Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0983130 | KAF1856882.1 | 78.193 | 642 | 93 | 8 | 34 | 658 | 223 | 834 | 0.0 | 915 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0983130 | sp|Q37680|NU5M_WHEAT | 71.036 | 473 | 97 | 3 | 186 | 658 | 50 | 482 | 0.0 | 617 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0983130 | A0A6A5LDZ3 | 78.193 | 642 | 93 | 8 | 34 | 658 | 223 | 834 | 0.0 | 915 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0697990 | Msa0983130 | 0.855703 | 5.281059e-62 | -8.615850e-47 |
| Msa0230640 | Msa0983130 | 0.805855 | 1.091370e-49 | -8.615850e-47 |
| Msa0983130 | Msa0983170 | 0.828795 | 7.371883e-55 | -8.615850e-47 |
| Msa0983130 | Msa0983190 | 0.811508 | 6.758629e-51 | -8.615850e-47 |
| Msa0983130 | Msa0983220 | 0.805467 | 1.316455e-49 | -8.615850e-47 |
| Msa0983130 | Msa0983230 | 0.922479 | 9.316295e-89 | -8.615850e-47 |
| Msa0983130 | Msa0983300 | 0.880959 | 3.571610e-70 | -8.615850e-47 |
| Msa0983130 | Msa0983350 | 0.819645 | 1.041926e-52 | -8.615850e-47 |
| Msa0983130 | Msa0983430 | 0.828810 | 7.310813e-55 | -8.615850e-47 |
| Msa0983130 | Msa0983460 | 0.839688 | 1.364720e-57 | -8.615850e-47 |
| Msa0983130 | Msa0983490 | 0.808952 | 2.404441e-50 | -8.615850e-47 |
| Msa0983130 | Msa0983520 | 0.805151 | 1.533310e-49 | -8.615850e-47 |
| Msa0983130 | Msa0983540 | 0.815483 | 9.033577e-52 | -8.615850e-47 |
| Msa0983130 | Msa1202770 | 0.808808 | 2.581616e-50 | -8.615850e-47 |
| Msa0983130 | Msa1224580 | 0.823845 | 1.112388e-53 | -8.615850e-47 |
| Msa0983130 | Msa1391970 | 0.816361 | 5.752981e-52 | -8.615850e-47 |
| Msa0983130 | Msa1392030 | 0.875130 | 3.926938e-68 | -8.615850e-47 |
| Msa0983130 | Msa1392120 | 0.844351 | 7.976946e-59 | -8.615850e-47 |
| Msa0983130 | Msa1392160 | 0.835780 | 1.375196e-56 | -8.615850e-47 |
| Msa0983130 | Msa1436930 | 0.824976 | 6.028596e-54 | -8.615850e-47 |
| Msa0595640 | Msa0983130 | 0.821839 | 3.261022e-53 | -8.615850e-47 |
| Msa0902770 | Msa0983130 | 0.831698 | 1.440758e-55 | -8.615850e-47 |
| Msa0908830 | Msa0983130 | 0.821512 | 3.882484e-53 | -8.615850e-47 |
| Msa0908850 | Msa0983130 | 0.816507 | 5.336191e-52 | -8.615850e-47 |
| Msa0920060 | Msa0983130 | 0.857963 | 1.140297e-62 | -8.615850e-47 |
| Msa0944920 | Msa0983130 | 0.808003 | 3.833287e-50 | -8.615850e-47 |
| Msa0944940 | Msa0983130 | 0.828113 | 1.077030e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0983130 | MtrunA17_MTg0490331 | 100.000 | 324 | 0 | 0 | 336 | 659 | 76 | 399 | 0.0 | 654 |
| Msa0983130 | MtrunA17_Chr6g0453651 | 80.597 | 134 | 22 | 2 | 35 | 164 | 14 | 147 | 4.67e-65 | 213 |
| Msa0983130 | MtrunA17_CPg0492181 | 45.890 | 292 | 141 | 5 | 336 | 618 | 191 | 474 | 8.31e-59 | 211 |
| Msa0983130 | MtrunA17_MTg0490291 | 84.545 | 110 | 0 | 1 | 55 | 164 | 1 | 93 | 1.47e-56 | 188 |
| Msa0983130 | MtrunA17_Chr6g0466221 | 42.123 | 292 | 132 | 7 | 336 | 618 | 191 | 454 | 2.92e-47 | 178 |
| Msa0983130 | MtrunA17_Chr4g0000831 | 48.588 | 177 | 86 | 2 | 336 | 511 | 76 | 248 | 1.12e-40 | 150 |
| Msa0983130 | MtrunA17_Chr7g0221941 | 46.203 | 158 | 80 | 2 | 336 | 492 | 191 | 344 | 2.69e-31 | 125 |
| Msa0983130 | MtrunA17_Chr4g0016301 | 50.000 | 122 | 56 | 2 | 336 | 456 | 191 | 308 | 9.03e-26 | 108 |
| Msa0983130 | MtrunA17_Chr6g0455631 | 43.284 | 134 | 64 | 3 | 493 | 618 | 2 | 131 | 1.82e-19 | 86.3 |
| Msa0983130 | MtrunA17_Chr4g0016311 | 43.284 | 134 | 64 | 3 | 493 | 618 | 2 | 131 | 4.59e-17 | 84.0 |
| Msa0983130 | MtrunA17_MTg0490311 | 96.970 | 33 | 1 | 0 | 186 | 218 | 50 | 82 | 4.84e-16 | 73.6 |
| Msa0983130 | MtrunA17_Chr7g0221951 | 40.650 | 123 | 61 | 3 | 504 | 618 | 1 | 119 | 1.22e-14 | 71.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0983130 | ATMG00513.1 | 73.362 | 473 | 86 | 3 | 186 | 658 | 50 | 482 | 0.0 | 642 |
| Msa0983130 | ATCG01010.1 | 45.017 | 291 | 145 | 4 | 336 | 618 | 171 | 454 | 3.47e-56 | 204 |
Find 201 sgRNAs with CRISPR-Local
Find 404 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCATCTTGCATACAATTTA+TGG | 0.101583 | 6_4:-26271684 | None:intergenic |
| GCAAGAAATCCAAGAATTTC+TGG | 0.159792 | 6_4:-26273865 | None:intergenic |
| GCCCCGACGGTGGGGCCTTA+TGG | 0.177126 | 6_4:+26272884 | Msa0983130:CDS |
| GTCAATCGAGTAGGTGATTT+TGG | 0.183934 | 6_4:+26273762 | Msa0983130:CDS |
| GGCCATTCCTTTAATACTTC+TGG | 0.188724 | 6_4:+26274643 | Msa0983130:CDS |
| GGATTAGCTCCTGGGATTTC+GGG | 0.212418 | 6_4:+26273783 | Msa0983130:CDS |
| CGGAAATGTTTGATGCTTCT+TGG | 0.220892 | 6_4:+26272557 | Msa0983130:CDS |
| GATGCTTCTTGGGGCTTCTT+TGG | 0.222486 | 6_4:+26272568 | Msa0983130:CDS |
| TGGATTAGCTCCTGGGATTT+CGG | 0.244029 | 6_4:+26273782 | Msa0983130:CDS |
| ATGGGCAGCTTATCTCTAAT+TGG | 0.255413 | 6_4:+26274404 | Msa0983130:CDS |
| AGCATCATGGCATAGGTAAA+AGG | 0.267199 | 6_4:-26274380 | None:intergenic |
| CCGAGAGCCAGAAGTATTAA+AGG | 0.272202 | 6_4:-26274650 | None:intergenic |
| AGCCGCCAGGTTTAATGATT+TGG | 0.274558 | 6_4:+26271859 | Msa0983130:CDS |
| GGAAATGTTTGATGCTTCTT+GGG | 0.276000 | 6_4:+26272558 | Msa0983130:CDS |
| AGCCACCAGGTTTGAGAATA+AGG | 0.278963 | 6_4:+26271730 | Msa0983130:CDS |
| GTGTGCTGTCCCTATTGGGC+TGG | 0.302407 | 6_4:-26272915 | None:intergenic |
| TGAGAATAAGGTGGGATTCC+TGG | 0.307570 | 6_4:+26271742 | Msa0983130:CDS |
| CTTGACAGGTACGGATATAT+TGG | 0.312712 | 6_4:-26271358 | None:intergenic |
| CTTAGGGGAAGAAATGTTAT+TGG | 0.325594 | 6_4:+26271640 | Msa0983130:CDS |
| GGGGAAGGGCCCAGCCCAAT+AGG | 0.330355 | 6_4:+26272905 | Msa0983130:CDS |
| GGATGAAACGGAACAAGATT+TGG | 0.331950 | 6_4:+26271945 | Msa0983130:CDS |
| GAATAGTAATGCTTTGAAAA+AGG | 0.334602 | 6_4:-26274279 | None:intergenic |
| GAAAGCAAAATTCCCACTTA+TGG | 0.345728 | 6_4:-26274492 | None:intergenic |
| GTAGGTGGGTATTCAAATAA+AGG | 0.346811 | 6_4:-26274074 | None:intergenic |
| TTCTTTATGCAAGGTAATAT+AGG | 0.356371 | 6_4:-26271316 | None:intergenic |
| CTAGTACCAACTAATTCATT+CGG | 0.356719 | 6_4:+26274581 | Msa0983130:CDS |
| CACAGATAGGATCGCATACT+TGG | 0.362870 | 6_4:+26273955 | Msa0983130:CDS |
| TCATCTTGCATACAATTTAT+GGG | 0.364289 | 6_4:-26271683 | None:intergenic |
| TTACTTCTTATTGGTGCTGT+TGG | 0.367549 | 6_4:+26273924 | Msa0983130:CDS |
| GAGCTCTAATATCACATCTT+TGG | 0.369073 | 6_4:-26274453 | None:intergenic |
| TTTGATTCATGCAGCTACTA+TGG | 0.370736 | 6_4:+26274016 | Msa0983130:CDS |
| GTGTGGGAGCGATCCTGGTC+AGG | 0.374317 | 6_4:+26272814 | Msa0983130:CDS |
| TATTCAACTTGCAGTCAATT+AGG | 0.380213 | 6_4:+26274191 | Msa0983130:CDS |
| TTCCACGAAGATTCAGAGCT+TGG | 0.382290 | 6_4:+26271924 | Msa0983130:CDS |
| TTGCGGCATCTCTAACTATT+CGG | 0.383341 | 6_4:+26274229 | Msa0983130:CDS |
| GGGCTGGGCCCTTCCCCATA+AGG | 0.396602 | 6_4:-26272899 | None:intergenic |
| TGTGCTGTCCCTATTGGGCT+GGG | 0.405280 | 6_4:-26272914 | None:intergenic |
| CCTTTAATACTTCTGGCTCT+CGG | 0.407295 | 6_4:+26274650 | Msa0983130:CDS |
| TACTTCTTATTGGTGCTGTT+GGG | 0.407413 | 6_4:+26273925 | Msa0983130:CDS |
| TTTCATTAGGGAAGGGAAGA+AGG | 0.409753 | 6_4:+26273154 | Msa0983130:intron |
| CTAAGACGGCGCCTCGCATA+TGG | 0.410251 | 6_4:+26272842 | Msa0983130:CDS |
| TACAGGTGTGGGAGCGATCC+TGG | 0.412643 | 6_4:+26272809 | Msa0983130:intron |
| AACCTGGTGGCTCGGTTGAT+TGG | 0.418471 | 6_4:-26271719 | None:intergenic |
| TTGATTGTTATTACTTCTGC+AGG | 0.421572 | 6_4:+26274101 | Msa0983130:CDS |
| TAGTACCAACTAATTCATTC+GGG | 0.422050 | 6_4:+26274582 | Msa0983130:CDS |
| CAAGAAATCCAAGAATTTCT+GGG | 0.425238 | 6_4:-26273864 | None:intergenic |
| CTTTAATACTTCTGGCTCTC+GGG | 0.425994 | 6_4:+26274651 | Msa0983130:CDS |
| CTCTTACTCTTCCACTTGAC+AGG | 0.439034 | 6_4:-26271372 | None:intergenic |
| GCGTAAAACTTCAGATTGTA+AGG | 0.442360 | 6_4:-26271618 | None:intergenic |
| TCCAGGCCTGTTCGGACATA+CGG | 0.442563 | 6_4:+26273298 | Msa0983130:intron |
| TCCCCATAAGGCCCCACCGT+CGG | 0.446311 | 6_4:-26272887 | None:intergenic |
| ATCCAAGCTCTGAATCTTCG+TGG | 0.447288 | 6_4:-26271926 | None:intergenic |
| TACACTAAGTATACCATAAG+TGG | 0.448654 | 6_4:+26274479 | Msa0983130:CDS |
| GCATGAATCAAAGCGGATAC+AGG | 0.452553 | 6_4:-26274005 | None:intergenic |
| GGGAAGGGCCCAGCCCAATA+GGG | 0.453445 | 6_4:+26272906 | Msa0983130:CDS |
| TCATTCCTTGCGGCAACCAC+TGG | 0.453531 | 6_4:+26274134 | Msa0983130:CDS |
| TGAGCAAGATATGCGGAAGA+TGG | 0.453711 | 6_4:+26274337 | Msa0983130:CDS |
| TAGGTGGGTATTCAAATAAA+GGG | 0.454491 | 6_4:-26274073 | None:intergenic |
| ACTATTCCTGAGTGCAGGTT+CGG | 0.458339 | 6_4:+26274295 | Msa0983130:CDS |
| GAGCAAGATATGCGGAAGAT+GGG | 0.459050 | 6_4:+26274338 | Msa0983130:CDS |
| GATTCAGAGCTTGGATGAAA+CGG | 0.459773 | 6_4:+26271933 | Msa0983130:CDS |
| GCTCTCGGGAGTCTCTTTGT+AGG | 0.460069 | 6_4:+26274665 | Msa0983130:CDS |
| TCCTTTGCCACTCAAGTGTA+CGG | 0.460973 | 6_4:-26273196 | None:intergenic |
| TAAAATACAAATCAGAGTTA+TGG | 0.465164 | 6_4:-26273904 | None:intergenic |
| CATCAGCTCGCGTGGTTCAC+CGG | 0.466069 | 6_4:-26272998 | None:intergenic |
| TACCTATGCCATGATGCTCA+TGG | 0.466195 | 6_4:+26274385 | Msa0983130:CDS |
| AAGAGTCTAGTCGGTGGAAC+CGG | 0.467789 | 6_4:+26272979 | Msa0983130:CDS |
| TCATGATGCGCCCATTCCTA+TGG | 0.469530 | 6_4:+26274622 | Msa0983130:CDS |
| ACGGTGGGGCCTTATGGGGA+AGG | 0.473037 | 6_4:+26272890 | Msa0983130:CDS |
| CGCCAGGTTTAATGATTTGG+TGG | 0.475433 | 6_4:+26271862 | Msa0983130:CDS |
| CGGGAACCGTATGTCCGAAC+AGG | 0.476992 | 6_4:-26273304 | None:intergenic |
| AAGAGTAATAAGAAGTGAAA+AGG | 0.480134 | 6_4:-26274535 | None:intergenic |
| GAATAAAATCCAGTTAGAAA+AGG | 0.480541 | 6_4:-26274431 | None:intergenic |
| GGAGAGCGCAGAGTCTAATC+TGG | 0.483734 | 6_4:+26271407 | Msa0983130:CDS |
| GGGAAGAAGGGGCCTAAGCA+CGG | 0.486157 | 6_4:+26273167 | Msa0983130:CDS |
| TACAGAGGTGCGCTTGAAGT+GGG | 0.487988 | 6_4:-26272940 | None:intergenic |
| AAAGGAATGGCCATAGGAAT+GGG | 0.492675 | 6_4:-26274632 | None:intergenic |
| CGTCTTAGCCTTCCCTGACC+AGG | 0.493613 | 6_4:-26272827 | None:intergenic |
| TCAAAGAGCGAGCAGCCGCC+AGG | 0.494903 | 6_4:+26271846 | Msa0983130:CDS |
| GAGTAAGAGTGGCAGAGTCT+TGG | 0.495598 | 6_4:+26271386 | Msa0983130:CDS |
| TACTTGGTCACCCGATGCTA+TGG | 0.496129 | 6_4:+26273971 | Msa0983130:CDS |
| CGGTTGATTGGCACTCCTGT+AGG | 0.497186 | 6_4:-26271707 | None:intergenic |
| TAAAGGAATGGCCATAGGAA+TGG | 0.497603 | 6_4:-26274633 | None:intergenic |
| TTCATTAGGGAAGGGAAGAA+GGG | 0.503686 | 6_4:+26273155 | Msa0983130:intron |
| AGGGGAAGAAATGTTATTGG+TGG | 0.505614 | 6_4:+26271643 | Msa0983130:CDS |
| GAGCTGATGCGTGGGGCAGA+GGG | 0.506086 | 6_4:+26273012 | Msa0983130:CDS |
| GTTGGGAAATCTGCACAGAT+AGG | 0.509072 | 6_4:+26273942 | Msa0983130:CDS |
| GAGTCTCTTTGTAGGATACT+TGG | 0.512447 | 6_4:+26274673 | Msa0983130:CDS |
| TGGGCTAACGGGTCACACTT+TGG | 0.512616 | 6_4:-26274696 | None:intergenic |
| ATTCACCGGCCACTAGATCC+AGG | 0.513797 | 6_4:-26271760 | None:intergenic |
| GCATCATGGCATAGGTAAAA+GGG | 0.515165 | 6_4:-26274379 | None:intergenic |
| AAATCACCTACTCGATTGAC+AGG | 0.515659 | 6_4:-26273759 | None:intergenic |
| GAAATGTTATTGGTGGATGC+AGG | 0.516312 | 6_4:+26271650 | Msa0983130:CDS |
| TATTCTCAAACCTGGTGGCT+CGG | 0.516363 | 6_4:-26271727 | None:intergenic |
| CATCTTGCATACAATTTATG+GGG | 0.518268 | 6_4:-26271682 | None:intergenic |
| GGGCGCTTATGCCCCGACGG+TGG | 0.518436 | 6_4:+26272874 | Msa0983130:CDS |
| TTATTGGTGGATGCAGGACC+TGG | 0.521221 | 6_4:+26271656 | Msa0983130:CDS |
| ACCTATGCCATGATGCTCAT+GGG | 0.522849 | 6_4:+26274386 | Msa0983130:CDS |
| GCATTACTATTCCTGAGTGC+AGG | 0.523036 | 6_4:+26274290 | Msa0983130:CDS |
| TTTATTCTTATGTAGTGGAA+AGG | 0.534001 | 6_4:+26271595 | Msa0983130:intron |
| TTTATTTGAATACCCACCTA+CGG | 0.538217 | 6_4:+26274076 | Msa0983130:CDS |
| CTCGCATATGGGTAGCAAGA+GGG | 0.542278 | 6_4:+26272854 | Msa0983130:CDS |
| TATTACAGAACGATCTAAAG+AGG | 0.543192 | 6_4:+26274159 | Msa0983130:CDS |
| CGAGCTGCTTTCTTTATGCA+AGG | 0.545760 | 6_4:-26271325 | None:intergenic |
| TAAGACGGCGCCTCGCATAT+GGG | 0.548343 | 6_4:+26272843 | Msa0983130:CDS |
| AGCAAGATATGCGGAAGATG+GGG | 0.549351 | 6_4:+26274339 | Msa0983130:CDS |
| GAACCACGCGAGCTGATGCG+TGG | 0.550499 | 6_4:+26273003 | Msa0983130:CDS |
| GAAATGTTTGATGCTTCTTG+GGG | 0.551432 | 6_4:+26272559 | Msa0983130:CDS |
| AACATTTCCGATGAGATCCA+TGG | 0.552901 | 6_4:-26272544 | None:intergenic |
| GCCGTACACTTGAGTGGCAA+AGG | 0.555160 | 6_4:+26273195 | Msa0983130:CDS |
| CTCTTTGATCAGTGATTCGC+CGG | 0.555939 | 6_4:-26271831 | None:intergenic |
| GCAAGATATGCGGAAGATGG+GGG | 0.556104 | 6_4:+26274340 | Msa0983130:CDS |
| CAGTGCTCTCCGAACCGTGC+GGG | 0.557517 | 6_4:-26273366 | None:intergenic |
| GTAAAACGACCCGAAATCCC+AGG | 0.557686 | 6_4:-26273792 | None:intergenic |
| GGCTATATGATCTTTGCTTG+CGG | 0.559310 | 6_4:+26274212 | Msa0983130:CDS |
| CAAGATATGCGGAAGATGGG+GGG | 0.561394 | 6_4:+26274341 | Msa0983130:CDS |
| CAGAGGTGCGCTTGAAGTGG+GGG | 0.562603 | 6_4:-26272938 | None:intergenic |
| AGCCAGAAGTATTAAAGGAA+TGG | 0.568863 | 6_4:-26274645 | None:intergenic |
| TTGGTCACCCGATGCTATGG+AGG | 0.569152 | 6_4:+26273974 | Msa0983130:CDS |
| GCCAGGTTTAATGATTTGGT+GGG | 0.569802 | 6_4:+26271863 | Msa0983130:CDS |
| TGCCAATCAACCGAGCCACC+AGG | 0.570563 | 6_4:+26271717 | Msa0983130:CDS |
| ATACAGAGGTGCGCTTGAAG+TGG | 0.572587 | 6_4:-26272941 | None:intergenic |
| GTAATAACAATCAAAGCCGT+AGG | 0.574499 | 6_4:-26274092 | None:intergenic |
| GGATTCCTGGATCTAGTGGC+CGG | 0.574765 | 6_4:+26271755 | Msa0983130:CDS |
| AGTGGGACCCTCCATAGCAT+CGG | 0.574777 | 6_4:-26273982 | None:intergenic |
| AGTATTAAAGGAATGGCCAT+AGG | 0.575484 | 6_4:-26274638 | None:intergenic |
| ACCAGGTTTGAGAATAAGGT+GGG | 0.575722 | 6_4:+26271734 | Msa0983130:CDS |
| ATAACAATCAAAGCCGTAGG+TGG | 0.576496 | 6_4:-26274089 | None:intergenic |
| ACTCTTCCACTTGACAGGTA+CGG | 0.576579 | 6_4:-26271367 | None:intergenic |
| CTGGTCAGGGAAGGCTAAGA+CGG | 0.577625 | 6_4:+26272828 | Msa0983130:CDS |
| TCCCACCTTATTCTCAAACC+TGG | 0.579561 | 6_4:-26271735 | None:intergenic |
| TCACCAACTTGATCTTCCGC+GGG | 0.579927 | 6_4:-26273323 | None:intergenic |
| GCCCATGAGCATCATGGCAT+AGG | 0.580893 | 6_4:-26274387 | None:intergenic |
| CAAGTTGGTGAGCCGTGTGA+TGG | 0.581423 | 6_4:+26273335 | Msa0983130:CDS |
| AGATAGCAAGCACTAGCTCC+CGG | 0.581838 | 6_4:-26272511 | None:intergenic |
| GCTCTCCGAACCGTGCGGGA+AGG | 0.583304 | 6_4:-26273362 | None:intergenic |
| GCAGCTACTATGGTCACAGC+TGG | 0.583756 | 6_4:+26274026 | Msa0983130:CDS |
| GGTGGGATTCCTGGATCTAG+TGG | 0.584584 | 6_4:+26271751 | Msa0983130:CDS |
| GATCTTATTCATCGATCTAG+TGG | 0.585539 | 6_4:+26271808 | Msa0983130:CDS |
| CATATCTTGCTCATCCGACA+TGG | 0.587018 | 6_4:-26274327 | None:intergenic |
| TTCGGTGATTCATGCCATGT+CGG | 0.587035 | 6_4:+26274313 | Msa0983130:CDS |
| TCTCGCCCGAATGAATTAGT+TGG | 0.587228 | 6_4:-26274587 | None:intergenic |
| ACAGAGGTGCGCTTGAAGTG+GGG | 0.588382 | 6_4:-26272939 | None:intergenic |
| CGGGAAGGTTTCCCATCACA+CGG | 0.588494 | 6_4:-26273347 | None:intergenic |
| ATATATCCGTACCTGTCAAG+TGG | 0.588697 | 6_4:+26271361 | Msa0983130:CDS |
| ATCGTTCTGTAATATTCCAG+TGG | 0.588726 | 6_4:-26274150 | None:intergenic |
| GTCAAGTGGAAGAGTAAGAG+TGG | 0.591396 | 6_4:+26271375 | Msa0983130:CDS |
| TGGTCACCCGATGCTATGGA+GGG | 0.596245 | 6_4:+26273975 | Msa0983130:CDS |
| TCCCACCAAATCATTAAACC+TGG | 0.597401 | 6_4:-26271864 | None:intergenic |
| CTCACCAACTTGATCTTCCG+CGG | 0.600282 | 6_4:-26273324 | None:intergenic |
| TAAGCTGCCCATGAGCATCA+TGG | 0.600544 | 6_4:-26274393 | None:intergenic |
| CGGTGGGGCCTTATGGGGAA+GGG | 0.600962 | 6_4:+26272891 | Msa0983130:CDS |
| GCGGATGCCGTACACTTGAG+TGG | 0.601033 | 6_4:+26273189 | Msa0983130:CDS |
| TCATTAGGGAAGGGAAGAAG+GGG | 0.604529 | 6_4:+26273156 | Msa0983130:intron |
| AAGTTGGTGAGCCGTGTGAT+GGG | 0.605562 | 6_4:+26273336 | Msa0983130:CDS |
| ACACTTGAGTGGCAAAGGAA+AGG | 0.605739 | 6_4:+26273200 | Msa0983130:CDS |
| TGTGGGAGCGATCCTGGTCA+GGG | 0.609896 | 6_4:+26272815 | Msa0983130:CDS |
| GCTATCTAAGAATTGCTCCA+TGG | 0.611195 | 6_4:+26272527 | Msa0983130:CDS |
| GGATCCACAGATGTAGTGGC+TGG | 0.611320 | 6_4:+26271884 | Msa0983130:CDS |
| AATTGCTCCATGGATCTCAT+CGG | 0.611594 | 6_4:+26272537 | Msa0983130:CDS |
| TTCACCAGCCACTACATCTG+TGG | 0.613063 | 6_4:-26271888 | None:intergenic |
| CCTCTTGCTACCCATATGCG+AGG | 0.613383 | 6_4:-26272853 | None:intergenic |
| TTATTCATCGATCTAGTGGC+CGG | 0.614414 | 6_4:+26271812 | Msa0983130:CDS |
| ACACTAAGTATACCATAAGT+GGG | 0.616524 | 6_4:+26274480 | Msa0983130:CDS |
| GAATCACCGAACCTGCACTC+AGG | 0.620171 | 6_4:-26274301 | None:intergenic |
| AATCAAAGCGGATACAGGAG+TGG | 0.621591 | 6_4:-26274000 | None:intergenic |
| AAGAAATCCAAGAATTTCTG+GGG | 0.622862 | 6_4:-26273863 | None:intergenic |
| CACCAGGTTTGAGAATAAGG+TGG | 0.623782 | 6_4:+26271733 | Msa0983130:CDS |
| TGTATGCAAGATGAGCCTAC+AGG | 0.624120 | 6_4:+26271692 | Msa0983130:CDS |
| AAGATATGCGGAAGATGGGG+GGG | 0.624165 | 6_4:+26274342 | Msa0983130:CDS |
| GCTATGCCTGTCAATCGAGT+AGG | 0.633415 | 6_4:+26273753 | Msa0983130:CDS |
| ATATTCCAGTGGTTGCCGCA+AGG | 0.634562 | 6_4:-26274139 | None:intergenic |
| TAACAATCAAAGCCGTAGGT+GGG | 0.634629 | 6_4:-26274088 | None:intergenic |
| ATCAAAGCGGATACAGGAGT+GGG | 0.641166 | 6_4:-26273999 | None:intergenic |
| GGTGGGATCCACAGATGTAG+TGG | 0.641988 | 6_4:+26271880 | Msa0983130:CDS |
| CACCTTATTCTCAAACCTGG+TGG | 0.643760 | 6_4:-26271732 | None:intergenic |
| CCTCGCATATGGGTAGCAAG+AGG | 0.647852 | 6_4:+26272853 | Msa0983130:CDS |
| ATCTTGCATACAATTTATGG+GGG | 0.648826 | 6_4:-26271681 | None:intergenic |
| AATAACTCTAAGAGTCTAGT+CGG | 0.650184 | 6_4:+26272970 | Msa0983130:CDS |
| CTTCGTGGAAGAAGAAGAAG+CGG | 0.652350 | 6_4:-26271911 | None:intergenic |
| ATTACAGAACGATCTAAAGA+GGG | 0.652439 | 6_4:+26274160 | Msa0983130:CDS |
| AACTCTAAGAGTCTAGTCGG+TGG | 0.654834 | 6_4:+26272973 | Msa0983130:CDS |
| CTTGCATAAAGAAAGCAGCT+CGG | 0.655785 | 6_4:+26271326 | Msa0983130:CDS |
| AGAGGTGCGCTTGAAGTGGG+GGG | 0.655807 | 6_4:-26272937 | None:intergenic |
| GTTCCCGCGGAAGATCAAGT+TGG | 0.656221 | 6_4:+26273320 | Msa0983130:CDS |
| AGGTGGGTATTCAAATAAAG+GGG | 0.658761 | 6_4:-26274072 | None:intergenic |
| AGAGGGCGCTTATGCCCCGA+CGG | 0.659080 | 6_4:+26272871 | Msa0983130:CDS |
| AGCTACGACGTCATTCCTTG+CGG | 0.660081 | 6_4:+26274124 | Msa0983130:CDS |
| GAGTTATTCAGTCGATACAG+AGG | 0.660842 | 6_4:-26272955 | None:intergenic |
| GTTCGGACATACGGTTCCCG+CGG | 0.673652 | 6_4:+26273307 | Msa0983130:CDS |
| CACCAAATCATTAAACCTGG+CGG | 0.673743 | 6_4:-26271861 | None:intergenic |
| TGATGGGAAACCTTCCCGCA+CGG | 0.679696 | 6_4:+26273352 | Msa0983130:CDS |
| GGCATAGGTAAAAGGGAACG+AGG | 0.679913 | 6_4:-26274372 | None:intergenic |
| TATTGGTGGATGCAGGACCT+GGG | 0.682412 | 6_4:+26271657 | Msa0983130:CDS |
| AAGAAGGGGCCTAAGCACGG+CGG | 0.685289 | 6_4:+26273170 | Msa0983130:CDS |
| TGTCGGATGAGCAAGATATG+CGG | 0.703547 | 6_4:+26274330 | Msa0983130:CDS |
| AGAAATCCAAGAATTTCTGG+GGG | 0.708462 | 6_4:-26273862 | None:intergenic |
| AGTAGCTGCATGAATCAAAG+CGG | 0.716944 | 6_4:-26274012 | None:intergenic |
| AAAATCAGACAATGACAGAG+CGG | 0.750573 | 6_4:-26272310 | None:intergenic |
| ATAGGTAAAAGGGAACGAGG+AGG | 0.767719 | 6_4:-26274369 | None:intergenic |
| GATTTGGCGAACGAATACAA+AGG | 0.783479 | 6_4:+26271961 | Msa0983130:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAAATTGAATTACATCT+TGG | - | chr6_4:26271581-26271600 | None:intergenic | 15.0% |
| !! | TTTATTATTGATAAAGTCAA+AGG | + | chr6_4:26272001-26272020 | Msa0983130:intron | 15.0% |
| !!! | ATTTGTATTTTACTTCTTAT+TGG | + | chr6_4:26273915-26273934 | Msa0983130:CDS | 15.0% |
| !!! | TCAATTTTATTCTTATGTAG+TGG | + | chr6_4:26271590-26271609 | Msa0983130:intron | 20.0% |
| !! | TATATGAAATGGAATAAAGA+TGG | - | chr6_4:26273545-26273564 | None:intergenic | 20.0% |
| !! | ATAAATAACACATAAATCGA+GGG | - | chr6_4:26273587-26273606 | None:intergenic | 20.0% |
| !!! | CATATTTGTTAATTCATTTC+TGG | + | chr6_4:26273694-26273713 | Msa0983130:intron | 20.0% |
| !! | TAAAATACAAATCAGAGTTA+TGG | - | chr6_4:26273907-26273926 | None:intergenic | 20.0% |
| ! | TTCTTTATGCAAGGTAATAT+AGG | - | chr6_4:26271319-26271338 | None:intergenic | 25.0% |
| ! | GGTAAATATCTCCTATAATA+AGG | + | chr6_4:26271428-26271447 | Msa0983130:intron | 25.0% |
| ! | AAATATCTCCTATAATAAGG+CGG | + | chr6_4:26271431-26271450 | Msa0983130:intron | 25.0% |
| ! | TGTTCTATTGATCAAAAGAA+AGG | - | chr6_4:26271504-26271523 | None:intergenic | 25.0% |
| !! | TTTCTTTTGATCAATAGAAC+AGG | + | chr6_4:26271503-26271522 | Msa0983130:intron | 25.0% |
| !! | TTTATTCTTATGTAGTGGAA+AGG | + | chr6_4:26271595-26271614 | Msa0983130:intron | 25.0% |
| ! | TCATCTTGCATACAATTTAT+GGG | - | chr6_4:26271686-26271705 | None:intergenic | 25.0% |
| !! | ACTGATCAAAAAGAAGATTT+TGG | + | chr6_4:26271784-26271803 | Msa0983130:CDS | 25.0% |
| ! | ACAAAGGTAAGGTAAAAAAA+AGG | + | chr6_4:26271977-26271996 | Msa0983130:intron | 25.0% |
| ! | ATTATTGATAAAGTCAAAGG+AGG | + | chr6_4:26272004-26272023 | Msa0983130:intron | 25.0% |
| !! | TTAATCCATTCTTTTGTTGA+GGG | + | chr6_4:26272269-26272288 | Msa0983130:intron | 25.0% |
| ! | GAATCACCTACTAAAAAAAT+AGG | + | chr6_4:26273084-26273103 | Msa0983130:intron | 25.0% |
| ! | GATAAATAACACATAAATCG+AGG | - | chr6_4:26273588-26273607 | None:intergenic | 25.0% |
| ! | TGGCATAAAAAAAGTAAGAA+TGG | - | chr6_4:26273610-26273629 | None:intergenic | 25.0% |
| !!! | TACTTTTTTTATGCCAATGT+TGG | + | chr6_4:26273614-26273633 | Msa0983130:intron | 25.0% |
| !!! | GAATAGTAATGCTTTGAAAA+AGG | - | chr6_4:26274282-26274301 | None:intergenic | 25.0% |
| ! | GAATAAAATCCAGTTAGAAA+AGG | - | chr6_4:26274434-26274453 | None:intergenic | 25.0% |
| ! | AAGAGTAATAAGAAGTGAAA+AGG | - | chr6_4:26274538-26274557 | None:intergenic | 25.0% |
| !! | AATCTGAAGTTTTACGCTTA+GGG | + | chr6_4:26271624-26271643 | Msa0983130:CDS | 30.0% |
| ATCTTGCATACAATTTATGG+GGG | - | chr6_4:26271684-26271703 | None:intergenic | 30.0% | |
| CATCTTGCATACAATTTATG+GGG | - | chr6_4:26271685-26271704 | None:intergenic | 30.0% | |
| CTCATCTTGCATACAATTTA+TGG | - | chr6_4:26271687-26271706 | None:intergenic | 30.0% | |
| !! | TATTCCTTTTGTTGTGAGAA+CGG | - | chr6_4:26272072-26272091 | None:intergenic | 30.0% |
| CTCACAACAAAAGGAATAAA+AGG | + | chr6_4:26272074-26272093 | Msa0983130:intron | 30.0% | |
| ACAACAAAAGGAATAAAAGG+AGG | + | chr6_4:26272077-26272096 | Msa0983130:intron | 30.0% | |
| !! | CTCAACAAAAGAATGGATTA+AGG | - | chr6_4:26272270-26272289 | None:intergenic | 30.0% |
| ! | CTTAATCCATTCTTTTGTTG+AGG | + | chr6_4:26272268-26272287 | Msa0983130:intron | 30.0% |
| ! | AATAACTCTAAGAGTCTAGT+CGG | + | chr6_4:26272970-26272989 | Msa0983130:CDS | 30.0% |
| AACCACAATTAACATCACTA+CGG | - | chr6_4:26273502-26273521 | None:intergenic | 30.0% | |
| TTCCATTTCATATATGTCTG+AGG | + | chr6_4:26273551-26273570 | Msa0983130:intron | 30.0% | |
| ATCCTCAGACATATATGAAA+TGG | - | chr6_4:26273556-26273575 | None:intergenic | 30.0% | |
| TAACTCTCTTCAATTATTCC+TGG | + | chr6_4:26273647-26273666 | Msa0983130:intron | 30.0% | |
| AACTCTCTTCAATTATTCCT+GGG | + | chr6_4:26273648-26273667 | Msa0983130:intron | 30.0% | |
| AAGAAATCCAAGAATTTCTG+GGG | - | chr6_4:26273866-26273885 | None:intergenic | 30.0% | |
| CAAGAAATCCAAGAATTTCT+GGG | - | chr6_4:26273867-26273886 | None:intergenic | 30.0% | |
| TAGGTGGGTATTCAAATAAA+GGG | - | chr6_4:26274076-26274095 | None:intergenic | 30.0% | |
| TTTATTTGAATACCCACCTA+CGG | + | chr6_4:26274076-26274095 | Msa0983130:CDS | 30.0% | |
| ! | TTGATTGTTATTACTTCTGC+AGG | + | chr6_4:26274101-26274120 | Msa0983130:CDS | 30.0% |
| TATTACAGAACGATCTAAAG+AGG | + | chr6_4:26274159-26274178 | Msa0983130:CDS | 30.0% | |
| ATTACAGAACGATCTAAAGA+GGG | + | chr6_4:26274160-26274179 | Msa0983130:CDS | 30.0% | |
| TATTCAACTTGCAGTCAATT+AGG | + | chr6_4:26274191-26274210 | Msa0983130:CDS | 30.0% | |
| ! | ATTGGATTTCCTTTTCTAAC+TGG | + | chr6_4:26274422-26274441 | Msa0983130:CDS | 30.0% |
| TACACTAAGTATACCATAAG+TGG | + | chr6_4:26274479-26274498 | Msa0983130:CDS | 30.0% | |
| ACACTAAGTATACCATAAGT+GGG | + | chr6_4:26274480-26274499 | Msa0983130:CDS | 30.0% | |
| CTAGTACCAACTAATTCATT+CGG | + | chr6_4:26274581-26274600 | Msa0983130:CDS | 30.0% | |
| TAGTACCAACTAATTCATTC+GGG | + | chr6_4:26274582-26274601 | Msa0983130:CDS | 30.0% | |
| TTGATCAATAGAACAGGAAG+AGG | + | chr6_4:26271509-26271528 | Msa0983130:intron | 35.0% | |
| GCGTAAAACTTCAGATTGTA+AGG | - | chr6_4:26271621-26271640 | None:intergenic | 35.0% | |
| !! | CAATCTGAAGTTTTACGCTT+AGG | + | chr6_4:26271623-26271642 | Msa0983130:CDS | 35.0% |
| !! | ATCTGAAGTTTTACGCTTAG+GGG | + | chr6_4:26271625-26271644 | Msa0983130:CDS | 35.0% |
| CTTAGGGGAAGAAATGTTAT+TGG | + | chr6_4:26271640-26271659 | Msa0983130:CDS | 35.0% | |
| ! | CTTTTTGATCAGTGATTCAC+CGG | - | chr6_4:26271777-26271796 | None:intergenic | 35.0% |
| GATCTTATTCATCGATCTAG+TGG | + | chr6_4:26271808-26271827 | Msa0983130:CDS | 35.0% | |
| ! | ACCACAATATTCGTCCTTTT+GGG | - | chr6_4:26272139-26272158 | None:intergenic | 35.0% |
| ATATTGTGGTGTTCTAACAG+CGG | + | chr6_4:26272149-26272168 | Msa0983130:intron | 35.0% | |
| ! | TAAGGTGATAGAGTGTTATC+AGG | - | chr6_4:26272252-26272271 | None:intergenic | 35.0% |
| AAAATCAGACAATGACAGAG+CGG | - | chr6_4:26272313-26272332 | None:intergenic | 35.0% | |
| ! | CTCTGTCATTGTCTGATTTT+TGG | + | chr6_4:26272313-26272332 | Msa0983130:CDS | 35.0% |
| GGAAATGTTTGATGCTTCTT+GGG | + | chr6_4:26272558-26272577 | Msa0983130:CDS | 35.0% | |
| GAAATGTTTGATGCTTCTTG+GGG | + | chr6_4:26272559-26272578 | Msa0983130:CDS | 35.0% | |
| AAAAGGCTGGATCAAGAAAA+GGG | - | chr6_4:26273049-26273068 | None:intergenic | 35.0% | |
| CACCTACTAAAAAAATAGGC+AGG | + | chr6_4:26273088-26273107 | Msa0983130:intron | 35.0% | |
| TGCCTTAGTAGTCTCAAATA+GGG | - | chr6_4:26273122-26273141 | None:intergenic | 35.0% | |
| ATGAAGTAACTCGACTGATA+AGG | + | chr6_4:26273224-26273243 | Msa0983130:intron | 35.0% | |
| ACAATTAACATCACTACGGT+CGG | - | chr6_4:26273498-26273517 | None:intergenic | 35.0% | |
| TCTTCAATTATTCCTGGGAT+GGG | + | chr6_4:26273653-26273672 | Msa0983130:intron | 35.0% | |
| ! | AGAAATCCAAGAATTTCTGG+GGG | - | chr6_4:26273865-26273884 | None:intergenic | 35.0% |
| GCAAGAAATCCAAGAATTTC+TGG | - | chr6_4:26273868-26273887 | None:intergenic | 35.0% | |
| !! | TTACTTCTTATTGGTGCTGT+TGG | + | chr6_4:26273924-26273943 | Msa0983130:CDS | 35.0% |
| !! | TACTTCTTATTGGTGCTGTT+GGG | + | chr6_4:26273925-26273944 | Msa0983130:CDS | 35.0% |
| TTTGATTCATGCAGCTACTA+TGG | + | chr6_4:26274016-26274035 | Msa0983130:CDS | 35.0% | |
| AGGTGGGTATTCAAATAAAG+GGG | - | chr6_4:26274075-26274094 | None:intergenic | 35.0% | |
| GTAGGTGGGTATTCAAATAA+AGG | - | chr6_4:26274077-26274096 | None:intergenic | 35.0% | |
| GTAATAACAATCAAAGCCGT+AGG | - | chr6_4:26274095-26274114 | None:intergenic | 35.0% | |
| ATCGTTCTGTAATATTCCAG+TGG | - | chr6_4:26274153-26274172 | None:intergenic | 35.0% | |
| ! | GAGCTCTAATATCACATCTT+TGG | - | chr6_4:26274456-26274475 | None:intergenic | 35.0% |
| GAAAGCAAAATTCCCACTTA+TGG | - | chr6_4:26274495-26274514 | None:intergenic | 35.0% | |
| ! | TAAGTGGGAATTTTGCTTTC+TGG | + | chr6_4:26274495-26274514 | Msa0983130:CDS | 35.0% |
| AGTATTAAAGGAATGGCCAT+AGG | - | chr6_4:26274641-26274660 | None:intergenic | 35.0% | |
| !! | AGCCAGAAGTATTAAAGGAA+TGG | - | chr6_4:26274648-26274667 | None:intergenic | 35.0% |
| CTTGCATAAAGAAAGCAGCT+CGG | + | chr6_4:26271326-26271345 | Msa0983130:CDS | 40.0% | |
| CTTGACAGGTACGGATATAT+TGG | - | chr6_4:26271361-26271380 | None:intergenic | 40.0% | |
| ATATATCCGTACCTGTCAAG+TGG | + | chr6_4:26271361-26271380 | Msa0983130:CDS | 40.0% | |
| TCCTATAATAAGGCGGAGAA+CGG | + | chr6_4:26271438-26271457 | Msa0983130:intron | 40.0% | |
| ATCAATAGAACAGGAAGAGG+AGG | + | chr6_4:26271512-26271531 | Msa0983130:intron | 40.0% | |
| AGGGGAAGAAATGTTATTGG+TGG | + | chr6_4:26271643-26271662 | Msa0983130:CDS | 40.0% | |
| ! | GAAATGTTATTGGTGGATGC+AGG | + | chr6_4:26271650-26271669 | Msa0983130:CDS | 40.0% |
| ACCAGGTTTGAGAATAAGGT+GGG | + | chr6_4:26271734-26271753 | Msa0983130:CDS | 40.0% | |
| TTATTCATCGATCTAGTGGC+CGG | + | chr6_4:26271812-26271831 | Msa0983130:CDS | 40.0% | |
| CACCAAATCATTAAACCTGG+CGG | - | chr6_4:26271864-26271883 | None:intergenic | 40.0% | |
| !! | GCCAGGTTTAATGATTTGGT+GGG | + | chr6_4:26271863-26271882 | Msa0983130:CDS | 40.0% |
| TCCCACCAAATCATTAAACC+TGG | - | chr6_4:26271867-26271886 | None:intergenic | 40.0% | |
| GATTCAGAGCTTGGATGAAA+CGG | + | chr6_4:26271933-26271952 | Msa0983130:CDS | 40.0% | |
| GGATGAAACGGAACAAGATT+TGG | + | chr6_4:26271945-26271964 | Msa0983130:CDS | 40.0% | |
| GATTTGGCGAACGAATACAA+AGG | + | chr6_4:26271961-26271980 | Msa0983130:CDS | 40.0% | |
| AAAAGTAATGAAACCCGCGA+TGG | - | chr6_4:26272041-26272060 | None:intergenic | 40.0% | |
| !! | CTTTTGTTGTGAGAACGGAA+TGG | - | chr6_4:26272067-26272086 | None:intergenic | 40.0% |
| CATTCCGTTCTCACAACAAA+AGG | + | chr6_4:26272065-26272084 | Msa0983130:intron | 40.0% | |
| ! | TTTGGGGTTAATGCTCTCAA+TGG | - | chr6_4:26272122-26272141 | None:intergenic | 40.0% |
| !! | TTGAGAGCATTAACCCCAAA+AGG | + | chr6_4:26272122-26272141 | Msa0983130:intron | 40.0% |
| ! | CCACAATATTCGTCCTTTTG+GGG | - | chr6_4:26272138-26272157 | None:intergenic | 40.0% |
| ! | CACCACAATATTCGTCCTTT+TGG | - | chr6_4:26272140-26272159 | None:intergenic | 40.0% |
| !!! | AGTTCCGTAGCAGGTTTTTT+CGG | + | chr6_4:26272394-26272413 | Msa0983130:intron | 40.0% |
| !!! | GGTTTTTTCGGACGTTTTCT+AGG | + | chr6_4:26272406-26272425 | Msa0983130:intron | 40.0% |
| !! | TGCTTTTTATGAAGTCGCAC+CGG | + | chr6_4:26272492-26272511 | Msa0983130:intron | 40.0% |
| GCTATCTAAGAATTGCTCCA+TGG | + | chr6_4:26272527-26272546 | Msa0983130:CDS | 40.0% | |
| AATTGCTCCATGGATCTCAT+CGG | + | chr6_4:26272537-26272556 | Msa0983130:CDS | 40.0% | |
| AACATTTCCGATGAGATCCA+TGG | - | chr6_4:26272547-26272566 | None:intergenic | 40.0% | |
| CGGAAATGTTTGATGCTTCT+TGG | + | chr6_4:26272557-26272576 | Msa0983130:CDS | 40.0% | |
| TATCTACTCGGCAATTCATC+CGG | - | chr6_4:26272608-26272627 | None:intergenic | 40.0% | |
| ! | TCAACTGTGTATCGATCGAA+AGG | - | chr6_4:26272770-26272789 | None:intergenic | 40.0% |
| GAGTTATTCAGTCGATACAG+AGG | - | chr6_4:26272958-26272977 | None:intergenic | 40.0% | |
| AAAGGCTGGATCAAGAAAAG+GGG | - | chr6_4:26273048-26273067 | None:intergenic | 40.0% | |
| GAAAAGGCTGGATCAAGAAA+AGG | - | chr6_4:26273050-26273069 | None:intergenic | 40.0% | |
| ! | ATCCAGCCTTTTCTTCTCTT+CGG | + | chr6_4:26273057-26273076 | Msa0983130:intron | 40.0% |
| TCACTACCGAAGAGAAGAAA+AGG | - | chr6_4:26273066-26273085 | None:intergenic | 40.0% | |
| !!! | GGCCTGCCTATTTTTTTAGT+AGG | - | chr6_4:26273093-26273112 | None:intergenic | 40.0% |
| CTGCCTTAGTAGTCTCAAAT+AGG | - | chr6_4:26273123-26273142 | None:intergenic | 40.0% | |
| ! | CTATTTGAGACTACTAAGGC+AGG | + | chr6_4:26273121-26273140 | Msa0983130:intron | 40.0% |
| TGGACTCTTTCATTAGGGAA+GGG | + | chr6_4:26273147-26273166 | Msa0983130:intron | 40.0% | |
| TTTCATTAGGGAAGGGAAGA+AGG | + | chr6_4:26273154-26273173 | Msa0983130:intron | 40.0% | |
| TTCATTAGGGAAGGGAAGAA+GGG | + | chr6_4:26273155-26273174 | Msa0983130:intron | 40.0% | |
| !! | GAGCACTGAATTAGAATGAG+AGG | + | chr6_4:26273381-26273400 | Msa0983130:intron | 40.0% |
| GTCAGAAGTGAATTACGAGT+CGG | - | chr6_4:26273460-26273479 | None:intergenic | 40.0% | |
| CAATTAACATCACTACGGTC+GGG | - | chr6_4:26273497-26273516 | None:intergenic | 40.0% | |
| GACCGTAGTGATGTTAATTG+TGG | + | chr6_4:26273497-26273516 | Msa0983130:intron | 40.0% | |
| AAGATGGACCAAGCTACTTA+CGG | - | chr6_4:26273529-26273548 | None:intergenic | 40.0% | |
| !! | TTTATGCCAATGTTGGTGAC+TGG | + | chr6_4:26273621-26273640 | Msa0983130:intron | 40.0% |
| TTATCTCCAGTCACCAACAT+TGG | - | chr6_4:26273630-26273649 | None:intergenic | 40.0% | |
| CTCTTCAATTATTCCTGGGA+TGG | + | chr6_4:26273652-26273671 | Msa0983130:intron | 40.0% | |
| !! | TTTCTGGTTTACACGACTTC+AGG | + | chr6_4:26273710-26273729 | Msa0983130:intron | 40.0% |
| AAATCACCTACTCGATTGAC+AGG | - | chr6_4:26273762-26273781 | None:intergenic | 40.0% | |
| ! | GTCAATCGAGTAGGTGATTT+TGG | + | chr6_4:26273762-26273781 | Msa0983130:CDS | 40.0% |
| !!! | GTGATTTTGGATTAGCTCCT+GGG | + | chr6_4:26273775-26273794 | Msa0983130:CDS | 40.0% |
| AGTAGCTGCATGAATCAAAG+CGG | - | chr6_4:26274015-26274034 | None:intergenic | 40.0% | |
| TAACAATCAAAGCCGTAGGT+GGG | - | chr6_4:26274091-26274110 | None:intergenic | 40.0% | |
| ATAACAATCAAAGCCGTAGG+TGG | - | chr6_4:26274092-26274111 | None:intergenic | 40.0% | |
| GGCTATATGATCTTTGCTTG+CGG | + | chr6_4:26274212-26274231 | Msa0983130:CDS | 40.0% | |
| TTGCGGCATCTCTAACTATT+CGG | + | chr6_4:26274229-26274248 | Msa0983130:CDS | 40.0% | |
| GCATCATGGCATAGGTAAAA+GGG | - | chr6_4:26274382-26274401 | None:intergenic | 40.0% | |
| AGCATCATGGCATAGGTAAA+AGG | - | chr6_4:26274383-26274402 | None:intergenic | 40.0% | |
| ATGGGCAGCTTATCTCTAAT+TGG | + | chr6_4:26274404-26274423 | Msa0983130:CDS | 40.0% | |
| !! | TGGGAATTTTGCTTTCTGGT+TGG | + | chr6_4:26274499-26274518 | Msa0983130:CDS | 40.0% |
| !!! | GGGAATTTTGCTTTCTGGTT+GGG | + | chr6_4:26274500-26274519 | Msa0983130:CDS | 40.0% |
| AAAGGAATGGCCATAGGAAT+GGG | - | chr6_4:26274635-26274654 | None:intergenic | 40.0% | |
| TAAAGGAATGGCCATAGGAA+TGG | - | chr6_4:26274636-26274655 | None:intergenic | 40.0% | |
| GGCCATTCCTTTAATACTTC+TGG | + | chr6_4:26274643-26274662 | Msa0983130:CDS | 40.0% | |
| !! | CCTTTAATACTTCTGGCTCT+CGG | + | chr6_4:26274650-26274669 | Msa0983130:CDS | 40.0% |
| !! | CTTTAATACTTCTGGCTCTC+GGG | + | chr6_4:26274651-26274670 | Msa0983130:CDS | 40.0% |
| GAGTCTCTTTGTAGGATACT+TGG | + | chr6_4:26274673-26274692 | Msa0983130:CDS | 40.0% | |
| ! | CGAGCTGCTTTCTTTATGCA+AGG | - | chr6_4:26271328-26271347 | None:intergenic | 45.0% |
| ACTCTTCCACTTGACAGGTA+CGG | - | chr6_4:26271370-26271389 | None:intergenic | 45.0% | |
| CTCTTACTCTTCCACTTGAC+AGG | - | chr6_4:26271375-26271394 | None:intergenic | 45.0% | |
| GTCAAGTGGAAGAGTAAGAG+TGG | + | chr6_4:26271375-26271394 | Msa0983130:CDS | 45.0% | |
| ! | TCCGTTCTCCGCCTTATTAT+AGG | - | chr6_4:26271442-26271461 | None:intergenic | 45.0% |
| GCGGAGAACGGATAATAACT+CGG | + | chr6_4:26271450-26271469 | Msa0983130:intron | 45.0% | |
| ACTCGGCAAATGTCCGATTT+CGG | + | chr6_4:26271467-26271486 | Msa0983130:intron | 45.0% | |
| GGCACACTTATCTCCGAAAT+CGG | - | chr6_4:26271483-26271502 | None:intergenic | 45.0% | |
| ATACAATTTATGGGGGTCCC+AGG | - | chr6_4:26271677-26271696 | None:intergenic | 45.0% | |
| TGTATGCAAGATGAGCCTAC+AGG | + | chr6_4:26271692-26271711 | Msa0983130:CDS | 45.0% | |
| TATTCTCAAACCTGGTGGCT+CGG | - | chr6_4:26271730-26271749 | None:intergenic | 45.0% | |
| AGCCACCAGGTTTGAGAATA+AGG | + | chr6_4:26271730-26271749 | Msa0983130:CDS | 45.0% | |
| CACCTTATTCTCAAACCTGG+TGG | - | chr6_4:26271735-26271754 | None:intergenic | 45.0% | |
| CACCAGGTTTGAGAATAAGG+TGG | + | chr6_4:26271733-26271752 | Msa0983130:CDS | 45.0% | |
| TCCCACCTTATTCTCAAACC+TGG | - | chr6_4:26271738-26271757 | None:intergenic | 45.0% | |
| TGAGAATAAGGTGGGATTCC+TGG | + | chr6_4:26271742-26271761 | Msa0983130:CDS | 45.0% | |
| CTCTTTGATCAGTGATTCGC+CGG | - | chr6_4:26271834-26271853 | None:intergenic | 45.0% | |
| AGCCGCCAGGTTTAATGATT+TGG | + | chr6_4:26271859-26271878 | Msa0983130:CDS | 45.0% | |
| ! | CGCCAGGTTTAATGATTTGG+TGG | + | chr6_4:26271862-26271881 | Msa0983130:CDS | 45.0% |
| CTTCGTGGAAGAAGAAGAAG+CGG | - | chr6_4:26271914-26271933 | None:intergenic | 45.0% | |
| TTCCACGAAGATTCAGAGCT+TGG | + | chr6_4:26271924-26271943 | Msa0983130:CDS | 45.0% | |
| !! | ATCCAAGCTCTGAATCTTCG+TGG | - | chr6_4:26271929-26271948 | None:intergenic | 45.0% |
| GGCGAACGAATACAAAGGTA+AGG | + | chr6_4:26271966-26271985 | Msa0983130:intron | 45.0% | |
| AGGTTATTCAGTAGCCATCG+CGG | + | chr6_4:26272024-26272043 | Msa0983130:intron | 45.0% | |
| CCCCAAAAGGACGAATATTG+TGG | + | chr6_4:26272135-26272154 | Msa0983130:intron | 45.0% | |
| CCAGACCCTCAACAAAAGAA+TGG | - | chr6_4:26272277-26272296 | None:intergenic | 45.0% | |
| ! | CCATTCTTTTGTTGAGGGTC+TGG | + | chr6_4:26272274-26272293 | Msa0983130:intron | 45.0% |
| !! | ATCGTATTTTTGCCCCTGCT+CGG | + | chr6_4:26272370-26272389 | Msa0983130:intron | 45.0% |
| ACGTCCGAAAAAACCTGCTA+CGG | - | chr6_4:26272401-26272420 | None:intergenic | 45.0% | |
| !!! | GGACGTTTTCTAGGATCAGA+AGG | + | chr6_4:26272415-26272434 | Msa0983130:intron | 45.0% |
| GCACGTAGTGGTCATTATAG+CGG | - | chr6_4:26272443-26272462 | None:intergenic | 45.0% | |
| AGAGAATGAAACGCACGTAG+TGG | - | chr6_4:26272455-26272474 | None:intergenic | 45.0% | |
| ! | GCTTTTTATGAAGTCGCACC+GGG | + | chr6_4:26272493-26272512 | Msa0983130:intron | 45.0% |
| CAATTCATCCGGTGACTTCA+CGG | - | chr6_4:26272597-26272616 | None:intergenic | 45.0% | |
| CCGGATCTGATCTATCTACT+CGG | - | chr6_4:26272620-26272639 | None:intergenic | 45.0% | |
| CCGAGTAGATAGATCAGATC+CGG | + | chr6_4:26272617-26272636 | Msa0983130:intron | 45.0% | |
| ! | TGTGTATCGATCGAAAGGCA+GGG | - | chr6_4:26272765-26272784 | None:intergenic | 45.0% |
| CGATCGATACACAGTTGAGT+AGG | + | chr6_4:26272772-26272791 | Msa0983130:intron | 45.0% | |
| ! | AACTCTAAGAGTCTAGTCGG+TGG | + | chr6_4:26272973-26272992 | Msa0983130:CDS | 45.0% |
| AAGGCTGGATCAAGAAAAGG+GGG | - | chr6_4:26273047-26273066 | None:intergenic | 45.0% | |
| TACCGAAGAGAAGAAAAGGC+TGG | - | chr6_4:26273062-26273081 | None:intergenic | 45.0% | |
| ! | CGCCCTATTTGAGACTACTA+AGG | + | chr6_4:26273117-26273136 | Msa0983130:intron | 45.0% |
| ! | TTTGAGACTACTAAGGCAGG+CGG | + | chr6_4:26273124-26273143 | Msa0983130:intron | 45.0% |
| GTGGACTCTTTCATTAGGGA+AGG | + | chr6_4:26273146-26273165 | Msa0983130:intron | 45.0% | |
| TCATTAGGGAAGGGAAGAAG+GGG | + | chr6_4:26273156-26273175 | Msa0983130:intron | 45.0% | |
| TCCTTTGCCACTCAAGTGTA+CGG | - | chr6_4:26273199-26273218 | None:intergenic | 45.0% | |
| ACACTTGAGTGGCAAAGGAA+AGG | + | chr6_4:26273200-26273219 | Msa0983130:CDS | 45.0% | |
| GTAACTCGACTGATAAGGAG+AGG | + | chr6_4:26273229-26273248 | Msa0983130:intron | 45.0% | |
| TTTGAAGATGCTCGACCGAA+AGG | + | chr6_4:26273252-26273271 | Msa0983130:intron | 45.0% | |
| TTGAAGATGCTCGACCGAAA+GGG | + | chr6_4:26273253-26273272 | Msa0983130:intron | 45.0% | |
| !!! | GAAGAGGTACCTCTTTTTCC+AGG | + | chr6_4:26273281-26273300 | Msa0983130:intron | 45.0% |
| CACCACATCATTGCATGCAA+GGG | + | chr6_4:26273409-26273428 | Msa0983130:intron | 45.0% | |
| ACCACATCATTGCATGCAAG+GGG | + | chr6_4:26273410-26273429 | Msa0983130:intron | 45.0% | |
| GGTTACATCCGTAAGTAGCT+TGG | + | chr6_4:26273518-26273537 | Msa0983130:intron | 45.0% | |
| CACATAAATCGAGGGCTATG+CGG | - | chr6_4:26273579-26273598 | None:intergenic | 45.0% | |
| TCAATTATTCCTGGGATGGG+AGG | + | chr6_4:26273656-26273675 | Msa0983130:intron | 45.0% | |
| CAATTATTCCTGGGATGGGA+GGG | + | chr6_4:26273657-26273676 | Msa0983130:intron | 45.0% | |
| !!! | GGTGATTTTGGATTAGCTCC+TGG | + | chr6_4:26273774-26273793 | Msa0983130:CDS | 45.0% |
| !! | TGGATTAGCTCCTGGGATTT+CGG | + | chr6_4:26273782-26273801 | Msa0983130:CDS | 45.0% |
| GTTGGGAAATCTGCACAGAT+AGG | + | chr6_4:26273942-26273961 | Msa0983130:CDS | 45.0% | |
| CACAGATAGGATCGCATACT+TGG | + | chr6_4:26273955-26273974 | Msa0983130:CDS | 45.0% | |
| ATCAAAGCGGATACAGGAGT+GGG | - | chr6_4:26274002-26274021 | None:intergenic | 45.0% | |
| AATCAAAGCGGATACAGGAG+TGG | - | chr6_4:26274003-26274022 | None:intergenic | 45.0% | |
| GCATGAATCAAAGCGGATAC+AGG | - | chr6_4:26274008-26274027 | None:intergenic | 45.0% | |
| ! | CTGGCGTTTTCATGATAGCA+AGG | + | chr6_4:26274045-26274064 | Msa0983130:CDS | 45.0% |
| GCATTACTATTCCTGAGTGC+AGG | + | chr6_4:26274290-26274309 | Msa0983130:CDS | 45.0% | |
| ACTATTCCTGAGTGCAGGTT+CGG | + | chr6_4:26274295-26274314 | Msa0983130:CDS | 45.0% | |
| TTCGGTGATTCATGCCATGT+CGG | + | chr6_4:26274313-26274332 | Msa0983130:CDS | 45.0% | |
| CATATCTTGCTCATCCGACA+TGG | - | chr6_4:26274330-26274349 | None:intergenic | 45.0% | |
| TGTCGGATGAGCAAGATATG+CGG | + | chr6_4:26274330-26274349 | Msa0983130:CDS | 45.0% | |
| TGAGCAAGATATGCGGAAGA+TGG | + | chr6_4:26274337-26274356 | Msa0983130:CDS | 45.0% | |
| GAGCAAGATATGCGGAAGAT+GGG | + | chr6_4:26274338-26274357 | Msa0983130:CDS | 45.0% | |
| AGCAAGATATGCGGAAGATG+GGG | + | chr6_4:26274339-26274358 | Msa0983130:CDS | 45.0% | |
| ATAGGTAAAAGGGAACGAGG+AGG | - | chr6_4:26274372-26274391 | None:intergenic | 45.0% | |
| TACCTATGCCATGATGCTCA+TGG | + | chr6_4:26274385-26274404 | Msa0983130:CDS | 45.0% | |
| ACCTATGCCATGATGCTCAT+GGG | + | chr6_4:26274386-26274405 | Msa0983130:CDS | 45.0% | |
| TCTCGCCCGAATGAATTAGT+TGG | - | chr6_4:26274590-26274609 | None:intergenic | 45.0% | |
| !! | CCGAGAGCCAGAAGTATTAA+AGG | - | chr6_4:26274653-26274672 | None:intergenic | 45.0% |
| GAGTAAGAGTGGCAGAGTCT+TGG | + | chr6_4:26271386-26271405 | Msa0983130:CDS | 50.0% | |
| ! | TTATTGGTGGATGCAGGACC+TGG | + | chr6_4:26271656-26271675 | Msa0983130:CDS | 50.0% |
| ! | TATTGGTGGATGCAGGACCT+GGG | + | chr6_4:26271657-26271676 | Msa0983130:CDS | 50.0% |
| TTCACCAGCCACTACATCTG+TGG | - | chr6_4:26271891-26271910 | None:intergenic | 50.0% | |
| GGTTATTCAGTAGCCATCGC+GGG | + | chr6_4:26272025-26272044 | Msa0983130:intron | 50.0% | |
| GAGTGTTATCAGGAGACGCT+AGG | - | chr6_4:26272242-26272261 | None:intergenic | 50.0% | |
| GAGGGTCTGGCACTTATTAC+AGG | + | chr6_4:26272287-26272306 | Msa0983130:intron | 50.0% | |
| AGATAGCAAGCACTAGCTCC+CGG | - | chr6_4:26272514-26272533 | None:intergenic | 50.0% | |
| GATGCTTCTTGGGGCTTCTT+TGG | + | chr6_4:26272568-26272587 | Msa0983130:CDS | 50.0% | |
| AGATAGATCAGATCCGGACG+CGG | + | chr6_4:26272623-26272642 | Msa0983130:intron | 50.0% | |
| ACCATAGCATGTCGGGAAGA+AGG | + | chr6_4:26272697-26272716 | Msa0983130:intron | 50.0% | |
| CCATAGCATGTCGGGAAGAA+GGG | + | chr6_4:26272698-26272717 | Msa0983130:intron | 50.0% | |
| CATAGCATGTCGGGAAGAAG+GGG | + | chr6_4:26272699-26272718 | Msa0983130:intron | 50.0% | |
| ATAGCATGTCGGGAAGAAGG+GGG | + | chr6_4:26272700-26272719 | Msa0983130:intron | 50.0% | |
| ! | CTGTGTATCGATCGAAAGGC+AGG | - | chr6_4:26272766-26272785 | None:intergenic | 50.0% |
| ACACCTGTAGCGTTCGTGAT+CGG | - | chr6_4:26272798-26272817 | None:intergenic | 50.0% | |
| ATCACGAACGCTACAGGTGT+GGG | + | chr6_4:26272798-26272817 | Msa0983130:intron | 50.0% | |
| CTCGCATATGGGTAGCAAGA+GGG | + | chr6_4:26272854-26272873 | Msa0983130:CDS | 50.0% | |
| ! | TACAGAGGTGCGCTTGAAGT+GGG | - | chr6_4:26272943-26272962 | None:intergenic | 50.0% |
| ! | ATACAGAGGTGCGCTTGAAG+TGG | - | chr6_4:26272944-26272963 | None:intergenic | 50.0% |
| AAGAGTCTAGTCGGTGGAAC+CGG | + | chr6_4:26272979-26272998 | Msa0983130:CDS | 50.0% | |
| TAGTCTCAAATAGGGCGTGC+AGG | - | chr6_4:26273114-26273133 | None:intergenic | 50.0% | |
| ! | AGGCGGTGGACTCTTTCATT+AGG | + | chr6_4:26273141-26273160 | Msa0983130:intron | 50.0% |
| ! | GGCGGTGGACTCTTTCATTA+GGG | + | chr6_4:26273142-26273161 | Msa0983130:intron | 50.0% |
| TACCTCTTCCCTCTCCCTTT+CGG | - | chr6_4:26273270-26273289 | None:intergenic | 50.0% | |
| ! | CCTCTTTTTCCAGGCCTGTT+CGG | + | chr6_4:26273290-26273309 | Msa0983130:intron | 50.0% |
| TCACCAACTTGATCTTCCGC+GGG | - | chr6_4:26273326-26273345 | None:intergenic | 50.0% | |
| CTCACCAACTTGATCTTCCG+CGG | - | chr6_4:26273327-26273346 | None:intergenic | 50.0% | |
| !! | AAGTTGGTGAGCCGTGTGAT+GGG | + | chr6_4:26273336-26273355 | Msa0983130:CDS | 50.0% |
| CCTTGCATGCAATGATGTGG+TGG | - | chr6_4:26273411-26273430 | None:intergenic | 50.0% | |
| CCACCACATCATTGCATGCA+AGG | + | chr6_4:26273408-26273427 | Msa0983130:intron | 50.0% | |
| TCCCCTTGCATGCAATGATG+TGG | - | chr6_4:26273414-26273433 | None:intergenic | 50.0% | |
| ! | AGCTCGCTCGATTCGCAAAT+AGG | + | chr6_4:26273433-26273452 | Msa0983130:intron | 50.0% |
| GCTATGCCTGTCAATCGAGT+AGG | + | chr6_4:26273753-26273772 | Msa0983130:CDS | 50.0% | |
| !! | GGATTAGCTCCTGGGATTTC+GGG | + | chr6_4:26273783-26273802 | Msa0983130:CDS | 50.0% |
| GTAAAACGACCCGAAATCCC+AGG | - | chr6_4:26273795-26273814 | None:intergenic | 50.0% | |
| GGCACTAGCACGAGCAAAAA+TGG | - | chr6_4:26273844-26273863 | None:intergenic | 50.0% | |
| CTAGTGCCCCCAGAAATTCT+TGG | + | chr6_4:26273856-26273875 | Msa0983130:CDS | 50.0% | |
| TACTTGGTCACCCGATGCTA+TGG | + | chr6_4:26273971-26273990 | Msa0983130:CDS | 50.0% | |
| AGCTACGACGTCATTCCTTG+CGG | + | chr6_4:26274124-26274143 | Msa0983130:CDS | 50.0% | |
| ATATTCCAGTGGTTGCCGCA+AGG | - | chr6_4:26274142-26274161 | None:intergenic | 50.0% | |
| GCAAGATATGCGGAAGATGG+GGG | + | chr6_4:26274340-26274359 | Msa0983130:CDS | 50.0% | |
| CAAGATATGCGGAAGATGGG+GGG | + | chr6_4:26274341-26274360 | Msa0983130:CDS | 50.0% | |
| AAGATATGCGGAAGATGGGG+GGG | + | chr6_4:26274342-26274361 | Msa0983130:CDS | 50.0% | |
| GGCATAGGTAAAAGGGAACG+AGG | - | chr6_4:26274375-26274394 | None:intergenic | 50.0% | |
| TAAGCTGCCCATGAGCATCA+TGG | - | chr6_4:26274396-26274415 | None:intergenic | 50.0% | |
| TCATGATGCGCCCATTCCTA+TGG | + | chr6_4:26274622-26274641 | Msa0983130:CDS | 50.0% | |
| ! | GGAGAGCGCAGAGTCTAATC+TGG | + | chr6_4:26271407-26271426 | Msa0983130:CDS | 55.0% |
| CGGTTGATTGGCACTCCTGT+AGG | - | chr6_4:26271710-26271729 | None:intergenic | 55.0% | |
| !! | AACCTGGTGGCTCGGTTGAT+TGG | - | chr6_4:26271722-26271741 | None:intergenic | 55.0% |
| GGTGGGATTCCTGGATCTAG+TGG | + | chr6_4:26271751-26271770 | Msa0983130:CDS | 55.0% | |
| GGATTCCTGGATCTAGTGGC+CGG | + | chr6_4:26271755-26271774 | Msa0983130:CDS | 55.0% | |
| ATTCACCGGCCACTAGATCC+AGG | - | chr6_4:26271763-26271782 | None:intergenic | 55.0% | |
| GGTGGGATCCACAGATGTAG+TGG | + | chr6_4:26271880-26271899 | Msa0983130:CDS | 55.0% | |
| GGATCCACAGATGTAGTGGC+TGG | + | chr6_4:26271884-26271903 | Msa0983130:CDS | 55.0% | |
| GGAGACGCTAGGTTTCGCTT+CGG | - | chr6_4:26272231-26272250 | None:intergenic | 55.0% | |
| TGCTACGGAACTACCGAGCA+GGG | - | chr6_4:26272386-26272405 | None:intergenic | 55.0% | |
| TTTGGCGACCGTGAAGTCAC+CGG | + | chr6_4:26272586-26272605 | Msa0983130:intron | 55.0% | |
| CCCTTCTTCCCGACATGCTA+TGG | - | chr6_4:26272701-26272720 | None:intergenic | 55.0% | |
| TAGCATGTCGGGAAGAAGGG+GGG | + | chr6_4:26272701-26272720 | Msa0983130:intron | 55.0% | |
| ACTGGACGTAACCACTCCCT+TGG | + | chr6_4:26272728-26272747 | Msa0983130:intron | 55.0% | |
| CTGGACGTAACCACTCCCTT+GGG | + | chr6_4:26272729-26272748 | Msa0983130:intron | 55.0% | |
| TGGACGTAACCACTCCCTTG+GGG | + | chr6_4:26272730-26272749 | Msa0983130:intron | 55.0% | |
| ! | GTATCGATCGAAAGGCAGGG+CGG | - | chr6_4:26272762-26272781 | None:intergenic | 55.0% |
| GATCACGAACGCTACAGGTG+TGG | + | chr6_4:26272797-26272816 | Msa0983130:intron | 55.0% | |
| CTGGTCAGGGAAGGCTAAGA+CGG | + | chr6_4:26272828-26272847 | Msa0983130:CDS | 55.0% | |
| TAAGACGGCGCCTCGCATAT+GGG | + | chr6_4:26272843-26272862 | Msa0983130:CDS | 55.0% | |
| CCTCTTGCTACCCATATGCG+AGG | - | chr6_4:26272856-26272875 | None:intergenic | 55.0% | |
| CCTCGCATATGGGTAGCAAG+AGG | + | chr6_4:26272853-26272872 | Msa0983130:CDS | 55.0% | |
| TGTGCTGTCCCTATTGGGCT+GGG | - | chr6_4:26272917-26272936 | None:intergenic | 55.0% | |
| ! | ACAGAGGTGCGCTTGAAGTG+GGG | - | chr6_4:26272942-26272961 | None:intergenic | 55.0% |
| GCCGTACACTTGAGTGGCAA+AGG | + | chr6_4:26273195-26273214 | Msa0983130:CDS | 55.0% | |
| ATGCTCGACCGAAAGGGAGA+GGG | + | chr6_4:26273259-26273278 | Msa0983130:intron | 55.0% | |
| CCGAACAGGCCTGGAAAAAG+AGG | - | chr6_4:26273293-26273312 | None:intergenic | 55.0% | |
| TCCAGGCCTGTTCGGACATA+CGG | + | chr6_4:26273298-26273317 | Msa0983130:intron | 55.0% | |
| GTTCCCGCGGAAGATCAAGT+TGG | + | chr6_4:26273320-26273339 | Msa0983130:CDS | 55.0% | |
| !! | CAAGTTGGTGAGCCGTGTGA+TGG | + | chr6_4:26273335-26273354 | Msa0983130:CDS | 55.0% |
| CGGGAAGGTTTCCCATCACA+CGG | - | chr6_4:26273350-26273369 | None:intergenic | 55.0% | |
| TGATGGGAAACCTTCCCGCA+CGG | + | chr6_4:26273352-26273371 | Msa0983130:CDS | 55.0% | |
| TACGGTCGGGCTATCGAACA+CGG | - | chr6_4:26273484-26273503 | None:intergenic | 55.0% | |
| TTGGTCACCCGATGCTATGG+AGG | + | chr6_4:26273974-26273993 | Msa0983130:CDS | 55.0% | |
| TGGTCACCCGATGCTATGGA+GGG | + | chr6_4:26273975-26273994 | Msa0983130:CDS | 55.0% | |
| AGTGGGACCCTCCATAGCAT+CGG | - | chr6_4:26273985-26274004 | None:intergenic | 55.0% | |
| GCAGCTACTATGGTCACAGC+TGG | + | chr6_4:26274026-26274045 | Msa0983130:CDS | 55.0% | |
| TCATTCCTTGCGGCAACCAC+TGG | + | chr6_4:26274134-26274153 | Msa0983130:CDS | 55.0% | |
| GAATCACCGAACCTGCACTC+AGG | - | chr6_4:26274304-26274323 | None:intergenic | 55.0% | |
| GCCCATGAGCATCATGGCAT+AGG | - | chr6_4:26274390-26274409 | None:intergenic | 55.0% | |
| GCTCTCGGGAGTCTCTTTGT+AGG | + | chr6_4:26274665-26274684 | Msa0983130:CDS | 55.0% | |
| TGCCAATCAACCGAGCCACC+AGG | + | chr6_4:26271717-26271736 | Msa0983130:CDS | 60.0% | |
| GCTACGGAACTACCGAGCAG+GGG | - | chr6_4:26272385-26272404 | None:intergenic | 60.0% | |
| CTGCTACGGAACTACCGAGC+AGG | - | chr6_4:26272387-26272406 | None:intergenic | 60.0% | |
| CTGCTCGGTAGTTCCGTAGC+AGG | + | chr6_4:26272385-26272404 | Msa0983130:intron | 60.0% | |
| GGGAAGAAGGGGGGACATAC+TGG | + | chr6_4:26272710-26272729 | Msa0983130:intron | 60.0% | |
| GGACGTAACCACTCCCTTGG+GGG | + | chr6_4:26272731-26272750 | Msa0983130:intron | 60.0% | |
| AGGCCGATCACGAACGCTAC+AGG | + | chr6_4:26272792-26272811 | Msa0983130:intron | 60.0% | |
| TACAGGTGTGGGAGCGATCC+TGG | + | chr6_4:26272809-26272828 | Msa0983130:intron | 60.0% | |
| TGTGGGAGCGATCCTGGTCA+GGG | + | chr6_4:26272815-26272834 | Msa0983130:CDS | 60.0% | |
| ! | CGTCTTAGCCTTCCCTGACC+AGG | - | chr6_4:26272830-26272849 | None:intergenic | 60.0% |
| CTAAGACGGCGCCTCGCATA+TGG | + | chr6_4:26272842-26272861 | Msa0983130:CDS | 60.0% | |
| GTGTGCTGTCCCTATTGGGC+TGG | - | chr6_4:26272918-26272937 | None:intergenic | 60.0% | |
| ! | GGGGGTGTGCTGTCCCTATT+GGG | - | chr6_4:26272922-26272941 | None:intergenic | 60.0% |
| ! | AGAGGTGCGCTTGAAGTGGG+GGG | - | chr6_4:26272940-26272959 | None:intergenic | 60.0% |
| ! | CAGAGGTGCGCTTGAAGTGG+GGG | - | chr6_4:26272941-26272960 | None:intergenic | 60.0% |
| CATCAGCTCGCGTGGTTCAC+CGG | - | chr6_4:26273001-26273020 | None:intergenic | 60.0% | |
| AACCACGCGAGCTGATGCGT+GGG | + | chr6_4:26273004-26273023 | Msa0983130:CDS | 60.0% | |
| GAGACTACTAAGGCAGGCGG+TGG | + | chr6_4:26273127-26273146 | Msa0983130:intron | 60.0% | |
| GGGAAGAAGGGGCCTAAGCA+CGG | + | chr6_4:26273167-26273186 | Msa0983130:CDS | 60.0% | |
| AAGAAGGGGCCTAAGCACGG+CGG | + | chr6_4:26273170-26273189 | Msa0983130:CDS | 60.0% | |
| GCGGATGCCGTACACTTGAG+TGG | + | chr6_4:26273189-26273208 | Msa0983130:CDS | 60.0% | |
| GATGCTCGACCGAAAGGGAG+AGG | + | chr6_4:26273258-26273277 | Msa0983130:intron | 60.0% | |
| GACCGAAAGGGAGAGGGAAG+AGG | + | chr6_4:26273265-26273284 | Msa0983130:intron | 60.0% | |
| ACCGTATGTCCGAACAGGCC+TGG | - | chr6_4:26273302-26273321 | None:intergenic | 60.0% | |
| CGGGAACCGTATGTCCGAAC+AGG | - | chr6_4:26273307-26273326 | None:intergenic | 60.0% | |
| GTTCGGACATACGGTTCCCG+CGG | + | chr6_4:26273307-26273326 | Msa0983130:CDS | 60.0% | |
| GGAAACCTTCCCGCACGGTT+CGG | + | chr6_4:26273357-26273376 | Msa0983130:intron | 60.0% | |
| TCAGTGCTCTCCGAACCGTG+CGG | - | chr6_4:26273370-26273389 | None:intergenic | 60.0% | |
| TTCCTGGGATGGGAGGGAGT+AGG | + | chr6_4:26273663-26273682 | Msa0983130:intron | 60.0% | |
| GTGGGACCCTCCATAGCATC+GGG | - | chr6_4:26273984-26274003 | None:intergenic | 60.0% | |
| TCAAAGAGCGAGCAGCCGCC+AGG | + | chr6_4:26271846-26271865 | Msa0983130:CDS | 65.0% | |
| GCTGTTGCTCCGCGGCGATA+CGG | + | chr6_4:26272645-26272664 | Msa0983130:intron | 65.0% | |
| ACATGCTATGGTGCCCCCGG+GGG | - | chr6_4:26272689-26272708 | None:intergenic | 65.0% | |
| GACATGCTATGGTGCCCCCG+GGG | - | chr6_4:26272690-26272709 | None:intergenic | 65.0% | |
| CGACATGCTATGGTGCCCCC+GGG | - | chr6_4:26272691-26272710 | None:intergenic | 65.0% | |
| CCGACATGCTATGGTGCCCC+CGG | - | chr6_4:26272692-26272711 | None:intergenic | 65.0% | |
| !! | CCGGGGGCACCATAGCATGT+CGG | + | chr6_4:26272689-26272708 | Msa0983130:intron | 65.0% |
| !! | CGGGGGCACCATAGCATGTC+GGG | + | chr6_4:26272690-26272709 | Msa0983130:intron | 65.0% |
| GTGTGGGAGCGATCCTGGTC+AGG | + | chr6_4:26272814-26272833 | Msa0983130:CDS | 65.0% | |
| GGAGCGATCCTGGTCAGGGA+AGG | + | chr6_4:26272819-26272838 | Msa0983130:CDS | 65.0% | |
| !! | AGAGGGCGCTTATGCCCCGA+CGG | + | chr6_4:26272871-26272890 | Msa0983130:CDS | 65.0% |
| TCCCCATAAGGCCCCACCGT+CGG | - | chr6_4:26272890-26272909 | None:intergenic | 65.0% | |
| ! | ACGGTGGGGCCTTATGGGGA+AGG | + | chr6_4:26272890-26272909 | Msa0983130:CDS | 65.0% |
| ! | CGGTGGGGCCTTATGGGGAA+GGG | + | chr6_4:26272891-26272910 | Msa0983130:CDS | 65.0% |
| GGGAAGGGCCCAGCCCAATA+GGG | + | chr6_4:26272906-26272925 | Msa0983130:CDS | 65.0% | |
| ! | GGGGGGTGTGCTGTCCCTAT+TGG | - | chr6_4:26272923-26272942 | None:intergenic | 65.0% |
| GAACCACGCGAGCTGATGCG+TGG | + | chr6_4:26273003-26273022 | Msa0983130:CDS | 65.0% | |
| ACCACGCGAGCTGATGCGTG+GGG | + | chr6_4:26273005-26273024 | Msa0983130:CDS | 65.0% | |
| GAGCTGATGCGTGGGGCAGA+GGG | + | chr6_4:26273012-26273031 | Msa0983130:CDS | 65.0% | |
| GTACGGCATCCGCCGTGCTT+AGG | - | chr6_4:26273182-26273201 | None:intergenic | 65.0% | |
| CAGTGCTCTCCGAACCGTGC+GGG | - | chr6_4:26273369-26273388 | None:intergenic | 65.0% | |
| GACCTACTCCCTCCCATCCC+AGG | - | chr6_4:26273668-26273687 | None:intergenic | 65.0% | |
| GGGTCGAGTCCGTATCGCCG+CGG | - | chr6_4:26272657-26272676 | None:intergenic | 70.0% | |
| ATGCTATGGTGCCCCCGGGG+GGG | - | chr6_4:26272687-26272706 | None:intergenic | 70.0% | |
| CATGCTATGGTGCCCCCGGG+GGG | - | chr6_4:26272688-26272707 | None:intergenic | 70.0% | |
| GGCGCTTATGCCCCGACGGT+GGG | + | chr6_4:26272875-26272894 | Msa0983130:CDS | 70.0% | |
| GCGCTTATGCCCCGACGGTG+GGG | + | chr6_4:26272876-26272895 | Msa0983130:CDS | 70.0% | |
| CCCATAAGGCCCCACCGTCG+GGG | - | chr6_4:26272888-26272907 | None:intergenic | 70.0% | |
| ! | CCCCGACGGTGGGGCCTTAT+GGG | + | chr6_4:26272885-26272904 | Msa0983130:CDS | 70.0% |
| CCCCATAAGGCCCCACCGTC+GGG | - | chr6_4:26272889-26272908 | None:intergenic | 70.0% | |
| ! | CCCGACGGTGGGGCCTTATG+GGG | + | chr6_4:26272886-26272905 | Msa0983130:CDS | 70.0% |
| GGGCTGGGCCCTTCCCCATA+AGG | - | chr6_4:26272902-26272921 | None:intergenic | 70.0% | |
| GGGGAAGGGCCCAGCCCAAT+AGG | + | chr6_4:26272905-26272924 | Msa0983130:CDS | 70.0% | |
| CGAGCTGATGCGTGGGGCAG+AGG | + | chr6_4:26273011-26273030 | Msa0983130:CDS | 70.0% | |
| GCTCTCCGAACCGTGCGGGA+AGG | - | chr6_4:26273365-26273384 | None:intergenic | 70.0% | |
| CGCGGAGCAACAGCCGCGTC+CGG | - | chr6_4:26272639-26272658 | None:intergenic | 75.0% | |
| CGGACGCGGCTGTTGCTCCG+CGG | + | chr6_4:26272637-26272656 | Msa0983130:intron | 75.0% | |
| TCGACCCGCTCCTACCCCCC+CGG | + | chr6_4:26272670-26272689 | Msa0983130:intron | 75.0% | |
| TATGGTGCCCCCGGGGGGGT+AGG | - | chr6_4:26272683-26272702 | None:intergenic | 75.0% | |
| CGGCACAGCCCCCAAGGGAG+TGG | - | chr6_4:26272742-26272761 | None:intergenic | 75.0% | |
| CAGGGCGGCACAGCCCCCAA+GGG | - | chr6_4:26272747-26272766 | None:intergenic | 75.0% | |
| GGGCGCTTATGCCCCGACGG+TGG | + | chr6_4:26272874-26272893 | Msa0983130:CDS | 75.0% | |
| GCCCCGACGGTGGGGCCTTA+TGG | + | chr6_4:26272884-26272903 | Msa0983130:CDS | 75.0% | |
| GCCCCACGCATCAGCTCGCG+TGG | - | chr6_4:26273009-26273028 | None:intergenic | 75.0% | |
| ! | CGACCCGCTCCTACCCCCCC+GGG | + | chr6_4:26272671-26272690 | Msa0983130:intron | 80.0% |
| ! | GACCCGCTCCTACCCCCCCG+GGG | + | chr6_4:26272672-26272691 | Msa0983130:intron | 80.0% |
| ! | ACCCGCTCCTACCCCCCCGG+GGG | + | chr6_4:26272673-26272692 | Msa0983130:intron | 80.0% |
| ! | TGCCCCCGGGGGGGTAGGAG+CGG | - | chr6_4:26272678-26272697 | None:intergenic | 80.0% |
| ! | GCAGGGCGGCACAGCCCCCA+AGG | - | chr6_4:26272748-26272767 | None:intergenic | 80.0% |
| ! | GCCCCCGGGGGGGTAGGAGC+GGG | - | chr6_4:26272677-26272696 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_4 | gene | 26271310 | 26274706 | 26271310 | ID=Msa0983130;Name=Msa0983130 |
| chr6_4 | mRNA | 26271310 | 26274706 | 26271310 | ID=Msa0983130-mRNA-1;Parent=Msa0983130;Name=Msa0983130-mRNA-1;_AED=0.45;_eAED=0.46;_QI=0|0|0|0.25|1|1|8|0|659 |
| chr6_4 | exon | 26271310 | 26271428 | 26271310 | ID=Msa0983130-mRNA-1:exon:7363;Parent=Msa0983130-mRNA-1 |
| chr6_4 | exon | 26271610 | 26271982 | 26271610 | ID=Msa0983130-mRNA-1:exon:7364;Parent=Msa0983130-mRNA-1 |
| chr6_4 | exon | 26272309 | 26272372 | 26272309 | ID=Msa0983130-mRNA-1:exon:7365;Parent=Msa0983130-mRNA-1 |
| chr6_4 | exon | 26272506 | 26272600 | 26272506 | ID=Msa0983130-mRNA-1:exon:7366;Parent=Msa0983130-mRNA-1 |
| chr6_4 | exon | 26272814 | 26273037 | 26272814 | ID=Msa0983130-mRNA-1:exon:7367;Parent=Msa0983130-mRNA-1 |
| chr6_4 | exon | 26273163 | 26273221 | 26273163 | ID=Msa0983130-mRNA-1:exon:7368;Parent=Msa0983130-mRNA-1 |
| chr6_4 | exon | 26273303 | 26273373 | 26273303 | ID=Msa0983130-mRNA-1:exon:7369;Parent=Msa0983130-mRNA-1 |
| chr6_4 | exon | 26273732 | 26274706 | 26273732 | ID=Msa0983130-mRNA-1:exon:7370;Parent=Msa0983130-mRNA-1 |
| chr6_4 | CDS | 26271310 | 26271428 | 26271310 | ID=Msa0983130-mRNA-1:cds;Parent=Msa0983130-mRNA-1 |
| chr6_4 | CDS | 26271610 | 26271982 | 26271610 | ID=Msa0983130-mRNA-1:cds;Parent=Msa0983130-mRNA-1 |
| chr6_4 | CDS | 26272309 | 26272372 | 26272309 | ID=Msa0983130-mRNA-1:cds;Parent=Msa0983130-mRNA-1 |
| chr6_4 | CDS | 26272506 | 26272600 | 26272506 | ID=Msa0983130-mRNA-1:cds;Parent=Msa0983130-mRNA-1 |
| chr6_4 | CDS | 26272814 | 26273037 | 26272814 | ID=Msa0983130-mRNA-1:cds;Parent=Msa0983130-mRNA-1 |
| chr6_4 | CDS | 26273163 | 26273221 | 26273163 | ID=Msa0983130-mRNA-1:cds;Parent=Msa0983130-mRNA-1 |
| chr6_4 | CDS | 26273303 | 26273373 | 26273303 | ID=Msa0983130-mRNA-1:cds;Parent=Msa0983130-mRNA-1 |
| chr6_4 | CDS | 26273732 | 26274706 | 26273732 | ID=Msa0983130-mRNA-1:cds;Parent=Msa0983130-mRNA-1 |
| Gene Sequence |
| Protein sequence |
