200:CDS 45.0%
! TACCTGCATGGGGTTTTTCT+AGG + chr3_2:18872291-18872310 Msa0398200:CDS 45.0%
CTCAGGCATAGGGATAATAC+AGG - chr3_2:18872375-18872394 None:intergenic 45.0%
AAGAACTGATTGTAGCTGCG+AGG + chr3_2:18872433-18872452 Msa0398200:CDS 45.0%
GAGAACAAGTGGCTCAAAAG+TGG + chr3_2:18872564-18872583 Msa0398200:CDS 45.0%
GCTTCGTGAGGGAAAAACAA+TGG - chr3_2:18872672-18872691 None:intergenic 45.0%
CAATGAAGTTGCTACCCATG+AGG + chr3_2:18872811-18872830 Msa0398200:intron 45.0%
CAGAATCCTCATCTTCCTCA+TGG - chr3_2:18872829-18872848 None:intergenic 45.0%
CCGCAATGATGATCACTTAG+AGG + chr3_2:18872895-18872914 Msa0398200:intron 45.0%
CAGGCCAAGAGTAACATTGA+TGG + chr3_2:18872974-18872993 Msa0398200:intron 45.0%
CTTGATATGCATCACTCTCG+TGG + chr3_2:18873016-18873035 Msa0398200:intron 45.0%
ATCCCAAACATGTTGGTCCT+GGG - chr3_2:18873062-18873081 None:intergenic 45.0%
CCCATGTCATGTGATGTGTA+TGG - chr3_2:18873103-18873122 None:intergenic 45.0%
AGTTGCTTCAAGAGAGACCA+AGG + chr3_2:18873123-18873142 Msa0398200:CDS 45.0%
AGAGTGGGAATGGTGATCAT+TGG + chr3_2:18873149-18873168 Msa0398200:CDS 45.0%
GAGTGGGAATGGTGATCATT+GGG + chr3_2:18873150-18873169 Msa0398200:CDS 45.0%
AGTGGGAATGGTGATCATTG+GGG + chr3_2:18873151-18873170 Msa0398200:CDS 45.0%
CATTGGGGCAGTAACTATAC+TGG + chr3_2:18873166-18873185 Msa0398200:CDS 45.0%
GTAAGCAATGGTTACAGCCA+AGG + chr3_2:18873190-18873209 Msa0398200:CDS 45.0%
!! AGGTTTTTGGAGATGGACGA+AGG + chr3_2:18873314-18873333 Msa0398200:CDS 45.0%
AAACGCGGCGGAAGAAGAAA+GGG - chr3_2:18870528-18870547 None:intergenic 50.0%
AAAACGCGGCGGAAGAAGAA+AGG - chr3_2:18870529-18870548 None:intergenic 50.0%
ATCGAGATCTGAAAACGCGG+CGG - chr3_2:18870540-18870559 None:intergenic 50.0%
GAGTGGGCCTACTCAATGAA+AGG - chr3_2:18871285-18871304 None:intergenic 50.0%
TGATGCTGAGGAGATGCTTG+AGG + chr3_2:18871711-18871730 Msa0398200:CDS 50.0%
TCACTGGGACCTGCATGTTT+CGG - chr3_2:18871751-18871770 None:intergenic 50.0%
! TGGGTGTCGCAATCATCATC+AGG - chr3_2:18871802-18871821 None:intergenic 50.0%
GAGGAAGGATATGCACAAGG+TGG + chr3_2:18871963-18871982 Msa0398200:intron 50.0%
!! ACCTGTGATGGACATCCTAG+AGG + chr3_2:18872017-18872036 Msa0398200:CDS 50.0%
!! CCTGTGATGGACATCCTAGA+GGG + chr3_2:18872018-18872037 Msa0398200:CDS 50.0%
!! CTGTGATGGACATCCTAGAG+GGG + chr3_2:18872019-18872038 Msa0398200:CDS 50.0%
ATCTTCGGTAGTGCAACTGG+TGG - chr3_2:18872087-18872106 None:intergenic 50.0%
TCAGTCCAGAACGACCCATA+AGG + chr3_2:18872180-18872199 Msa0398200:CDS 50.0%
GCTTGCGAGGAGAATGTTCA+AGG - chr3_2:18872238-18872257 None:intergenic 50.0%
CAAGCTGATGTACCTGCATG+GGG + chr3_2:18872281-18872300 Msa0398200:CDS 50.0%
GACCTAGAAAAACCCCATGC+AGG - chr3_2:18872296-18872315 None:intergenic 50.0%
CATCCCCATCCCAAACATTG+AGG - chr3_2:18872328-18872347 None:intergenic 50.0%
!! TGAATTGGGGTTTGCTGGCA+TGG + chr3_2:18872541-18872560 Msa0398200:CDS 50.0%
!! GAATTGGGGTTTGCTGGCAT+GGG + chr3_2:18872542-18872561 Msa0398200:CDS 50.0%
TGCTACCCATGAGGAAGATG+AGG + chr3_2:18872820-18872839 Msa0398200:intron 50.0%
CTGGGCTTGAATCAGATGAG+GGG - chr3_2:18873044-18873063 None:intergenic 50.0%
CCTGGGCTTGAATCAGATGA+GGG - chr3_2:18873045-18873064 None:intergenic 50.0%
TCCTGGGCTTGAATCAGATG+AGG - chr3_2:18873046-18873065 None:intergenic 50.0%
AAGCCCAGGACCAACATGTT+TGG + chr3_2:18873056-18873075 Msa0398200:intron 50.0%
AGCCCAGGACCAACATGTTT+GGG + chr3_2:18873057-18873076 Msa0398200:intron 50.0%
CATCCCAAACATGTTGGTCC+TGG - chr3_2:18873063-18873082 None:intergenic 50.0%
AGAGAGACCAAGGTGAAGAG+TGG + chr3_2:18873133-18873152 Msa0398200:CDS 50.0%
GAGAGACCAAGGTGAAGAGT+GGG + chr3_2:18873134-18873153 Msa0398200:CDS 50.0%
ACCAAGGTGAAGAGTGGGAA+TGG + chr3_2:18873139-18873158 Msa0398200:CDS 50.0%
ACCATTCCCACTCTTCACCT+TGG - chr3_2:18873143-18873162 None:intergenic 50.0%
! TTACAGCCAAGGGTATGTGC+TGG + chr3_2:18873201-18873220 Msa0398200:CDS 50.0%
AATGCTCCAGCACATACCCT+TGG - chr3_2:18873210-18873229 None:intergenic 50.0%
!! TGGAGCATTGTGATGCACCA+GGG + chr3_2:18873221-18873240 Msa0398200:CDS 50.0%
AACGCGGCGGAAGAAGAAAG+GGG - chr3_2:18870527-18870546 None:intergenic 55.0%
CGGATCGAGAAGATCGGAGA+CGG - chr3_2:18870706-18870725 None:intergenic 55.0%
CACTGGGACCTGCATGTTTC+GGG - chr3_2:18871750-18871769 None:intergenic 55.0%
!! CCCTCTAGGATGTCCATCAC+AGG - chr3_2:18872021-18872040 None:intergenic 55.0%
ATGGACATCCTAGAGGGGCT+GGG + chr3_2:18872024-18872043 Msa0398200:CDS 55.0%
CCAACTGATACAGGCTTGCG+AGG - chr3_2:18872251-18872270 None:intergenic 55.0%
CCTCGCAAGCCTGTATCAGT+TGG + chr3_2:18872248-18872267 Msa0398200:CDS 55.0%
GATTGTAGCTGCGAGGACAG+TGG + chr3_2:18872440-18872459 Msa0398200:CDS 55.0%
TGCTGGCATGGGAGAACAAG+TGG + chr3_2:18872553-18872572 Msa0398200:CDS 55.0%
GAAAGCGAGCTGAGCAGAAC+AGG + chr3_2:18872735-18872754 Msa0398200:CDS 55.0%
CCCTCATCTGATTCAAGCCC+AGG + chr3_2:18873042-18873061 Msa0398200:intron 55.0%
!! CTGGAGCATTGTGATGCACC+AGG + chr3_2:18873220-18873239 Msa0398200:CDS 55.0%
AGCATTGTGATGCACCAGGG+TGG + chr3_2:18873224-18873243 Msa0398200:CDS 55.0%
GCATTGTGATGCACCAGGGT+GGG + chr3_2:18873225-18873244 Msa0398200:CDS 55.0%
GATGGACATCCTAGAGGGGC+TGG + chr3_2:18872023-18872042 Msa0398200:CDS 60.0%
TGGACATCCTAGAGGGGCTG+GGG + chr3_2:18872025-18872044 Msa0398200:CDS 60.0%
GCTGGGGACTCTCCTGTGAT+AGG + chr3_2:18872041-18872060 Msa0398200:CDS 60.0%
CTGGTGGCCCAAGAAGAAGC+AGG - chr3_2:18872071-18872090 None:intergenic 60.0%
ACAAAGCCAGGATCCCACCC+TGG - chr3_2:18873241-18873260 None:intergenic 60.0%
GATGCACCAGGGTGGGATCC+TGG + chr3_2:18873232-18873251 Msa0398200:CDS 65.0%
GGAGAGTCCCCAGCCCCTCT+AGG - chr3_2:18872035-18872054 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 18870354 18873357 18870354 ID=Msa0398200;Name=Msa0398200
chr3_2 mRNA 18870354 18873357 18870354 ID=Msa0398200-mRNA-1;Parent=Msa0398200;Name=Msa0398200-mRNA-1;_AED=0.23;_eAED=0.23;_QI=386|0.66|0.5|1|1|1|4|0|427
chr3_2 exon 18870354 18870733 18870354 ID=Msa0398200-mRNA-1:exon:4169;Parent=Msa0398200-mRNA-1
chr3_2 exon 18871685 18871838 18871685 ID=Msa0398200-mRNA-1:exon:4170;Parent=Msa0398200-mRNA-1
chr3_2 exon 18871964 18872800 18871964 ID=Msa0398200-mRNA-1:exon:4171;Parent=Msa0398200-mRNA-1
chr3_2 exon 18873059 18873357 18873059 ID=Msa0398200-mRNA-1:exon:4172;Parent=Msa0398200-mRNA-1
chr3_2 five_prime_UTR 18870354 18870733 18870354 ID=Msa0398200-mRNA-1:five_prime_utr;Parent=Msa0398200-mRNA-1
chr3_2 five_prime_UTR 18871685 18871690 18871685 ID=Msa0398200-mRNA-1:five_prime_utr;Parent=Msa0398200-mRNA-1
chr3_2 CDS 18871691 18871838 18871691 ID=Msa0398200-mRNA-1:cds;Parent=Msa0398200-mRNA-1
chr3_2 CDS 18871964 18872800 18871964 ID=Msa0398200-mRNA-1:cds;Parent=Msa0398200-mRNA-1
chr3_2 CDS 18873059 18873357 18873059 ID=Msa0398200-mRNA-1:cds;Parent=Msa0398200-mRNA-1
Gene Sequence

>Msa0398200

ATGGTGCAGAAACGTCCTTTTGATGCTGAGGAGATGCTTGAGGTGTCATTCAAACACCCGAAACATGCAGGTCCCAGTGATTATCTACCGTTTTCAGAATCTGTTTTTCCTGATGATGATTGCGACACCCATTTGGCTAATACTTCAGAGGAAGGATATGCACAAGGTGGTAGTGATTGTAATGAGAAGCTTGCTGTTGAAACCTGTGATGGACATCCTAGAGGGGCTGGGGACTCTCCTGTGATAGGTATTCCTGCTTCTTCTTGGGCCACCAGTTGCACTACCGAAGATGATCACCGTTCAGAACAGCCTATACATCTTCCCTTTTTCCATGAGTACTTCAGTCCAGAACGGCCAATATATTTCAGTCCAGAACGACCCATAAGGACATTTACTCATGAGGACCTCTATTCCATACTCCTTGAACATTCTCCTCGCAAGCCTGTATCAGTTGGAGCTGATCATCAAGCTGATGTACCTGCATGGGGTTTTTCTAGGTCAGATTCAAACCTCAATGTTTGGGATGGGGATGAAGCTGAAAAAAGAATGATGGGGACCTGTATTATCCCTATGCCTGAGATGGAATTATCTAGCCTTGATGATGAAGTTGGAAAAGGAAGAACTGATTGTAGCTGCGAGGACAGTGGATCTATGAGATGTGTAAGACAACATATAATGGAAGAGAGAAAAAAACTATTAAAAACCCTTGGGATTGAGAAATTCATTGAATTGGGGTTTGCTGGCATGGGAGAACAAGTGGCTCAAAAGTGGACTCAAGAAGATGAGCATCTATTTCACAAGGTAGTCTTCAACAATCCAGCATCCCTCAACAAGAATTTCTGGAACTATCTTTCCATTGTTTTTCCCTCACGAAGCAAAAAGGAGATAGTGAGTTACTACTTTAATGTCTTCATGCTTCGAAAGCGAGCTGAGCAGAACAGGAACCACCTATTAAGTGCTGATAGTGATAATGATGAATGGCAAGCCCAGGACCAACATGTTTGGGATGAAAAAGTTAAACATGATCCATACACATCACATGACATGGGAGTTGCTTCAAGAGAGACCAAGGTGAAGAGTGGGAATGGTGATCATTGGGGCAGTAACTATACTGGAGTAAGCAATGGTTACAGCCAAGGGTATGTGCTGGAGCATTGTGATGCACCAGGGTGGGATCCTGGCTTTGTATCTTGCTCTAAAAGTAAGATGGATTTCTTACCTACATGTAGCATGATAGAAGAGGTTTTTGGAGATGGACGAAGGCAAGACATGAGAAGAGCTTGA

Protein sequence

>Msa0398200

MVQKRPFDAEEMLEVSFKHPKHAGPSDYLPFSESVFPDDDCDTHLANTSEEGYAQGGSDCNEKLAVETCDGHPRGAGDSPVIGIPASSWATSCTTEDDHRSEQPIHLPFFHEYFSPERPIYFSPERPIRTFTHEDLYSILLEHSPRKPVSVGADHQADVPAWGFSRSDSNLNVWDGDEAEKRMMGTCIIPMPEMELSSLDDEVGKGRTDCSCEDSGSMRCVRQHIMEERKKLLKTLGIEKFIELGFAGMGEQVAQKWTQEDEHLFHKVVFNNPASLNKNFWNYLSIVFPSRSKKEIVSYYFNVFMLRKRAEQNRNHLLSADSDNDEWQAQDQHVWDEKVKHDPYTSHDMGVASRETKVKSGNGDHWGSNYTGVSNGYSQGYVLEHCDAPGWDPGFVSCSKSKMDFLPTCSMIEEVFGDGRRQDMRRA*