Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0811130 | ACJ85836.1 | 89.655 | 174 | 7 | 1 | 3 | 176 | 95 | 257 | 4.61e-105 | 311 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0811130 | sp|Q93YB2|AADH2_PEA | 86.782 | 174 | 12 | 1 | 3 | 176 | 341 | 503 | 1.17e-104 | 311 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0811130 | B7FM53 | 89.655 | 174 | 7 | 1 | 3 | 176 | 95 | 257 | 2.20e-105 | 311 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0007990 | Msa0811130 | 0.819916 | 9.033412e-53 | -8.615850e-47 |
| Msa0014570 | Msa0811130 | 0.810242 | 1.270258e-50 | -8.615850e-47 |
| Msa0022550 | Msa0811130 | 0.851616 | 7.900966e-61 | -8.615850e-47 |
| Msa0022750 | Msa0811130 | -0.846187 | 2.542525e-59 | -8.615850e-47 |
| Msa0031180 | Msa0811130 | 0.802614 | 5.161383e-49 | -8.615850e-47 |
| Msa0039250 | Msa0811130 | 0.842389 | 2.665153e-58 | -8.615850e-47 |
| Msa0042550 | Msa0811130 | 0.827837 | 1.254583e-54 | -8.615850e-47 |
| Msa0043500 | Msa0811130 | 0.810226 | 1.280896e-50 | -8.615850e-47 |
| Msa0045790 | Msa0811130 | 0.824996 | 5.964029e-54 | -8.615850e-47 |
| Msa0046160 | Msa0811130 | 0.820816 | 5.614642e-53 | -8.615850e-47 |
| Msa0049790 | Msa0811130 | 0.803552 | 3.301447e-49 | -8.615850e-47 |
| Msa0054820 | Msa0811130 | 0.831079 | 2.045247e-55 | -8.615850e-47 |
| Msa0055070 | Msa0811130 | 0.821819 | 3.296291e-53 | -8.615850e-47 |
| Msa0056450 | Msa0811130 | 0.823635 | 1.245598e-53 | -8.615850e-47 |
| Msa0061340 | Msa0811130 | 0.803130 | 4.036542e-49 | -8.615850e-47 |
| Msa0070430 | Msa0811130 | 0.800735 | 1.253682e-48 | -8.615850e-47 |
| Msa0077450 | Msa0811130 | 0.802428 | 5.636219e-49 | -8.615850e-47 |
| Msa0080830 | Msa0811130 | 0.800076 | 1.707972e-48 | -8.615850e-47 |
| Msa0081650 | Msa0811130 | 0.807591 | 4.691543e-50 | -8.615850e-47 |
| Msa0091600 | Msa0811130 | 0.858382 | 8.561750e-63 | -8.615850e-47 |
| Msa0100160 | Msa0811130 | 0.832146 | 1.116633e-55 | -8.615850e-47 |
| Msa0101020 | Msa0811130 | 0.816410 | 5.610366e-52 | -8.615850e-47 |
| Msa0103250 | Msa0811130 | 0.834176 | 3.487705e-56 | -8.615850e-47 |
| Msa0106620 | Msa0811130 | 0.810764 | 9.798326e-51 | -8.615850e-47 |
| Msa0106710 | Msa0811130 | 0.808792 | 2.602028e-50 | -8.615850e-47 |
| Msa0616550 | Msa0811130 | 0.808344 | 3.242791e-50 | -8.615850e-47 |
| Msa0620230 | Msa0811130 | 0.806892 | 6.595887e-50 | -8.615850e-47 |
| Msa0641730 | Msa0811130 | 0.815683 | 8.153223e-52 | -8.615850e-47 |
| Msa0648520 | Msa0811130 | 0.808191 | 3.495747e-50 | -8.615850e-47 |
| Msa0652690 | Msa0811130 | 0.807402 | 5.144483e-50 | -8.615850e-47 |
| Msa0661320 | Msa0811130 | 0.812354 | 4.421818e-51 | -8.615850e-47 |
| Msa0667050 | Msa0811130 | 0.805128 | 1.550216e-49 | -8.615850e-47 |
| Msa0667790 | Msa0811130 | 0.804792 | 1.822322e-49 | -8.615850e-47 |
| Msa0686080 | Msa0811130 | 0.802723 | 4.900497e-49 | -8.615850e-47 |
| Msa0689760 | Msa0811130 | 0.811228 | 7.777061e-51 | -8.615850e-47 |
| Msa0691050 | Msa0811130 | 0.821156 | 4.689147e-53 | -8.615850e-47 |
| Msa0693380 | Msa0811130 | 0.813585 | 2.376040e-51 | -8.615850e-47 |
| Msa0710270 | Msa0811130 | 0.834452 | 2.973499e-56 | -8.615850e-47 |
| Msa0715420 | Msa0811130 | 0.803879 | 2.823412e-49 | -8.615850e-47 |
| Msa0716410 | Msa0811130 | 0.804464 | 2.133563e-49 | -8.615850e-47 |
| Msa0737570 | Msa0811130 | 0.802589 | 5.221907e-49 | -8.615850e-47 |
| Msa0743730 | Msa0811130 | 0.805503 | 1.293406e-49 | -8.615850e-47 |
| Msa0744040 | Msa0811130 | 0.819887 | 9.173726e-53 | -8.615850e-47 |
| Msa0750250 | Msa0811130 | 0.812551 | 4.004351e-51 | -8.615850e-47 |
| Msa0751260 | Msa0811130 | 0.831463 | 1.645622e-55 | -8.615850e-47 |
| Msa0756530 | Msa0811130 | 0.815450 | 9.189101e-52 | -8.615850e-47 |
| Msa0757800 | Msa0811130 | 0.808679 | 2.750905e-50 | -8.615850e-47 |
| Msa0760130 | Msa0811130 | 0.828506 | 8.654948e-55 | -8.615850e-47 |
| Msa0771280 | Msa0811130 | 0.801982 | 6.964490e-49 | -8.615850e-47 |
| Msa0784480 | Msa0811130 | 0.802354 | 5.839426e-49 | -8.615850e-47 |
| Msa0787850 | Msa0811130 | 0.827831 | 1.259079e-54 | -8.615850e-47 |
| Msa0795070 | Msa0811130 | 0.837037 | 6.581476e-57 | -8.615850e-47 |
| Msa0797930 | Msa0811130 | 0.805122 | 1.554565e-49 | -8.615850e-47 |
| Msa0811040 | Msa0811130 | 0.807140 | 5.847146e-50 | -8.615850e-47 |
| Msa0811130 | Msa0824660 | 0.809600 | 1.746199e-50 | -8.615850e-47 |
| Msa0811130 | Msa0828130 | 0.810126 | 1.346055e-50 | -8.615850e-47 |
| Msa0811130 | Msa0832090 | 0.807827 | 4.179755e-50 | -8.615850e-47 |
| Msa0811130 | Msa0836850 | 0.816312 | 5.901676e-52 | -8.615850e-47 |
| Msa0811130 | Msa0843120 | -0.807628 | 4.606383e-50 | -8.615850e-47 |
| Msa0811130 | Msa0844390 | 0.807267 | 5.495545e-50 | -8.615850e-47 |
| Msa0811130 | Msa0848530 | 0.820123 | 8.100644e-53 | -8.615850e-47 |
| Msa0811130 | Msa0856920 | 0.800568 | 1.356129e-48 | -8.615850e-47 |
| Msa0811130 | Msa0861510 | 0.803321 | 3.686064e-49 | -8.615850e-47 |
| Msa0811130 | Msa0861530 | 0.802778 | 4.774410e-49 | -8.615850e-47 |
| Msa0811130 | Msa0861600 | 0.802170 | 6.368805e-49 | -8.615850e-47 |
| Msa0811130 | Msa0863930 | 0.814850 | 1.248649e-51 | -8.615850e-47 |
| Msa0811130 | Msa0865060 | 0.838831 | 2.275690e-57 | -8.615850e-47 |
| Msa0811130 | Msa0866400 | 0.804315 | 2.291826e-49 | -8.615850e-47 |
| Msa0811130 | Msa0866410 | 0.805665 | 1.196294e-49 | -8.615850e-47 |
| Msa0811130 | Msa0868160 | 0.812378 | 4.368986e-51 | -8.615850e-47 |
| Msa0811130 | Msa0873860 | 0.828268 | 9.882128e-55 | -8.615850e-47 |
| Msa0811130 | Msa0880450 | 0.800181 | 1.625930e-48 | -8.615850e-47 |
| Msa0811130 | Msa0880950 | 0.805766 | 1.139125e-49 | -8.615850e-47 |
| Msa0811130 | Msa0900620 | 0.836386 | 9.645939e-57 | -8.615850e-47 |
| Msa0811130 | Msa0902830 | 0.800391 | 1.473562e-48 | -8.615850e-47 |
| Msa0811130 | Msa0906690 | 0.835753 | 1.396549e-56 | -8.615850e-47 |
| Msa0811130 | Msa0924310 | 0.800769 | 1.234011e-48 | -8.615850e-47 |
| Msa0811130 | Msa0926470 | 0.830430 | 2.950127e-55 | -8.615850e-47 |
| Msa0811130 | Msa0926890 | 0.806264 | 8.950385e-50 | -8.615850e-47 |
| Msa0811130 | Msa0932350 | 0.813877 | 2.049052e-51 | -8.615850e-47 |
| Msa0811130 | Msa0937430 | 0.800287 | 1.547192e-48 | -8.615850e-47 |
| Msa0811130 | Msa0939000 | 0.835136 | 2.000664e-56 | -8.615850e-47 |
| Msa0811130 | Msa0940580 | 0.800630 | 1.317106e-48 | -8.615850e-47 |
| Msa0811130 | Msa0945240 | 0.806505 | 7.963093e-50 | -8.615850e-47 |
| Msa0811130 | Msa0960740 | 0.801001 | 1.106506e-48 | -8.615850e-47 |
| Msa0811130 | Msa0969520 | 0.806136 | 9.522158e-50 | -8.615850e-47 |
| Msa0811130 | Msa0970320 | 0.802336 | 5.888667e-49 | -8.615850e-47 |
| Msa0811130 | Msa0973600 | 0.803936 | 2.747771e-49 | -8.615850e-47 |
| Msa0811130 | Msa0975940 | 0.837279 | 5.708709e-57 | -8.615850e-47 |
| Msa0811130 | Msa0986510 | 0.802292 | 6.012353e-49 | -8.615850e-47 |
| Msa0811130 | Msa0989380 | 0.800294 | 1.541944e-48 | -8.615850e-47 |
| Msa0811130 | Msa0999680 | 0.800845 | 1.190436e-48 | -8.615850e-47 |
| Msa0811130 | Msa1000160 | 0.807570 | 4.738459e-50 | -8.615850e-47 |
| Msa0811130 | Msa1002850 | 0.804745 | 1.864015e-49 | -8.615850e-47 |
| Msa0811130 | Msa1004420 | 0.806236 | 9.073198e-50 | -8.615850e-47 |
| Msa0811130 | Msa1010070 | 0.823163 | 1.606003e-53 | -8.615850e-47 |
| Msa0811130 | Msa1024090 | 0.811335 | 7.371334e-51 | -8.615850e-47 |
| Msa0811130 | Msa1028280 | 0.817348 | 3.455059e-52 | -8.615850e-47 |
| Msa0811130 | Msa1028590 | 0.801715 | 7.898826e-49 | -8.615850e-47 |
| Msa0811130 | Msa1031930 | 0.828098 | 1.085576e-54 | -8.615850e-47 |
| Msa0811130 | Msa1032170 | 0.804739 | 1.869717e-49 | -8.615850e-47 |
| Msa0811130 | Msa1034500 | 0.825736 | 3.984110e-54 | -8.615850e-47 |
| Msa0811130 | Msa1038080 | 0.803891 | 2.806928e-49 | -8.615850e-47 |
| Msa0811130 | Msa1040520 | 0.802126 | 6.504688e-49 | -8.615850e-47 |
| Msa0811130 | Msa1050910 | 0.805713 | 1.168684e-49 | -8.615850e-47 |
| Msa0811130 | Msa1051600 | 0.837496 | 5.022776e-57 | -8.615850e-47 |
| Msa0811130 | Msa1063420 | 0.812625 | 3.857978e-51 | -8.615850e-47 |
| Msa0811130 | Msa1065010 | 0.814512 | 1.483934e-51 | -8.615850e-47 |
| Msa0811130 | Msa1071770 | 0.804993 | 1.654445e-49 | -8.615850e-47 |
| Msa0811130 | Msa1080960 | 0.858830 | 6.291270e-63 | -8.615850e-47 |
| Msa0811130 | Msa1082500 | 0.811520 | 6.717908e-51 | -8.615850e-47 |
| Msa0811130 | Msa1087980 | 0.826016 | 3.419114e-54 | -8.615850e-47 |
| Msa0811130 | Msa1098270 | 0.806653 | 7.409529e-50 | -8.615850e-47 |
| Msa0811130 | Msa1098890 | 0.801809 | 7.556277e-49 | -8.615850e-47 |
| Msa0811130 | Msa1102770 | 0.829807 | 4.187411e-55 | -8.615850e-47 |
| Msa0811130 | Msa1113010 | 0.803597 | 3.230970e-49 | -8.615850e-47 |
| Msa0811130 | Msa1113590 | 0.814457 | 1.526086e-51 | -8.615850e-47 |
| Msa0811130 | Msa1118760 | 0.810485 | 1.126190e-50 | -8.615850e-47 |
| Msa0811130 | Msa1119090 | 0.843774 | 1.139319e-58 | -8.615850e-47 |
| Msa0811130 | Msa1119190 | 0.840735 | 7.271825e-58 | -8.615850e-47 |
| Msa0811130 | Msa1127770 | 0.824986 | 5.994441e-54 | -8.615850e-47 |
| Msa0811130 | Msa1133220 | 0.808864 | 2.510954e-50 | -8.615850e-47 |
| Msa0811130 | Msa1137570 | 0.813109 | 3.023130e-51 | -8.615850e-47 |
| Msa0811130 | Msa1139890 | 0.816165 | 6.364244e-52 | -8.615850e-47 |
| Msa0811130 | Msa1145810 | 0.812651 | 3.807560e-51 | -8.615850e-47 |
| Msa0811130 | Msa1152510 | 0.803119 | 4.058186e-49 | -8.615850e-47 |
| Msa0811130 | Msa1158310 | 0.823082 | 1.677074e-53 | -8.615850e-47 |
| Msa0811130 | Msa1158660 | 0.819133 | 1.362901e-52 | -8.615850e-47 |
| Msa0811130 | Msa1158830 | 0.819487 | 1.131779e-52 | -8.615850e-47 |
| Msa0811130 | Msa1188710 | 0.810106 | 1.359175e-50 | -8.615850e-47 |
| Msa0811130 | Msa1199570 | 0.805678 | 1.188561e-49 | -8.615850e-47 |
| Msa0811130 | Msa1204100 | -0.801771 | 7.693116e-49 | -8.615850e-47 |
| Msa0811130 | Msa1205370 | 0.821581 | 3.741879e-53 | -8.615850e-47 |
| Msa0811130 | Msa1208160 | 0.829123 | 6.139688e-55 | -8.615850e-47 |
| Msa0811130 | Msa1208430 | 0.811770 | 5.928088e-51 | -8.615850e-47 |
| Msa0811130 | Msa1219000 | 0.817861 | 2.646848e-52 | -8.615850e-47 |
| Msa0811130 | Msa1243870 | 0.808012 | 3.816189e-50 | -8.615850e-47 |
| Msa0811130 | Msa1250290 | 0.810299 | 1.234896e-50 | -8.615850e-47 |
| Msa0811130 | Msa1282500 | 0.816635 | 4.996228e-52 | -8.615850e-47 |
| Msa0811130 | Msa1286550 | 0.839131 | 1.903348e-57 | -8.615850e-47 |
| Msa0811130 | Msa1297290 | 0.817472 | 3.239854e-52 | -8.615850e-47 |
| Msa0811130 | Msa1298370 | 0.811284 | 7.560340e-51 | -8.615850e-47 |
| Msa0811130 | Msa1307550 | 0.800067 | 1.714546e-48 | -8.615850e-47 |
| Msa0811130 | Msa1319820 | 0.819590 | 1.072212e-52 | -8.615850e-47 |
| Msa0811130 | Msa1321050 | 0.822641 | 2.125422e-53 | -8.615850e-47 |
| Msa0811130 | Msa1323690 | 0.802437 | 5.612086e-49 | -8.615850e-47 |
| Msa0811130 | Msa1328640 | 0.812359 | 4.410342e-51 | -8.615850e-47 |
| Msa0811130 | Msa1330180 | 0.806649 | 7.422836e-50 | -8.615850e-47 |
| Msa0811130 | Msa1332760 | 0.809877 | 1.522416e-50 | -8.615850e-47 |
| Msa0811130 | Msa1341520 | 0.808099 | 3.657771e-50 | -8.615850e-47 |
| Msa0811130 | Msa1348880 | 0.808611 | 2.844143e-50 | -8.615850e-47 |
| Msa0811130 | Msa1353470 | 0.820975 | 5.163311e-53 | -8.615850e-47 |
| Msa0811130 | Msa1359560 | 0.819335 | 1.226211e-52 | -8.615850e-47 |
| Msa0811130 | Msa1366300 | 0.800600 | 1.335720e-48 | -8.615850e-47 |
| Msa0811130 | Msa1368430 | 0.835300 | 1.818588e-56 | -8.615850e-47 |
| Msa0811130 | Msa1372150 | 0.835847 | 1.321834e-56 | -8.615850e-47 |
| Msa0811130 | Msa1379590 | 0.814162 | 1.772427e-51 | -8.615850e-47 |
| Msa0811130 | Msa1379850 | 0.815663 | 8.236596e-52 | -8.615850e-47 |
| Msa0811130 | Msa1380400 | 0.843277 | 1.547248e-58 | -8.615850e-47 |
| Msa0811130 | Msa1380900 | 0.817104 | 3.920855e-52 | -8.615850e-47 |
| Msa0811130 | Msa1382400 | 0.802856 | 4.600657e-49 | -8.615850e-47 |
| Msa0811130 | Msa1383230 | 0.839966 | 1.154809e-57 | -8.615850e-47 |
| Msa0811130 | Msa1385000 | 0.817962 | 2.511342e-52 | -8.615850e-47 |
| Msa0811130 | Msa1389880 | 0.808537 | 2.950164e-50 | -8.615850e-47 |
| Msa0811130 | Msa1401270 | 0.817449 | 3.278071e-52 | -8.615850e-47 |
| Msa0811130 | Msa1402270 | 0.800581 | 1.347360e-48 | -8.615850e-47 |
| Msa0811130 | Msa1408620 | -0.806205 | 9.208294e-50 | -8.615850e-47 |
| Msa0811130 | Msa1409700 | 0.805390 | 1.366033e-49 | -8.615850e-47 |
| Msa0811130 | Msa1410420 | 0.805110 | 1.563312e-49 | -8.615850e-47 |
| Msa0811130 | Msa1418260 | 0.826539 | 2.566742e-54 | -8.615850e-47 |
| Msa0811130 | Msa1418280 | 0.804609 | 1.990332e-49 | -8.615850e-47 |
| Msa0811130 | Msa1420250 | 0.806036 | 9.998648e-50 | -8.615850e-47 |
| Msa0811130 | Msa1424640 | 0.815022 | 1.143898e-51 | -8.615850e-47 |
| Msa0811130 | Msa1436480 | 0.822518 | 2.269409e-53 | -8.615850e-47 |
| Msa0811130 | Msa1439610 | 0.804618 | 1.980846e-49 | -8.615850e-47 |
| Msa0811130 | Msa1440740 | 0.813388 | 2.625265e-51 | -8.615850e-47 |
| Msa0811130 | Msa1452120 | 0.807695 | 4.457546e-50 | -8.615850e-47 |
| Msa0811130 | Msa1454530 | 0.811006 | 8.686207e-51 | -8.615850e-47 |
| Msa0811130 | Msa1457430 | 0.813288 | 2.761664e-51 | -8.615850e-47 |
| Msa0811130 | Msa1458340 | 0.818584 | 1.816137e-52 | -8.615850e-47 |
| Msa0811130 | Msa1462360 | 0.810612 | 1.057102e-50 | -8.615850e-47 |
| Msa0811130 | Msa1463900 | 0.802630 | 5.121943e-49 | -8.615850e-47 |
| Msa0123100 | Msa0811130 | 0.803543 | 3.315197e-49 | -8.615850e-47 |
| Msa0123300 | Msa0811130 | 0.808496 | 3.010616e-50 | -8.615850e-47 |
| Msa0130240 | Msa0811130 | 0.802236 | 6.175166e-49 | -8.615850e-47 |
| Msa0131330 | Msa0811130 | 0.801908 | 7.210116e-49 | -8.615850e-47 |
| Msa0133720 | Msa0811130 | 0.844732 | 6.299426e-59 | -8.615850e-47 |
| Msa0133820 | Msa0811130 | 0.836183 | 1.086714e-56 | -8.615850e-47 |
| Msa0142460 | Msa0811130 | 0.805844 | 1.097233e-49 | -8.615850e-47 |
| Msa0143850 | Msa0811130 | 0.816365 | 5.742626e-52 | -8.615850e-47 |
| Msa0145110 | Msa0811130 | 0.805694 | 1.179686e-49 | -8.615850e-47 |
| Msa0149300 | Msa0811130 | 0.824740 | 6.852380e-54 | -8.615850e-47 |
| Msa0152400 | Msa0811130 | 0.818776 | 1.642595e-52 | -8.615850e-47 |
| Msa0154440 | Msa0811130 | 0.818347 | 2.055677e-52 | -8.615850e-47 |
| Msa0160670 | Msa0811130 | 0.820507 | 6.613323e-53 | -8.615850e-47 |
| Msa0178510 | Msa0811130 | 0.844125 | 9.175850e-59 | -8.615850e-47 |
| Msa0181230 | Msa0811130 | 0.831905 | 1.280761e-55 | -8.615850e-47 |
| Msa0186950 | Msa0811130 | 0.810941 | 8.971007e-51 | -8.615850e-47 |
| Msa0187030 | Msa0811130 | 0.838887 | 2.201692e-57 | -8.615850e-47 |
| Msa0188150 | Msa0811130 | 0.816963 | 4.217536e-52 | -8.615850e-47 |
| Msa0191890 | Msa0811130 | 0.818723 | 1.688720e-52 | -8.615850e-47 |
| Msa0204840 | Msa0811130 | 0.804600 | 1.998378e-49 | -8.615850e-47 |
| Msa0207350 | Msa0811130 | 0.827763 | 1.307516e-54 | -8.615850e-47 |
| Msa0212040 | Msa0811130 | 0.825146 | 5.495877e-54 | -8.615850e-47 |
| Msa0213520 | Msa0811130 | 0.802619 | 5.148111e-49 | -8.615850e-47 |
| Msa0215590 | Msa0811130 | 0.803573 | 3.268486e-49 | -8.615850e-47 |
| Msa0217700 | Msa0811130 | 0.804951 | 1.688491e-49 | -8.615850e-47 |
| Msa0225220 | Msa0811130 | 0.803558 | 3.291760e-49 | -8.615850e-47 |
| Msa0230370 | Msa0811130 | 0.815232 | 1.027153e-51 | -8.615850e-47 |
| Msa0236070 | Msa0811130 | 0.809109 | 2.225941e-50 | -8.615850e-47 |
| Msa0369850 | Msa0811130 | 0.806868 | 6.675185e-50 | -8.615850e-47 |
| Msa0392200 | Msa0811130 | 0.812277 | 4.596057e-51 | -8.615850e-47 |
| Msa0394690 | Msa0811130 | 0.803525 | 3.344984e-49 | -8.615850e-47 |
| Msa0397820 | Msa0811130 | 0.820723 | 5.901079e-53 | -8.615850e-47 |
| Msa0398240 | Msa0811130 | 0.805323 | 1.411042e-49 | -8.615850e-47 |
| Msa0405130 | Msa0811130 | 0.802753 | 4.829527e-49 | -8.615850e-47 |
| Msa0422280 | Msa0811130 | 0.801774 | 7.683726e-49 | -8.615850e-47 |
| Msa0428050 | Msa0811130 | 0.819868 | 9.263784e-53 | -8.615850e-47 |
| Msa0432160 | Msa0811130 | 0.812998 | 3.196489e-51 | -8.615850e-47 |
| Msa0432670 | Msa0811130 | 0.813859 | 2.067969e-51 | -8.615850e-47 |
| Msa0436370 | Msa0811130 | 0.814742 | 1.319508e-51 | -8.615850e-47 |
| Msa0467100 | Msa0811130 | 0.812447 | 4.220714e-51 | -8.615850e-47 |
| Msa0467430 | Msa0811130 | 0.816835 | 4.505507e-52 | -8.615850e-47 |
| Msa0468320 | Msa0811130 | 0.800095 | 1.692681e-48 | -8.615850e-47 |
| Msa0468410 | Msa0811130 | 0.811226 | 7.783370e-51 | -8.615850e-47 |
| Msa0468800 | Msa0811130 | 0.819318 | 1.236646e-52 | -8.615850e-47 |
| Msa0473980 | Msa0811130 | 0.802231 | 6.188171e-49 | -8.615850e-47 |
| Msa0476680 | Msa0811130 | 0.806747 | 7.079348e-50 | -8.615850e-47 |
| Msa0479170 | Msa0811130 | 0.803702 | 3.072838e-49 | -8.615850e-47 |
| Msa0479200 | Msa0811130 | 0.803267 | 3.782679e-49 | -8.615850e-47 |
| Msa0480780 | Msa0811130 | 0.803893 | 2.804327e-49 | -8.615850e-47 |
| Msa0241140 | Msa0811130 | 0.802113 | 6.544628e-49 | -8.615850e-47 |
| Msa0252540 | Msa0811130 | 0.804904 | 1.726726e-49 | -8.615850e-47 |
| Msa0253290 | Msa0811130 | 0.807749 | 4.340710e-50 | -8.615850e-47 |
| Msa0254790 | Msa0811130 | 0.821888 | 3.177154e-53 | -8.615850e-47 |
| Msa0264780 | Msa0811130 | 0.810064 | 1.388230e-50 | -8.615850e-47 |
| Msa0276920 | Msa0811130 | 0.828792 | 7.384075e-55 | -8.615850e-47 |
| Msa0294060 | Msa0811130 | 0.820645 | 6.148373e-53 | -8.615850e-47 |
| Msa0300270 | Msa0811130 | 0.805526 | 1.279256e-49 | -8.615850e-47 |
| Msa0300320 | Msa0811130 | 0.816226 | 6.167598e-52 | -8.615850e-47 |
| Msa0311610 | Msa0811130 | 0.810700 | 1.011685e-50 | -8.615850e-47 |
| Msa0312530 | Msa0811130 | 0.823078 | 1.681371e-53 | -8.615850e-47 |
| Msa0317510 | Msa0811130 | 0.806295 | 8.818791e-50 | -8.615850e-47 |
| Msa0317730 | Msa0811130 | 0.823797 | 1.141707e-53 | -8.615850e-47 |
| Msa0317740 | Msa0811130 | 0.805496 | 1.297922e-49 | -8.615850e-47 |
| Msa0318720 | Msa0811130 | 0.809117 | 2.216739e-50 | -8.615850e-47 |
| Msa0322680 | Msa0811130 | 0.808235 | 3.421208e-50 | -8.615850e-47 |
| Msa0328070 | Msa0811130 | 0.828379 | 9.288905e-55 | -8.615850e-47 |
| Msa0333600 | Msa0811130 | 0.839496 | 1.530483e-57 | -8.615850e-47 |
| Msa0333650 | Msa0811130 | 0.805121 | 1.555533e-49 | -8.615850e-47 |
| Msa0341540 | Msa0811130 | 0.800743 | 1.249011e-48 | -8.615850e-47 |
| Msa0342010 | Msa0811130 | 0.828013 | 1.138073e-54 | -8.615850e-47 |
| Msa0346990 | Msa0811130 | 0.802697 | 4.961208e-49 | -8.615850e-47 |
| Msa0347950 | Msa0811130 | 0.809984 | 1.444025e-50 | -8.615850e-47 |
| Msa0347990 | Msa0811130 | 0.813706 | 2.234926e-51 | -8.615850e-47 |
| Msa0351380 | Msa0811130 | 0.807917 | 3.999337e-50 | -8.615850e-47 |
| Msa0357020 | Msa0811130 | 0.803721 | 3.045446e-49 | -8.615850e-47 |
| Msa0484780 | Msa0811130 | 0.813111 | 3.019860e-51 | -8.615850e-47 |
| Msa0487780 | Msa0811130 | 0.822107 | 2.827831e-53 | -8.615850e-47 |
| Msa0498450 | Msa0811130 | 0.826296 | 2.932708e-54 | -8.615850e-47 |
| Msa0503060 | Msa0811130 | 0.806273 | 8.910286e-50 | -8.615850e-47 |
| Msa0506790 | Msa0811130 | 0.812277 | 4.596729e-51 | -8.615850e-47 |
| Msa0506860 | Msa0811130 | 0.800657 | 1.300488e-48 | -8.615850e-47 |
| Msa0512870 | Msa0811130 | 0.816472 | 5.432725e-52 | -8.615850e-47 |
| Msa0514470 | Msa0811130 | 0.800307 | 1.532239e-48 | -8.615850e-47 |
| Msa0517090 | Msa0811130 | 0.812533 | 4.042493e-51 | -8.615850e-47 |
| Msa0518380 | Msa0811130 | 0.814720 | 1.334375e-51 | -8.615850e-47 |
| Msa0518440 | Msa0811130 | 0.806517 | 7.916731e-50 | -8.615850e-47 |
| Msa0521010 | Msa0811130 | 0.802858 | 4.594409e-49 | -8.615850e-47 |
| Msa0526940 | Msa0811130 | 0.806956 | 6.392574e-50 | -8.615850e-47 |
| Msa0532980 | Msa0811130 | 0.806774 | 6.986519e-50 | -8.615850e-47 |
| Msa0544660 | Msa0811130 | 0.801698 | 7.964727e-49 | -8.615850e-47 |
| Msa0559500 | Msa0811130 | 0.800415 | 1.456964e-48 | -8.615850e-47 |
| Msa0574390 | Msa0811130 | 0.829546 | 4.847018e-55 | -8.615850e-47 |
| Msa0576680 | Msa0811130 | 0.835483 | 1.634544e-56 | -8.615850e-47 |
| Msa0579660 | Msa0811130 | 0.829816 | 4.165843e-55 | -8.615850e-47 |
| Msa0584550 | Msa0811130 | 0.817290 | 3.561420e-52 | -8.615850e-47 |
| Msa0585920 | Msa0811130 | 0.805182 | 1.510516e-49 | -8.615850e-47 |
| Msa0592080 | Msa0811130 | 0.802214 | 6.237919e-49 | -8.615850e-47 |
| Msa0598160 | Msa0811130 | 0.801637 | 8.194856e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0811130 | MtrunA17_Chr4g0059521 | 90.230 | 174 | 6 | 1 | 3 | 176 | 341 | 503 | 1.66e-108 | 318 |
| Msa0811130 | MtrunA17_Chr3g0118121 | 75.862 | 174 | 31 | 1 | 3 | 176 | 341 | 503 | 2.95e-92 | 277 |
| Msa0811130 | MtrunA17_Chr3g0118081 | 74.138 | 174 | 34 | 1 | 3 | 176 | 371 | 533 | 7.72e-89 | 269 |
| Msa0811130 | MtrunA17_Chr6g0485301 | 39.394 | 165 | 87 | 2 | 3 | 167 | 350 | 501 | 2.28e-37 | 134 |
| Msa0811130 | MtrunA17_Chr8g0390631 | 38.788 | 165 | 88 | 2 | 3 | 167 | 342 | 493 | 3.80e-36 | 130 |
| Msa0811130 | MtrunA17_Chr6g0485311 | 38.788 | 165 | 88 | 2 | 3 | 167 | 348 | 499 | 6.43e-36 | 130 |
| Msa0811130 | MtrunA17_Chr8g0390651 | 38.182 | 165 | 89 | 2 | 3 | 167 | 351 | 502 | 9.40e-36 | 130 |
| Msa0811130 | MtrunA17_Chr8g0365221 | 38.788 | 165 | 88 | 2 | 3 | 167 | 389 | 540 | 1.26e-31 | 119 |
| Msa0811130 | MtrunA17_Chr3g0117861 | 38.788 | 165 | 88 | 2 | 3 | 167 | 390 | 541 | 9.47e-31 | 116 |
| Msa0811130 | MtrunA17_Chr4g0059221 | 36.970 | 165 | 91 | 2 | 3 | 167 | 392 | 543 | 6.61e-29 | 111 |
| Msa0811130 | MtrunA17_Chr2g0310091 | 43.750 | 128 | 70 | 1 | 5 | 132 | 389 | 514 | 2.63e-26 | 104 |
| Msa0811130 | MtrunA17_Chr2g0294411 | 34.810 | 158 | 85 | 5 | 5 | 149 | 381 | 533 | 2.59e-19 | 84.3 |
| Msa0811130 | MtrunA17_Chr2g0279751 | 34.286 | 105 | 61 | 3 | 5 | 106 | 340 | 439 | 1.04e-11 | 62.4 |
| Msa0811130 | MtrunA17_Chr8g0372381 | 32.520 | 123 | 78 | 2 | 18 | 138 | 310 | 429 | 1.06e-11 | 62.4 |
| Msa0811130 | MtrunA17_Chr4g0049641 | 30.973 | 113 | 74 | 2 | 5 | 114 | 367 | 478 | 3.26e-11 | 60.8 |
| Msa0811130 | MtrunA17_Chr4g0074171 | 31.452 | 124 | 79 | 2 | 10 | 132 | 351 | 469 | 5.09e-11 | 60.5 |
| Msa0811130 | MtrunA17_Chr2g0300801 | 36.029 | 136 | 75 | 5 | 5 | 134 | 350 | 479 | 5.13e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0811130 | AT1G74920.2 | 75.439 | 171 | 31 | 1 | 3 | 173 | 336 | 495 | 4.23e-91 | 274 |
| Msa0811130 | AT1G74920.1 | 75.439 | 171 | 31 | 1 | 3 | 173 | 341 | 500 | 5.11e-91 | 274 |
| Msa0811130 | AT3G48170.1 | 72.989 | 174 | 36 | 1 | 3 | 176 | 341 | 503 | 1.34e-90 | 273 |
| Msa0811130 | AT3G24503.1 | 41.818 | 165 | 83 | 2 | 3 | 167 | 349 | 500 | 8.60e-38 | 135 |
| Msa0811130 | AT1G23800.1 | 35.758 | 165 | 93 | 2 | 3 | 167 | 382 | 533 | 3.42e-30 | 115 |
| Msa0811130 | AT3G48000.1 | 35.928 | 167 | 94 | 2 | 1 | 167 | 384 | 537 | 1.71e-29 | 113 |
| Msa0811130 | AT1G79440.1 | 46.094 | 128 | 67 | 1 | 5 | 132 | 380 | 505 | 3.01e-27 | 107 |
| Msa0811130 | AT3G66658.1 | 35.220 | 159 | 83 | 6 | 5 | 149 | 381 | 533 | 1.11e-19 | 85.9 |
| Msa0811130 | AT3G66658.2 | 35.443 | 158 | 84 | 5 | 5 | 149 | 381 | 533 | 1.12e-19 | 85.9 |
| Msa0811130 | AT2G14170.2 | 32.743 | 113 | 72 | 2 | 5 | 114 | 330 | 441 | 2.21e-12 | 64.7 |
| Msa0811130 | AT2G14170.1 | 32.743 | 113 | 72 | 2 | 5 | 114 | 439 | 550 | 2.31e-12 | 64.7 |
| Msa0811130 | AT2G14170.3 | 32.743 | 113 | 72 | 2 | 5 | 114 | 439 | 550 | 2.43e-12 | 64.7 |
| Msa0811130 | AT1G54100.2 | 34.074 | 135 | 80 | 4 | 3 | 134 | 350 | 478 | 3.30e-11 | 61.2 |
| Msa0811130 | AT1G54100.1 | 34.074 | 135 | 80 | 4 | 3 | 134 | 350 | 478 | 3.30e-11 | 61.2 |
Find 33 sgRNAs with CRISPR-Local
Find 182 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCTCTGATGCAGGCATTTA+AGG | 0.134214 | 5_3:+40297572 | Msa0811130:intron |
| ATTTGGAAAGAAGAAGTATT+TGG | 0.232708 | 5_3:+40297250 | Msa0811130:CDS |
| TGACTACTTCCATGCAAATT+TGG | 0.235483 | 5_3:+40297233 | Msa0811130:CDS |
| GGCATTAAACGTAGTGGTTT+TGG | 0.252055 | 5_3:+40297651 | Msa0811130:CDS |
| CATTTAAGGCCGAAATAGTA+TGG | 0.301924 | 5_3:+40297586 | Msa0811130:CDS |
| GCAATTGACCCATACTATTT+CGG | 0.370412 | 5_3:-40297595 | None:intergenic |
| ATGCTTCACTCAAGCGCCAT+GGG | 0.461661 | 5_3:+40297626 | Msa0811130:CDS |
| GTCCTCTACAGCTATGGCTT+AGG | 0.463601 | 5_3:+40297428 | Msa0811130:intron |
| GTCACATCAGTTATGATGGT+TGG | 0.495328 | 5_3:-40297214 | None:intergenic |
| TTCTTCTTTCCAAATTTGCA+TGG | 0.496084 | 5_3:-40297242 | None:intergenic |
| CAATGGCAGCATCTAAAGAA+AGG | 0.502314 | 5_3:+40297178 | Msa0811130:intron |
| AAGATGTGAGCGTGTAACTA+AGG | 0.508552 | 5_3:+40297478 | Msa0811130:CDS |
| CATGCTTCACTCAAGCGCCA+TGG | 0.516509 | 5_3:+40297625 | Msa0811130:CDS |
| GTACATCTCTGATGAACCAT+GGG | 0.525895 | 5_3:+40298236 | Msa0811130:CDS |
| AGTAGTCACATCAGTTATGA+TGG | 0.526637 | 5_3:-40297218 | None:intergenic |
| CATACCATTCTCCTAGTTCA+CGG | 0.538382 | 5_3:-40297674 | None:intergenic |
| ATGATCACTACACTGTCAGC+AGG | 0.540679 | 5_3:-40297860 | None:intergenic |
| TTGGCCGTGAACTAGGAGAA+TGG | 0.556599 | 5_3:+40297670 | Msa0811130:CDS |
| GACTGGTGGGTCTCGACCAG+AGG | 0.561492 | 5_3:+40297075 | Msa0811130:CDS |
| TTCACTCAAGCGCCATGGGG+AGG | 0.564185 | 5_3:+40297630 | Msa0811130:CDS |
| GTCTCGAACGCTAAGAGTGA+GGG | 0.574738 | 5_3:+40297040 | Msa0811130:CDS |
| TAGATCAATAGCTTCTTCCT+CGG | 0.596377 | 5_3:-40297302 | None:intergenic |
| GGAGGTTGGTACCATCCCCA+TGG | 0.607677 | 5_3:-40298252 | None:intergenic |
| TGTCTCGAACGCTAAGAGTG+AGG | 0.614021 | 5_3:+40297039 | Msa0811130:CDS |
| AGTACATCTCTGATGAACCA+TGG | 0.616407 | 5_3:+40298235 | Msa0811130:CDS |
| ATTTAAGGCCGAAATAGTAT+GGG | 0.622761 | 5_3:+40297587 | Msa0811130:CDS |
| TGGGGAGGCATTAAACGTAG+TGG | 0.638861 | 5_3:+40297645 | Msa0811130:CDS |
| CTACGTTTAATGCCTCCCCA+TGG | 0.639138 | 5_3:-40297642 | None:intergenic |
| CATGGCGCTTGAGTGAAGCA+TGG | 0.643282 | 5_3:-40297624 | None:intergenic |
| TGCTTCACTCAAGCGCCATG+GGG | 0.659834 | 5_3:+40297627 | Msa0811130:CDS |
| TGATCACTACACTGTCAGCA+GGG | 0.665760 | 5_3:-40297859 | None:intergenic |
| TCTCTGATGAACCATGGGGA+TGG | 0.668208 | 5_3:+40298241 | Msa0811130:CDS |
| TACATCTCTGATGAACCATG+GGG | 0.778050 | 5_3:+40298237 | Msa0811130:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGAAAAATAAATAAAAAGAT+AGG | - | chr5_3:40297743-40297762 | None:intergenic | 10.0% |
| !!! | TTTTGTTTAATATTTTTAAC+AGG | + | chr5_3:40298180-40298199 | Msa0811130:intron | 10.0% |
| !!! | TTTGTTTAATATTTTTAACA+GGG | + | chr5_3:40298181-40298200 | Msa0811130:intron | 10.0% |
| !! | AGAAAAATAAATAAAAAGAT+AGG | - | chr5_3:40297743-40297762 | None:intergenic | 10.0% |
| !!! | TTTTGTTTAATATTTTTAAC+AGG | + | chr5_3:40298180-40298199 | Msa0811130:intron | 10.0% |
| !!! | TTTGTTTAATATTTTTAACA+GGG | + | chr5_3:40298181-40298200 | Msa0811130:intron | 10.0% |
| !!! | TCTTTTTATTTATTTTTCTC+TGG | + | chr5_3:40297744-40297763 | Msa0811130:intron | 15.0% |
| !!! | TTGTTTAATATTTTTAACAG+GGG | + | chr5_3:40298182-40298201 | Msa0811130:intron | 15.0% |
| !!! | TCTTTTTATTTATTTTTCTC+TGG | + | chr5_3:40297744-40297763 | Msa0811130:intron | 15.0% |
| !!! | TTGTTTAATATTTTTAACAG+GGG | + | chr5_3:40298182-40298201 | Msa0811130:intron | 15.0% |
| !! | CAAAACATAATCAATTATCA+TGG | - | chr5_3:40297152-40297171 | None:intergenic | 20.0% |
| !! | CAAGAAAACAACTAAATAAT+TGG | + | chr5_3:40297521-40297540 | Msa0811130:intron | 20.0% |
| !! | AATAAAAAGATAGGCATTTA+AGG | - | chr5_3:40297734-40297753 | None:intergenic | 20.0% |
| !! | AAAAGAAACCCATAATTATA+AGG | + | chr5_3:40297798-40297817 | Msa0811130:intron | 20.0% |
| !! | AAATTGGAATTATACATGAT+AGG | + | chr5_3:40297965-40297984 | Msa0811130:intron | 20.0% |
| !! | AATTGGAATTATACATGATA+GGG | + | chr5_3:40297966-40297985 | Msa0811130:intron | 20.0% |
| !! | ATTAAACAAAATCAGACTTA+AGG | - | chr5_3:40298171-40298190 | None:intergenic | 20.0% |
| !! | CAAAACATAATCAATTATCA+TGG | - | chr5_3:40297152-40297171 | None:intergenic | 20.0% |
| !! | CAAGAAAACAACTAAATAAT+TGG | + | chr5_3:40297521-40297540 | Msa0811130:intron | 20.0% |
| !! | AATAAAAAGATAGGCATTTA+AGG | - | chr5_3:40297734-40297753 | None:intergenic | 20.0% |
| !! | AAAAGAAACCCATAATTATA+AGG | + | chr5_3:40297798-40297817 | Msa0811130:intron | 20.0% |
| !! | AAATTGGAATTATACATGAT+AGG | + | chr5_3:40297965-40297984 | Msa0811130:intron | 20.0% |
| !! | AATTGGAATTATACATGATA+GGG | + | chr5_3:40297966-40297985 | Msa0811130:intron | 20.0% |
| !! | ATTAAACAAAATCAGACTTA+AGG | - | chr5_3:40298171-40298190 | None:intergenic | 20.0% |
| !! | ATTATGTTTTGCAAATGCAA+TGG | + | chr5_3:40297161-40297180 | Msa0811130:intron | 25.0% |
| !!! | ATTTGGAAAGAAGAAGTATT+TGG | + | chr5_3:40297250-40297269 | Msa0811130:CDS | 25.0% |
| ! | GGTATCTAAGTTATATACTT+TGG | + | chr5_3:40297406-40297425 | Msa0811130:intron | 25.0% |
| ! | AGACTTCACCTTATAATTAT+GGG | - | chr5_3:40297809-40297828 | None:intergenic | 25.0% |
| ! | TAGACTTCACCTTATAATTA+TGG | - | chr5_3:40297810-40297829 | None:intergenic | 25.0% |
| !! | ATTATGTTTTGCAAATGCAA+TGG | + | chr5_3:40297161-40297180 | Msa0811130:intron | 25.0% |
| !!! | ATTTGGAAAGAAGAAGTATT+TGG | + | chr5_3:40297250-40297269 | Msa0811130:CDS | 25.0% |
| ! | GGTATCTAAGTTATATACTT+TGG | + | chr5_3:40297406-40297425 | Msa0811130:intron | 25.0% |
| ! | AGACTTCACCTTATAATTAT+GGG | - | chr5_3:40297809-40297828 | None:intergenic | 25.0% |
| ! | TAGACTTCACCTTATAATTA+TGG | - | chr5_3:40297810-40297829 | None:intergenic | 25.0% |
| TTCTTCTTTCCAAATTTGCA+TGG | - | chr5_3:40297245-40297264 | None:intergenic | 30.0% | |
| ! | AAAGTTTTTACACACAGAAC+AGG | - | chr5_3:40297277-40297296 | None:intergenic | 30.0% |
| ! | TGTAAAAACTTTTAACACCG+AGG | + | chr5_3:40297285-40297304 | Msa0811130:CDS | 30.0% |
| ! | TTCATCTGTATACTCTTTTC+CGG | + | chr5_3:40297370-40297389 | Msa0811130:intron | 30.0% |
| ! | ATTTAAGGCCGAAATAGTAT+GGG | + | chr5_3:40297587-40297606 | Msa0811130:CDS | 30.0% |
| !! | TTATTTTTCTCTGGATGAAG+AGG | + | chr5_3:40297753-40297772 | Msa0811130:intron | 30.0% |
| ACAGTCAATAAAGCTATGAA+CGG | + | chr5_3:40297911-40297930 | Msa0811130:intron | 30.0% | |
| ! | AATTCCAATTTTACCATGCA+AGG | - | chr5_3:40297956-40297975 | None:intergenic | 30.0% |
| TCTGACATTAATACAGGTTT+AGG | - | chr5_3:40298103-40298122 | None:intergenic | 30.0% | |
| !! | GATACATATCATAGTTTTGC+AGG | - | chr5_3:40298276-40298295 | None:intergenic | 30.0% |
| TTCTTCTTTCCAAATTTGCA+TGG | - | chr5_3:40297245-40297264 | None:intergenic | 30.0% | |
| ! | AAAGTTTTTACACACAGAAC+AGG | - | chr5_3:40297277-40297296 | None:intergenic | 30.0% |
| ! | TGTAAAAACTTTTAACACCG+AGG | + | chr5_3:40297285-40297304 | Msa0811130:CDS | 30.0% |
| ! | TTCATCTGTATACTCTTTTC+CGG | + | chr5_3:40297370-40297389 | Msa0811130:intron | 30.0% |
| ! | ATTTAAGGCCGAAATAGTAT+GGG | + | chr5_3:40297587-40297606 | Msa0811130:CDS | 30.0% |
| !! | TTATTTTTCTCTGGATGAAG+AGG | + | chr5_3:40297753-40297772 | Msa0811130:intron | 30.0% |
| ACAGTCAATAAAGCTATGAA+CGG | + | chr5_3:40297911-40297930 | Msa0811130:intron | 30.0% | |
| ! | AATTCCAATTTTACCATGCA+AGG | - | chr5_3:40297956-40297975 | None:intergenic | 30.0% |
| TCTGACATTAATACAGGTTT+AGG | - | chr5_3:40298103-40298122 | None:intergenic | 30.0% | |
| !! | GATACATATCATAGTTTTGC+AGG | - | chr5_3:40298276-40298295 | None:intergenic | 30.0% |
| ! | AGAAAGCATAATCATACCTC+TGG | - | chr5_3:40297094-40297113 | None:intergenic | 35.0% |
| AGTAGTCACATCAGTTATGA+TGG | - | chr5_3:40297221-40297240 | None:intergenic | 35.0% | |
| TGACTACTTCCATGCAAATT+TGG | + | chr5_3:40297233-40297252 | Msa0811130:CDS | 35.0% | |
| TAGATCAATAGCTTCTTCCT+CGG | - | chr5_3:40297305-40297324 | None:intergenic | 35.0% | |
| ACTAAGGTGAGACTGATTAT+AGG | + | chr5_3:40297494-40297513 | Msa0811130:intron | 35.0% | |
| ! | CATTTAAGGCCGAAATAGTA+TGG | + | chr5_3:40297586-40297605 | Msa0811130:CDS | 35.0% |
| GCAATTGACCCATACTATTT+CGG | - | chr5_3:40297598-40297617 | None:intergenic | 35.0% | |
| ATAAAGCTATGAACGGATCA+TGG | + | chr5_3:40297918-40297937 | Msa0811130:intron | 35.0% | |
| CATTCCTTGCATGGTAAAAT+TGG | + | chr5_3:40297949-40297968 | Msa0811130:intron | 35.0% | |
| TGATAGGGATTAACATGTGT+CGG | + | chr5_3:40297981-40298000 | Msa0811130:intron | 35.0% | |
| ATGTTTCCTTGGTCTGAATT+TGG | + | chr5_3:40298013-40298032 | Msa0811130:intron | 35.0% | |
| TTTATGCCAAATTCAGACCA+AGG | - | chr5_3:40298022-40298041 | None:intergenic | 35.0% | |
| TTGGTCTGAATTTGGCATAA+AGG | + | chr5_3:40298021-40298040 | Msa0811130:intron | 35.0% | |
| TGGTCTGAATTTGGCATAAA+GGG | + | chr5_3:40298022-40298041 | Msa0811130:intron | 35.0% | |
| ATTTGGCATAAAGGGATAGT+TGG | + | chr5_3:40298030-40298049 | Msa0811130:intron | 35.0% | |
| CATAAAGGGATAGTTGGATT+GGG | + | chr5_3:40298036-40298055 | Msa0811130:intron | 35.0% | |
| ACCTGTATTAATGTCAGATC+TGG | + | chr5_3:40298105-40298124 | Msa0811130:intron | 35.0% | |
| GACTTAAGGTCAAATAAGAC+AGG | - | chr5_3:40298157-40298176 | None:intergenic | 35.0% | |
| !! | ACATATCATAGTTTTGCAGG+AGG | - | chr5_3:40298273-40298292 | None:intergenic | 35.0% |
| ! | AGAAAGCATAATCATACCTC+TGG | - | chr5_3:40297094-40297113 | None:intergenic | 35.0% |
| AGTAGTCACATCAGTTATGA+TGG | - | chr5_3:40297221-40297240 | None:intergenic | 35.0% | |
| TGACTACTTCCATGCAAATT+TGG | + | chr5_3:40297233-40297252 | Msa0811130:CDS | 35.0% | |
| TAGATCAATAGCTTCTTCCT+CGG | - | chr5_3:40297305-40297324 | None:intergenic | 35.0% | |
| ACTAAGGTGAGACTGATTAT+AGG | + | chr5_3:40297494-40297513 | Msa0811130:intron | 35.0% | |
| ! | CATTTAAGGCCGAAATAGTA+TGG | + | chr5_3:40297586-40297605 | Msa0811130:CDS | 35.0% |
| GCAATTGACCCATACTATTT+CGG | - | chr5_3:40297598-40297617 | None:intergenic | 35.0% | |
| ATAAAGCTATGAACGGATCA+TGG | + | chr5_3:40297918-40297937 | Msa0811130:intron | 35.0% | |
| CATTCCTTGCATGGTAAAAT+TGG | + | chr5_3:40297949-40297968 | Msa0811130:intron | 35.0% | |
| TGATAGGGATTAACATGTGT+CGG | + | chr5_3:40297981-40298000 | Msa0811130:intron | 35.0% | |
| ATGTTTCCTTGGTCTGAATT+TGG | + | chr5_3:40298013-40298032 | Msa0811130:intron | 35.0% | |
| TTTATGCCAAATTCAGACCA+AGG | - | chr5_3:40298022-40298041 | None:intergenic | 35.0% | |
| TTGGTCTGAATTTGGCATAA+AGG | + | chr5_3:40298021-40298040 | Msa0811130:intron | 35.0% | |
| TGGTCTGAATTTGGCATAAA+GGG | + | chr5_3:40298022-40298041 | Msa0811130:intron | 35.0% | |
| ATTTGGCATAAAGGGATAGT+TGG | + | chr5_3:40298030-40298049 | Msa0811130:intron | 35.0% | |
| CATAAAGGGATAGTTGGATT+GGG | + | chr5_3:40298036-40298055 | Msa0811130:intron | 35.0% | |
| ACCTGTATTAATGTCAGATC+TGG | + | chr5_3:40298105-40298124 | Msa0811130:intron | 35.0% | |
| GACTTAAGGTCAAATAAGAC+AGG | - | chr5_3:40298157-40298176 | None:intergenic | 35.0% | |
| !! | ACATATCATAGTTTTGCAGG+AGG | - | chr5_3:40298273-40298292 | None:intergenic | 35.0% |
| CAATGGCAGCATCTAAAGAA+AGG | + | chr5_3:40297178-40297197 | Msa0811130:intron | 40.0% | |
| GTCACATCAGTTATGATGGT+TGG | - | chr5_3:40297217-40297236 | None:intergenic | 40.0% | |
| ! | TACTCTTTTCCGGTCATTTG+TGG | + | chr5_3:40297380-40297399 | Msa0811130:intron | 40.0% |
| ! | TTTTCCGGTCATTTGTGGAA+TGG | + | chr5_3:40297385-40297404 | Msa0811130:intron | 40.0% |
| GATACCATTCCACAAATGAC+CGG | - | chr5_3:40297392-40297411 | None:intergenic | 40.0% | |
| AAGATGTGAGCGTGTAACTA+AGG | + | chr5_3:40297478-40297497 | Msa0811130:CDS | 40.0% | |
| AGTTTATCTTGCTCTGATGC+AGG | + | chr5_3:40297563-40297582 | Msa0811130:intron | 40.0% | |
| ! | GGCATTAAACGTAGTGGTTT+TGG | + | chr5_3:40297651-40297670 | Msa0811130:CDS | 40.0% |
| CATACCATTCTCCTAGTTCA+CGG | - | chr5_3:40297677-40297696 | None:intergenic | 40.0% | |
| TAAGGTGAAGTCTAAGTCTG+TGG | + | chr5_3:40297816-40297835 | Msa0811130:intron | 40.0% | |
| GCATAAAGGGATAGTTGGAT+TGG | + | chr5_3:40298035-40298054 | Msa0811130:intron | 40.0% | |
| GCCAGATCTGACATTAATAC+AGG | - | chr5_3:40298109-40298128 | None:intergenic | 40.0% | |
| TATTAATGTCAGATCTGGCG+TGG | + | chr5_3:40298110-40298129 | Msa0811130:intron | 40.0% | |
| ATTAATGTCAGATCTGGCGT+GGG | + | chr5_3:40298111-40298130 | Msa0811130:intron | 40.0% | |
| AGTACATCTCTGATGAACCA+TGG | + | chr5_3:40298235-40298254 | Msa0811130:CDS | 40.0% | |
| GTACATCTCTGATGAACCAT+GGG | + | chr5_3:40298236-40298255 | Msa0811130:CDS | 40.0% | |
| TACATCTCTGATGAACCATG+GGG | + | chr5_3:40298237-40298256 | Msa0811130:CDS | 40.0% | |
| !! | ATCATAGTTTTGCAGGAGGT+TGG | - | chr5_3:40298269-40298288 | None:intergenic | 40.0% |
| CAATGGCAGCATCTAAAGAA+AGG | + | chr5_3:40297178-40297197 | Msa0811130:intron | 40.0% | |
| GTCACATCAGTTATGATGGT+TGG | - | chr5_3:40297217-40297236 | None:intergenic | 40.0% | |
| ! | TACTCTTTTCCGGTCATTTG+TGG | + | chr5_3:40297380-40297399 | Msa0811130:intron | 40.0% |
| ! | TTTTCCGGTCATTTGTGGAA+TGG | + | chr5_3:40297385-40297404 | Msa0811130:intron | 40.0% |
| GATACCATTCCACAAATGAC+CGG | - | chr5_3:40297392-40297411 | None:intergenic | 40.0% | |
| AAGATGTGAGCGTGTAACTA+AGG | + | chr5_3:40297478-40297497 | Msa0811130:CDS | 40.0% | |
| AGTTTATCTTGCTCTGATGC+AGG | + | chr5_3:40297563-40297582 | Msa0811130:intron | 40.0% | |
| ! | GGCATTAAACGTAGTGGTTT+TGG | + | chr5_3:40297651-40297670 | Msa0811130:CDS | 40.0% |
| CATACCATTCTCCTAGTTCA+CGG | - | chr5_3:40297677-40297696 | None:intergenic | 40.0% | |
| TAAGGTGAAGTCTAAGTCTG+TGG | + | chr5_3:40297816-40297835 | Msa0811130:intron | 40.0% | |
| GCATAAAGGGATAGTTGGAT+TGG | + | chr5_3:40298035-40298054 | Msa0811130:intron | 40.0% | |
| GCCAGATCTGACATTAATAC+AGG | - | chr5_3:40298109-40298128 | None:intergenic | 40.0% | |
| TATTAATGTCAGATCTGGCG+TGG | + | chr5_3:40298110-40298129 | Msa0811130:intron | 40.0% | |
| ATTAATGTCAGATCTGGCGT+GGG | + | chr5_3:40298111-40298130 | Msa0811130:intron | 40.0% | |
| AGTACATCTCTGATGAACCA+TGG | + | chr5_3:40298235-40298254 | Msa0811130:CDS | 40.0% | |
| GTACATCTCTGATGAACCAT+GGG | + | chr5_3:40298236-40298255 | Msa0811130:CDS | 40.0% | |
| TACATCTCTGATGAACCATG+GGG | + | chr5_3:40298237-40298256 | Msa0811130:CDS | 40.0% | |
| !! | ATCATAGTTTTGCAGGAGGT+TGG | - | chr5_3:40298269-40298288 | None:intergenic | 40.0% |
| !!! | GTGCGACAATTTTGACTGGT+GGG | + | chr5_3:40297062-40297081 | Msa0811130:CDS | 45.0% |
| CTGTGCAAGTGTGTTCAGTT+AGG | + | chr5_3:40297112-40297131 | Msa0811130:intron | 45.0% | |
| ACTTTGGTCCTCTACAGCTA+TGG | + | chr5_3:40297422-40297441 | Msa0811130:intron | 45.0% | |
| TGCTCTGATGCAGGCATTTA+AGG | + | chr5_3:40297572-40297591 | Msa0811130:intron | 45.0% | |
| TGATCACTACACTGTCAGCA+GGG | - | chr5_3:40297862-40297881 | None:intergenic | 45.0% | |
| ATGATCACTACACTGTCAGC+AGG | - | chr5_3:40297863-40297882 | None:intergenic | 45.0% | |
| GGCACATTTGCATGTTTCCT+TGG | + | chr5_3:40298002-40298021 | Msa0811130:intron | 45.0% | |
| !!! | GTGCGACAATTTTGACTGGT+GGG | + | chr5_3:40297062-40297081 | Msa0811130:CDS | 45.0% |
| CTGTGCAAGTGTGTTCAGTT+AGG | + | chr5_3:40297112-40297131 | Msa0811130:intron | 45.0% | |
| ACTTTGGTCCTCTACAGCTA+TGG | + | chr5_3:40297422-40297441 | Msa0811130:intron | 45.0% | |
| TGCTCTGATGCAGGCATTTA+AGG | + | chr5_3:40297572-40297591 | Msa0811130:intron | 45.0% | |
| TGATCACTACACTGTCAGCA+GGG | - | chr5_3:40297862-40297881 | None:intergenic | 45.0% | |
| ATGATCACTACACTGTCAGC+AGG | - | chr5_3:40297863-40297882 | None:intergenic | 45.0% | |
| GGCACATTTGCATGTTTCCT+TGG | + | chr5_3:40298002-40298021 | Msa0811130:intron | 45.0% | |
| TGTCTCGAACGCTAAGAGTG+AGG | + | chr5_3:40297039-40297058 | Msa0811130:CDS | 50.0% | |
| GTCTCGAACGCTAAGAGTGA+GGG | + | chr5_3:40297040-40297059 | Msa0811130:CDS | 50.0% | |
| !! | GAGGGTGCGACAATTTTGAC+TGG | + | chr5_3:40297058-40297077 | Msa0811130:CDS | 50.0% |
| !!! | GGTGCGACAATTTTGACTGG+TGG | + | chr5_3:40297061-40297080 | Msa0811130:CDS | 50.0% |
| GTCCTCTACAGCTATGGCTT+AGG | + | chr5_3:40297428-40297447 | Msa0811130:intron | 50.0% | |
| CACCTAAGCCATAGCTGTAG+AGG | - | chr5_3:40297433-40297452 | None:intergenic | 50.0% | |
| ATGCTTCACTCAAGCGCCAT+GGG | + | chr5_3:40297626-40297645 | Msa0811130:CDS | 50.0% | |
| CTACGTTTAATGCCTCCCCA+TGG | - | chr5_3:40297645-40297664 | None:intergenic | 50.0% | |
| !! | TGGGGAGGCATTAAACGTAG+TGG | + | chr5_3:40297645-40297664 | Msa0811130:CDS | 50.0% |
| !!! | AGTGGTTTTGGCCGTGAACT+AGG | + | chr5_3:40297663-40297682 | Msa0811130:CDS | 50.0% |
| TTGGCCGTGAACTAGGAGAA+TGG | + | chr5_3:40297670-40297689 | Msa0811130:CDS | 50.0% | |
| CTATGAACGGATCATGGCAC+TGG | + | chr5_3:40297924-40297943 | Msa0811130:intron | 50.0% | |
| TCTCTGATGAACCATGGGGA+TGG | + | chr5_3:40298241-40298260 | Msa0811130:CDS | 50.0% | |
| TGTCTCGAACGCTAAGAGTG+AGG | + | chr5_3:40297039-40297058 | Msa0811130:CDS | 50.0% | |
| GTCTCGAACGCTAAGAGTGA+GGG | + | chr5_3:40297040-40297059 | Msa0811130:CDS | 50.0% | |
| !! | GAGGGTGCGACAATTTTGAC+TGG | + | chr5_3:40297058-40297077 | Msa0811130:CDS | 50.0% |
| !!! | GGTGCGACAATTTTGACTGG+TGG | + | chr5_3:40297061-40297080 | Msa0811130:CDS | 50.0% |
| GTCCTCTACAGCTATGGCTT+AGG | + | chr5_3:40297428-40297447 | Msa0811130:intron | 50.0% | |
| CACCTAAGCCATAGCTGTAG+AGG | - | chr5_3:40297433-40297452 | None:intergenic | 50.0% | |
| ATGCTTCACTCAAGCGCCAT+GGG | + | chr5_3:40297626-40297645 | Msa0811130:CDS | 50.0% | |
| CTACGTTTAATGCCTCCCCA+TGG | - | chr5_3:40297645-40297664 | None:intergenic | 50.0% | |
| !! | TGGGGAGGCATTAAACGTAG+TGG | + | chr5_3:40297645-40297664 | Msa0811130:CDS | 50.0% |
| !!! | AGTGGTTTTGGCCGTGAACT+AGG | + | chr5_3:40297663-40297682 | Msa0811130:CDS | 50.0% |
| TTGGCCGTGAACTAGGAGAA+TGG | + | chr5_3:40297670-40297689 | Msa0811130:CDS | 50.0% | |
| CTATGAACGGATCATGGCAC+TGG | + | chr5_3:40297924-40297943 | Msa0811130:intron | 50.0% | |
| TCTCTGATGAACCATGGGGA+TGG | + | chr5_3:40298241-40298260 | Msa0811130:CDS | 50.0% | |
| CATGGCGCTTGAGTGAAGCA+TGG | - | chr5_3:40297627-40297646 | None:intergenic | 55.0% | |
| CATGCTTCACTCAAGCGCCA+TGG | + | chr5_3:40297625-40297644 | Msa0811130:CDS | 55.0% | |
| TGCTTCACTCAAGCGCCATG+GGG | + | chr5_3:40297627-40297646 | Msa0811130:CDS | 55.0% | |
| ! | GCACTGGTGCATTCCTTGCA+TGG | + | chr5_3:40297940-40297959 | Msa0811130:intron | 55.0% |
| CATGGCGCTTGAGTGAAGCA+TGG | - | chr5_3:40297627-40297646 | None:intergenic | 55.0% | |
| CATGCTTCACTCAAGCGCCA+TGG | + | chr5_3:40297625-40297644 | Msa0811130:CDS | 55.0% | |
| TGCTTCACTCAAGCGCCATG+GGG | + | chr5_3:40297627-40297646 | Msa0811130:CDS | 55.0% | |
| ! | GCACTGGTGCATTCCTTGCA+TGG | + | chr5_3:40297940-40297959 | Msa0811130:intron | 55.0% |
| TTCACTCAAGCGCCATGGGG+AGG | + | chr5_3:40297630-40297649 | Msa0811130:CDS | 60.0% | |
| !! | GGAGGTTGGTACCATCCCCA+TGG | - | chr5_3:40298255-40298274 | None:intergenic | 60.0% |
| TTCACTCAAGCGCCATGGGG+AGG | + | chr5_3:40297630-40297649 | Msa0811130:CDS | 60.0% | |
| !! | GGAGGTTGGTACCATCCCCA+TGG | - | chr5_3:40298255-40298274 | None:intergenic | 60.0% |
| ! | GACTGGTGGGTCTCGACCAG+AGG | + | chr5_3:40297075-40297094 | Msa0811130:CDS | 65.0% |
| ! | GACTGGTGGGTCTCGACCAG+AGG | + | chr5_3:40297075-40297094 | Msa0811130:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 40297010 | 40298296 | 40297010 | ID=Msa0811130;Name=Msa0811130 |
| chr5_3 | mRNA | 40297010 | 40298296 | 40297010 | ID=Msa0811130-mRNA-1;Parent=Msa0811130;Name=Msa0811130-mRNA-1;_AED=0.12;_eAED=0.12;_QI=0|0.6|0.66|0.83|1|1|6|9|176 |
| chr5_3 | exon | 40297010 | 40297096 | 40297010 | ID=Msa0811130-mRNA-1:exon:12341;Parent=Msa0811130-mRNA-1 |
| chr5_3 | exon | 40297187 | 40297338 | 40297187 | ID=Msa0811130-mRNA-1:exon:12342;Parent=Msa0811130-mRNA-1 |
| chr5_3 | exon | 40297439 | 40297499 | 40297439 | ID=Msa0811130-mRNA-1:exon:12343;Parent=Msa0811130-mRNA-1 |
| chr5_3 | exon | 40297585 | 40297691 | 40297585 | ID=Msa0811130-mRNA-1:exon:12344;Parent=Msa0811130-mRNA-1 |
| chr5_3 | exon | 40297853 | 40297890 | 40297853 | ID=Msa0811130-mRNA-1:exon:12345;Parent=Msa0811130-mRNA-1 |
| chr5_3 | exon | 40298202 | 40298296 | 40298202 | ID=Msa0811130-mRNA-1:exon:12346;Parent=Msa0811130-mRNA-1 |
| chr5_3 | CDS | 40297010 | 40297096 | 40297010 | ID=Msa0811130-mRNA-1:cds;Parent=Msa0811130-mRNA-1 |
| chr5_3 | CDS | 40297187 | 40297338 | 40297187 | ID=Msa0811130-mRNA-1:cds;Parent=Msa0811130-mRNA-1 |
| chr5_3 | CDS | 40297439 | 40297499 | 40297439 | ID=Msa0811130-mRNA-1:cds;Parent=Msa0811130-mRNA-1 |
| chr5_3 | CDS | 40297585 | 40297691 | 40297585 | ID=Msa0811130-mRNA-1:cds;Parent=Msa0811130-mRNA-1 |
| chr5_3 | CDS | 40297853 | 40297890 | 40297853 | ID=Msa0811130-mRNA-1:cds;Parent=Msa0811130-mRNA-1 |
| chr5_3 | CDS | 40298202 | 40298287 | 40298202 | ID=Msa0811130-mRNA-1:cds;Parent=Msa0811130-mRNA-1 |
| chr5_3 | three_prime_UTR | 40298288 | 40298296 | 40298288 | ID=Msa0811130-mRNA-1:three_prime_utr;Parent=Msa0811130-mRNA-1 |
| Gene Sequence |
| Protein sequence |
