AlfalfaGEDB | Msa0997940

M. sativa cultivar zhongmu-4 / Msa0997940

KEGG: -
GO: -
PFAM: PF00564.27

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0997940	XP_003620399.1	95.931	639	22	2	1	635	1	639	0.0	1227

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0997940	G7KMK4	95.931	639	22	2	1	635	1	639	0.0	1227

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0037220	Msa0997940	0.800758	1.239968e-48	-8.615850e-47
Msa0085030	Msa0997940	0.812213	4.746206e-51	-8.615850e-47
Msa0679780	Msa0997940	-0.813633	2.318828e-51	-8.615850e-47
Msa0715510	Msa0997940	0.823700	1.202728e-53	-8.615850e-47
Msa0758150	Msa0997940	0.800922	1.148166e-48	-8.615850e-47
Msa0817100	Msa0997940	0.808741	2.668009e-50	-8.615850e-47
Msa0997940	Msa1363690	0.805931	1.051682e-49	-8.615850e-47
Msa0997940	Msa1378950	0.803902	2.792236e-49	-8.615850e-47
Msa0997940	Msa1389350	0.810632	1.046443e-50	-8.615850e-47
Msa0997940	Msa1396550	0.813756	2.178588e-51	-8.615850e-47
Msa0548760	Msa0997940	0.810838	9.447644e-51	-8.615850e-47
Msa0898060	Msa0997940	0.871894	4.824414e-67	-8.615850e-47
Msa0924490	Msa0997940	0.902868	6.238595e-79	-8.615850e-47
Msa0963290	Msa0997940	0.881405	2.466236e-70	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0997940	MtrunA17_Chr6g0483611	95.931	639	22	2	1	635	1	639	0.0	1227
Msa0997940	MtrunA17_Chr8g0392371	48.513	639	234	30	22	635	20	588	3.72e-135	408
Msa0997940	MtrunA17_Chr1g0209151	43.781	402	154	18	3	359	14	388	1.57e-72	248
Msa0997940	MtrunA17_Chr1g0209151	36.818	220	95	13	439	635	553	751	8.28e-15	78.2
Msa0997940	MtrunA17_Chr4g0048541	43.411	258	110	13	58	298	28	266	1.95e-40	153
Msa0997940	MtrunA17_Chr2g0305141	45.122	164	74	6	40	200	155	305	1.46e-29	125
Msa0997940	MtrunA17_Chr2g0279951	41.772	158	69	4	16	165	3	145	1.62e-29	122
Msa0997940	MtrunA17_Chr4g0065211	39.869	153	77	6	56	201	149	293	7.01e-26	114
Msa0997940	MtrunA17_Chr4g0049441	46.429	112	53	3	58	167	38	144	8.32e-26	110
Msa0997940	MtrunA17_Chr6g0461841	47.458	118	50	4	48	164	183	289	2.28e-24	108
Msa0997940	MtrunA17_Chr2g0310761	40.690	145	76	4	58	200	168	304	9.33e-24	107
Msa0997940	MtrunA17_Chr2g0310781	34.722	216	117	7	59	272	151	344	1.99e-23	105
Msa0997940	MtrunA17_Chr2g0277031	41.739	115	59	2	55	169	9	115	2.64e-22	98.6
Msa0997940	MtrunA17_Chr1g0196631	46.729	107	50	3	58	164	193	292	2.87e-22	102
Msa0997940	MtrunA17_Chr5g0428011	46.789	109	52	3	58	165	26	129	4.59e-22	98.6
Msa0997940	MtrunA17_Chr8g0357611	37.255	153	87	4	59	210	179	323	4.26e-20	95.5
Msa0997940	MtrunA17_Chr4g0072741	42.254	142	71	5	53	193	46	177	1.78e-19	93.2
Msa0997940	MtrunA17_Chr5g0412711	46.000	100	53	1	55	154	12	110	2.46e-19	87.4
Msa0997940	MtrunA17_Chr5g0428071	34.118	170	94	5	36	193	17	180	9.09e-19	89.4
Msa0997940	MtrunA17_Chr3g0117061	38.843	121	66	3	55	175	5	117	1.27e-18	84.7
Msa0997940	MtrunA17_Chr5g0440771	42.857	112	54	4	58	165	3	108	1.57e-17	81.3
Msa0997940	MtrunA17_Chr4g0058551	45.263	95	50	1	55	149	5	97	8.84e-16	75.9

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0997940	AT2G01190.1	37.950	722	310	27	18	635	33	720	9.40e-101	323
Msa0997940	AT3G18230.1	42.033	659	254	25	54	635	59	666	2.80e-97	312
Msa0997940	AT4G05150.1	43.333	150	61	5	58	193	58	197	8.31e-32	129
Msa0997940	AT1G25300.1	52.778	108	42	2	58	165	10	108	1.51e-28	115
Msa0997940	AT5G09620.2	50.435	115	50	2	58	169	39	149	2.88e-28	119
Msa0997940	AT5G09620.1	50.435	115	50	2	58	169	39	149	3.50e-28	119
Msa0997940	AT5G64430.1	44.521	146	69	3	58	199	44	181	6.30e-27	115
Msa0997940	AT5G57610.1	44.203	138	69	4	58	194	23	153	3.89e-26	114
Msa0997940	AT5G16220.1	37.288	177	73	3	57	198	29	202	3.56e-25	109
Msa0997940	AT1G79570.3	36.196	163	91	3	58	214	176	331	3.03e-24	108
Msa0997940	AT1G79570.4	36.196	163	91	3	58	214	176	331	7.27e-24	107
Msa0997940	AT1G79570.5	36.196	163	91	3	58	214	176	331	7.27e-24	107
Msa0997940	AT1G16270.1	35.976	164	92	3	57	214	163	319	8.55e-24	107
Msa0997940	AT1G16270.2	35.976	164	92	3	57	214	163	319	8.55e-24	107
Msa0997940	AT1G16270.3	35.976	164	92	3	57	214	163	319	8.55e-24	107
Msa0997940	AT1G79570.2	36.196	163	91	3	58	214	176	331	9.03e-24	107
Msa0997940	AT1G79570.1	36.196	163	91	3	58	214	176	331	9.03e-24	107
Msa0997940	AT5G49920.1	39.597	149	77	3	58	206	9	144	2.03e-23	101
Msa0997940	AT3G46920.1	38.125	160	89	4	58	214	8	160	2.11e-23	106
Msa0997940	AT3G46920.2	38.125	160	89	4	58	214	74	226	2.32e-23	106
Msa0997940	AT1G04700.1	44.882	127	59	3	38	164	105	220	9.14e-23	104
Msa0997940	AT1G04700.2	44.882	127	59	3	38	164	105	220	9.14e-23	104
Msa0997940	AT1G04700.3	44.882	127	59	3	38	164	105	220	9.22e-23	103
Msa0997940	AT3G26510.1	46.789	109	49	3	59	164	10	112	1.46e-21	93.6
Msa0997940	AT3G26510.4	46.789	109	49	3	59	164	10	112	1.46e-21	93.6
Msa0997940	AT3G26510.3	46.789	109	49	3	59	164	10	112	1.46e-21	93.6
Msa0997940	AT3G26510.2	46.789	109	49	3	59	164	10	112	1.46e-21	93.6
Msa0997940	AT3G26510.6	46.789	109	49	3	59	164	10	112	1.46e-21	93.6
Msa0997940	AT3G26510.5	46.789	109	49	3	59	164	10	112	1.46e-21	93.6
Msa0997940	AT2G35050.1	41.667	108	55	2	58	165	176	275	7.07e-21	98.2
Msa0997940	AT2G35050.2	41.667	108	55	2	58	165	176	275	7.07e-21	98.2
Msa0997940	AT3G48240.1	50.000	88	42	1	59	146	14	99	1.01e-19	87.8
Msa0997940	AT3G24715.1	42.593	108	55	2	58	165	175	275	8.95e-19	91.7
Msa0997940	AT3G24715.3	42.593	108	55	2	58	165	175	275	8.95e-19	91.7
Msa0997940	AT3G24715.2	42.593	108	55	2	58	165	175	275	8.95e-19	91.7
Msa0997940	AT1G70640.1	47.253	91	47	1	59	149	8	97	5.67e-18	82.4
Msa0997940	AT5G63130.1	47.872	94	47	1	56	149	12	103	9.54e-15	73.6
Msa0997940	AT5G63130.2	47.872	94	47	1	56	149	12	103	9.54e-15	73.6

Find 164 sgRNAs with CRISPR-Local

Find 187 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CTATTAGAAGCTACCAAATT+AGG	0.139626	6_4:-78100617	None:intergenic
TTAGGGTTAGGTGCTTTATT+AGG	0.180820	6_4:-78100677	None:intergenic
CGCGTGATCGTGGTGGCGGC+TGG	0.231501	6_4:-78098481	None:intergenic
AGATTCTTTATTTGCATATA+AGG	0.236383	6_4:+78098094	Msa0997940:five_prime_UTR
ACTATATTCATAACCATAAT+TGG	0.249686	6_4:-78100822	None:intergenic
GTTGAATTTGATGCCACATT+AGG	0.259994	6_4:-78100695	None:intergenic
TAATATAAATGACCCTAATT+TGG	0.265430	6_4:+78100604	Msa0997940:CDS
CCAGTTTATGTAATGCCTAT+TGG	0.270718	6_4:+78100545	Msa0997940:CDS
GCGATCTACGACCACGATTC+TGG	0.272298	6_4:-78098633	None:intergenic
CCTCCTAGTGGTACCAATTA+TGG	0.272812	6_4:+78100809	Msa0997940:CDS
ACACTTGAATCTCAACTTAT+AGG	0.282398	6_4:+78098185	Msa0997940:five_prime_UTR
GAGAAACAGAGTTAGTTAAA+AGG	0.288036	6_4:-78098258	None:intergenic
CCATTAGAGATTGTGAGTTT+TGG	0.288599	6_4:-78098361	None:intergenic
TGTTGCAATGTCATGTTATA+TGG	0.302488	6_4:-78100581	None:intergenic
CTAATTTGGTAGCTTCTAAT+AGG	0.303343	6_4:+78100618	Msa0997940:CDS
CTAGGAGGAGCTACATTAAT+AGG	0.313944	6_4:-78100794	None:intergenic
GGTGCTTTATTAGGGTAAAT+TGG	0.314952	6_4:-78100668	None:intergenic
AGCTTGCCTCCGGGGACATT+AGG	0.320024	6_4:-78098533	None:intergenic
CCAATAGGCATTACATAAAC+TGG	0.320202	6_4:-78100545	None:intergenic
TTCTTCTTTGTCTCCTTCAA+TGG	0.330707	6_4:+78099180	Msa0997940:CDS
CCAAAACTCACAATCTCTAA+TGG	0.331415	6_4:+78098361	Msa0997940:exon
TTGAATTTGATGCCACATTA+GGG	0.333465	6_4:-78100694	None:intergenic
CGTGGTGGCGGCTGGGGTGG+TGG	0.334133	6_4:-78098473	None:intergenic
TCATCGACACGAACACGAAT+TGG	0.342900	6_4:-78099214	None:intergenic
TAGGGTTAGGTGCTTTATTA+GGG	0.347173	6_4:-78100676	None:intergenic
GATGATGAGAGATCAGATTA+TGG	0.354406	6_4:+78099412	Msa0997940:CDS
TTCTTGATGATAAATAATCT+TGG	0.357557	6_4:-78100288	None:intergenic
CCATACCTTGTAACTGAATC+TGG	0.358887	6_4:-78099517	None:intergenic
CCCATTGAAAGTGTGGTATC+TGG	0.360704	6_4:-78098884	None:intergenic
ACAACAAAATAATGCTCCTT+TGG	0.364011	6_4:+78100877	Msa0997940:CDS
AGGCCAATAATACCACAAAA+TGG	0.366926	6_4:+78100638	Msa0997940:CDS
GTTGTTGTGGTGGTGGTTGT+TGG	0.367405	6_4:-78100394	None:intergenic
TCTGATCACTCTACTTAGTT+TGG	0.370056	6_4:-78098299	None:intergenic
ACTTGGTAGTAAGATGAAAT+TGG	0.371848	6_4:-78100476	None:intergenic
GCTTGAAAACAACAACAATA+AGG	0.375409	6_4:+78099081	Msa0997940:CDS
ACCAGATACCACACTTTCAA+TGG	0.385542	6_4:+78098883	Msa0997940:CDS
GCTTGCCTCCGGGGACATTA+GGG	0.396519	6_4:-78098532	None:intergenic
CATTATCTCCAGAAAATTGT+TGG	0.402545	6_4:-78100958	None:intergenic
GGTTGTTGGAGTTGTTGATT+TGG	0.402867	6_4:-78100380	None:intergenic
GCGTGATCGTGGTGGCGGCT+GGG	0.402871	6_4:-78098480	None:intergenic
CGTGATCGTGGTGGCGGCTG+GGG	0.405669	6_4:-78098479	None:intergenic
AGGAATAGCAGAGTGAAAAC+AGG	0.407587	6_4:-78098238	None:intergenic
GTTTGGTGCAGAGTGAAAAC+AGG	0.409676	6_4:-78098282	None:intergenic
TATTAGAAGCTACCAAATTA+GGG	0.414352	6_4:-78100616	None:intergenic
TGTTGTTGAAATTGATTTGA+AGG	0.417721	6_4:-78100731	None:intergenic
CTGGGGTGGTGGCGATGATA+AGG	0.417894	6_4:-78098462	None:intergenic
AGCTGATACTTGAGAGTAAA+GGG	0.418529	6_4:-78098713	None:intergenic
TCAGATTATGGAGGACTGAT+TGG	0.422060	6_4:+78099424	Msa0997940:CDS
TTTGATGCCACATTAGGGTT+AGG	0.422347	6_4:-78100689	None:intergenic
TTCTTCTGCTAATGTGGCTA+TGG	0.422627	6_4:+78099303	Msa0997940:CDS
TCACATAGAAAGAGAAATAG+AGG	0.427157	6_4:+78098154	Msa0997940:five_prime_UTR
CATGAGACGAAGCTTGCCTC+CGG	0.429165	6_4:-78098543	None:intergenic
TGTTCTCTATATTTGTACCT+TGG	0.440592	6_4:-78100316	None:intergenic
AATGCTGCAGCAGCAGCTGC+AGG	0.444841	6_4:-78100923	None:intergenic
GTGGTGATGTGAATGTGAAT+AGG	0.446979	6_4:+78099380	Msa0997940:CDS
TGTTGATTTGGATCTGATTG+TGG	0.447760	6_4:-78100368	None:intergenic
AGGAACGGTGGTCGCGGCAG+TGG	0.448635	6_4:-78098399	None:intergenic
CATTGAGAATTGTTCTTGAA+AGG	0.448885	6_4:-78098685	None:intergenic
TGGTGATGTGAATGTGAATA+GGG	0.453479	6_4:+78099381	Msa0997940:CDS
GTCAAATAGAACTTCACAAC+CGG	0.455061	6_4:+78100988	Msa0997940:CDS
AATTGTTGTTGTTGTGGTGG+TGG	0.458277	6_4:-78100401	None:intergenic
GATCGTGGTGGCGGCTGGGG+TGG	0.461863	6_4:-78098476	None:intergenic
TGGTGGATATAGTGAGTGTT+GGG	0.468015	6_4:-78100431	None:intergenic
TGAAATTGGAACTTGATTTG+TGG	0.468435	6_4:-78100462	None:intergenic
CTTCACCAGATTCAGTTACA+AGG	0.472765	6_4:+78099512	Msa0997940:CDS
ATTATCTCCAGAAAATTGTT+GGG	0.478016	6_4:-78100957	None:intergenic
TGGAATACCAAGACAAAAGC+TGG	0.484607	6_4:+78098027	None:intergenic
GGTGGCAAATTCTCCATTGA+AGG	0.487486	6_4:-78099193	None:intergenic
TGTTGTTTCTTCTGCTAATG+TGG	0.488333	6_4:+78099297	Msa0997940:CDS
GGTTGTTGTGTAGATCCAAT+AGG	0.494757	6_4:-78100560	None:intergenic
CAGGGGAGAAACAGAGTAAG+TGG	0.496252	6_4:-78098219	None:intergenic
GATAAGGACTCGATCGACTC+AGG	0.496681	6_4:-78098446	None:intergenic
CATCTGATGTTACTGTAATG+AGG	0.497110	6_4:-78098757	None:intergenic
TGAACAAATTGTTGTTGTTG+TGG	0.501182	6_4:-78100407	None:intergenic
ATGAGACGAAGCTTGCCTCC+GGG	0.501595	6_4:-78098542	None:intergenic
GGAACTTGATTTGTGGATGT+AGG	0.503316	6_4:-78100455	None:intergenic
CATGAGGACGCGGCATTATG+TGG	0.505111	6_4:-78098580	None:intergenic
GAAGCCATTGTCATTGCTGC+AGG	0.505850	6_4:-78099334	None:intergenic
AATTATGGTTATGAATATAG+TGG	0.506746	6_4:+78100824	Msa0997940:CDS
GAACTTGATTTGTGGATGTA+GGG	0.509377	6_4:-78100454	None:intergenic
CCAGATACCACACTTTCAAT+GGG	0.510170	6_4:+78098884	Msa0997940:CDS
CTTGATTTGTGGATGTAGGG+TGG	0.512423	6_4:-78100451	None:intergenic
CTTCGTCTCATGTGCAGCTA+CGG	0.512697	6_4:+78098554	Msa0997940:CDS
GATAAGTCTCTATGTTATGT+AGG	0.513509	6_4:+78098602	Msa0997940:CDS
TCGATGAAAATGCTGGTAGC+AGG	0.519398	6_4:+78099230	Msa0997940:CDS
TGAAGTTGTGATTGTTGTGA+TGG	0.521247	6_4:-78100509	None:intergenic
GCAATGACAATGGCTTCAGC+TGG	0.523790	6_4:+78099340	Msa0997940:CDS
CTCACACCACCACTAGTCCT+TGG	0.525251	6_4:-78099484	None:intergenic
TTCTTGAAAGGCGCGAACAT+AGG	0.525991	6_4:-78098673	None:intergenic
TTACTGTAATGAGGTTATCA+AGG	0.526871	6_4:-78098748	None:intergenic
AGAGGTGTGTCAGATTCAGC+AGG	0.528641	6_4:+78098977	Msa0997940:CDS
GTGATTGTTGTGATGGTGGA+GGG	0.530181	6_4:-78100502	None:intergenic
GTGGTGGATATAGTGAGTGT+TGG	0.533020	6_4:-78100432	None:intergenic
CAGCTGCAGGAGTCATGGAT+TGG	0.535143	6_4:-78100910	None:intergenic
TGAACAAGCTGCAATGGTAA+AGG	0.535312	6_4:-78099460	None:intergenic
TTGGATGATGTTAGGAGGAA+CGG	0.538215	6_4:-78098414	None:intergenic
CAATTTCAACAACAATATGT+TGG	0.538930	6_4:+78100740	Msa0997940:CDS
GTGATGGTGGAGGGTATACT+TGG	0.539581	6_4:-78100493	None:intergenic
GTTAGGAGGAACGGTGGTCG+CGG	0.543552	6_4:-78098405	None:intergenic
TTATTGCTTGAATCACTAGC+AGG	0.547203	6_4:-78099028	None:intergenic
CTTTCAAGAACAATTCTCAA+TGG	0.550161	6_4:+78098686	Msa0997940:CDS
TAGTGATTCAAGCAATAACT+TGG	0.550481	6_4:+78099033	Msa0997940:CDS
GTTGATGCACTCAACAACTC+AGG	0.551095	6_4:+78098944	Msa0997940:CDS
TTAACGCGTGATCGTGGTGG+CGG	0.551559	6_4:-78098485	None:intergenic
AATCTGGATCCGATTTATAC+CGG	0.553885	6_4:-78101007	None:intergenic
TTGTAATGAAACAAGATGGT+GGG	0.554749	6_4:+78099272	Msa0997940:CDS
AAGCTGATACTTGAGAGTAA+AGG	0.557294	6_4:-78098714	None:intergenic
GTTTCATTAACGCGTGATCG+TGG	0.561214	6_4:-78098491	None:intergenic
AGCAGCAGCTGCAGGAGTCA+TGG	0.562009	6_4:-78100915	None:intergenic
TTGATGCACTCAACAACTCA+GGG	0.562066	6_4:+78098945	Msa0997940:CDS
GCTTTATTAGGGTAAATTGG+TGG	0.566463	6_4:-78100665	None:intergenic
CTTGGTTGAACAAGCTGCAA+TGG	0.570036	6_4:-78099466	None:intergenic
TGTGGTTGATGATGAAATTG+AGG	0.571680	6_4:-78100767	None:intergenic
TGTGATTGTTGTGATGGTGG+AGG	0.572903	6_4:-78100503	None:intergenic
AGTTGTGATTGTTGTGATGG+TGG	0.574789	6_4:-78100506	None:intergenic
GAATATAGTGGTAATGTGGA+AGG	0.576884	6_4:+78100836	Msa0997940:CDS
CTTGTAACTGAATCTGGTGA+AGG	0.582351	6_4:-78099511	None:intergenic
TCGACACGAACACGAATTGG+TGG	0.582554	6_4:-78099211	None:intergenic
GATTTGTGGATGTAGGGTGG+TGG	0.586043	6_4:-78100448	None:intergenic
ACAAATTGTTGTTGTTGTGG+TGG	0.586159	6_4:-78100404	None:intergenic
CGTCTCATGTGCAGCTACGG+AGG	0.586855	6_4:+78098557	Msa0997940:CDS
CTTGTTCAACCAAGGACTAG+TGG	0.587169	6_4:+78099475	Msa0997940:CDS
AAGTGATCCCATTGAAAGTG+TGG	0.597227	6_4:-78098891	None:intergenic
AACATGTAACTTGAATCTTG+AGG	0.598939	6_4:-78100341	None:intergenic
ACATAAACTGGATATTGTTG+TGG	0.599629	6_4:-78100533	None:intergenic
GATTCCTTCCCTAATGTCCC+CGG	0.603329	6_4:+78098524	Msa0997940:CDS
TGATTTGGATCTGATTGTGG+TGG	0.606936	6_4:-78100365	None:intergenic
AAAGTTGTAATGAAACAAGA+TGG	0.607350	6_4:+78099268	Msa0997940:CDS
TAAAGCACCTAACCCTAATG+TGG	0.611248	6_4:+78100682	Msa0997940:CDS
GGAATAGCAGAGTGAAAACA+GGG	0.611692	6_4:-78098237	None:intergenic
GCTACATTAATAGGAACTTG+TGG	0.617987	6_4:-78100785	None:intergenic
GCGGCAGTGGAGATAAGCGG+TGG	0.619198	6_4:-78098386	None:intergenic
CATTGCAGCTTGTTCAACCA+AGG	0.622441	6_4:+78099467	Msa0997940:CDS
AACTCAGGGATTCTCTCAAG+AGG	0.622550	6_4:+78098959	Msa0997940:CDS
AATTCCTGCAGCAATGACAA+TGG	0.625152	6_4:+78099330	Msa0997940:CDS
GTTGTAATGAAACAAGATGG+TGG	0.626801	6_4:+78099271	Msa0997940:CDS
GCCTCCGGGGACATTAGGGA+AGG	0.627736	6_4:-78098528	None:intergenic
CGGAGCGGAACAGAACAGAA+TGG	0.629575	6_4:-78098326	None:intergenic
GTTCGTGTCGATGAAAATGC+TGG	0.632505	6_4:+78099223	Msa0997940:CDS
TCATTAACGCGTGATCGTGG+TGG	0.637623	6_4:-78098488	None:intergenic
TTATGAATATAGTGGTAATG+TGG	0.637729	6_4:+78100832	Msa0997940:CDS
TGGAATAAAATGAAACGGAG+CGG	0.638446	6_4:-78098341	None:intergenic
TTTGGTGCAGAGTGAAAACA+GGG	0.643559	6_4:-78098281	None:intergenic
CCATAATTGGTACCACTAGG+AGG	0.645975	6_4:-78100809	None:intergenic
TATCATCAAGAACAAGTCCA+AGG	0.646741	6_4:+78100299	Msa0997940:CDS
GTCGCGGCAGTGGAGATAAG+CGG	0.656138	6_4:-78098389	None:intergenic
TGAGACGAAGCTTGCCTCCG+GGG	0.658630	6_4:-78098541	None:intergenic
ACAAGCTGCAATGGTAAAGG+CGG	0.660310	6_4:-78099457	None:intergenic
TAACATAGAGACTTATCATG+AGG	0.662427	6_4:-78098596	None:intergenic
ATGATGCAAAATCTGAGACA+TGG	0.663147	6_4:+78098918	Msa0997940:CDS
GATGAGAGATCAGATTATGG+AGG	0.672016	6_4:+78099415	Msa0997940:CDS
GATTGGTACTGAGTAACCAA+AGG	0.673524	6_4:-78100893	None:intergenic
ATTAATGTAGCTCCTCCTAG+TGG	0.674238	6_4:+78100797	Msa0997940:CDS
AAGTCTCTATGTTATGTAGG+CGG	0.674337	6_4:+78098605	Msa0997940:CDS
TAACCATAATTGGTACCACT+AGG	0.675449	6_4:-78100812	None:intergenic
AGGTTATCAAGGTCTTCATG+AGG	0.680812	6_4:-78098737	None:intergenic
GTTCAACCAAGGACTAGTGG+TGG	0.681531	6_4:+78099478	Msa0997940:CDS
AGGCGGTGACACCAGAATCG+TGG	0.682815	6_4:+78098622	Msa0997940:CDS
TCCTTCCCTAATGTCCCCGG+AGG	0.690372	6_4:+78098527	Msa0997940:CDS
AGAGACTTATCATGAGGACG+CGG	0.691797	6_4:-78098590	None:intergenic
GGAGTTGTTACTGCTACTAG+TGG	0.696005	6_4:+78099361	Msa0997940:CDS
GATGATGTTAGGAGGAACGG+TGG	0.719830	6_4:-78098411	None:intergenic
GAATAGCAGAGTGAAAACAG+GGG	0.755698	6_4:-78098236	None:intergenic
TTGGTGCAGAGTGAAAACAG+GGG	0.854008	6_4:-78098280	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	CTATAAAAAAAAGTATAAAA+TGG	-	chr6_4:78099937-78099956	None:intergenic	10.0%
!!!	ATACTTTTTTTTATAGTAGA+TGG	+	chr6_4:78099941-78099960	Msa0997940:intron	15.0%
!!!	AGATTCTTTATTTGCATATA+AGG	+	chr6_4:78098094-78098113	Msa0997940:five_prime_UTR	20.0%
!!!	AGTTTTGGAATAAAATGAAA+CGG	-	chr6_4:78098349-78098368	None:intergenic	20.0%
!!!	TTCTTGATGATAAATAATCT+TGG	-	chr6_4:78100291-78100310	None:intergenic	20.0%
!!	TAATATAAATGACCCTAATT+TGG	+	chr6_4:78100604-78100623	Msa0997940:CDS	20.0%
!!	ACTATATTCATAACCATAAT+TGG	-	chr6_4:78100825-78100844	None:intergenic	20.0%
!!	AATTATGGTTATGAATATAG+TGG	+	chr6_4:78100824-78100843	Msa0997940:CDS	20.0%
!!!	TATGTGACTTTACTTTTGAA+AGG	-	chr6_4:78098141-78098160	None:intergenic	25.0%
!	AAAGTTGTAATGAAACAAGA+TGG	+	chr6_4:78099268-78099287	Msa0997940:CDS	25.0%
!	AGAAAAGAAATTATGTTCTG+TGG	+	chr6_4:78099660-78099679	Msa0997940:intron	25.0%
!	GAAAAGAAATTATGTTCTGT+GGG	+	chr6_4:78099661-78099680	Msa0997940:intron	25.0%
!	AACTAATCTAACACGTATAT+TGG	-	chr6_4:78099771-78099790	None:intergenic	25.0%
!	TACTAACATAGATGTATTTG+TGG	-	chr6_4:78099854-78099873	None:intergenic	25.0%
!	TATTAGAAGCTACCAAATTA+GGG	-	chr6_4:78100619-78100638	None:intergenic	25.0%
!!!	TGTTGTTGAAATTGATTTGA+AGG	-	chr6_4:78100734-78100753	None:intergenic	25.0%
!	CAATTTCAACAACAATATGT+TGG	+	chr6_4:78100740-78100759	Msa0997940:CDS	25.0%
!!	TTATGAATATAGTGGTAATG+TGG	+	chr6_4:78100832-78100851	Msa0997940:CDS	25.0%
!	ATTATCTCCAGAAAATTGTT+GGG	-	chr6_4:78100960-78100979	None:intergenic	25.0%
!!	GACTTTACTTTTGAAAGGAA+AGG	-	chr6_4:78098136-78098155	None:intergenic	30.0%
	TCACATAGAAAGAGAAATAG+AGG	+	chr6_4:78098154-78098173	Msa0997940:five_prime_UTR	30.0%
	ACACTTGAATCTCAACTTAT+AGG	+	chr6_4:78098185-78098204	Msa0997940:five_prime_UTR	30.0%
	GAGAAACAGAGTTAGTTAAA+AGG	-	chr6_4:78098261-78098280	None:intergenic	30.0%
!!!	TAGTTTTGTTGGATGATGTT+AGG	-	chr6_4:78098425-78098444	None:intergenic	30.0%
	TAACATAGAGACTTATCATG+AGG	-	chr6_4:78098599-78098618	None:intergenic	30.0%
	GATAAGTCTCTATGTTATGT+AGG	+	chr6_4:78098602-78098621	Msa0997940:CDS	30.0%
	CATTGAGAATTGTTCTTGAA+AGG	-	chr6_4:78098688-78098707	None:intergenic	30.0%
	CTTTCAAGAACAATTCTCAA+TGG	+	chr6_4:78098686-78098705	Msa0997940:CDS	30.0%
	TTACTGTAATGAGGTTATCA+AGG	-	chr6_4:78098751-78098770	None:intergenic	30.0%
	TAGTGATTCAAGCAATAACT+TGG	+	chr6_4:78099033-78099052	Msa0997940:CDS	30.0%
	GCTTGAAAACAACAACAATA+AGG	+	chr6_4:78099081-78099100	Msa0997940:CDS	30.0%
!!	TTTTCTAGCATAGGTGAATT+AGG	-	chr6_4:78099148-78099167	None:intergenic	30.0%
!!	GATAAACTGTTTTCTAGCAT+AGG	-	chr6_4:78099157-78099176	None:intergenic	30.0%
	TTGTAATGAAACAAGATGGT+GGG	+	chr6_4:78099272-78099291	Msa0997940:CDS	30.0%
	AAAGAAGCAAGAAACAACTA+TGG	-	chr6_4:78099589-78099608	None:intergenic	30.0%
	TATAGTAGATGGATGAATGA+AGG	+	chr6_4:78099952-78099971	Msa0997940:intron	30.0%
	TGTTCTCTATATTTGTACCT+TGG	-	chr6_4:78100319-78100338	None:intergenic	30.0%
	AACATGTAACTTGAATCTTG+AGG	-	chr6_4:78100344-78100363	None:intergenic	30.0%
!	TGAACAAATTGTTGTTGTTG+TGG	-	chr6_4:78100410-78100429	None:intergenic	30.0%
!	TGAAATTGGAACTTGATTTG+TGG	-	chr6_4:78100465-78100484	None:intergenic	30.0%
!	ACTTGGTAGTAAGATGAAAT+TGG	-	chr6_4:78100479-78100498	None:intergenic	30.0%
	ACATAAACTGGATATTGTTG+TGG	-	chr6_4:78100536-78100555	None:intergenic	30.0%
	TGTTGCAATGTCATGTTATA+TGG	-	chr6_4:78100584-78100603	None:intergenic	30.0%
	CTATTAGAAGCTACCAAATT+AGG	-	chr6_4:78100620-78100639	None:intergenic	30.0%
!	CTAATTTGGTAGCTTCTAAT+AGG	+	chr6_4:78100618-78100637	Msa0997940:CDS	30.0%
!	GTTCCATTTTGTGGTATTAT+TGG	-	chr6_4:78100644-78100663	None:intergenic	30.0%
	TTGAATTTGATGCCACATTA+GGG	-	chr6_4:78100697-78100716	None:intergenic	30.0%
	ACAACAAAATAATGCTCCTT+TGG	+	chr6_4:78100877-78100896	Msa0997940:CDS	30.0%
	CATTATCTCCAGAAAATTGT+TGG	-	chr6_4:78100961-78100980	None:intergenic	30.0%
	TCTGATCACTCTACTTAGTT+TGG	-	chr6_4:78098302-78098321	None:intergenic	35.0%
	TGGAATAAAATGAAACGGAG+CGG	-	chr6_4:78098344-78098363	None:intergenic	35.0%
!	CCATTAGAGATTGTGAGTTT+TGG	-	chr6_4:78098364-78098383	None:intergenic	35.0%
	CCAAAACTCACAATCTCTAA+TGG	+	chr6_4:78098361-78098380	Msa0997940:exon	35.0%
!	TTTTGTTGGATGATGTTAGG+AGG	-	chr6_4:78098422-78098441	None:intergenic	35.0%
	AAGTCTCTATGTTATGTAGG+CGG	+	chr6_4:78098605-78098624	Msa0997940:CDS	35.0%
	AGCTGATACTTGAGAGTAAA+GGG	-	chr6_4:78098716-78098735	None:intergenic	35.0%
	AAGCTGATACTTGAGAGTAA+AGG	-	chr6_4:78098717-78098736	None:intergenic	35.0%
	CATCTGATGTTACTGTAATG+AGG	-	chr6_4:78098760-78098779	None:intergenic	35.0%
!	ATGATGCAAAATCTGAGACA+TGG	+	chr6_4:78098918-78098937	Msa0997940:CDS	35.0%
	TTATTGCTTGAATCACTAGC+AGG	-	chr6_4:78099031-78099050	None:intergenic	35.0%
	TTCTTCTTTGTCTCCTTCAA+TGG	+	chr6_4:78099180-78099199	Msa0997940:CDS	35.0%
	GTTGTAATGAAACAAGATGG+TGG	+	chr6_4:78099271-78099290	Msa0997940:CDS	35.0%
!!	TGTTGTTTCTTCTGCTAATG+TGG	+	chr6_4:78099297-78099316	Msa0997940:CDS	35.0%
!	TGGTGATGTGAATGTGAATA+GGG	+	chr6_4:78099381-78099400	Msa0997940:CDS	35.0%
	GATGATGAGAGATCAGATTA+TGG	+	chr6_4:78099412-78099431	Msa0997940:CDS	35.0%
!	GTGTAACATAGCTCTCTTTT+TGG	+	chr6_4:78099549-78099568	Msa0997940:intron	35.0%
	ATGTTCTGTGGGATAAAGTT+TGG	+	chr6_4:78099672-78099691	Msa0997940:intron	35.0%
	TATCATCAAGAACAAGTCCA+AGG	+	chr6_4:78100299-78100318	Msa0997940:CDS	35.0%
!!	TGTTGATTTGGATCTGATTG+TGG	-	chr6_4:78100371-78100390	None:intergenic	35.0%
!	ACAAATTGTTGTTGTTGTGG+TGG	-	chr6_4:78100407-78100426	None:intergenic	35.0%
!!	GAACTTGATTTGTGGATGTA+GGG	-	chr6_4:78100457-78100476	None:intergenic	35.0%
	TGAAGTTGTGATTGTTGTGA+TGG	-	chr6_4:78100512-78100531	None:intergenic	35.0%
	CCAATAGGCATTACATAAAC+TGG	-	chr6_4:78100548-78100567	None:intergenic	35.0%
	CCAGTTTATGTAATGCCTAT+TGG	+	chr6_4:78100545-78100564	Msa0997940:CDS	35.0%
	AGGCCAATAATACCACAAAA+TGG	+	chr6_4:78100638-78100657	Msa0997940:CDS	35.0%
!	GCTTTATTAGGGTAAATTGG+TGG	-	chr6_4:78100668-78100687	None:intergenic	35.0%
!	GGTGCTTTATTAGGGTAAAT+TGG	-	chr6_4:78100671-78100690	None:intergenic	35.0%
!	TAGGGTTAGGTGCTTTATTA+GGG	-	chr6_4:78100679-78100698	None:intergenic	35.0%
!	TTAGGGTTAGGTGCTTTATT+AGG	-	chr6_4:78100680-78100699	None:intergenic	35.0%
	GTTGAATTTGATGCCACATT+AGG	-	chr6_4:78100698-78100717	None:intergenic	35.0%
!!	TGTGGTTGATGATGAAATTG+AGG	-	chr6_4:78100770-78100789	None:intergenic	35.0%
	GCTACATTAATAGGAACTTG+TGG	-	chr6_4:78100788-78100807	None:intergenic	35.0%
	TAACCATAATTGGTACCACT+AGG	-	chr6_4:78100815-78100834	None:intergenic	35.0%
!	GAATATAGTGGTAATGTGGA+AGG	+	chr6_4:78100836-78100855	Msa0997940:CDS	35.0%
	GTCAAATAGAACTTCACAAC+CGG	+	chr6_4:78100988-78101007	Msa0997940:CDS	35.0%
!	GTACAATCCAGCTTTTGTCT+TGG	-	chr6_4:78098037-78098056	None:intergenic	40.0%
	GAATAGCAGAGTGAAAACAG+GGG	-	chr6_4:78098239-78098258	None:intergenic	40.0%
	GGAATAGCAGAGTGAAAACA+GGG	-	chr6_4:78098240-78098259	None:intergenic	40.0%
	AGGAATAGCAGAGTGAAAAC+AGG	-	chr6_4:78098241-78098260	None:intergenic	40.0%
!	TTTGGTGCAGAGTGAAAACA+GGG	-	chr6_4:78098284-78098303	None:intergenic	40.0%
	TTGGATGATGTTAGGAGGAA+CGG	-	chr6_4:78098417-78098436	None:intergenic	40.0%
!!!	TCGACTCAGGATAGTTTTGT+TGG	-	chr6_4:78098436-78098455	None:intergenic	40.0%
	AGGTTATCAAGGTCTTCATG+AGG	-	chr6_4:78098740-78098759	None:intergenic	40.0%
	ACCAGATACCACACTTTCAA+TGG	+	chr6_4:78098883-78098902	Msa0997940:CDS	40.0%
	CCAGATACCACACTTTCAAT+GGG	+	chr6_4:78098884-78098903	Msa0997940:CDS	40.0%
	AAGTGATCCCATTGAAAGTG+TGG	-	chr6_4:78098894-78098913	None:intergenic	40.0%
	TTGATGCACTCAACAACTCA+GGG	+	chr6_4:78098945-78098964	Msa0997940:CDS	40.0%
	TTCTTCTGCTAATGTGGCTA+TGG	+	chr6_4:78099303-78099322	Msa0997940:CDS	40.0%
	AATTCCTGCAGCAATGACAA+TGG	+	chr6_4:78099330-78099349	Msa0997940:CDS	40.0%
!	GTGGTGATGTGAATGTGAAT+AGG	+	chr6_4:78099380-78099399	Msa0997940:CDS	40.0%
	GATGAGAGATCAGATTATGG+AGG	+	chr6_4:78099415-78099434	Msa0997940:CDS	40.0%
	TCAGATTATGGAGGACTGAT+TGG	+	chr6_4:78099424-78099443	Msa0997940:CDS	40.0%
	TGAACAAGCTGCAATGGTAA+AGG	-	chr6_4:78099463-78099482	None:intergenic	40.0%
	CTTGTAACTGAATCTGGTGA+AGG	-	chr6_4:78099514-78099533	None:intergenic	40.0%
	CTTCACCAGATTCAGTTACA+AGG	+	chr6_4:78099512-78099531	Msa0997940:CDS	40.0%
	CCATACCTTGTAACTGAATC+TGG	-	chr6_4:78099520-78099539	None:intergenic	40.0%
	CCAGATTCAGTTACAAGGTA+TGG	+	chr6_4:78099517-78099536	Msa0997940:intron	40.0%
!	TGATTTGGATCTGATTGTGG+TGG	-	chr6_4:78100368-78100387	None:intergenic	40.0%
!	GGTTGTTGGAGTTGTTGATT+TGG	-	chr6_4:78100383-78100402	None:intergenic	40.0%
!	AATTGTTGTTGTTGTGGTGG+TGG	-	chr6_4:78100404-78100423	None:intergenic	40.0%
!	TGGTGGATATAGTGAGTGTT+GGG	-	chr6_4:78100434-78100453	None:intergenic	40.0%
!!	GGAACTTGATTTGTGGATGT+AGG	-	chr6_4:78100458-78100477	None:intergenic	40.0%
	AGTTGTGATTGTTGTGATGG+TGG	-	chr6_4:78100509-78100528	None:intergenic	40.0%
	GGTTGTTGTGTAGATCCAAT+AGG	-	chr6_4:78100563-78100582	None:intergenic	40.0%
!	ATTGGTGGAGTTCCATTTTG+TGG	-	chr6_4:78100653-78100672	None:intergenic	40.0%
!	TAAAGCACCTAACCCTAATG+TGG	+	chr6_4:78100682-78100701	Msa0997940:CDS	40.0%
	TTTGATGCCACATTAGGGTT+AGG	-	chr6_4:78100692-78100711	None:intergenic	40.0%
	CTAGGAGGAGCTACATTAAT+AGG	-	chr6_4:78100797-78100816	None:intergenic	40.0%
	ATTAATGTAGCTCCTCCTAG+TGG	+	chr6_4:78100797-78100816	Msa0997940:CDS	40.0%
!	GATTGGTACTGAGTAACCAA+AGG	-	chr6_4:78100896-78100915	None:intergenic	40.0%
!	GATGCTTCCCAACAATTTTC+TGG	+	chr6_4:78100950-78100969	Msa0997940:CDS	40.0%
	TTGGTGCAGAGTGAAAACAG+GGG	-	chr6_4:78098283-78098302	None:intergenic	45.0%
!!	GTTTGGTGCAGAGTGAAAAC+AGG	-	chr6_4:78098285-78098304	None:intergenic	45.0%
	GTTTCATTAACGCGTGATCG+TGG	-	chr6_4:78098494-78098513	None:intergenic	45.0%
	AGAGACTTATCATGAGGACG+CGG	-	chr6_4:78098593-78098612	None:intergenic	45.0%
!	TTCTTGAAAGGCGCGAACAT+AGG	-	chr6_4:78098676-78098695	None:intergenic	45.0%
!	CCCATTGAAAGTGTGGTATC+TGG	-	chr6_4:78098887-78098906	None:intergenic	45.0%
	GTTGATGCACTCAACAACTC+AGG	+	chr6_4:78098944-78098963	Msa0997940:CDS	45.0%
	AACTCAGGGATTCTCTCAAG+AGG	+	chr6_4:78098959-78098978	Msa0997940:CDS	45.0%
	GGTGGCAAATTCTCCATTGA+AGG	-	chr6_4:78099196-78099215	None:intergenic	45.0%
	TCATCGACACGAACACGAAT+TGG	-	chr6_4:78099217-78099236	None:intergenic	45.0%
!	GTTCGTGTCGATGAAAATGC+TGG	+	chr6_4:78099223-78099242	Msa0997940:CDS	45.0%
	TCGATGAAAATGCTGGTAGC+AGG	+	chr6_4:78099230-78099249	Msa0997940:CDS	45.0%
	GGAGTTGTTACTGCTACTAG+TGG	+	chr6_4:78099361-78099380	Msa0997940:CDS	45.0%
	ACAAGCTGCAATGGTAAAGG+CGG	-	chr6_4:78099460-78099479	None:intergenic	45.0%
	CTTGGTTGAACAAGCTGCAA+TGG	-	chr6_4:78099469-78099488	None:intergenic	45.0%
!	CATTGCAGCTTGTTCAACCA+AGG	+	chr6_4:78099467-78099486	Msa0997940:CDS	45.0%
	CTTGTTCAACCAAGGACTAG+TGG	+	chr6_4:78099475-78099494	Msa0997940:CDS	45.0%
	GACAGAGACGTAACATGACA+CGG	-	chr6_4:78100169-78100188	None:intergenic	45.0%
	GTGTCATGTTACGTCTCTGT+CGG	+	chr6_4:78100168-78100187	Msa0997940:intron	45.0%
!!	GTGGTGGATATAGTGAGTGT+TGG	-	chr6_4:78100435-78100454	None:intergenic	45.0%
!!	CTTGATTTGTGGATGTAGGG+TGG	-	chr6_4:78100454-78100473	None:intergenic	45.0%
!!	GTGATTGTTGTGATGGTGGA+GGG	-	chr6_4:78100505-78100524	None:intergenic	45.0%
!!	TGTGATTGTTGTGATGGTGG+AGG	-	chr6_4:78100506-78100525	None:intergenic	45.0%
	CCATAATTGGTACCACTAGG+AGG	-	chr6_4:78100812-78100831	None:intergenic	45.0%
	CCTCCTAGTGGTACCAATTA+TGG	+	chr6_4:78100809-78100828	Msa0997940:CDS	45.0%
	CAGGGGAGAAACAGAGTAAG+TGG	-	chr6_4:78098222-78098241	None:intergenic	50.0%
	GATGATGTTAGGAGGAACGG+TGG	-	chr6_4:78098414-78098433	None:intergenic	50.0%
!	GATAAGGACTCGATCGACTC+AGG	-	chr6_4:78098449-78098468	None:intergenic	50.0%
	TCATTAACGCGTGATCGTGG+TGG	-	chr6_4:78098491-78098510	None:intergenic	50.0%
	GATTCCTTCCCTAATGTCCC+CGG	+	chr6_4:78098524-78098543	Msa0997940:CDS	50.0%
	CTTCGTCTCATGTGCAGCTA+CGG	+	chr6_4:78098554-78098573	Msa0997940:CDS	50.0%
!	AGAGGTGTGTCAGATTCAGC+AGG	+	chr6_4:78098977-78098996	Msa0997940:CDS	50.0%
	TCGACACGAACACGAATTGG+TGG	-	chr6_4:78099214-78099233	None:intergenic	50.0%
	GAAGCCATTGTCATTGCTGC+AGG	-	chr6_4:78099337-78099356	None:intergenic	50.0%
	GCAATGACAATGGCTTCAGC+TGG	+	chr6_4:78099340-78099359	Msa0997940:CDS	50.0%
!	GTTCAACCAAGGACTAGTGG+TGG	+	chr6_4:78099478-78099497	Msa0997940:CDS	50.0%
!!	GTTGTTGTGGTGGTGGTTGT+TGG	-	chr6_4:78100397-78100416	None:intergenic	50.0%
	GATTTGTGGATGTAGGGTGG+TGG	-	chr6_4:78100451-78100470	None:intergenic	50.0%
!!	GTGATGGTGGAGGGTATACT+TGG	-	chr6_4:78100496-78100515	None:intergenic	50.0%
	CGGAGCGGAACAGAACAGAA+TGG	-	chr6_4:78098329-78098348	None:intergenic	55.0%
	TTAACGCGTGATCGTGGTGG+CGG	-	chr6_4:78098488-78098507	None:intergenic	55.0%
	ATGAGACGAAGCTTGCCTCC+GGG	-	chr6_4:78098545-78098564	None:intergenic	55.0%
	CATGAGACGAAGCTTGCCTC+CGG	-	chr6_4:78098546-78098565	None:intergenic	55.0%
	CATGAGGACGCGGCATTATG+TGG	-	chr6_4:78098583-78098602	None:intergenic	55.0%
	GCGATCTACGACCACGATTC+TGG	-	chr6_4:78098636-78098655	None:intergenic	55.0%
	CTCACACCACCACTAGTCCT+TGG	-	chr6_4:78099487-78099506	None:intergenic	55.0%
	CAGCTGCAGGAGTCATGGAT+TGG	-	chr6_4:78100913-78100932	None:intergenic	55.0%
	GTCGCGGCAGTGGAGATAAG+CGG	-	chr6_4:78098392-78098411	None:intergenic	60.0%
	GTTAGGAGGAACGGTGGTCG+CGG	-	chr6_4:78098408-78098427	None:intergenic	60.0%
!	CTGGGGTGGTGGCGATGATA+AGG	-	chr6_4:78098465-78098484	None:intergenic	60.0%
	TCCTTCCCTAATGTCCCCGG+AGG	+	chr6_4:78098527-78098546	Msa0997940:CDS	60.0%
	GCTTGCCTCCGGGGACATTA+GGG	-	chr6_4:78098535-78098554	None:intergenic	60.0%
	AGCTTGCCTCCGGGGACATT+AGG	-	chr6_4:78098536-78098555	None:intergenic	60.0%
	TGAGACGAAGCTTGCCTCCG+GGG	-	chr6_4:78098544-78098563	None:intergenic	60.0%
	CGTCTCATGTGCAGCTACGG+AGG	+	chr6_4:78098557-78098576	Msa0997940:CDS	60.0%
	AGGCGGTGACACCAGAATCG+TGG	+	chr6_4:78098622-78098641	Msa0997940:CDS	60.0%
	AGCAGCAGCTGCAGGAGTCA+TGG	-	chr6_4:78100918-78100937	None:intergenic	60.0%
	AATGCTGCAGCAGCAGCTGC+AGG	-	chr6_4:78100926-78100945	None:intergenic	60.0%
	GCGGCAGTGGAGATAAGCGG+TGG	-	chr6_4:78098389-78098408	None:intergenic	65.0%
	GCCTCCGGGGACATTAGGGA+AGG	-	chr6_4:78098531-78098550	None:intergenic	65.0%
	AGGAACGGTGGTCGCGGCAG+TGG	-	chr6_4:78098402-78098421	None:intergenic	70.0%
!!	CGTGATCGTGGTGGCGGCTG+GGG	-	chr6_4:78098482-78098501	None:intergenic	70.0%
!!	GCGTGATCGTGGTGGCGGCT+GGG	-	chr6_4:78098483-78098502	None:intergenic	70.0%
!!	GATCGTGGTGGCGGCTGGGG+TGG	-	chr6_4:78098479-78098498	None:intergenic	75.0%
!!	CGCGTGATCGTGGTGGCGGC+TGG	-	chr6_4:78098484-78098503	None:intergenic	75.0%
!!!	CGTGGTGGCGGCTGGGGTGG+TGG	-	chr6_4:78098476-78098495	None:intergenic	80.0%

Chromosome	Type	Strat	End	Strand	Name
chr6_4	gene	78098034	78101015	78098034	ID=Msa0997940;Name=Msa0997940
chr6_4	mRNA	78098034	78101015	78098034	ID=Msa0997940-mRNA-1;Parent=Msa0997940;Name=Msa0997940-mRNA-1;_AED=0.01;_eAED=0.01;_QI=346\|0\|0.5\|1\|1\|1\|2\|0\|635
chr6_4	exon	78098034	78099533	78098034	ID=Msa0997940-mRNA-1:exon:14781;Parent=Msa0997940-mRNA-1
chr6_4	exon	78100262	78101015	78100262	ID=Msa0997940-mRNA-1:exon:14782;Parent=Msa0997940-mRNA-1
chr6_4	five_prime_UTR	78098034	78098379	78098034	ID=Msa0997940-mRNA-1:five_prime_utr;Parent=Msa0997940-mRNA-1
chr6_4	CDS	78098380	78099533	78098380	ID=Msa0997940-mRNA-1:cds;Parent=Msa0997940-mRNA-1
chr6_4	CDS	78100262	78101015	78100262	ID=Msa0997940-mRNA-1:cds;Parent=Msa0997940-mRNA-1

Gene Sequence

>Msa0997940

ATGGATCCACCGCTTATCTCCACTGCCGCGACCACCGTTCCTCCTAACATCATCCAACAAAACTATCCTGAGTCGATCGAGTCCTTATCATCGCCACCACCCCAGCCGCCACCACGATCACGCGTTAATGAAACAATGCACGACGATTCCTTCCCTAATGTCCCCGGAGGCAAGCTTCGTCTCATGTGCAGCTACGGAGGCCACATAATGCCGCGTCCTCATGATAAGTCTCTATGTTATGTAGGCGGTGACACCAGAATCGTGGTCGTAGATCGCAGTTCTTCTCTGAGAGACCTATGTTCGCGCCTTTCAAGAACAATTCTCAATGGAAGACCCTTTACTCTCAAGTATCAGCTTCCTCATGAAGACCTTGATAACCTCATTACAGTAACATCAGATGAAGATCTTGATAACATGATTGAAGAATATGATCGTATAGCATCTGCATCTTCTACAATGAAAGCTTCATCATCAAGACTTAGAGTGTTTTTGTTCTTCACAAAACCAGATACCACACTTTCAATGGGATCACTTCTTGATGATGCAAAATCTGAGACATGGTTTGTTGATGCACTCAACAACTCAGGGATTCTCTCAAGAGGTGTGTCAGATTCAGCAGGAGATTCTTTTGTGAATCTTGATAATGTTCCTGCTAGTGATTCAAGCAATAACTTGGAATCTCAAGTAGAATCATTGTCTCTGCTTGAAAACAACAACAATAAGGTTAAGAATGTGTTTGATAATGTTAATGCTGTGAATTCAACACCTAATTCACCTATGCTAGAAAACAGTTTATCATCTTCTTCTTTGTCTCCTTCAATGGAGAATTTGCCACCAATTCGTGTTCGTGTCGATGAAAATGCTGGTAGCAGGCTTCAACAAGAGAACAAAGTTGTAATGAAACAAGATGGTGGGTTTGTTGTTTCTTCTGCTAATGTGGCTATGGCTGCAATTCCTGCAGCAATGACAATGGCTTCAGCTGGAGTTGTTACTGCTACTAGTGGTGATGTGAATGTGAATAGGGTTGTTTCTGATGATGAGAGATCAGATTATGGAGGACTGATTGGATCTCGAAAACCGCCTTTACCATTGCAGCTTGTTCAACCAAGGACTAGTGGTGGTGTGAGTCTTCCTTCACCAGATTCAGTTACAAGTAGTATTGCATCTACAAATTCTTTCTCCAAGATTATTTATCATCAAGAACAAGTCCAAGGTACAAATATAGAGAACAAACCTCAAGATTCAAGTTACATGTTACCACCACAATCAGATCCAAATCAACAACTCCAACAACCACCACCACAACAACAACAATTTGTTCATCCCAACACTCACTATATCCACCACCCTACATCCACAAATCAAGTTCCAATTTCATCTTACTACCAAGTATACCCTCCACCATCACAACAATCACAACTTCATCCACAACAATATCCAGTTTATGTAATGCCTATTGGATCTACACAACAACCATATAACATGACATTGCAACATAATATAAATGACCCTAATTTGGTAGCTTCTAATAGGCCAATAATACCACAAAATGGAACTCCACCAATTTACCCTAATAAAGCACCTAACCCTAATGTGGCATCAAATTCAACATTTGTTCAAGTACCTTCAAATCAATTTCAACAACAATATGTTGGTATGCCTCAATTTCATCATCAACCACAAGTTCCTATTAATGTAGCTCCTCCTAGTGGTACCAATTATGGTTATGAATATAGTGGTAATGTGGAAGGTCAAGTGTACTATACTCAACAACAAAATAATGCTCCTTTGGTTACTCAGTACCAATCCATGACTCCTGCAGCTGCTGCTGCAGCATTATCAGATGCTTCCCAACAATTTTCTGGAGATAATGTTCAGCAGTCAAATAGAACTTCACAACCGGTATAA

Protein sequence

>Msa0997940

MDPPLISTAATTVPPNIIQQNYPESIESLSSPPPQPPPRSRVNETMHDDSFPNVPGGKLRLMCSYGGHIMPRPHDKSLCYVGGDTRIVVVDRSSSLRDLCSRLSRTILNGRPFTLKYQLPHEDLDNLITVTSDEDLDNMIEEYDRIASASSTMKASSSRLRVFLFFTKPDTTLSMGSLLDDAKSETWFVDALNNSGILSRGVSDSAGDSFVNLDNVPASDSSNNLESQVESLSLLENNNNKVKNVFDNVNAVNSTPNSPMLENSLSSSSLSPSMENLPPIRVRVDENAGSRLQQENKVVMKQDGGFVVSSANVAMAAIPAAMTMASAGVVTATSGDVNVNRVVSDDERSDYGGLIGSRKPPLPLQLVQPRTSGGVSLPSPDSVTSSIASTNSFSKIIYHQEQVQGTNIENKPQDSSYMLPPQSDPNQQLQQPPPQQQQFVHPNTHYIHHPTSTNQVPISSYYQVYPPPSQQSQLHPQQYPVYVMPIGSTQQPYNMTLQHNINDPNLVASNRPIIPQNGTPPIYPNKAPNPNVASNSTFVQVPSNQFQQQYVGMPQFHHQPQVPINVAPPSGTNYGYEYSGNVEGQVYYTQQQNNAPLVTQYQSMTPAAAAAALSDASQQFSGDNVQQSNRTSQPV*