AlfalfaGEDB | Msa0989380

M. sativa cultivar zhongmu-4 / Msa0989380

KEGG: K07976
GO: GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005886 GO:0012505 GO:0016020 GO:0031410 GO:0031982 GO:0043226 GO:0043227 GO:0043229 GO:0044424 GO:0044444 GO:0044464 GO:0071944 GO:0097708
PFAM: PF00071.25

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0989380	XP_013452903.1	98.131	214	4	0	1	214	1	214	1.16e-154	437

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0989380	sp\|Q9C9U7\|RAA6A_ARATH	64.192	229	66	3	3	215	4	232	2.77e-102	298

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0989380	A0A072UBW2	98.131	214	4	0	1	214	1	214	5.56e-155	437

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0721280	Msa0989380	0.818566	1.833742e-52	-8.615850e-47
Msa0811130	Msa0989380	0.800294	1.541944e-48	-8.615850e-47
Msa0989380	Msa1063420	0.805582	1.245213e-49	-8.615850e-47
Msa0989380	Msa1357890	0.815254	1.015624e-51	-8.615850e-47
Msa0989380	Msa1398090	0.815851	7.479539e-52	-8.615850e-47
Msa0538910	Msa0989380	0.800050	1.728373e-48	-8.615850e-47
Msa0897200	Msa0989380	0.835483	1.634633e-56	-8.615850e-47
Msa0962840	Msa0989380	0.830672	2.573473e-55	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0989380	MtrunA17_Chr6g0482721	98.131	214	4	0	1	214	1	214	1.07e-158	437
Msa0989380	MtrunA17_Chr8g0392931	76.777	211	48	1	5	214	7	217	1.23e-111	318
Msa0989380	MtrunA17_Chr4g0040781	58.294	211	84	2	6	214	7	215	5.50e-88	258
Msa0989380	MtrunA17_Chr2g0283131	57.820	211	85	2	6	214	7	215	2.93e-87	256
Msa0989380	MtrunA17_Chr4g0046261	57.820	211	85	2	6	214	7	215	5.35e-87	256
Msa0989380	MtrunA17_Chr2g0325091	58.571	210	84	3	6	214	5	212	2.34e-86	254
Msa0989380	MtrunA17_Chr2g0315551	57.416	209	89	0	6	214	7	215	1.69e-85	252
Msa0989380	MtrunA17_Chr3g0112681	52.336	214	102	0	1	214	1	214	2.14e-80	239
Msa0989380	MtrunA17_Chr4g0032201	53.953	215	96	3	1	214	1	213	7.21e-80	238
Msa0989380	MtrunA17_Chr2g0319951	55.238	210	93	1	6	214	7	216	3.79e-79	236
Msa0989380	MtrunA17_Chr2g0276941	54.286	210	95	1	6	214	9	218	4.38e-78	233
Msa0989380	MtrunA17_Chr8g0381841	53.023	215	93	4	6	214	11	223	5.40e-75	226
Msa0989380	MtrunA17_Chr3g0123821	50.943	212	101	1	6	214	10	221	2.90e-74	224
Msa0989380	MtrunA17_Chr7g0231131	49.302	215	105	2	5	216	8	221	3.69e-71	216
Msa0989380	MtrunA17_Chr1g0174281	48.837	215	105	2	5	214	8	222	7.82e-71	215
Msa0989380	MtrunA17_Chr8g0346421	49.074	216	100	2	5	214	19	230	9.42e-70	213
Msa0989380	MtrunA17_Chr7g0275991	49.074	216	98	2	7	214	15	226	2.07e-69	211
Msa0989380	MtrunA17_Chr1g0189361	53.807	197	89	1	10	204	12	208	3.36e-68	208
Msa0989380	MtrunA17_Chr8g0351861	49.550	222	96	4	7	216	11	228	1.96e-65	201
Msa0989380	MtrunA17_Chr7g0214241	56.395	172	75	0	11	182	14	185	4.15e-65	200
Msa0989380	MtrunA17_Chr7g0234201	54.974	191	81	1	11	196	12	202	5.19e-65	200
Msa0989380	MtrunA17_Chr6g0458081	54.878	164	74	0	10	173	4	167	1.27e-57	181
Msa0989380	MtrunA17_Chr2g0290891	53.293	167	78	0	11	177	5	171	7.58e-56	176
Msa0989380	MtrunA17_Chr8g0349711	51.829	164	79	0	11	174	5	168	1.33e-54	173
Msa0989380	MtrunA17_Chr2g0276931	43.902	205	106	1	10	214	7	202	2.47e-54	172
Msa0989380	MtrunA17_Chr4g0055651	48.387	186	94	2	5	189	1	185	4.81e-54	171
Msa0989380	MtrunA17_Chr7g0250531	48.295	176	91	0	5	180	1	176	1.87e-53	170
Msa0989380	MtrunA17_Chr8g0335471	48.295	176	91	0	5	180	1	176	5.42e-53	169
Msa0989380	MtrunA17_Chr8g0349681	53.293	167	78	0	11	177	383	549	3.55e-52	177
Msa0989380	MtrunA17_Chr8g0349681	45.652	184	98	1	11	192	174	357	2.32e-48	166
Msa0989380	MtrunA17_Chr8g0349681	50.314	159	79	0	11	169	12	170	1.32e-46	162
Msa0989380	MtrunA17_Chr1g0182321	41.262	206	116	2	10	214	13	214	2.19e-50	162
Msa0989380	MtrunA17_Chr1g0182301	40.777	206	117	2	10	214	13	214	7.15e-50	161
Msa0989380	MtrunA17_Chr8g0384311	47.849	186	92	4	7	190	8	190	1.02e-49	160
Msa0989380	MtrunA17_Chr1g0159481	48.634	183	89	4	10	190	15	194	9.46e-49	158
Msa0989380	MtrunA17_Chr1g0212521	40.952	210	111	4	10	214	13	214	9.67e-49	158
Msa0989380	MtrunA17_Chr7g0263071	43.316	187	105	1	10	195	13	199	1.22e-48	158
Msa0989380	MtrunA17_Chr4g0030911	47.879	165	85	1	10	173	13	177	2.75e-48	157
Msa0989380	MtrunA17_Chr3g0109721	46.875	160	85	0	14	173	12	171	3.95e-47	154
Msa0989380	MtrunA17_Chr5g0433561	46.250	160	86	0	14	173	12	171	8.82e-47	153
Msa0989380	MtrunA17_Chr3g0130271	46.961	181	92	4	1	178	1	180	5.42e-46	151
Msa0989380	MtrunA17_Chr7g0265001	44.444	207	106	4	10	214	14	213	7.60e-45	148
Msa0989380	MtrunA17_Chr2g0327911	44.118	170	93	2	6	173	9	178	2.92e-44	147
Msa0989380	MtrunA17_Chr1g0180291	43.478	207	107	5	10	214	12	210	6.55e-43	143
Msa0989380	MtrunA17_Chr1g0197331	46.927	179	89	4	10	185	13	188	9.73e-43	143
Msa0989380	MtrunA17_Chr8g0390561	39.429	175	106	0	14	188	11	185	1.65e-42	142
Msa0989380	MtrunA17_Chr1g0199331	44.099	161	89	1	14	173	33	193	2.83e-42	141
Msa0989380	MtrunA17_Chr3g0123971	37.931	174	108	0	13	186	10	183	8.20e-42	140
Msa0989380	MtrunA17_Chr8g0382221	39.752	161	97	0	13	173	10	170	2.86e-41	139
Msa0989380	MtrunA17_Chr5g0400131	41.558	154	90	0	13	166	10	163	6.69e-40	135
Msa0989380	MtrunA17_Chr4g0055081	40.260	154	92	0	13	166	10	163	1.41e-39	135
Msa0989380	MtrunA17_Chr8g0383261	41.104	163	89	4	12	167	12	174	5.61e-33	118
Msa0989380	MtrunA17_Chr2g0331691	38.690	168	95	4	12	172	10	176	5.61e-33	118
Msa0989380	MtrunA17_Chr6g0466301	37.576	165	96	3	12	169	8	172	1.20e-32	117
Msa0989380	MtrunA17_Chr6g0465491	37.576	165	96	3	12	169	8	172	1.20e-32	117
Msa0989380	MtrunA17_Chr4g0034871	37.037	162	95	3	12	166	8	169	1.33e-32	117
Msa0989380	MtrunA17_Chr1g0201121	37.423	163	95	3	12	167	8	170	5.44e-31	112
Msa0989380	MtrunA17_Chr4g0004661	37.037	162	95	3	12	166	64	225	7.60e-31	114
Msa0989380	MtrunA17_Chr3g0138121	33.908	174	111	4	1	173	1	171	3.92e-24	95.5
Msa0989380	MtrunA17_Chr3g0138101	33.908	174	111	4	1	173	1	171	4.00e-24	95.5
Msa0989380	MtrunA17_Chr3g0138111	33.908	174	111	4	1	173	1	171	4.40e-24	95.1
Msa0989380	MtrunA17_Chr6g0466161	36.486	148	87	3	27	167	5	152	1.38e-23	93.6
Msa0989380	MtrunA17_Chr6g0465471	36.486	148	87	3	27	167	5	152	1.58e-23	93.6
Msa0989380	MtrunA17_Chr6g0486041	27.979	193	125	5	12	192	6	196	2.69e-17	77.0
Msa0989380	MtrunA17_Chr6g0466431	37.624	101	54	1	12	112	8	99	1.07e-16	72.8
Msa0989380	MtrunA17_Chr6g0465611	37.624	101	54	1	12	112	8	99	1.07e-16	72.8
Msa0989380	MtrunA17_Chr2g0325101	33.871	124	79	3	12	134	6	127	1.59e-16	74.7
Msa0989380	MtrunA17_Chr4g0046211	33.065	124	80	3	12	134	6	127	1.86e-16	73.2
Msa0989380	MtrunA17_Chr2g0331841	56.897	58	25	0	81	138	2	59	2.08e-16	71.6
Msa0989380	MtrunA17_Chr3g0117931	28.079	203	128	7	12	199	8	207	2.62e-16	74.3
Msa0989380	MtrunA17_Chr4g0037021	32.000	150	92	4	12	160	6	146	3.17e-16	73.9
Msa0989380	MtrunA17_Chr5g0405791	33.065	124	80	3	12	134	6	127	4.33e-16	73.6
Msa0989380	MtrunA17_Chr8g0371501	29.697	165	103	5	12	172	6	161	8.29e-16	72.8
Msa0989380	MtrunA17_Chr1g0178291	34.395	157	93	5	17	170	433	582	8.55e-14	69.7

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0989380	AT1G73640.1	64.192	229	66	3	3	215	4	232	2.82e-103	298
Msa0989380	AT1G18200.1	64.000	225	69	3	3	215	4	228	7.67e-103	296
Msa0989380	AT5G60860.1	57.346	211	86	2	6	214	7	215	2.17e-87	257
Msa0989380	AT1G16920.1	58.049	205	85	1	10	214	11	214	1.12e-85	253
Msa0989380	AT5G45750.1	57.416	209	88	1	6	214	7	214	2.27e-84	249
Msa0989380	AT4G18430.1	56.872	211	87	2	6	214	7	215	3.12e-84	249
Msa0989380	AT2G33870.1	56.398	211	89	2	6	214	7	216	8.07e-84	248
Msa0989380	AT3G15060.1	56.398	211	88	2	6	214	7	215	1.11e-83	248
Msa0989380	AT1G28550.1	56.522	207	87	2	10	214	11	216	1.74e-83	247
Msa0989380	AT1G09630.1	53.271	214	100	0	1	214	1	214	2.61e-82	244
Msa0989380	AT1G06400.1	57.143	210	87	2	6	214	7	214	3.91e-82	244
Msa0989380	AT4G18800.1	55.981	209	89	1	6	214	7	212	6.41e-81	241
Msa0989380	AT1G07410.1	53.738	214	97	2	1	214	1	212	2.44e-79	236
Msa0989380	AT5G47960.1	53.052	213	97	1	5	214	8	220	3.32e-76	229
Msa0989380	AT4G39990.1	52.381	210	96	2	8	214	13	221	2.86e-74	224
Msa0989380	AT3G46830.1	52.093	215	102	1	1	214	1	215	6.56e-74	223
Msa0989380	AT3G46830.2	52.093	215	102	1	1	214	1	215	6.56e-74	223
Msa0989380	AT5G65270.1	52.804	214	94	3	7	214	12	224	1.27e-73	223
Msa0989380	AT3G12160.1	51.643	213	99	2	5	214	8	219	4.93e-73	221
Msa0989380	AT5G59150.1	51.852	216	101	3	1	214	1	215	6.86e-73	220
Msa0989380	AT5G47520.1	53.774	212	95	2	6	214	8	219	1.53e-70	214
Msa0989380	AT2G31680.1	50.725	207	100	1	10	214	10	216	2.23e-66	204
Msa0989380	AT2G43130.1	49.533	214	106	1	1	214	1	212	1.80e-65	201
Msa0989380	AT1G01200.1	47.032	219	104	4	4	213	20	235	7.92e-65	201
Msa0989380	AT3G07410.1	50.971	206	100	1	10	214	10	215	2.08e-64	199
Msa0989380	AT1G05810.1	50.000	208	99	2	10	214	10	215	2.37e-64	199
Msa0989380	AT1G05810.2	50.000	208	99	2	10	214	56	261	7.85e-64	199
Msa0989380	AT4G35860.1	46.860	207	108	1	10	214	4	210	1.26e-58	184
Msa0989380	AT4G17170.1	53.293	167	78	0	11	177	5	171	5.22e-56	177
Msa0989380	AT4G17160.1	46.341	205	104	2	11	214	5	204	2.24e-55	175
Msa0989380	AT1G02130.1	47.458	177	93	0	5	181	1	177	2.42e-53	170
Msa0989380	AT5G47200.1	43.602	211	107	4	5	214	1	200	4.96e-53	169
Msa0989380	AT4G17530.1	43.602	211	107	4	5	214	1	200	6.23e-53	169
Msa0989380	AT3G11730.1	45.550	191	104	0	10	200	6	196	1.51e-52	168
Msa0989380	AT5G03520.1	42.788	208	114	2	10	216	13	216	4.23e-50	162
Msa0989380	AT3G53610.2	41.429	210	110	3	10	214	13	214	2.37e-49	160
Msa0989380	AT3G53610.3	41.429	210	110	3	10	214	13	214	2.37e-49	160
Msa0989380	AT3G53610.1	41.429	210	110	3	10	214	13	214	2.37e-49	160
Msa0989380	AT5G59840.1	41.748	206	115	2	10	214	13	214	3.15e-49	160
Msa0989380	AT1G43890.3	50.292	171	82	3	10	178	11	180	1.07e-48	159
Msa0989380	AT1G43890.1	50.292	171	82	3	10	178	11	180	1.07e-48	159
Msa0989380	AT1G43890.2	50.292	171	82	3	10	178	11	180	1.07e-48	159
Msa0989380	AT3G46060.2	41.748	206	115	2	10	214	13	214	2.34e-48	158
Msa0989380	AT3G46060.3	41.748	206	115	2	10	214	13	214	2.34e-48	158
Msa0989380	AT3G46060.1	41.748	206	115	2	10	214	13	214	2.34e-48	158
Msa0989380	AT5G45130.1	42.935	184	99	1	14	197	12	189	6.44e-48	156
Msa0989380	AT3G09900.1	41.346	208	119	2	10	216	13	218	1.61e-47	155
Msa0989380	AT5G59150.2	49.080	163	80	3	54	214	3	164	1.65e-47	154
Msa0989380	AT5G45130.2	42.857	182	98	1	16	197	22	197	4.33e-47	154
Msa0989380	AT4G19640.1	41.209	182	101	1	14	195	12	187	3.19e-46	152
Msa0989380	AT5G03530.2	43.961	207	106	5	10	214	11	209	2.91e-44	147
Msa0989380	AT5G03530.1	43.961	207	106	5	10	214	11	209	2.91e-44	147
Msa0989380	AT4G39890.1	40.476	168	99	1	13	179	10	177	1.99e-43	145
Msa0989380	AT4G35860.2	44.785	163	88	1	54	214	2	164	7.75e-42	139
Msa0989380	AT3G54840.1	45.860	157	84	1	14	169	35	191	1.16e-41	140
Msa0989380	AT3G54840.3	45.806	155	83	1	16	169	3	157	1.25e-41	139
Msa0989380	AT3G54840.2	46.104	154	82	1	14	166	35	188	1.67e-41	139
Msa0989380	AT2G22290.1	38.922	167	102	0	13	179	10	176	1.04e-40	138
Msa0989380	AT5G10260.1	41.558	154	90	0	13	166	10	163	4.16e-40	136
Msa0989380	AT3G09910.3	46.199	171	89	3	10	178	11	180	1.30e-38	132
Msa0989380	AT3G09910.1	46.199	171	89	3	10	178	11	180	1.30e-38	132
Msa0989380	AT3G09910.2	46.199	171	89	3	10	178	11	180	1.30e-38	132
Msa0989380	AT2G44610.1	40.260	154	92	0	13	166	10	163	2.77e-38	132
Msa0989380	AT5G64990.1	38.889	162	99	0	13	174	8	169	3.40e-38	131
Msa0989380	AT3G09910.5	46.108	167	87	3	10	174	11	176	1.49e-37	129
Msa0989380	AT3G09910.4	46.108	167	87	3	10	174	11	176	1.49e-37	129
Msa0989380	AT4G19640.3	38.122	181	104	2	14	187	12	191	5.18e-37	128
Msa0989380	AT5G03520.2	38.857	175	102	2	43	216	36	206	5.25e-37	128
Msa0989380	AT4G19640.2	46.032	126	68	0	14	139	12	137	2.47e-36	125
Msa0989380	AT5G64990.2	37.278	169	99	1	13	174	8	176	2.09e-35	124
Msa0989380	AT1G22740.1	39.645	169	94	5	12	173	8	175	5.15e-34	120
Msa0989380	AT1G52280.1	38.095	168	96	4	12	172	8	174	5.60e-33	118
Msa0989380	AT3G18820.1	37.654	162	94	3	12	166	8	169	3.85e-32	116
Msa0989380	AT4G09720.1	36.970	165	97	4	12	169	8	172	7.99e-32	115
Msa0989380	AT1G49300.2	33.333	204	120	5	12	208	8	202	9.38e-32	115
Msa0989380	AT1G49300.1	33.333	204	120	5	12	208	8	202	9.38e-32	115
Msa0989380	AT4G09720.4	36.471	170	96	4	12	169	8	177	3.49e-31	114
Msa0989380	AT2G21880.1	35.758	165	99	3	12	169	9	173	9.58e-31	112
Msa0989380	AT3G16100.1	36.905	168	98	4	12	172	8	174	1.65e-30	112
Msa0989380	AT5G39620.1	37.725	167	97	3	13	172	6	172	4.20e-30	110
Msa0989380	AT4G09720.3	35.227	176	96	4	12	169	8	183	4.30e-30	111
Msa0989380	AT5G46025.1	47.170	106	55	1	74	178	6	111	5.79e-28	102
Msa0989380	AT5G55080.1	31.677	161	107	3	13	173	14	171	8.10e-25	97.8
Msa0989380	AT5G20020.1	33.908	174	111	4	1	173	1	171	5.35e-24	95.5
Msa0989380	AT5G55190.1	33.908	174	111	4	1	173	1	171	5.89e-24	95.5
Msa0989380	AT5G20010.1	33.908	174	111	4	1	173	1	171	5.89e-24	95.5
Msa0989380	AT2G21880.4	33.108	148	92	3	29	169	1	148	1.84e-22	90.5
Msa0989380	AT2G21880.3	33.108	148	92	3	29	169	1	148	1.84e-22	90.5
Msa0989380	AT4G09720.6	37.037	135	78	4	42	169	4	138	2.68e-22	89.7
Msa0989380	AT4G09720.5	37.037	135	78	4	42	169	4	138	2.68e-22	89.7
Msa0989380	AT4G09720.2	37.037	135	78	4	42	169	4	138	2.68e-22	89.7
Msa0989380	AT2G44690.1	31.443	194	115	6	12	193	18	205	3.00e-21	87.8
Msa0989380	AT2G21880.2	30.909	165	99	4	12	169	9	165	5.52e-21	87.0
Msa0989380	AT4G35020.1	32.121	165	99	5	12	172	6	161	2.08e-17	77.4
Msa0989380	AT4G35020.2	32.121	165	99	5	12	172	6	161	2.08e-17	77.4
Msa0989380	AT4G35020.3	32.121	165	99	5	12	172	6	161	2.08e-17	77.4
Msa0989380	AT4G28950.1	34.454	119	75	3	12	129	6	122	2.90e-16	74.7
Msa0989380	AT5G45970.1	32.558	129	84	3	12	139	6	132	1.21e-15	72.8
Msa0989380	AT1G20090.1	33.871	124	79	3	12	134	5	126	1.29e-15	72.8
Msa0989380	AT5G62880.2	28.902	173	110	5	14	182	10	173	1.70e-15	72.0
Msa0989380	AT1G75840.1	33.065	124	80	3	12	134	6	127	2.22e-15	72.0
Msa0989380	AT2G17800.2	28.571	168	107	5	12	175	6	164	2.78e-15	71.6
Msa0989380	AT2G17800.1	28.571	168	107	5	12	175	6	164	2.78e-15	71.6
Msa0989380	AT3G48040.2	33.065	124	80	3	12	134	8	129	2.99e-15	71.2
Msa0989380	AT3G48040.1	30.667	150	94	4	12	160	8	148	3.40e-15	71.6
Msa0989380	AT3G51300.1	32.787	122	79	3	14	134	8	127	3.82e-15	71.2
Msa0989380	AT4G35950.1	32.258	124	81	3	12	134	6	127	4.19e-15	71.2
Msa0989380	AT5G62880.1	30.345	145	91	4	12	155	8	143	7.12e-15	70.9
Msa0989380	AT4G35020.4	35.965	114	70	3	14	126	8	119	4.67e-14	67.4
Msa0989380	AT4G35020.5	35.965	114	70	3	14	126	8	119	4.67e-14	67.4

Find 50 sgRNAs with CRISPR-Local

Find 205 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CCCTATTAGTCTTCTTTCTT+TGG	0.161039	6_4:-46043684	Msa0989380:five_prime_UTR
TCTTCTTTCTTTGGAATTAA+AGG	0.161579	6_4:-46043675	Msa0989380:five_prime_UTR
TTACATGAGCTTAGAGAATT+TGG	0.172347	6_4:-46040217	Msa0989380:CDS
CTCTTCAAAACTGTCCTAAT+TGG	0.221934	6_4:-46043544	Msa0989380:CDS
AGCTCATCAAAGCACAAATA+TGG	0.246432	6_4:-46043402	Msa0989380:CDS
AAAATGAATGGGACAAAATT+AGG	0.248904	6_4:-46039983	Msa0989380:CDS
TCCAAAGAAAGAAGACTAAT+AGG	0.264491	6_4:+46043683	None:intergenic
ACTGTCCTAATTGGAGATTC+TGG	0.274153	6_4:-46043535	Msa0989380:CDS
GCTTAGAGATAAATTAATTA+AGG	0.288422	6_4:-46043627	Msa0989380:five_prime_UTR
CCAACTATAGGTGTGGAATT+TGG	0.292326	6_4:-46043451	Msa0989380:CDS
CTTCTTTCTTTGGAATTAAA+GGG	0.321247	6_4:-46043674	Msa0989380:five_prime_UTR
GTATAATCATATATTATATA+TGG	0.342543	6_4:-46043596	Msa0989380:exon
AAACAAACAACAATATCATT+TGG	0.363384	6_4:-46043728	Msa0989380:five_prime_UTR
TATCATAAGCCATAAAAGTT+TGG	0.376145	6_4:-46040011	Msa0989380:CDS
CAACTCCAGAATCTCCAATT+AGG	0.385915	6_4:+46043530	None:intergenic
ATATGAATTTCCTTTCCATT+AGG	0.394629	6_4:+46039956	None:intergenic
ACAAAATTAGGTCTTCCTAA+TGG	0.406139	6_4:-46039971	Msa0989380:CDS
GTTGAGAAAGAAGAAGGAAA+AGG	0.409108	6_4:-46040133	Msa0989380:CDS
TCATACTATAGAGGAGCATT+GGG	0.412063	6_4:-46040298	Msa0989380:CDS
CCAAAGAAAGAAGACTAATA+GGG	0.426224	6_4:+46043684	None:intergenic
CTTGATTCCAAGCCAACTAT+AGG	0.426449	6_4:-46043463	Msa0989380:CDS
TTGAGAAAGAAGAAGGAAAA+GGG	0.430619	6_4:-46040132	Msa0989380:CDS
GGAAATCAAATCTTATTTCA+AGG	0.434954	6_4:-46043507	Msa0989380:CDS
TTCCACACCTATAGTTGGCT+TGG	0.436306	6_4:+46043456	None:intergenic
CTCATACTATAGAGGAGCAT+TGG	0.460380	6_4:-46040299	Msa0989380:CDS
CTAATTGGAGATTCTGGAGT+TGG	0.468367	6_4:-46043529	Msa0989380:CDS
AGGGAAGTTGAGAAAGAAGA+AGG	0.471348	6_4:-46040139	Msa0989380:CDS
GCTCATCAAAGCACAAATAT+GGG	0.473052	6_4:-46043401	Msa0989380:CDS
CCAAATTCCACACCTATAGT+TGG	0.474123	6_4:+46043451	None:intergenic
AAACTGATTTGAGTCAATCA+AGG	0.488203	6_4:-46040159	Msa0989380:CDS
TAATTGGAGATTCTGGAGTT+GGG	0.500708	6_4:-46043528	Msa0989380:CDS
ATCACAAGCTCATACTATAG+AGG	0.512214	6_4:-46040307	Msa0989380:CDS
TATTTAATACATCAAGCTCA+TGG	0.515637	6_4:-46039788	Msa0989380:three_prime_UTR
ATTAAAGGGTATTACAAAAG+AGG	0.515732	6_4:-46043660	Msa0989380:five_prime_UTR
AAAGGGTTTGCAGAAAGAGA+AGG	0.525911	6_4:-46040115	Msa0989380:CDS
AAAGATTTACCTCTCTTGGC+CGG	0.528769	6_4:+46043372	None:intergenic
TTTGCAAAATTTAAATGTTG+AGG	0.537036	6_4:-46040068	Msa0989380:CDS
TGCTAGTTTATGACATAACT+AGG	0.556603	6_4:-46040270	Msa0989380:CDS
ATTTGGTTACAAGAACATCA+AGG	0.563030	6_4:-46043434	Msa0989380:CDS
ATTAGGTCTTCCTAATGGAA+AGG	0.586847	6_4:-46039966	Msa0989380:CDS
AACTGATTTGAGTCAATCAA+GGG	0.588682	6_4:-46040158	Msa0989380:CDS
GCACAAATATGGGACACTGC+CGG	0.604045	6_4:-46043391	Msa0989380:CDS
TTCCAAGCCAACTATAGGTG+TGG	0.609900	6_4:-46043458	Msa0989380:CDS
GGGACACTGCCGGCCAAGAG+AGG	0.610199	6_4:-46043381	Msa0989380:intron
ATATGGAGCAAGTAATGAGA+AGG	0.621492	6_4:+46043776	None:intergenic
GCAAGTAATGAGAAGGTGCA+TGG	0.624245	6_4:+46043783	None:intergenic
AGAAAGAAGACTAATAGGGA+AGG	0.632828	6_4:+46043688	None:intergenic
ATACTATAGAGGAGCATTGG+GGG	0.641465	6_4:-46040296	Msa0989380:CDS
AGAATTTGGAAATGAAGACA+TGG	0.647401	6_4:-46040203	Msa0989380:CDS
CATACTATAGAGGAGCATTG+GGG	0.659725	6_4:-46040297	Msa0989380:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TATATATTTAATTTTTTTTT+AGG	-	chr6_4:46041375-46041394	Msa0989380:intron	0.0%
!!	ATTATAAATTTAATTATAAT+GGG	-	chr6_4:46041406-46041425	Msa0989380:intron	0.0%
!!	TTATAAAGTATATAAAAAGA+AGG	+	chr6_4:46039828-46039847	None:intergenic	10.0%
!!	GTATAATCATATATTATATA+TGG	-	chr6_4:46039978-46039997	Msa0989380:CDS	10.0%
!!!	TTAATTTTTTTTTAGGATAA+TGG	-	chr6_4:46041382-46041401	Msa0989380:intron	10.0%
!!!	TAATTTTTTTTTAGGATAAT+GGG	-	chr6_4:46041383-46041402	Msa0989380:intron	10.0%
!!	AATTAGTACATAAATTAAAT+TGG	-	chr6_4:46042000-46042019	Msa0989380:intron	10.0%
!!!	TTTTTAAAATTTTACGATAT+TGG	-	chr6_4:46043154-46043173	Msa0989380:intron	10.0%
!!!	CTTTTGTTAATATAAAAAAA+TGG	-	chr6_4:46043334-46043353	Msa0989380:intron	10.0%
!!	TATAAAAAGAAGGATATATA+TGG	+	chr6_4:46039818-46039837	None:intergenic	15.0%
!!	TCGTAAATAAATAAAACTAA+AGG	-	chr6_4:46040931-46040950	Msa0989380:intron	15.0%
!!	TCTATAAATAGAATAATTTC+AGG	-	chr6_4:46041263-46041282	Msa0989380:intron	15.0%
!!!	TTTTCTTTAACATAATTTAG+AGG	+	chr6_4:46041606-46041625	None:intergenic	15.0%
!!!	TGTTTTTTCTTTTTAAGAAA+AGG	+	chr6_4:46041859-46041878	None:intergenic	15.0%
!!!	AAAATAAAAAGCATTTTGAT+GGG	+	chr6_4:46043128-46043147	None:intergenic	15.0%
!!!	TAAAATAAAAAGCATTTTGA+TGG	+	chr6_4:46043129-46043148	None:intergenic	15.0%
!!!	TAAATATGTGTACAATTTTA+TGG	-	chr6_4:46043229-46043248	Msa0989380:intron	15.0%
!!!	TTTGTATTATTCTTTTAGTT+TGG	-	chr6_4:46043758-46043777	Msa0989380:five_prime_UTR	15.0%
!!!	TTGTATTATTCTTTTAGTTT+GGG	-	chr6_4:46043759-46043778	Msa0989380:five_prime_UTR	15.0%
!!	AAACAAACAACAATATCATT+TGG	-	chr6_4:46039846-46039865	Msa0989380:three_prime_UTR	20.0%
!!	GCTTAGAGATAAATTAATTA+AGG	-	chr6_4:46039947-46039966	Msa0989380:CDS	20.0%
!!	AAACTTAGGTTACATAAATT+TGG	+	chr6_4:46040342-46040361	None:intergenic	20.0%
!!	CTGAATATGATAGATAAAAT+CGG	+	chr6_4:46040391-46040410	None:intergenic	20.0%
!!	AAACATATGAAACACATATA+CGG	-	chr6_4:46040455-46040474	Msa0989380:intron	20.0%
!!!	AGATCTTTTCAAATTATTGA+CGG	+	chr6_4:46040522-46040541	None:intergenic	20.0%
!!	CAAAAACTAATTAAAAGTCA+GGG	-	chr6_4:46041097-46041116	Msa0989380:intron	20.0%
!!!	TATAAGTTTGGTTATTTTTG+TGG	-	chr6_4:46041132-46041151	Msa0989380:intron	20.0%
!!	ATAAATAGAATAATTTCAGG+TGG	-	chr6_4:46041266-46041285	Msa0989380:intron	20.0%
!!!	TAAATAGAATAATTTCAGGT+GGG	-	chr6_4:46041267-46041286	Msa0989380:intron	20.0%
!!	TAAATTATAAGCTTGACATT+AGG	-	chr6_4:46041319-46041338	Msa0989380:intron	20.0%
!!!	TAATTTTTCGTCAAAAGAAA+AGG	-	chr6_4:46041350-46041369	Msa0989380:intron	20.0%
!!	TTCTTATATCAATATCAACA+CGG	-	chr6_4:46041501-46041520	Msa0989380:intron	20.0%
!!!	AAAAAATTAAACTTGGGTTT+TGG	+	chr6_4:46042220-46042239	None:intergenic	20.0%
!!!	AAAACCCAAGTTTAATTTTT+TGG	-	chr6_4:46042219-46042238	Msa0989380:intron	20.0%
!!	TGTTCCAAAAAATTAAACTT+GGG	+	chr6_4:46042226-46042245	None:intergenic	20.0%
!!	TTGTTCCAAAAAATTAAACT+TGG	+	chr6_4:46042227-46042246	None:intergenic	20.0%
!!!	TTTTTGGAACAATTTTTATC+AGG	-	chr6_4:46042235-46042254	Msa0989380:intron	20.0%
!!	TAAAAAAAACCTAGTACATA+TGG	-	chr6_4:46042321-46042340	Msa0989380:intron	20.0%
!!!	TTATTGAGTTATTGATTGTA+GGG	+	chr6_4:46042773-46042792	None:intergenic	20.0%
!!!	ATTATTGAGTTATTGATTGT+AGG	+	chr6_4:46042774-46042793	None:intergenic	20.0%
!!!	TGTCATTTAATTTCAATGAT+TGG	-	chr6_4:46042927-46042946	Msa0989380:intron	20.0%
!!!	GAAATATTCCTTTCTTTTTA+TGG	+	chr6_4:46043077-46043096	None:intergenic	20.0%
!!	TTTGCAAAATTTAAATGTTG+AGG	-	chr6_4:46043506-46043525	Msa0989380:CDS	20.0%
!!!	TTTTTTCTTCCAAACTTTTA+TGG	+	chr6_4:46043575-46043594	None:intergenic	20.0%
!!!	TCTTCTTTCTTTGGAATTAA+AGG	-	chr6_4:46039899-46039918	Msa0989380:exon	25.0%
!!!	CTTCTTTCTTTGGAATTAAA+GGG	-	chr6_4:46039900-46039919	Msa0989380:exon	25.0%
!!!	ATTAAAGGGTATTACAAAAG+AGG	-	chr6_4:46039914-46039933	Msa0989380:CDS	25.0%
!!	GGAAATCAAATCTTATTTCA+AGG	-	chr6_4:46040067-46040086	Msa0989380:CDS	25.0%
!	AAAAAAAGATTTACCTCTCT+TGG	+	chr6_4:46040209-46040228	None:intergenic	25.0%
!!!	TAGCAAAGGTTTTGTTTTAA+TGG	-	chr6_4:46040308-46040327	Msa0989380:CDS	25.0%
!!	TCATATGTTTTTCGTAATAG+TGG	+	chr6_4:46040445-46040464	None:intergenic	25.0%
!	TTCACTATAATTGTATGTGT+TGG	-	chr6_4:46040547-46040566	Msa0989380:intron	25.0%
!	TATGAAACATCAACACTTAT+CGG	+	chr6_4:46040598-46040617	None:intergenic	25.0%
!!	GTCTTTTTGCTTTCTTTTTT+TGG	-	chr6_4:46040666-46040685	Msa0989380:intron	25.0%
!!!	TTTCTTTTTTTGGCTTTAGT+TGG	-	chr6_4:46040676-46040695	Msa0989380:intron	25.0%
!!	ACATATTCAGTTTTCAAAGT+TGG	-	chr6_4:46040724-46040743	Msa0989380:intron	25.0%
!	AATTCAAGATATCGTTATCA+AGG	+	chr6_4:46041054-46041073	None:intergenic	25.0%
!	GCAAAAACTAATTAAAAGTC+AGG	-	chr6_4:46041096-46041115	Msa0989380:intron	25.0%
!	TAACCAAACTTATACTCAAT+TGG	+	chr6_4:46041126-46041145	None:intergenic	25.0%
!	AACAAATGCTCAATATTTGA+AGG	-	chr6_4:46041451-46041470	Msa0989380:intron	25.0%
!!	GAATTATGTAACACGTTTTA+AGG	-	chr6_4:46041533-46041552	Msa0989380:intron	25.0%
!	CAAAATATGGTTAGCAAAAT+TGG	-	chr6_4:46041716-46041735	Msa0989380:intron	25.0%
!	GTCATCACATAACTAATTAA+TGG	+	chr6_4:46041777-46041796	None:intergenic	25.0%
!	TGTCAAGATGATAGAAAATT+TGG	+	chr6_4:46041910-46041929	None:intergenic	25.0%
!	TGATGAACTAAAATATAGTG+AGG	+	chr6_4:46042039-46042058	None:intergenic	25.0%
!!!	TTTTTTTCTCTTTTTTCACG+TGG	-	chr6_4:46042062-46042081	Msa0989380:intron	25.0%
!	TTTATTAAACTGAACTCAAG+CGG	-	chr6_4:46042165-46042184	Msa0989380:intron	25.0%
!!	CATATTTTTCCATATGTACT+AGG	+	chr6_4:46042333-46042352	None:intergenic	25.0%
!!	GTTATCTTTTATAGAATGAG+TGG	-	chr6_4:46042373-46042392	Msa0989380:intron	25.0%
!!	ATAGATCTAGACATTTTAAG+TGG	+	chr6_4:46042515-46042534	None:intergenic	25.0%
!	GCATTGAATTGAAAATAACA+TGG	+	chr6_4:46042560-46042579	None:intergenic	25.0%
!	AACAACTTTGTCATCTATTA+CGG	-	chr6_4:46042988-46043007	Msa0989380:intron	25.0%
!!	AAGAGAAGGTTTATGTTTTA+TGG	-	chr6_4:46043473-46043492	Msa0989380:CDS	25.0%
!!	TTTTATGGCTTATGATATCA+TGG	+	chr6_4:46043560-46043579	None:intergenic	25.0%
!	TATCATAAGCCATAAAAGTT+TGG	-	chr6_4:46043563-46043582	Msa0989380:CDS	25.0%
!	AGTTTGGAAGAAAAAATGAA+TGG	-	chr6_4:46043579-46043598	Msa0989380:CDS	25.0%
!	GTTTGGAAGAAAAAATGAAT+GGG	-	chr6_4:46043580-46043599	Msa0989380:CDS	25.0%
!	AAAATGAATGGGACAAAATT+AGG	-	chr6_4:46043591-46043610	Msa0989380:exon	25.0%
!	ATATGAATTTCCTTTCCATT+AGG	+	chr6_4:46043621-46043640	None:intergenic	25.0%
!	TATTTAATACATCAAGCTCA+TGG	-	chr6_4:46043786-46043805	Msa0989380:five_prime_UTR	25.0%
	CCAAAGAAAGAAGACTAATA+GGG	+	chr6_4:46039893-46039912	None:intergenic	30.0%
	TCCAAAGAAAGAAGACTAAT+AGG	+	chr6_4:46039894-46039913	None:intergenic	30.0%
	ATTTGGTTACAAGAACATCA+AGG	-	chr6_4:46040140-46040159	Msa0989380:CDS	30.0%
	GATGTTGAAGACAAGAAAAA+GGG	+	chr6_4:46040287-46040306	None:intergenic	30.0%
	AGATGTTGAAGACAAGAAAA+AGG	+	chr6_4:46040288-46040307	None:intergenic	30.0%
	ACCTAAGTTTGAATCCTTAT+TGG	-	chr6_4:46040352-46040371	Msa0989380:intron	30.0%
	TCCAATAAGGATTCAAACTT+AGG	+	chr6_4:46040356-46040375	None:intergenic	30.0%
!	TTTCATAAACCCTTTTATGC+AGG	-	chr6_4:46040611-46040630	Msa0989380:intron	30.0%
	TTTCAAAGTTGGCGTTTATT+TGG	-	chr6_4:46040735-46040754	Msa0989380:intron	30.0%
	AATGCAGCAACAAACAAAAA+GGG	+	chr6_4:46040867-46040886	None:intergenic	30.0%
	AAATGCAGCAACAAACAAAA+AGG	+	chr6_4:46040868-46040887	None:intergenic	30.0%
	TTGCCAATTGAGTATAAGTT+TGG	-	chr6_4:46041120-46041139	Msa0989380:intron	30.0%
	TGATTGAAAGTCAAAATCGA+AGG	+	chr6_4:46041658-46041677	None:intergenic	30.0%
	TGACTTTCAATCATTTCTTG+AGG	-	chr6_4:46041665-46041684	Msa0989380:intron	30.0%
	TTTCAATCATTTCTTGAGGA+AGG	-	chr6_4:46041669-46041688	Msa0989380:intron	30.0%
	TTCAATCATTTCTTGAGGAA+GGG	-	chr6_4:46041670-46041689	Msa0989380:intron	30.0%
	ACTCAAACTATCGAATAGAA+TGG	-	chr6_4:46042125-46042144	Msa0989380:intron	30.0%
	AAACTATCGAATAGAATGGA+AGG	-	chr6_4:46042129-46042148	Msa0989380:intron	30.0%
	AACTATCGAATAGAATGGAA+GGG	-	chr6_4:46042130-46042149	Msa0989380:intron	30.0%
!	TTTTCTTCTATACAAACCAG+AGG	-	chr6_4:46042296-46042315	Msa0989380:intron	30.0%
	TTTCTTCTATACAAACCAGA+GGG	-	chr6_4:46042297-46042316	Msa0989380:intron	30.0%
!!	ATCTAGACATTTTAAGTGGT+GGG	+	chr6_4:46042511-46042530	None:intergenic	30.0%
!!	GCAAATCTTTGATTTGAGTA+AGG	-	chr6_4:46042578-46042597	Msa0989380:intron	30.0%
!!	ATCTTTGATTTGAGTAAGGT+TGG	-	chr6_4:46042582-46042601	Msa0989380:intron	30.0%
!!	TCTTTGATTTGAGTAAGGTT+GGG	-	chr6_4:46042583-46042602	Msa0989380:intron	30.0%
!	GAAAAGCATGTGACATAAAA+TGG	-	chr6_4:46042734-46042753	Msa0989380:intron	30.0%
!	CATGTGACATAAAATGGTTT+TGG	-	chr6_4:46042740-46042759	Msa0989380:intron	30.0%
	ATTGTGTAAAATGATTGCTG+AGG	-	chr6_4:46042848-46042867	Msa0989380:intron	30.0%
	GATTCACACCATAAAAAGAA+AGG	-	chr6_4:46043066-46043085	Msa0989380:intron	30.0%
!!!	AAAAGCATTTTGATGGGATA+TGG	+	chr6_4:46043122-46043141	None:intergenic	30.0%
	CAAGCAATGATCATAATTGA+AGG	+	chr6_4:46043184-46043203	None:intergenic	30.0%
!	TGTGTACAATTTTATGGTGT+AGG	-	chr6_4:46043235-46043254	Msa0989380:intron	30.0%
!	TGCTAGTTTATGACATAACT+AGG	-	chr6_4:46043304-46043323	Msa0989380:intron	30.0%
	TTACATGAGCTTAGAGAATT+TGG	-	chr6_4:46043357-46043376	Msa0989380:intron	30.0%
	AGAATTTGGAAATGAAGACA+TGG	-	chr6_4:46043371-46043390	Msa0989380:intron	30.0%
!!	AAACTGATTTGAGTCAATCA+AGG	-	chr6_4:46043415-46043434	Msa0989380:CDS	30.0%
!!	AACTGATTTGAGTCAATCAA+GGG	-	chr6_4:46043416-46043435	Msa0989380:CDS	30.0%
	TTGAGAAAGAAGAAGGAAAA+GGG	-	chr6_4:46043442-46043461	Msa0989380:CDS	30.0%
	ACAAAATTAGGTCTTCCTAA+TGG	-	chr6_4:46043603-46043622	Msa0989380:five_prime_UTR	30.0%
	ATATGGAGCAAGTAATGAGA+AGG	+	chr6_4:46039801-46039820	None:intergenic	35.0%
	AGAAAGAAGACTAATAGGGA+AGG	+	chr6_4:46039889-46039908	None:intergenic	35.0%
!!	CCCTATTAGTCTTCTTTCTT+TGG	-	chr6_4:46039890-46039909	Msa0989380:exon	35.0%
!!!	CAATTAGGACAGTTTTGAAG+AGG	+	chr6_4:46040032-46040051	None:intergenic	35.0%
	CTCTTCAAAACTGTCCTAAT+TGG	-	chr6_4:46040030-46040049	Msa0989380:CDS	35.0%
!!	TAATTGGAGATTCTGGAGTT+GGG	-	chr6_4:46040046-46040065	Msa0989380:CDS	35.0%
	AGCTCATCAAAGCACAAATA+TGG	-	chr6_4:46040172-46040191	Msa0989380:CDS	35.0%
	GCTCATCAAAGCACAAATAT+GGG	-	chr6_4:46040173-46040192	Msa0989380:CDS	35.0%
	TGTCTTCAACATCTTAGCAA+AGG	-	chr6_4:46040294-46040313	Msa0989380:CDS	35.0%
	GACGAATGATTGTTCCAATA+AGG	+	chr6_4:46040369-46040388	None:intergenic	35.0%
!	TAGTGGATATTCAAGAGGTA+TGG	+	chr6_4:46040428-46040447	None:intergenic	35.0%
!!	CGTAATAGTGGATATTCAAG+AGG	+	chr6_4:46040433-46040452	None:intergenic	35.0%
	CATATGCATCCTGCATAAAA+GGG	+	chr6_4:46040623-46040642	None:intergenic	35.0%
	TCATATGCATCCTGCATAAA+AGG	+	chr6_4:46040624-46040643	None:intergenic	35.0%
	ATGTTAGTGCTAGTTGGAAA+AGG	+	chr6_4:46040708-46040727	None:intergenic	35.0%
	CTGAATATGTTAGTGCTAGT+TGG	+	chr6_4:46040714-46040733	None:intergenic	35.0%
	TGTTTGTGGGATGTAGATAA+GGG	+	chr6_4:46040835-46040854	None:intergenic	35.0%
	TGATAATCCCATTATCACCA+AGG	+	chr6_4:46041294-46041313	None:intergenic	35.0%
	TGGATTATTGCAATGTGTCA+TGG	-	chr6_4:46041736-46041755	Msa0989380:intron	35.0%
	TTATGTGATGACAGTTGTCA+TGG	-	chr6_4:46041785-46041804	Msa0989380:intron	35.0%
	GATGATAGAAAATTTGGACG+AGG	+	chr6_4:46041904-46041923	None:intergenic	35.0%
!!	TCTAGACATTTTAAGTGGTG+GGG	+	chr6_4:46042510-46042529	None:intergenic	35.0%
!!	GATCTAGACATTTTAAGTGG+TGG	+	chr6_4:46042512-46042531	None:intergenic	35.0%
	AAACCAAGTCGACTATCAAT+TGG	-	chr6_4:46042706-46042725	Msa0989380:intron	35.0%
!	TGAGTTATTGATTGTAGGGT+TGG	+	chr6_4:46042769-46042788	None:intergenic	35.0%
	CTCTAAGTGAATGTCATGTT+TGG	+	chr6_4:46042820-46042839	None:intergenic	35.0%
	TTCCTAAAGAAAATCTCACG+AGG	-	chr6_4:46042965-46042984	Msa0989380:intron	35.0%
!	TTCCTCGTGAGATTTTCTTT+AGG	+	chr6_4:46042970-46042989	None:intergenic	35.0%
	ATCACAAGCTCATACTATAG+AGG	-	chr6_4:46043267-46043286	Msa0989380:intron	35.0%
!!	TCATACTATAGAGGAGCATT+GGG	-	chr6_4:46043276-46043295	Msa0989380:intron	35.0%
	GTTGAGAAAGAAGAAGGAAA+AGG	-	chr6_4:46043441-46043460	Msa0989380:CDS	35.0%
	ATTAGGTCTTCCTAATGGAA+AGG	-	chr6_4:46043608-46043627	Msa0989380:five_prime_UTR	35.0%
	ACTGTCCTAATTGGAGATTC+TGG	-	chr6_4:46040039-46040058	Msa0989380:CDS	40.0%
	CAACTCCAGAATCTCCAATT+AGG	+	chr6_4:46040047-46040066	None:intergenic	40.0%
!!	CTAATTGGAGATTCTGGAGT+TGG	-	chr6_4:46040045-46040064	Msa0989380:CDS	40.0%
	CTTGATTCCAAGCCAACTAT+AGG	-	chr6_4:46040111-46040130	Msa0989380:CDS	40.0%
	CCAAATTCCACACCTATAGT+TGG	+	chr6_4:46040126-46040145	None:intergenic	40.0%
	CCAACTATAGGTGTGGAATT+TGG	-	chr6_4:46040123-46040142	Msa0989380:CDS	40.0%
	AAAGATTTACCTCTCTTGGC+CGG	+	chr6_4:46040205-46040224	None:intergenic	40.0%
	CACAGACATTGAACACGAAA+CGG	-	chr6_4:46040479-46040498	Msa0989380:intron	40.0%
!	TATTGACGGTATTAGCCTGT+CGG	+	chr6_4:46040508-46040527	None:intergenic	40.0%
	TATGTGTTGGAGTCTGACAT+CGG	-	chr6_4:46040560-46040579	Msa0989380:intron	40.0%
	GTGTTTGTGGGATGTAGATA+AGG	+	chr6_4:46040836-46040855	None:intergenic	40.0%
	TATCTACATCCCACAAACAC+TGG	-	chr6_4:46040836-46040855	Msa0989380:intron	40.0%
	AGCAACAAACAAAAAGGGTG+GGG	+	chr6_4:46040862-46040881	None:intergenic	40.0%
	CAGCAACAAACAAAAAGGGT+GGG	+	chr6_4:46040863-46040882	None:intergenic	40.0%
	TTATCAAGGTCACGTATACG+AGG	+	chr6_4:46041040-46041059	None:intergenic	40.0%
!	AATAATTTCAGGTGGGACCT+TGG	-	chr6_4:46041274-46041293	Msa0989380:intron	40.0%
	GCGAACTGGTTAGCAAAATA+TGG	-	chr6_4:46041703-46041722	Msa0989380:intron	40.0%
!!!	CTTTTTTCACGTGGAAGTGT+AGG	-	chr6_4:46042071-46042090	Msa0989380:intron	40.0%
!	GTAATCTAGAGTTCGATCGA+AGG	+	chr6_4:46042270-46042289	None:intergenic	40.0%
!!!	CTAGGTTTTTTTTAGCCCTC+TGG	+	chr6_4:46042315-46042334	None:intergenic	40.0%
!	TTGATTTGAGTAAGGTTGGG+TGG	-	chr6_4:46042586-46042605	Msa0989380:intron	40.0%
	TGATTTGAGTAAGGTTGGGT+GGG	-	chr6_4:46042587-46042606	Msa0989380:intron	40.0%
	ACGGTCATATGTACCTAACT+CGG	-	chr6_4:46043007-46043026	Msa0989380:intron	40.0%
!	CTCATACTATAGAGGAGCAT+TGG	-	chr6_4:46043275-46043294	Msa0989380:intron	40.0%
!!	CATACTATAGAGGAGCATTG+GGG	-	chr6_4:46043277-46043296	Msa0989380:intron	40.0%
!!	ATACTATAGAGGAGCATTGG+GGG	-	chr6_4:46043278-46043297	Msa0989380:intron	40.0%
	AGGGAAGTTGAGAAAGAAGA+AGG	-	chr6_4:46043435-46043454	Msa0989380:CDS	40.0%
	AAAGGGTTTGCAGAAAGAGA+AGG	-	chr6_4:46043459-46043478	Msa0989380:CDS	40.0%
!	GCAAGTAATGAGAAGGTGCA+TGG	+	chr6_4:46039794-46039813	None:intergenic	45.0%
	TTCCAAGCCAACTATAGGTG+TGG	-	chr6_4:46040116-46040135	Msa0989380:CDS	45.0%
	TTCCACACCTATAGTTGGCT+TGG	+	chr6_4:46040121-46040140	None:intergenic	45.0%
	ATGTGTTGGAGTCTGACATC+GGG	-	chr6_4:46040561-46040580	Msa0989380:intron	45.0%
	GCAGCAACAAACAAAAAGGG+TGG	+	chr6_4:46040864-46040883	None:intergenic	45.0%
	AGGGAAACAATTGTGCGAAC+TGG	-	chr6_4:46041689-46041708	Msa0989380:intron	45.0%
	AAGCGGTTAACGATCCTAGA+AGG	-	chr6_4:46042182-46042201	Msa0989380:intron	45.0%
	GGCGAACAATTTGTCCTTCT+AGG	+	chr6_4:46042199-46042218	None:intergenic	45.0%
	GATTTGAGTAAGGTTGGGTG+GGG	-	chr6_4:46042588-46042607	Msa0989380:intron	45.0%
!	GTGGGTCTAGGACAAGAATT+GGG	-	chr6_4:46042610-46042629	Msa0989380:intron	45.0%
!	CGACCAATTGATAGTCGACT+TGG	+	chr6_4:46042712-46042731	None:intergenic	45.0%
	AGTCGACTATCAATTGGTCG+AGG	-	chr6_4:46042712-46042731	Msa0989380:intron	45.0%
	CGGTCATATGTACCTAACTC+GGG	-	chr6_4:46043008-46043027	Msa0989380:intron	45.0%
!!	GATTATAAATTTAATTATAA+TGG	-	chr6_4:46041405-46041424	Msa0989380:intron	5.0%
	GCACAAATATGGGACACTGC+CGG	-	chr6_4:46040183-46040202	Msa0989380:CDS	50.0%
!	AGGTGGGACCTTGGTGATAA+TGG	-	chr6_4:46041283-46041302	Msa0989380:intron	50.0%
!	GGTGGGACCTTGGTGATAAT+GGG	-	chr6_4:46041284-46041303	Msa0989380:intron	50.0%
!	GGTGGGTCTAGGACAAGAAT+TGG	-	chr6_4:46042609-46042628	Msa0989380:intron	50.0%
	CGAAACTAGTCACCCGAGTT+AGG	+	chr6_4:46043023-46043042	None:intergenic	50.0%
	AACACGAAACGGACACCGAC+AGG	-	chr6_4:46040490-46040509	Msa0989380:intron	55.0%
	TTGAGTAAGGTTGGGTGGGG+TGG	-	chr6_4:46042591-46042610	Msa0989380:intron	55.0%
	TGAGTAAGGTTGGGTGGGGT+GGG	-	chr6_4:46042592-46042611	Msa0989380:intron	55.0%
	AGGGTGGGGCCAGTGTTTGT+GGG	+	chr6_4:46040848-46040867	None:intergenic	60.0%
	AAGGGTGGGGCCAGTGTTTG+TGG	+	chr6_4:46040849-46040868	None:intergenic	60.0%
	AGGTTGGGTGGGGTGGGTCT+AGG	-	chr6_4:46042598-46042617	Msa0989380:intron	65.0%
	GGGACACTGCCGGCCAAGAG+AGG	-	chr6_4:46040193-46040212	Msa0989380:CDS	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr6_4	gene	46039781	46043815	46039781	ID=Msa0989380;Name=Msa0989380
chr6_4	mRNA	46039781	46043815	46039781	ID=Msa0989380-mRNA-1;Parent=Msa0989380;Name=Msa0989380-mRNA-1;_AED=0.01;_eAED=0.01;_QI=216\|1\|1\|1\|1\|1\|2\|126\|216
chr6_4	exon	46039781	46040339	46039781	ID=Msa0989380-mRNA-1:exon:10343;Parent=Msa0989380-mRNA-1
chr6_4	exon	46043382	46043815	46043382	ID=Msa0989380-mRNA-1:exon:10342;Parent=Msa0989380-mRNA-1
chr6_4	five_prime_UTR	46043600	46043815	46043600	ID=Msa0989380-mRNA-1:five_prime_utr;Parent=Msa0989380-mRNA-1
chr6_4	CDS	46043382	46043599	46043382	ID=Msa0989380-mRNA-1:cds;Parent=Msa0989380-mRNA-1
chr6_4	CDS	46039907	46040339	46039907	ID=Msa0989380-mRNA-1:cds;Parent=Msa0989380-mRNA-1
chr6_4	three_prime_UTR	46039781	46039906	46039781	ID=Msa0989380-mRNA-1:three_prime_utr;Parent=Msa0989380-mRNA-1

Gene Sequence

>Msa0989380

ATGGCTGATACATTTGATGAGCAGTGTGATTACCTCTTCAAAACTGTCCTAATTGGAGATTCTGGAGTTGGGAAATCAAATCTTATTTCAAGGTTTACAAAAGATGAATTTCGACTTGATTCCAAGCCAACTATAGGTGTGGAATTTGGTTACAAGAACATCAAGGTTAGAGACAAGCTCATCAAAGCACAAATATGGGACACTGCCGGCCAAGAGAGGTTTAGAGCTATCACAAGCTCATACTATAGAGGAGCATTGGGGGCAATGCTAGTTTATGACATAACTAGGATAGTAACTTTTGTTAATATAAAAAAATGGTTACATGAGCTTAGAGAATTTGGAAATGAAGACATGGTGATCATTCTAGTAGCAAATAAAACTGATTTGAGTCAATCAAGGGAAGTTGAGAAAGAAGAAGGAAAAGGGTTTGCAGAAAGAGAAGGTTTATGTTTTATGGAAACTTCTGCTTTGCAAAATTTAAATGTTGAGGATGCATTCTTAGAAATGATTACTAAGATCCATGATATCATAAGCCATAAAAGTTTGGAAGAAAAAATGAATGGGACAAAATTAGGTCTTCCTAATGGAAAGGAAATTCATATAGCTGATGAAGTGACTGCTACTAAACAAGTTAATTGTTGTTATGTATGA

Protein sequence

>Msa0989380

MADTFDEQCDYLFKTVLIGDSGVGKSNLISRFTKDEFRLDSKPTIGVEFGYKNIKVRDKLIKAQIWDTAGQERFRAITSSYYRGALGAMLVYDITRIVTFVNIKKWLHELREFGNEDMVIILVANKTDLSQSREVEKEEGKGFAEREGLCFMETSALQNLNVEDAFLEMITKIHDIISHKSLEEKMNGTKLGLPNGKEIHIADEVTATKQVNCCYV*