Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0987120 | EOY21722.1 | 68.478 | 184 | 19 | 1 | 109 | 253 | 1 | 184 | 6.51e-82 | 255 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0987120 | sp|Q5GI04|HIR1_CAPAN | 98.765 | 81 | 1 | 0 | 173 | 253 | 167 | 247 | 1.99e-47 | 162 |
| Msa0987120 | sp|Q5GI04|HIR1_CAPAN | 73.016 | 63 | 17 | 0 | 109 | 171 | 1 | 63 | 2.98e-30 | 117 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0987120 | A0A061FXZ6 | 68.478 | 184 | 19 | 1 | 109 | 253 | 1 | 184 | 3.11e-82 | 255 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0104330 | Msa0987120 | 0.862619 | 4.456470e-64 | -8.615850e-47 |
| Msa0204320 | Msa0987120 | 0.958420 | 2.462695e-116 | -8.615850e-47 |
| Msa0987120 | Msa0990280 | 0.828648 | 7.998773e-55 | -8.615850e-47 |
| Msa0987120 | Msa1034360 | 0.805137 | 1.543223e-49 | -8.615850e-47 |
| Msa0987120 | Msa1074060 | 0.800520 | 1.386670e-48 | -8.615850e-47 |
| Msa0315200 | Msa0987120 | 0.801121 | 1.045311e-48 | -8.615850e-47 |
| Msa0320120 | Msa0987120 | 0.802917 | 4.468839e-49 | -8.615850e-47 |
| Msa0892340 | Msa0987120 | 0.980507 | 2.230043e-150 | -8.615850e-47 |
| Msa0901500 | Msa0987120 | 0.804480 | 2.116925e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0987120 | MtrunA17_Chr7g0249641 | 90.476 | 105 | 7 | 1 | 1 | 102 | 60 | 164 | 4.85e-59 | 201 |
| Msa0987120 | MtrunA17_Chr4g0060171 | 92.593 | 81 | 6 | 0 | 173 | 253 | 176 | 256 | 1.85e-45 | 154 |
| Msa0987120 | MtrunA17_Chr4g0060171 | 90.476 | 63 | 6 | 0 | 109 | 171 | 1 | 63 | 1.48e-38 | 136 |
| Msa0987120 | MtrunA17_Chr6g0452801 | 92.593 | 81 | 6 | 0 | 173 | 253 | 167 | 247 | 2.76e-45 | 154 |
| Msa0987120 | MtrunA17_Chr6g0452801 | 69.841 | 63 | 19 | 0 | 109 | 171 | 1 | 63 | 1.99e-26 | 104 |
| Msa0987120 | MtrunA17_Chr8g0362631 | 77.528 | 89 | 20 | 0 | 165 | 253 | 159 | 247 | 2.32e-41 | 143 |
| Msa0987120 | MtrunA17_Chr8g0362631 | 66.667 | 63 | 21 | 0 | 109 | 171 | 1 | 63 | 3.24e-27 | 106 |
| Msa0987120 | MtrunA17_Chr4g0060111 | 93.651 | 63 | 4 | 0 | 109 | 171 | 1 | 63 | 8.06e-40 | 139 |
| Msa0987120 | MtrunA17_Chr4g0060111 | 96.296 | 81 | 3 | 0 | 173 | 253 | 167 | 247 | 1.03e-39 | 139 |
| Msa0987120 | MtrunA17_Chr4g0060151 | 93.651 | 63 | 4 | 0 | 109 | 171 | 1 | 63 | 8.06e-40 | 139 |
| Msa0987120 | MtrunA17_Chr4g0060151 | 96.296 | 81 | 3 | 0 | 173 | 253 | 167 | 247 | 1.03e-39 | 139 |
| Msa0987120 | MtrunA17_Chr4g0060091 | 82.432 | 74 | 13 | 0 | 108 | 181 | 5 | 78 | 1.14e-39 | 139 |
| Msa0987120 | MtrunA17_Chr4g0060091 | 92.593 | 81 | 6 | 0 | 173 | 253 | 172 | 252 | 2.74e-38 | 135 |
| Msa0987120 | MtrunA17_Chr4g0060101 | 82.192 | 73 | 13 | 0 | 109 | 181 | 1 | 73 | 5.79e-39 | 137 |
| Msa0987120 | MtrunA17_Chr4g0060101 | 91.358 | 81 | 7 | 0 | 173 | 253 | 167 | 247 | 1.23e-37 | 134 |
| Msa0987120 | MtrunA17_Chr6g0476481 | 54.651 | 86 | 39 | 0 | 168 | 253 | 164 | 249 | 1.27e-26 | 105 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0987120 | AT5G62740.1 | 95.062 | 81 | 4 | 0 | 173 | 253 | 167 | 247 | 4.87e-47 | 158 |
| Msa0987120 | AT5G62740.1 | 71.429 | 63 | 18 | 0 | 109 | 171 | 1 | 63 | 5.34e-29 | 111 |
| Msa0987120 | AT3G01290.1 | 69.444 | 108 | 26 | 1 | 153 | 253 | 140 | 247 | 2.35e-43 | 149 |
| Msa0987120 | AT3G01290.1 | 66.667 | 63 | 21 | 0 | 109 | 171 | 1 | 63 | 6.69e-24 | 98.2 |
| Msa0987120 | AT1G69840.1 | 83.951 | 81 | 13 | 0 | 173 | 253 | 167 | 247 | 1.70e-33 | 123 |
| Msa0987120 | AT1G69840.1 | 66.667 | 63 | 21 | 0 | 109 | 171 | 1 | 63 | 6.94e-28 | 108 |
| Msa0987120 | AT1G69840.2 | 83.951 | 81 | 13 | 0 | 173 | 253 | 167 | 247 | 1.70e-33 | 123 |
| Msa0987120 | AT1G69840.2 | 66.667 | 63 | 21 | 0 | 109 | 171 | 1 | 63 | 6.94e-28 | 108 |
| Msa0987120 | AT1G69840.5 | 83.951 | 81 | 13 | 0 | 173 | 253 | 167 | 247 | 1.70e-33 | 123 |
| Msa0987120 | AT1G69840.5 | 66.667 | 63 | 21 | 0 | 109 | 171 | 1 | 63 | 6.94e-28 | 108 |
| Msa0987120 | AT1G69840.7 | 83.951 | 81 | 13 | 0 | 173 | 253 | 167 | 247 | 1.70e-33 | 123 |
| Msa0987120 | AT1G69840.7 | 66.667 | 63 | 21 | 0 | 109 | 171 | 1 | 63 | 6.94e-28 | 108 |
| Msa0987120 | AT1G69840.4 | 83.951 | 81 | 13 | 0 | 173 | 253 | 167 | 247 | 1.70e-33 | 123 |
| Msa0987120 | AT1G69840.4 | 66.667 | 63 | 21 | 0 | 109 | 171 | 1 | 63 | 6.94e-28 | 108 |
| Msa0987120 | AT1G69840.6 | 83.951 | 81 | 13 | 0 | 173 | 253 | 167 | 247 | 1.70e-33 | 123 |
| Msa0987120 | AT1G69840.6 | 66.667 | 63 | 21 | 0 | 109 | 171 | 1 | 63 | 6.94e-28 | 108 |
| Msa0987120 | AT1G69840.3 | 83.951 | 81 | 13 | 0 | 173 | 253 | 167 | 247 | 1.70e-33 | 123 |
| Msa0987120 | AT1G69840.3 | 66.667 | 63 | 21 | 0 | 109 | 171 | 1 | 63 | 6.94e-28 | 108 |
| Msa0987120 | AT5G51570.1 | 58.427 | 89 | 37 | 0 | 165 | 253 | 161 | 249 | 6.05e-30 | 114 |
| Msa0987120 | AT1G65470.1 | 49.074 | 108 | 41 | 3 | 1 | 102 | 54 | 153 | 2.29e-18 | 85.1 |
| Msa0987120 | AT1G65470.2 | 49.074 | 108 | 41 | 3 | 1 | 102 | 54 | 153 | 4.80e-17 | 81.3 |
Find 74 sgRNAs with CRISPR-Local
Find 300 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATGCTGATGCTGATATTT+TGG | 0.136068 | 6_4:+36755065 | Msa0987120:CDS |
| TGCTTATTACAGAGGGGTTT+TGG | 0.220658 | 6_4:+36754822 | Msa0987120:CDS |
| ATCATTCTGATTCATGTCTT+TGG | 0.248769 | 6_4:+36755091 | Msa0987120:CDS |
| GCATTGCAGTGAAAAGAAAA+TGG | 0.251403 | 6_4:+36755783 | Msa0987120:intron |
| CATTGCATGCCATGGTTTCT+TGG | 0.290257 | 6_4:+36755898 | Msa0987120:CDS |
| CGTGGTGGTTGCGGCGTTGA+TGG | 0.333252 | 6_4:+36754882 | Msa0987120:CDS |
| AAGAGTAGCGTGTTGTTTGC+TGG | 0.336436 | 6_4:+36755018 | Msa0987120:CDS |
| CACTCTTCGGCTACAACAAT+TGG | 0.343058 | 6_4:+36755942 | Msa0987120:CDS |
| GGGGATTGTGTTGGCGGAAG+GGG | 0.357109 | 6_4:+36754978 | Msa0987120:CDS |
| CTGATTCATGTCTTTGGTGT+TGG | 0.362682 | 6_4:+36755097 | Msa0987120:CDS |
| TGCAAAAGATGTCATGGATA+TGG | 0.384185 | 6_4:+36759212 | Msa0987120:CDS |
| TGATTCATGTCTTTGGTGTT+GGG | 0.389779 | 6_4:+36755098 | Msa0987120:CDS |
| TTTCTTGGAAAACGAATTGC+TGG | 0.394254 | 6_4:+36755913 | Msa0987120:CDS |
| GTGGCTATGAGAGAAGGTTT+TGG | 0.398028 | 6_4:+36755844 | Msa0987120:CDS |
| GTCTAAATATCTCTCTGGGC+TGG | 0.425139 | 6_4:+36759107 | Msa0987120:CDS |
| CATTGCAGTGAAAAGAAAAT+GGG | 0.429423 | 6_4:+36755784 | Msa0987120:CDS |
| GGAAGGGGTTAATTCAGCTT+TGG | 0.440309 | 6_4:+36754993 | Msa0987120:CDS |
| TTCGAGAAACGTGGTGGTTG+CGG | 0.445489 | 6_4:+36754873 | Msa0987120:CDS |
| GCTGAGTCTAAATATCTCTC+TGG | 0.451469 | 6_4:+36759102 | Msa0987120:CDS |
| CAAAATATCAGCATCAGCAT+TGG | 0.451825 | 6_4:-36755064 | None:intergenic |
| ATTTGAAAAGGTGCTTCAGC+CGG | 0.463345 | 6_4:+36755870 | Msa0987120:CDS |
| GGTTTGAGAGACAGTGTGAT+TGG | 0.463698 | 6_4:+36759162 | Msa0987120:CDS |
| CTCAGAAAGTTGTGATTGAC+TGG | 0.473238 | 6_4:+36754845 | Msa0987120:CDS |
| AAAATATCAGCATCAGCATT+GGG | 0.483686 | 6_4:-36755063 | None:intergenic |
| TTGCTGGTCATCTCACTCTT+CGG | 0.485262 | 6_4:+36755929 | Msa0987120:CDS |
| TCTAAATATCTCTCTGGGCT+GGG | 0.486024 | 6_4:+36759108 | Msa0987120:CDS |
| TGAATTGTGAAGTGGCGAAT+GGG | 0.486970 | 6_4:+36754956 | Msa0987120:CDS |
| CGGGATGCCATTGCATGCCA+TGG | 0.503619 | 6_4:+36755890 | Msa0987120:CDS |
| TTTGAAAAGGTGCTTCAGCC+GGG | 0.514758 | 6_4:+36755871 | Msa0987120:CDS |
| TGTGATCAGCTGCAAGATTG+AGG | 0.516144 | 6_4:+36759016 | Msa0987120:intron |
| CAGCGTCAAGCCATTGTGGA+TGG | 0.520226 | 6_4:+36759141 | Msa0987120:CDS |
| AGAGTAGCGTGTTGTTTGCT+GGG | 0.520701 | 6_4:+36755019 | Msa0987120:CDS |
| CATGGCATGCAATGGCATCC+CGG | 0.521469 | 6_4:-36755889 | None:intergenic |
| TGTGAGACCAAGACAAAGGT+TGG | 0.530281 | 6_4:+36755973 | Msa0987120:CDS |
| TAACAAACCAACCTTTGTCT+TGG | 0.535367 | 6_4:-36755980 | None:intergenic |
| GCGTGTTGTTTGCTGGGCAG+AGG | 0.537665 | 6_4:+36755025 | Msa0987120:CDS |
| TCAATACTTTGACACTATGA+AGG | 0.541468 | 6_4:+36759245 | Msa0987120:CDS |
| AATTAAGCGAGCCGAGGGTG+AGG | 0.551044 | 6_4:+36759080 | Msa0987120:CDS |
| GTGATCAGCTGCAAGATTGA+GGG | 0.554251 | 6_4:+36759017 | Msa0987120:intron |
| GGTTGTTTGCTTATTACAGA+GGG | 0.555082 | 6_4:+36754815 | None:intergenic |
| CTTATGCAAATTGCTAAGGT+AGG | 0.562701 | 6_4:-36759279 | None:intergenic |
| TATACTTATGCAAATTGCTA+AGG | 0.565571 | 6_4:-36759283 | None:intergenic |
| GACGACTGCAAAAGATGTCA+TGG | 0.572197 | 6_4:+36759206 | Msa0987120:CDS |
| CTGAGTCTAAATATCTCTCT+GGG | 0.573023 | 6_4:+36759103 | Msa0987120:CDS |
| CTGAATTGTGAAGTGGCGAA+TGG | 0.576328 | 6_4:+36754955 | Msa0987120:CDS |
| CAAGAAACCATGGCATGCAA+TGG | 0.579517 | 6_4:-36755897 | None:intergenic |
| GAATTGTGAAGTGGCGAATG+GGG | 0.580861 | 6_4:+36754957 | Msa0987120:CDS |
| TTCATGTCTTTGGTGTTGGG+AGG | 0.591006 | 6_4:+36755101 | Msa0987120:CDS |
| CATCCACAATGGCTTGACGC+TGG | 0.591027 | 6_4:-36759140 | None:intergenic |
| TCTCAAGTGGCTATGAGAGA+AGG | 0.594736 | 6_4:+36755838 | Msa0987120:CDS |
| TTTAGACTCAGCCTCACCCT+CGG | 0.596378 | 6_4:-36759091 | None:intergenic |
| GGTGGTTGCGGCGTTGATGG+AGG | 0.612733 | 6_4:+36754885 | Msa0987120:CDS |
| TTGCAAATTAAGCGAGCCGA+GGG | 0.613528 | 6_4:+36759075 | Msa0987120:CDS |
| TCATCAACAAGCTTCGACAA+CGG | 0.616224 | 6_4:-36754919 | None:intergenic |
| GGGTTGTTTGCTTATTACAG+AGG | 0.621444 | 6_4:+36754814 | None:intergenic |
| AATTGTGAAGTGGCGAATGG+GGG | 0.623209 | 6_4:+36754958 | Msa0987120:CDS |
| GAGGGTGGCAGCGAATGAGA+AGG | 0.631840 | 6_4:+36759035 | Msa0987120:CDS |
| TGAGAAGCTGAATTGTGAAG+TGG | 0.631929 | 6_4:+36754948 | Msa0987120:CDS |
| CTTGCAAATTAAGCGAGCCG+AGG | 0.632438 | 6_4:+36759074 | Msa0987120:CDS |
| TCGCCAGCGTCAAGCCATTG+TGG | 0.633446 | 6_4:+36759137 | Msa0987120:CDS |
| GCAAGTTGATCAATCTCAAG+TGG | 0.635084 | 6_4:+36755825 | Msa0987120:CDS |
| CTGGGGAGGTTCGAGAAACG+TGG | 0.638539 | 6_4:+36754864 | Msa0987120:CDS |
| GCTGGGCAGAGGATGATGTA+CGG | 0.640684 | 6_4:+36755036 | Msa0987120:CDS |
| AAAGTTGTGATTGACTGGGG+AGG | 0.650625 | 6_4:+36754850 | Msa0987120:CDS |
| CAAATGTGAGACCAAGACAA+AGG | 0.650717 | 6_4:+36755969 | Msa0987120:CDS |
| ATTGTGAAGTGGCGAATGGG+GGG | 0.662126 | 6_4:+36754959 | Msa0987120:CDS |
| TCAGAAAGTTGTGATTGACT+GGG | 0.664166 | 6_4:+36754846 | Msa0987120:CDS |
| GTCTCTCAAACCATCCACAA+TGG | 0.664898 | 6_4:-36759151 | None:intergenic |
| ATTGCAGTGAAAAGAAAATG+GGG | 0.673791 | 6_4:+36755785 | Msa0987120:CDS |
| CAGAAAGTTGTGATTGACTG+GGG | 0.674967 | 6_4:+36754847 | Msa0987120:CDS |
| GTTGTTTGCTTATTACAGAG+GGG | 0.700903 | 6_4:+36754816 | None:intergenic |
| ATCAGCTGCAAGATTGAGGG+TGG | 0.703805 | 6_4:+36759020 | Msa0987120:intron |
| TGTCAAAGTATTGAGTGACA+AGG | 0.713018 | 6_4:-36759236 | None:intergenic |
| GGGAGGTTCGAGAAACGTGG+TGG | 0.714035 | 6_4:+36754867 | Msa0987120:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTGGTTAATTATTTATAAT+TGG | + | chr6_4:36756688-36756707 | Msa0987120:intron | 10.0% |
| !!! | ATTGATTTATAAAGATTAAA+TGG | - | chr6_4:36756733-36756752 | None:intergenic | 10.0% |
| !! | TTAATCTTTATAAATCAATT+TGG | + | chr6_4:36756734-36756753 | Msa0987120:intron | 10.0% |
| !! | AAAATAAGTATAAGAAAATA+TGG | - | chr6_4:36758991-36759010 | None:intergenic | 10.0% |
| !!! | TGATTTTTTTTCTTGATTTT+TGG | + | chr6_4:36755124-36755143 | Msa0987120:intron | 15.0% |
| !! | AATAAAAATTAACAAGTATG+AGG | - | chr6_4:36755742-36755761 | None:intergenic | 15.0% |
| !!! | AAAGAAAGTATTTATGTTAT+TGG | - | chr6_4:36756054-36756073 | None:intergenic | 15.0% |
| !!! | AAAAATGTGTAAAGAATTTT+CGG | + | chr6_4:36756506-36756525 | Msa0987120:intron | 15.0% |
| !! | AAGAACATGTATAAAATATT+GGG | - | chr6_4:36756582-36756601 | None:intergenic | 15.0% |
| !! | AAAGAACATGTATAAAATAT+TGG | - | chr6_4:36756583-36756602 | None:intergenic | 15.0% |
| !! | TAAATGGTTTGAATAATAAA+TGG | - | chr6_4:36756717-36756736 | None:intergenic | 15.0% |
| !! | TTTGCTAACTATAGTTTATT+TGG | + | chr6_4:36755166-36755185 | Msa0987120:intron | 20.0% |
| !!! | ATGAATGTTTTTTAAGATGT+TGG | + | chr6_4:36755225-36755244 | Msa0987120:intron | 20.0% |
| !!! | TTTTGTTTTGTTTTTGTGTT+TGG | + | chr6_4:36755479-36755498 | Msa0987120:intron | 20.0% |
| !!! | TAAATACTTTCTTTTTAGCT+AGG | + | chr6_4:36756060-36756079 | Msa0987120:intron | 20.0% |
| !!! | TTTAGCTAGGATATTTTTTT+AGG | + | chr6_4:36756073-36756092 | Msa0987120:intron | 20.0% |
| !! | CTTATATGTTTGCTTAAATA+TGG | + | chr6_4:36756125-36756144 | Msa0987120:intron | 20.0% |
| !! | AGAACATGTATAAAATATTG+GGG | - | chr6_4:36756581-36756600 | None:intergenic | 20.0% |
| !! | AATTAAAATGCAGCAATAAA+GGG | - | chr6_4:36756807-36756826 | None:intergenic | 20.0% |
| !! | AAATTAAAATGCAGCAATAA+AGG | - | chr6_4:36756808-36756827 | None:intergenic | 20.0% |
| !!! | TTTATTCTAAGGAATCTTTA+CGG | + | chr6_4:36756920-36756939 | Msa0987120:intron | 20.0% |
| !!! | CAATTTGCAATGTATTTTAT+GGG | - | chr6_4:36756972-36756991 | None:intergenic | 20.0% |
| !! | ATAGAAAACCAATTCATATT+TGG | + | chr6_4:36757040-36757059 | Msa0987120:intron | 20.0% |
| !! | TTGTTCACATGATATTTAAT+GGG | + | chr6_4:36757424-36757443 | Msa0987120:intron | 20.0% |
| !! | TTATTAACACATGAATTCAT+TGG | - | chr6_4:36758093-36758112 | None:intergenic | 20.0% |
| !! | TTAAGTACTATAGAGAATAT+AGG | + | chr6_4:36758243-36758262 | Msa0987120:intron | 20.0% |
| !! | TTTCATTGCACAAATTATTT+AGG | + | chr6_4:36758758-36758777 | Msa0987120:intron | 20.0% |
| !! | TTATACTTCATACAATATCT+AGG | - | chr6_4:36758883-36758902 | None:intergenic | 20.0% |
| !!! | TTGGTTATGTTGATAGTAAT+TGG | + | chr6_4:36755244-36755263 | Msa0987120:intron | 25.0% |
| !!! | TGGTTATGTTGATAGTAATT+GGG | + | chr6_4:36755245-36755264 | Msa0987120:intron | 25.0% |
| !! | TATGTTGTTATTGTAGACTA+GGG | + | chr6_4:36755327-36755346 | Msa0987120:intron | 25.0% |
| !!! | TTTGTTTTTGTGTTTGGTTT+AGG | + | chr6_4:36755485-36755504 | Msa0987120:intron | 25.0% |
| !!! | AGGTTTTGGAAAATTTGAAA+AGG | + | chr6_4:36755858-36755877 | Msa0987120:CDS | 25.0% |
| !!! | TACATATGAAGTATTGAAAG+TGG | - | chr6_4:36756176-36756195 | None:intergenic | 25.0% |
| ! | TGACATACATTAGATACTAA+AGG | - | chr6_4:36756436-36756455 | None:intergenic | 25.0% |
| !! | CTTTATAAATCAATTTGGTG+TGG | + | chr6_4:36756739-36756758 | Msa0987120:intron | 25.0% |
| ! | TATAGTACACGTTTATTCTA+AGG | + | chr6_4:36756909-36756928 | Msa0987120:intron | 25.0% |
| !! | GCAATTTGCAATGTATTTTA+TGG | - | chr6_4:36756973-36756992 | None:intergenic | 25.0% |
| ! | TGTATATGCCAAATATGAAT+TGG | - | chr6_4:36757051-36757070 | None:intergenic | 25.0% |
| ! | CTTGTTCACATGATATTTAA+TGG | + | chr6_4:36757423-36757442 | Msa0987120:intron | 25.0% |
| ! | ATAATTTATTCTATCCTGCA+TGG | + | chr6_4:36757502-36757521 | Msa0987120:intron | 25.0% |
| ! | TAATTTATTCTATCCTGCAT+GGG | + | chr6_4:36757503-36757522 | Msa0987120:intron | 25.0% |
| !!! | ATGGATGAAGGTATTATATT+TGG | + | chr6_4:36758043-36758062 | Msa0987120:intron | 25.0% |
| !!! | AAATTTTGACAACCTGATTA+TGG | + | chr6_4:36758270-36758289 | Msa0987120:intron | 25.0% |
| ! | TGATCAAAATCTTAGTATGA+AGG | + | chr6_4:36758321-36758340 | Msa0987120:intron | 25.0% |
| ! | TCATATAGAAACAATGTTGT+GGG | - | chr6_4:36758528-36758547 | None:intergenic | 25.0% |
| ! | TTCATATAGAAACAATGTTG+TGG | - | chr6_4:36758529-36758548 | None:intergenic | 25.0% |
| ! | TGTGCAATGAAAATAGATTT+AGG | - | chr6_4:36758750-36758769 | None:intergenic | 25.0% |
| ! | TAAAGAAGCAAAAAACCAAA+GGG | - | chr6_4:36758788-36758807 | None:intergenic | 25.0% |
| !!! | TTTGGTTTTTTGCTTCTTTA+GGG | + | chr6_4:36758788-36758807 | Msa0987120:intron | 25.0% |
| ! | TATACTTATGCAAATTGCTA+AGG | - | chr6_4:36759286-36759305 | None:intergenic | 25.0% |
| AAAATATCAGCATCAGCATT+GGG | - | chr6_4:36755066-36755085 | None:intergenic | 30.0% | |
| ATCATTCTGATTCATGTCTT+TGG | + | chr6_4:36755091-36755110 | Msa0987120:CDS | 30.0% | |
| !! | ACTATAGTTTATTTGGTGTG+TGG | + | chr6_4:36755173-36755192 | Msa0987120:intron | 30.0% |
| TGTTGAAGTTGAATGTGTAT+TGG | + | chr6_4:36755272-36755291 | Msa0987120:intron | 30.0% | |
| ! | CTATGTTGTTATTGTAGACT+AGG | + | chr6_4:36755326-36755345 | Msa0987120:intron | 30.0% |
| CATTGCAGTGAAAAGAAAAT+GGG | + | chr6_4:36755784-36755803 | Msa0987120:CDS | 30.0% | |
| ATTGCAGTGAAAAGAAAATG+GGG | + | chr6_4:36755785-36755804 | Msa0987120:CDS | 30.0% | |
| ATTTATGTTATTGGTAAGCG+TGG | - | chr6_4:36756045-36756064 | None:intergenic | 30.0% | |
| !!! | TATTTTTTTAGGTGTCATCC+TGG | + | chr6_4:36756084-36756103 | Msa0987120:intron | 30.0% |
| AATCAAAATAACATAGCACC+AGG | - | chr6_4:36756105-36756124 | None:intergenic | 30.0% | |
| !! | GAACACTGATTACATTTTGA+AGG | + | chr6_4:36756285-36756304 | Msa0987120:intron | 30.0% |
| !!! | GATTACATTTTGAAGGTACT+TGG | + | chr6_4:36756292-36756311 | Msa0987120:intron | 30.0% |
| GTATGTTCAGATACAATAGT+TGG | + | chr6_4:36756322-36756341 | Msa0987120:intron | 30.0% | |
| GAAACATAACTTTACCGAAA+GGG | - | chr6_4:36756480-36756499 | None:intergenic | 30.0% | |
| AGAAACATAACTTTACCGAA+AGG | - | chr6_4:36756481-36756500 | None:intergenic | 30.0% | |
| GACTAAAGTAGAAAATGTCA+AGG | - | chr6_4:36756550-36756569 | None:intergenic | 30.0% | |
| ! | AACCTTGACATTTTCTACTT+TGG | + | chr6_4:36756545-36756564 | Msa0987120:intron | 30.0% |
| AACCAAAGTAGAAAATGTCA+AGG | - | chr6_4:36756675-36756694 | None:intergenic | 30.0% | |
| ! | AATGTATTTTATGGGCAGTT+AGG | - | chr6_4:36756964-36756983 | None:intergenic | 30.0% |
| CAAATTGCCTCCTAATTATT+AGG | + | chr6_4:36756985-36757004 | Msa0987120:intron | 30.0% | |
| AACCACTACACCTAATAATT+AGG | - | chr6_4:36756998-36757017 | None:intergenic | 30.0% | |
| !! | TAAGAGAGGCTAAGTTTTAT+AGG | - | chr6_4:36757148-36757167 | None:intergenic | 30.0% |
| TTAGTGGAAATCAAAAGTAG+AGG | - | chr6_4:36757196-36757215 | None:intergenic | 30.0% | |
| CTCTTTGCTTGTAAAATACT+GGG | - | chr6_4:36757482-36757501 | None:intergenic | 30.0% | |
| TCTCTTTGCTTGTAAAATAC+TGG | - | chr6_4:36757483-36757502 | None:intergenic | 30.0% | |
| TGTTATTGAGGCTCTTATAT+GGG | + | chr6_4:36757566-36757585 | Msa0987120:intron | 30.0% | |
| ! | AACTTTTCTCTAACAAGATG+TGG | - | chr6_4:36757889-36757908 | None:intergenic | 30.0% |
| ATATAATACCTTCATCCATC+TGG | - | chr6_4:36758042-36758061 | None:intergenic | 30.0% | |
| CATGTGTTAATAAACTGTCA+AGG | + | chr6_4:36758100-36758119 | Msa0987120:intron | 30.0% | |
| ATAAAGCACAAAAGACAATC+AGG | - | chr6_4:36758171-36758190 | None:intergenic | 30.0% | |
| !! | GATTTTGATCAGTTGATTGT+TGG | - | chr6_4:36758312-36758331 | None:intergenic | 30.0% |
| CATATAGAAACAATGTTGTG+GGG | - | chr6_4:36758527-36758546 | None:intergenic | 30.0% | |
| TACATGTATGACGAACTATA+AGG | - | chr6_4:36758671-36758690 | None:intergenic | 30.0% | |
| TATAGTTCGTCATACATGTA+CGG | + | chr6_4:36758671-36758690 | Msa0987120:intron | 30.0% | |
| AATTATTTAGGCATTCCCTT+TGG | + | chr6_4:36758770-36758789 | Msa0987120:intron | 30.0% | |
| CTAAAGAAGCAAAAAACCAA+AGG | - | chr6_4:36758789-36758808 | None:intergenic | 30.0% | |
| !!! | CTTTGGTTTTTTGCTTCTTT+AGG | + | chr6_4:36758787-36758806 | Msa0987120:intron | 30.0% |
| TATGGCAATTCATGAACAAA+GGG | - | chr6_4:36758973-36758992 | None:intergenic | 30.0% | |
| ATATGGCAATTCATGAACAA+AGG | - | chr6_4:36758974-36758993 | None:intergenic | 30.0% | |
| !! | GTTTTTCAGTTAATGTACCA+GGG | + | chr6_4:36759184-36759203 | Msa0987120:CDS | 30.0% |
| TCAATACTTTGACACTATGA+AGG | + | chr6_4:36759245-36759264 | Msa0987120:CDS | 30.0% | |
| TCAGAAAGTTGTGATTGACT+GGG | + | chr6_4:36754846-36754865 | Msa0987120:CDS | 35.0% | |
| CAAAATATCAGCATCAGCAT+TGG | - | chr6_4:36755067-36755086 | None:intergenic | 35.0% | |
| ! | CAATGCTGATGCTGATATTT+TGG | + | chr6_4:36755065-36755084 | Msa0987120:CDS | 35.0% |
| !! | TGATTCATGTCTTTGGTGTT+GGG | + | chr6_4:36755098-36755117 | Msa0987120:CDS | 35.0% |
| !! | TATTTGGTGTGTGGTTTAAC+TGG | + | chr6_4:36755182-36755201 | Msa0987120:intron | 35.0% |
| !! | ATTTGGTGTGTGGTTTAACT+GGG | + | chr6_4:36755183-36755202 | Msa0987120:intron | 35.0% |
| TCATGTGTCCAAGAATTACT+AGG | + | chr6_4:36755647-36755666 | Msa0987120:intron | 35.0% | |
| CACACAATCCTAGTAATTCT+TGG | - | chr6_4:36755658-36755677 | None:intergenic | 35.0% | |
| GCATTGCAGTGAAAAGAAAA+TGG | + | chr6_4:36755783-36755802 | Msa0987120:intron | 35.0% | |
| ! | ATTCGTTTTCCAAGAAACCA+TGG | - | chr6_4:36755910-36755929 | None:intergenic | 35.0% |
| TTTCTTGGAAAACGAATTGC+TGG | + | chr6_4:36755913-36755932 | Msa0987120:CDS | 35.0% | |
| TAACAAACCAACCTTTGTCT+TGG | - | chr6_4:36755983-36756002 | None:intergenic | 35.0% | |
| ATCTCTTTCACTATTGTGTC+AGG | + | chr6_4:36756150-36756169 | Msa0987120:intron | 35.0% | |
| CTGTTGTAACTCTCTTTCTT+TGG | - | chr6_4:36756378-36756397 | None:intergenic | 35.0% | |
| CAAAGAAAGAGAGTTACAAC+AGG | + | chr6_4:36756376-36756395 | Msa0987120:intron | 35.0% | |
| ! | TGTGTAAAGAATTTTCGGTG+AGG | + | chr6_4:36756511-36756530 | Msa0987120:intron | 35.0% |
| CACTACACCTAATAATTAGG+AGG | - | chr6_4:36756995-36757014 | None:intergenic | 35.0% | |
| CTCCTAATTATTAGGTGTAG+TGG | + | chr6_4:36756993-36757012 | Msa0987120:intron | 35.0% | |
| CAAGAAAGAGAAGACACAAA+TGG | - | chr6_4:36757111-36757130 | None:intergenic | 35.0% | |
| GTTCAGTGAGATAATAAGAG+AGG | - | chr6_4:36757162-36757181 | None:intergenic | 35.0% | |
| AATCAAAAGTAGAGGAACGT+GGG | - | chr6_4:36757188-36757207 | None:intergenic | 35.0% | |
| AAATCAAAAGTAGAGGAACG+TGG | - | chr6_4:36757189-36757208 | None:intergenic | 35.0% | |
| CATAGGAAAATGAGAGTTAG+TGG | - | chr6_4:36757212-36757231 | None:intergenic | 35.0% | |
| AATCCAACAAAAGCAACCTA+GGG | - | chr6_4:36757315-36757334 | None:intergenic | 35.0% | |
| ! | ATCCTACAGATGAGTCTTAT+GGG | + | chr6_4:36757370-36757389 | Msa0987120:intron | 35.0% |
| AGAATAGAGCAGAGAGATAA+AGG | - | chr6_4:36757398-36757417 | None:intergenic | 35.0% | |
| TATCTCTCTGCTCTATTCTT+TGG | + | chr6_4:36757399-36757418 | Msa0987120:intron | 35.0% | |
| ATCTCTCTGCTCTATTCTTT+GGG | + | chr6_4:36757400-36757419 | Msa0987120:intron | 35.0% | |
| CAATAACAGAGTAAGGTACA+CGG | - | chr6_4:36757554-36757573 | None:intergenic | 35.0% | |
| TGTACCTTACTCTGTTATTG+AGG | + | chr6_4:36757554-36757573 | Msa0987120:intron | 35.0% | |
| CTGTTATTGAGGCTCTTATA+TGG | + | chr6_4:36757565-36757584 | Msa0987120:intron | 35.0% | |
| GCTGTTGTATATTACAGTGT+TGG | + | chr6_4:36757591-36757610 | Msa0987120:intron | 35.0% | |
| ! | ACTTTTTGTAGTGCACCAAA+TGG | + | chr6_4:36757734-36757753 | Msa0987120:intron | 35.0% |
| ! | CAAATGGCATTAGGTCTTTT+CGG | + | chr6_4:36757750-36757769 | Msa0987120:intron | 35.0% |
| ! | AAATGGCATTAGGTCTTTTC+GGG | + | chr6_4:36757751-36757770 | Msa0987120:intron | 35.0% |
| ATGGTTCTTGCCAATACATT+TGG | + | chr6_4:36757798-36757817 | Msa0987120:intron | 35.0% | |
| !! | ACTGCTGATTATTTTCTTGC+TGG | + | chr6_4:36757830-36757849 | Msa0987120:intron | 35.0% |
| !! | CTGCTGATTATTTTCTTGCT+GGG | + | chr6_4:36757831-36757850 | Msa0987120:intron | 35.0% |
| GGAGGATTTATTGTACCTAA+AGG | + | chr6_4:36757852-36757871 | Msa0987120:intron | 35.0% | |
| CAGCATTGCTGTAAGTTATT+TGG | + | chr6_4:36757911-36757930 | Msa0987120:intron | 35.0% | |
| ATGAATTTACTGCTTCCAGA+TGG | + | chr6_4:36758024-36758043 | Msa0987120:intron | 35.0% | |
| ACAAAAGACAATCAGGAGTA+AGG | - | chr6_4:36758164-36758183 | None:intergenic | 35.0% | |
| TTTATGCGTGGTCAAAACTT+AGG | + | chr6_4:36758186-36758205 | Msa0987120:intron | 35.0% | |
| TCAATGAAGTCTCCATAATC+AGG | - | chr6_4:36758285-36758304 | None:intergenic | 35.0% | |
| !! | ATCTACCAGTTGATGATTAC+TGG | + | chr6_4:36758475-36758494 | Msa0987120:intron | 35.0% |
| ACTTACCAGTAATCATCAAC+TGG | - | chr6_4:36758483-36758502 | None:intergenic | 35.0% | |
| CGAACTATAAGGAAGGAAAA+GGG | - | chr6_4:36758660-36758679 | None:intergenic | 35.0% | |
| ACGAACTATAAGGAAGGAAA+AGG | - | chr6_4:36758661-36758680 | None:intergenic | 35.0% | |
| TGTATGACGAACTATAAGGA+AGG | - | chr6_4:36758667-36758686 | None:intergenic | 35.0% | |
| ACATGTACGGAAAACTATTG+AGG | + | chr6_4:36758684-36758703 | Msa0987120:intron | 35.0% | |
| ATCATAGCATGACTGTCTAT+TGG | - | chr6_4:36758815-36758834 | None:intergenic | 35.0% | |
| TAGACAGTCATGCTATGATA+TGG | + | chr6_4:36758816-36758835 | Msa0987120:intron | 35.0% | |
| GATATTTGGCATATAGCACT+CGG | - | chr6_4:36758950-36758969 | None:intergenic | 35.0% | |
| TCATGAACAAAGGGGATATT+TGG | - | chr6_4:36758964-36758983 | None:intergenic | 35.0% | |
| ATGGCAATTCATGAACAAAG+GGG | - | chr6_4:36758972-36758991 | None:intergenic | 35.0% | |
| CTGAGTCTAAATATCTCTCT+GGG | + | chr6_4:36759103-36759122 | Msa0987120:CDS | 35.0% | |
| !! | GGTTTTTCAGTTAATGTACC+AGG | + | chr6_4:36759183-36759202 | Msa0987120:CDS | 35.0% |
| TGCAAAAGATGTCATGGATA+TGG | + | chr6_4:36759212-36759231 | Msa0987120:CDS | 35.0% | |
| !! | TGTCAAAGTATTGAGTGACA+AGG | - | chr6_4:36759239-36759258 | None:intergenic | 35.0% |
| CTTATGCAAATTGCTAAGGT+AGG | - | chr6_4:36759282-36759301 | None:intergenic | 35.0% | |
| ! | TGCTTATTACAGAGGGGTTT+TGG | + | chr6_4:36754822-36754841 | Msa0987120:CDS | 40.0% |
| CTCAGAAAGTTGTGATTGAC+TGG | + | chr6_4:36754845-36754864 | Msa0987120:CDS | 40.0% | |
| CAGAAAGTTGTGATTGACTG+GGG | + | chr6_4:36754847-36754866 | Msa0987120:CDS | 40.0% | |
| TCATCAACAAGCTTCGACAA+CGG | - | chr6_4:36754922-36754941 | None:intergenic | 40.0% | |
| TGAGAAGCTGAATTGTGAAG+TGG | + | chr6_4:36754948-36754967 | Msa0987120:CDS | 40.0% | |
| TGAATTGTGAAGTGGCGAAT+GGG | + | chr6_4:36754956-36754975 | Msa0987120:CDS | 40.0% | |
| ! | CTGATTCATGTCTTTGGTGT+TGG | + | chr6_4:36755097-36755116 | Msa0987120:CDS | 40.0% |
| ! | CATTGTTTGCTTGTTGCTGA+TGG | + | chr6_4:36755298-36755317 | Msa0987120:intron | 40.0% |
| ! | GTTGTTATTGTAGACTAGGG+AGG | + | chr6_4:36755330-36755349 | Msa0987120:intron | 40.0% |
| ! | TTGCTATTCAACGCACTTGT+CGG | + | chr6_4:36755386-36755405 | Msa0987120:intron | 40.0% |
| !! | GCAAGTTGATCAATCTCAAG+TGG | + | chr6_4:36755825-36755844 | Msa0987120:CDS | 40.0% |
| !! | ATTTGAAAAGGTGCTTCAGC+CGG | + | chr6_4:36755870-36755889 | Msa0987120:CDS | 40.0% |
| CAAATGTGAGACCAAGACAA+AGG | + | chr6_4:36755969-36755988 | Msa0987120:CDS | 40.0% | |
| CGTGGAATGACATGAAGATT+TGG | - | chr6_4:36756027-36756046 | None:intergenic | 40.0% | |
| AACAGAGGATGCATATACAG+GGG | - | chr6_4:36756245-36756264 | None:intergenic | 40.0% | |
| CAACAGAGGATGCATATACA+GGG | - | chr6_4:36756246-36756265 | None:intergenic | 40.0% | |
| CTGTATATGCATCCTCTGTT+GGG | + | chr6_4:36756245-36756264 | Msa0987120:intron | 40.0% | |
| TGTATATGCATCCTCTGTTG+GGG | + | chr6_4:36756246-36756265 | Msa0987120:intron | 40.0% | |
| !! | TAGTTGGTAACGAAATGACC+AGG | + | chr6_4:36756338-36756357 | Msa0987120:intron | 40.0% |
| !! | AGTTGGTAACGAAATGACCA+GGG | + | chr6_4:36756339-36756358 | Msa0987120:intron | 40.0% |
| TCTAATGTATGTCACTGTCC+CGG | + | chr6_4:36756442-36756461 | Msa0987120:intron | 40.0% | |
| ! | AAAGGGAAAGAAAGTGTACC+GGG | - | chr6_4:36756463-36756482 | None:intergenic | 40.0% |
| ! | GAAAGGGAAAGAAAGTGTAC+CGG | - | chr6_4:36756464-36756483 | None:intergenic | 40.0% |
| GGTACACTTTCTTTCCCTTT+CGG | + | chr6_4:36756463-36756482 | Msa0987120:intron | 40.0% | |
| ! | CTTTACGGCACACATCATTT+TGG | + | chr6_4:36756935-36756954 | Msa0987120:intron | 40.0% |
| TTAGGTGTAGTGGTTATGCT+TGG | + | chr6_4:36757003-36757022 | Msa0987120:intron | 40.0% | |
| AGACACAAATGGTCATGGAT+CGG | - | chr6_4:36757100-36757119 | None:intergenic | 40.0% | |
| AGAGAAGACACAAATGGTCA+TGG | - | chr6_4:36757105-36757124 | None:intergenic | 40.0% | |
| GTCATGAGAGTTAGTGACAT+AGG | - | chr6_4:36757229-36757248 | None:intergenic | 40.0% | |
| TATTTGATCATGTTGCCCCT+AGG | + | chr6_4:36757296-36757315 | Msa0987120:intron | 40.0% | |
| ATCCAACAAAAGCAACCTAG+GGG | - | chr6_4:36757314-36757333 | None:intergenic | 40.0% | |
| GAATCCAACAAAAGCAACCT+AGG | - | chr6_4:36757316-36757335 | None:intergenic | 40.0% | |
| GTACAATATTCCTGCGAACA+AGG | + | chr6_4:36757343-36757362 | Msa0987120:intron | 40.0% | |
| CATCCTACAGATGAGTCTTA+TGG | + | chr6_4:36757369-36757388 | Msa0987120:intron | 40.0% | |
| AGAGCCTCAATAACAGAGTA+AGG | - | chr6_4:36757561-36757580 | None:intergenic | 40.0% | |
| AAAGATACCTTCCTGCTACA+GGG | - | chr6_4:36757623-36757642 | None:intergenic | 40.0% | |
| TAAAGATACCTTCCTGCTAC+AGG | - | chr6_4:36757624-36757643 | None:intergenic | 40.0% | |
| CGAAAAGACCTAATGCCATT+TGG | - | chr6_4:36757752-36757771 | None:intergenic | 40.0% | |
| !! | ATTAGGTCTTTTCGGGATGA+TGG | + | chr6_4:36757758-36757777 | Msa0987120:intron | 40.0% |
| ! | CTGATTATTTTCTTGCTGGG+AGG | + | chr6_4:36757834-36757853 | Msa0987120:intron | 40.0% |
| TGTAATTGCACGTTGTCCAT+AGG | - | chr6_4:36758000-36758019 | None:intergenic | 40.0% | |
| TGGCAGAAAATCAAGCAGTT+AGG | - | chr6_4:36758073-36758092 | None:intergenic | 40.0% | |
| ! | TGTCTTTTGTGCTTTATGCG+TGG | + | chr6_4:36758174-36758193 | Msa0987120:intron | 40.0% |
| TGTCTGCAGAAATCAGCAAT+TGG | + | chr6_4:36758414-36758433 | Msa0987120:intron | 40.0% | |
| ! | GCAATTGGTAACAACACAGT+AGG | + | chr6_4:36758429-36758448 | Msa0987120:intron | 40.0% |
| ! | CTGGTAGATTGTTTGAAACG+AGG | - | chr6_4:36758464-36758483 | None:intergenic | 40.0% |
| AATGTTGTGGGGAAATCTCA+CGG | - | chr6_4:36758516-36758535 | None:intergenic | 40.0% | |
| ATTTATCTTACTCCCCAGAG+AGG | + | chr6_4:36758584-36758603 | Msa0987120:intron | 40.0% | |
| AAACACTTCTTGACCTCTCT+GGG | - | chr6_4:36758600-36758619 | None:intergenic | 40.0% | |
| TAAACACTTCTTGACCTCTC+TGG | - | chr6_4:36758601-36758620 | None:intergenic | 40.0% | |
| CTATAAGGAAGGAAAAGGGT+AGG | - | chr6_4:36758656-36758675 | None:intergenic | 40.0% | |
| GCTGAGTCTAAATATCTCTC+TGG | + | chr6_4:36759102-36759121 | Msa0987120:CDS | 40.0% | |
| TCTAAATATCTCTCTGGGCT+GGG | + | chr6_4:36759108-36759127 | Msa0987120:CDS | 40.0% | |
| AAAGTTGTGATTGACTGGGG+AGG | + | chr6_4:36754850-36754869 | Msa0987120:CDS | 45.0% | |
| CTGAATTGTGAAGTGGCGAA+TGG | + | chr6_4:36754955-36754974 | Msa0987120:CDS | 45.0% | |
| GAATTGTGAAGTGGCGAATG+GGG | + | chr6_4:36754957-36754976 | Msa0987120:CDS | 45.0% | |
| AATTGTGAAGTGGCGAATGG+GGG | + | chr6_4:36754958-36754977 | Msa0987120:CDS | 45.0% | |
| GGAAGGGGTTAATTCAGCTT+TGG | + | chr6_4:36754993-36755012 | Msa0987120:CDS | 45.0% | |
| !! | AAGAGTAGCGTGTTGTTTGC+TGG | + | chr6_4:36755018-36755037 | Msa0987120:CDS | 45.0% |
| !! | AGAGTAGCGTGTTGTTTGCT+GGG | + | chr6_4:36755019-36755038 | Msa0987120:CDS | 45.0% |
| !! | TTCATGTCTTTGGTGTTGGG+AGG | + | chr6_4:36755101-36755120 | Msa0987120:CDS | 45.0% |
| TTGTTGCCGAAATCTGTTCG+AGG | + | chr6_4:36755358-36755377 | Msa0987120:intron | 45.0% | |
| AGCTCTCCTCGAACAGATTT+CGG | - | chr6_4:36755367-36755386 | None:intergenic | 45.0% | |
| TCTCAAGTGGCTATGAGAGA+AGG | + | chr6_4:36755838-36755857 | Msa0987120:CDS | 45.0% | |
| ! | GTGGCTATGAGAGAAGGTTT+TGG | + | chr6_4:36755844-36755863 | Msa0987120:CDS | 45.0% |
| !! | TTTGAAAAGGTGCTTCAGCC+GGG | + | chr6_4:36755871-36755890 | Msa0987120:CDS | 45.0% |
| CAAGAAACCATGGCATGCAA+TGG | - | chr6_4:36755900-36755919 | None:intergenic | 45.0% | |
| CATTGCATGCCATGGTTTCT+TGG | + | chr6_4:36755898-36755917 | Msa0987120:CDS | 45.0% | |
| TTGCTGGTCATCTCACTCTT+CGG | + | chr6_4:36755929-36755948 | Msa0987120:CDS | 45.0% | |
| CACTCTTCGGCTACAACAAT+TGG | + | chr6_4:36755942-36755961 | Msa0987120:CDS | 45.0% | |
| TGTGAGACCAAGACAAAGGT+TGG | + | chr6_4:36755973-36755992 | Msa0987120:CDS | 45.0% | |
| ACAGAGGATGCATATACAGG+GGG | - | chr6_4:36756244-36756263 | None:intergenic | 45.0% | |
| CCAACAGAGGATGCATATAC+AGG | - | chr6_4:36756247-36756266 | None:intergenic | 45.0% | |
| CCTGTATATGCATCCTCTGT+TGG | + | chr6_4:36756244-36756263 | Msa0987120:intron | 45.0% | |
| GTATATGCATCCTCTGTTGG+GGG | + | chr6_4:36756247-36756266 | Msa0987120:intron | 45.0% | |
| !! | GTTGGTAACGAAATGACCAG+GGG | + | chr6_4:36756340-36756359 | Msa0987120:intron | 45.0% |
| CTCCCATAAGACTCATCTGT+AGG | - | chr6_4:36757375-36757394 | None:intergenic | 45.0% | |
| AGCTTCCTCTGATGATATCG+CGG | + | chr6_4:36757454-36757473 | Msa0987120:intron | 45.0% | |
| TATTCTATCCTGCATGGGCA+TGG | + | chr6_4:36757508-36757527 | Msa0987120:intron | 45.0% | |
| AAGATACCTTCCTGCTACAG+GGG | - | chr6_4:36757622-36757641 | None:intergenic | 45.0% | |
| GTAGTGCACCAAATGGCATT+AGG | + | chr6_4:36757741-36757760 | Msa0987120:intron | 45.0% | |
| ! | GGATGATGGCTTCTATTGCA+CGG | + | chr6_4:36757772-36757791 | Msa0987120:intron | 45.0% |
| ! | GATGATGGCTTCTATTGCAC+GGG | + | chr6_4:36757773-36757792 | Msa0987120:intron | 45.0% |
| TGCAGCTGAGCCAAATGTAT+TGG | - | chr6_4:36757811-36757830 | None:intergenic | 45.0% | |
| GTGGATCTGTGCTTACCTTT+AGG | - | chr6_4:36757870-36757889 | None:intergenic | 45.0% | |
| CACGGCTTGATCATTTCTGA+AGG | - | chr6_4:36757945-36757964 | None:intergenic | 45.0% | |
| CTTCAGAAATGATCAAGCCG+TGG | + | chr6_4:36757943-36757962 | Msa0987120:intron | 45.0% | |
| TGCACGTTGTCCATAGGTAA+GGG | - | chr6_4:36757994-36758013 | None:intergenic | 45.0% | |
| TTGCACGTTGTCCATAGGTA+AGG | - | chr6_4:36757995-36758014 | None:intergenic | 45.0% | |
| TACTGCTTCCAGATGGATGA+AGG | + | chr6_4:36758031-36758050 | Msa0987120:intron | 45.0% | |
| AACACTTCTTGACCTCTCTG+GGG | - | chr6_4:36758599-36758618 | None:intergenic | 45.0% | |
| TAGCACTCGGTAGAGAAACA+TGG | - | chr6_4:36758937-36758956 | None:intergenic | 45.0% | |
| TGTGATCAGCTGCAAGATTG+AGG | + | chr6_4:36759016-36759035 | Msa0987120:intron | 45.0% | |
| GTGATCAGCTGCAAGATTGA+GGG | + | chr6_4:36759017-36759036 | Msa0987120:intron | 45.0% | |
| TTGCAAATTAAGCGAGCCGA+GGG | + | chr6_4:36759075-36759094 | Msa0987120:CDS | 45.0% | |
| GTCTAAATATCTCTCTGGGC+TGG | + | chr6_4:36759107-36759126 | Msa0987120:CDS | 45.0% | |
| GTCTCTCAAACCATCCACAA+TGG | - | chr6_4:36759154-36759173 | None:intergenic | 45.0% | |
| GGTTTGAGAGACAGTGTGAT+TGG | + | chr6_4:36759162-36759181 | Msa0987120:CDS | 45.0% | |
| GACGACTGCAAAAGATGTCA+TGG | + | chr6_4:36759206-36759225 | Msa0987120:CDS | 45.0% | |
| !!! | TTATATTATTAAATTAGTTT+TGG | + | chr6_4:36756855-36756874 | Msa0987120:intron | 5.0% |
| TTCGAGAAACGTGGTGGTTG+CGG | + | chr6_4:36754873-36754892 | Msa0987120:CDS | 50.0% | |
| ATTGTGAAGTGGCGAATGGG+GGG | + | chr6_4:36754959-36754978 | Msa0987120:CDS | 50.0% | |
| !! | GTGCTTTTTACCCCCAACAG+AGG | - | chr6_4:36756260-36756279 | None:intergenic | 50.0% |
| AACTCTCTTTCTTTGGCCCC+CGG | - | chr6_4:36756371-36756390 | None:intergenic | 50.0% | |
| !!! | TGCCCCTAGGTTGCTTTTGT+TGG | + | chr6_4:36757309-36757328 | Msa0987120:intron | 50.0% |
| TAGGATGCAACCTTGTTCGC+AGG | - | chr6_4:36757356-36757375 | None:intergenic | 50.0% | |
| GTAAAAGACCATGCCCATGC+AGG | - | chr6_4:36757519-36757538 | None:intergenic | 50.0% | |
| ! | GGGCATGGTCTTTTACCAGT+TGG | + | chr6_4:36757523-36757542 | Msa0987120:intron | 50.0% |
| AGGTACACGGAGAATCCAAC+TGG | - | chr6_4:36757541-36757560 | None:intergenic | 50.0% | |
| GGCTTCTATTGCACGGGATA+TGG | + | chr6_4:36757779-36757798 | Msa0987120:intron | 50.0% | |
| CAGAAATGATCAAGCCGTGG+TGG | + | chr6_4:36757946-36757965 | Msa0987120:intron | 50.0% | |
| !! | TGATCAAGCCGTGGTGGATA+TGG | + | chr6_4:36757952-36757971 | Msa0987120:intron | 50.0% |
| !! | GATCAAGCCGTGGTGGATAT+GGG | + | chr6_4:36757953-36757972 | Msa0987120:intron | 50.0% |
| !! | ATCAAGCCGTGGTGGATATG+GGG | + | chr6_4:36757954-36757973 | Msa0987120:intron | 50.0% |
| TGGTTGTCACCCCTTACCTA+TGG | + | chr6_4:36757981-36758000 | Msa0987120:intron | 50.0% | |
| GCACGTTGTCCATAGGTAAG+GGG | - | chr6_4:36757993-36758012 | None:intergenic | 50.0% | |
| ATCAGCTGCAAGATTGAGGG+TGG | + | chr6_4:36759020-36759039 | Msa0987120:intron | 50.0% | |
| CTTGCAAATTAAGCGAGCCG+AGG | + | chr6_4:36759074-36759093 | Msa0987120:CDS | 50.0% | |
| TTTAGACTCAGCCTCACCCT+CGG | - | chr6_4:36759094-36759113 | None:intergenic | 50.0% | |
| ! | ACATCTTTTGCAGTCGTCCC+TGG | - | chr6_4:36759204-36759223 | None:intergenic | 50.0% |
| GAATGGGGGGATTGTGTTGG+CGG | + | chr6_4:36754972-36754991 | Msa0987120:CDS | 55.0% | |
| GCTGGGCAGAGGATGATGTA+CGG | + | chr6_4:36755036-36755055 | Msa0987120:CDS | 55.0% | |
| CATGGCATGCAATGGCATCC+CGG | - | chr6_4:36755892-36755911 | None:intergenic | 55.0% | |
| GAAATGACCAGGGGAGTCTC+CGG | + | chr6_4:36756349-36756368 | Msa0987120:intron | 55.0% | |
| AAATGACCAGGGGAGTCTCC+GGG | + | chr6_4:36756350-36756369 | Msa0987120:intron | 55.0% | |
| GTTGGATTTGCCCCTGTAGC+AGG | + | chr6_4:36757609-36757628 | Msa0987120:intron | 55.0% | |
| GATTTGCCCCTGTAGCAGGA+AGG | + | chr6_4:36757613-36757632 | Msa0987120:intron | 55.0% | |
| CAGTAGCCCCATATCCACCA+CGG | - | chr6_4:36757963-36757982 | None:intergenic | 55.0% | |
| AATTAAGCGAGCCGAGGGTG+AGG | + | chr6_4:36759080-36759099 | Msa0987120:CDS | 55.0% | |
| CATCCACAATGGCTTGACGC+TGG | - | chr6_4:36759143-36759162 | None:intergenic | 55.0% | |
| CAGCGTCAAGCCATTGTGGA+TGG | + | chr6_4:36759141-36759160 | Msa0987120:CDS | 55.0% | |
| CTGGGGAGGTTCGAGAAACG+TGG | + | chr6_4:36754864-36754883 | Msa0987120:CDS | 60.0% | |
| GGGAGGTTCGAGAAACGTGG+TGG | + | chr6_4:36754867-36754886 | Msa0987120:CDS | 60.0% | |
| GGCGAATGGGGGGATTGTGT+TGG | + | chr6_4:36754969-36754988 | Msa0987120:CDS | 60.0% | |
| ! | GGGGGATTGTGTTGGCGGAA+GGG | + | chr6_4:36754977-36754996 | Msa0987120:CDS | 60.0% |
| ! | GGGGATTGTGTTGGCGGAAG+GGG | + | chr6_4:36754978-36754997 | Msa0987120:CDS | 60.0% |
| !! | GCGTGTTGTTTGCTGGGCAG+AGG | + | chr6_4:36755025-36755044 | Msa0987120:CDS | 60.0% |
| CGGGATGCCATTGCATGCCA+TGG | + | chr6_4:36755890-36755909 | Msa0987120:CDS | 60.0% | |
| AATGACCAGGGGAGTCTCCG+GGG | + | chr6_4:36756351-36756370 | Msa0987120:intron | 60.0% | |
| GGGAGCCGCGATATCATCAG+AGG | - | chr6_4:36757462-36757481 | None:intergenic | 60.0% | |
| !! | CGTGGTGGATATGGGGCTAC+TGG | + | chr6_4:36757961-36757980 | Msa0987120:intron | 60.0% |
| GAGGGTGGCAGCGAATGAGA+AGG | + | chr6_4:36759035-36759054 | Msa0987120:CDS | 60.0% | |
| TCGCCAGCGTCAAGCCATTG+TGG | + | chr6_4:36759137-36759156 | Msa0987120:CDS | 60.0% | |
| ! | CGTGGTGGTTGCGGCGTTGA+TGG | + | chr6_4:36754882-36754901 | Msa0987120:CDS | 65.0% |
| !! | GGTGGTTGCGGCGTTGATGG+AGG | + | chr6_4:36754885-36754904 | Msa0987120:CDS | 65.0% |
| ! | GGGGGGATTGTGTTGGCGGA+AGG | + | chr6_4:36754976-36754995 | Msa0987120:CDS | 65.0% |
| ATGACCAGGGGAGTCTCCGG+GGG | + | chr6_4:36756352-36756371 | Msa0987120:intron | 65.0% | |
| TTGGCCCCCGGAGACTCCCC+TGG | - | chr6_4:36756359-36756378 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_4 | gene | 36754817 | 36759308 | 36754817 | ID=Msa0987120;Name=Msa0987120 |
| chr6_4 | mRNA | 36754817 | 36759308 | 36754817 | ID=Msa0987120-mRNA-1;Parent=Msa0987120;Name=Msa0987120-mRNA-1;_AED=0.28;_eAED=0.28;_QI=0|0|0|0.66|1|1|3|0|266 |
| chr6_4 | exon | 36754817 | 36755122 | 36754817 | ID=Msa0987120-mRNA-1:exon:9234;Parent=Msa0987120-mRNA-1 |
| chr6_4 | exon | 36755784 | 36755994 | 36755784 | ID=Msa0987120-mRNA-1:exon:9235;Parent=Msa0987120-mRNA-1 |
| chr6_4 | exon | 36759025 | 36759308 | 36759025 | ID=Msa0987120-mRNA-1:exon:9236;Parent=Msa0987120-mRNA-1 |
| chr6_4 | CDS | 36754817 | 36755122 | 36754817 | ID=Msa0987120-mRNA-1:cds;Parent=Msa0987120-mRNA-1 |
| chr6_4 | CDS | 36755784 | 36755994 | 36755784 | ID=Msa0987120-mRNA-1:cds;Parent=Msa0987120-mRNA-1 |
| chr6_4 | CDS | 36759025 | 36759308 | 36759025 | ID=Msa0987120-mRNA-1:cds;Parent=Msa0987120-mRNA-1 |
| Gene Sequence |
| Protein sequence |
