Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1013220 | XP_024630855.2 | 48.739 | 119 | 28 | 1 | 10 | 95 | 121 | 239 | 3.36e-19 | 89.7 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1013220 | A0A072VP56 | 48.739 | 119 | 28 | 1 | 10 | 95 | 229 | 347 | 5.86e-19 | 89.7 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0009870 | Msa1013220 | 0.936608 | 1.322967e-97 | -8.615850e-47 |
| Msa0031710 | Msa1013220 | 0.804516 | 2.080401e-49 | -8.615850e-47 |
| Msa0063880 | Msa1013220 | 0.808521 | 2.973288e-50 | -8.615850e-47 |
| Msa0141980 | Msa1013220 | 0.885005 | 1.180555e-71 | -8.615850e-47 |
| Msa0405010 | Msa1013220 | 0.813812 | 2.117375e-51 | -8.615850e-47 |
| Msa1013220 | Msa1420820 | 0.806219 | 9.147720e-50 | -8.615850e-47 |
| Msa1013220 | Msa1455680 | 0.805772 | 1.135788e-49 | -8.615850e-47 |
| Msa0519520 | Msa1013220 | 0.816767 | 4.666744e-52 | -8.615850e-47 |
| Msa0842620 | Msa1013220 | 0.813239 | 2.831223e-51 | -8.615850e-47 |
| Msa0931520 | Msa1013220 | 0.807572 | 4.733688e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 11 sgRNAs with CRISPR-Local
Find 376 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GACTCCAACTAGCAAATCTT+TGG | 0.288947 | 7_1:+19601283 | Msa1013220:CDS |
| CGAAGTTGCTGCTGCTGATT+CGG | 0.386996 | 7_1:+19594943 | Msa1013220:CDS |
| GACTCCAACTAGCAAACCTT+TGG | 0.409498 | 7_1:+19594970 | Msa1013220:CDS |
| TTTCCCAAAGATTTGCTAGT+TGG | 0.458073 | 7_1:-19601287 | None:intergenic |
| ACTCCAACTAGCAAATCTTT+GGG | 0.491743 | 7_1:+19601284 | Msa1013220:CDS |
| TTTCCCAAAGGTTTGCTAGT+TGG | 0.503027 | 7_1:-19594974 | None:intergenic |
| ACTCCAACTAGCAAACCTTT+GGG | 0.520423 | 7_1:+19594971 | Msa1013220:CDS |
| TCAGTAGACGGCTTTCCCAA+AGG | 0.587701 | 7_1:-19594986 | None:intergenic |
| AATTCCACACTATCAGTAGA+CGG | 0.643683 | 7_1:-19594998 | None:intergenic |
| CATGCAGGAAAATATTGAAG+TGG | 0.661188 | 7_1:+19594901 | Msa1013220:intron |
| GTTAGCTTATCAAAATCCTG+TGG | 0.715142 | 7_1:+19594795 | Msa1013220:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTCAATAATATAAACTAA+TGG | + | chr7_1:19595472-19595491 | Msa1013220:intron | 10.0% |
| !!! | AATTTTAAGTCTAAAATTAT+TGG | - | chr7_1:19595988-19596007 | None:intergenic | 10.0% |
| !!! | AATGATTATTTTTTTGAATT+AGG | - | chr7_1:19596455-19596474 | None:intergenic | 10.0% |
| !!! | TCAAGATTTTTTTAAAAAAT+AGG | - | chr7_1:19597842-19597861 | None:intergenic | 10.0% |
| !!! | ACAATTTATTTAAAATTATG+CGG | + | chr7_1:19598045-19598064 | Msa1013220:intron | 10.0% |
| !! | AATTCAATAATATAAACTAA+TGG | + | chr7_1:19595472-19595491 | Msa1013220:intron | 10.0% |
| !!! | AATTTTAAGTCTAAAATTAT+TGG | - | chr7_1:19595988-19596007 | None:intergenic | 10.0% |
| !!! | AATGATTATTTTTTTGAATT+AGG | - | chr7_1:19596455-19596474 | None:intergenic | 10.0% |
| !!! | TCAAGATTTTTTTAAAAAAT+AGG | - | chr7_1:19597842-19597861 | None:intergenic | 10.0% |
| !!! | ACAATTTATTTAAAATTATG+CGG | + | chr7_1:19598045-19598064 | Msa1013220:intron | 10.0% |
| !! | TGAAAAATAAAGATGTTATT+TGG | - | chr7_1:19595300-19595319 | None:intergenic | 15.0% |
| !! | TATATCAAAATACGATATAT+TGG | - | chr7_1:19595697-19595716 | None:intergenic | 15.0% |
| !!! | AAAATGATAATGTTAATTGA+TGG | - | chr7_1:19596558-19596577 | None:intergenic | 15.0% |
| !!! | GAAAATTATTAATGTTTTAG+TGG | + | chr7_1:19597035-19597054 | Msa1013220:intron | 15.0% |
| !!! | TTTTTTAAAAAATAGGCTAA+AGG | - | chr7_1:19597835-19597854 | None:intergenic | 15.0% |
| !!! | TTTTTTAAAAAAATCTTGAG+TGG | + | chr7_1:19597843-19597862 | Msa1013220:intron | 15.0% |
| !!! | CAATTTATTTAAAATTATGC+GGG | + | chr7_1:19598046-19598065 | Msa1013220:intron | 15.0% |
| !! | TGAAAAATAAAGATGTTATT+TGG | - | chr7_1:19595300-19595319 | None:intergenic | 15.0% |
| !! | TATATCAAAATACGATATAT+TGG | - | chr7_1:19595697-19595716 | None:intergenic | 15.0% |
| !!! | AAAATGATAATGTTAATTGA+TGG | - | chr7_1:19596558-19596577 | None:intergenic | 15.0% |
| !!! | GAAAATTATTAATGTTTTAG+TGG | + | chr7_1:19597035-19597054 | Msa1013220:intron | 15.0% |
| !!! | TTTTTTAAAAAATAGGCTAA+AGG | - | chr7_1:19597835-19597854 | None:intergenic | 15.0% |
| !!! | TTTTTTAAAAAAATCTTGAG+TGG | + | chr7_1:19597843-19597862 | Msa1013220:intron | 15.0% |
| !!! | CAATTTATTTAAAATTATGC+GGG | + | chr7_1:19598046-19598065 | Msa1013220:intron | 15.0% |
| !! | AATTGTCAAGTTTGATTAAT+AGG | - | chr7_1:19595137-19595156 | None:intergenic | 20.0% |
| !!! | CTTTGAAATGAAATTCAAAT+TGG | - | chr7_1:19595180-19595199 | None:intergenic | 20.0% |
| !!! | ATAGAACAGATTTTTAAAAC+AGG | - | chr7_1:19595265-19595284 | None:intergenic | 20.0% |
| !!! | TTGTTGCTGAAATAAATTTT+AGG | - | chr7_1:19595611-19595630 | None:intergenic | 20.0% |
| !! | AGAGAACAAAAATAGAATTA+TGG | - | chr7_1:19595952-19595971 | None:intergenic | 20.0% |
| !!! | GATTTTATGATACACTAATA+AGG | + | chr7_1:19596426-19596445 | Msa1013220:intron | 20.0% |
| !!! | GAGAAAATTTTTAAAGTATG+GGG | - | chr7_1:19596910-19596929 | None:intergenic | 20.0% |
| !!! | GGAGAAAATTTTTAAAGTAT+GGG | - | chr7_1:19596911-19596930 | None:intergenic | 20.0% |
| !!! | TGGAGAAAATTTTTAAAGTA+TGG | - | chr7_1:19596912-19596931 | None:intergenic | 20.0% |
| !!! | AGTACCAGTTTTATTAATTT+CGG | - | chr7_1:19596950-19596969 | None:intergenic | 20.0% |
| !! | AAATTTATTCAATTCAAGCT+TGG | - | chr7_1:19597459-19597478 | None:intergenic | 20.0% |
| !!! | TTATGTCTTTTTAACTTGAA+GGG | - | chr7_1:19597885-19597904 | None:intergenic | 20.0% |
| !!! | ATTATGTCTTTTTAACTTGA+AGG | - | chr7_1:19597886-19597905 | None:intergenic | 20.0% |
| !! | AATTAAATGGTACGAATTAA+CGG | - | chr7_1:19597915-19597934 | None:intergenic | 20.0% |
| !! | AATTGTCAAGTTTGATTAAT+AGG | - | chr7_1:19595137-19595156 | None:intergenic | 20.0% |
| !!! | CTTTGAAATGAAATTCAAAT+TGG | - | chr7_1:19595180-19595199 | None:intergenic | 20.0% |
| !!! | ATAGAACAGATTTTTAAAAC+AGG | - | chr7_1:19595265-19595284 | None:intergenic | 20.0% |
| !! | AGAGAACAAAAATAGAATTA+TGG | - | chr7_1:19595952-19595971 | None:intergenic | 20.0% |
| !!! | GATTTTATGATACACTAATA+AGG | + | chr7_1:19596426-19596445 | Msa1013220:intron | 20.0% |
| !!! | GAGAAAATTTTTAAAGTATG+GGG | - | chr7_1:19596910-19596929 | None:intergenic | 20.0% |
| !!! | GGAGAAAATTTTTAAAGTAT+GGG | - | chr7_1:19596911-19596930 | None:intergenic | 20.0% |
| !!! | TGGAGAAAATTTTTAAAGTA+TGG | - | chr7_1:19596912-19596931 | None:intergenic | 20.0% |
| !!! | AGTACCAGTTTTATTAATTT+CGG | - | chr7_1:19596950-19596969 | None:intergenic | 20.0% |
| !! | AAATTTATTCAATTCAAGCT+TGG | - | chr7_1:19597459-19597478 | None:intergenic | 20.0% |
| !!! | TTATGTCTTTTTAACTTGAA+GGG | - | chr7_1:19597885-19597904 | None:intergenic | 20.0% |
| !!! | ATTATGTCTTTTTAACTTGA+AGG | - | chr7_1:19597886-19597905 | None:intergenic | 20.0% |
| !! | AATTAAATGGTACGAATTAA+CGG | - | chr7_1:19597915-19597934 | None:intergenic | 20.0% |
| ! | GCTCAAAAAAAGAAATCAAA+AGG | - | chr7_1:19594729-19594748 | None:intergenic | 25.0% |
| !!! | TTGATTTCTTTTTTTGAGCT+TGG | + | chr7_1:19594730-19594749 | Msa1013220:CDS | 25.0% |
| ! | TGATCAAAAAAATATACCAC+AGG | - | chr7_1:19594814-19594833 | None:intergenic | 25.0% |
| ! | ATCATTTCTGCAGTTTATAA+AGG | + | chr7_1:19594830-19594849 | Msa1013220:intron | 25.0% |
| ! | TTAAAACAGGATTTACATCT+TGG | - | chr7_1:19595252-19595271 | None:intergenic | 25.0% |
| ! | GCAATATCCATATAATAGAA+TGG | + | chr7_1:19595494-19595513 | Msa1013220:intron | 25.0% |
| !!! | GCTGAAATAAATTTTAGGAT+TGG | - | chr7_1:19595606-19595625 | None:intergenic | 25.0% |
| ! | TTTCCGATACTAACTAATTT+CGG | + | chr7_1:19595759-19595778 | Msa1013220:intron | 25.0% |
| ! | TTTATCAATAGTTGGAAATG+AGG | - | chr7_1:19595816-19595835 | None:intergenic | 25.0% |
| !! | ATGGGTATTTTATCAATAGT+TGG | - | chr7_1:19595824-19595843 | None:intergenic | 25.0% |
| !! | TGTTTAGAATGAATTAGCTA+CGG | - | chr7_1:19595858-19595877 | None:intergenic | 25.0% |
| ! | AAAATAGAATTATGGAACCA+AGG | - | chr7_1:19595944-19595963 | None:intergenic | 25.0% |
| ! | GTTTATGCTAGTATAAATGT+TGG | - | chr7_1:19596386-19596405 | None:intergenic | 25.0% |
| ! | GTTCAAGTACAATACATAAA+TGG | + | chr7_1:19596516-19596535 | Msa1013220:intron | 25.0% |
| !!! | GTTAATTGATGGATTGATTT+AGG | - | chr7_1:19596547-19596566 | None:intergenic | 25.0% |
| !!! | TAATGATTTTTGAGCTTAGT+AGG | - | chr7_1:19596790-19596809 | None:intergenic | 25.0% |
| ! | ATAGAATTTGTGCAGAATAT+GGG | - | chr7_1:19596881-19596900 | None:intergenic | 25.0% |
| ! | TATAGAATTTGTGCAGAATA+TGG | - | chr7_1:19596882-19596901 | None:intergenic | 25.0% |
| ! | TGAACCGAAATTAATAAAAC+TGG | + | chr7_1:19596943-19596962 | Msa1013220:intron | 25.0% |
| !! | TCATGTGATTTTTAATGCTA+TGG | - | chr7_1:19596999-19597018 | None:intergenic | 25.0% |
| !! | ATAATTTTCTCTCTGTAATC+TGG | - | chr7_1:19597024-19597043 | None:intergenic | 25.0% |
| ! | TTCTGCAGAAAATATACTTA+CGG | - | chr7_1:19597077-19597096 | None:intergenic | 25.0% |
| !! | GAAATTTATATCCGATTTGA+AGG | + | chr7_1:19597149-19597168 | Msa1013220:intron | 25.0% |
| ! | TCATTCAATTTCCTTCAAAT+CGG | - | chr7_1:19597163-19597182 | None:intergenic | 25.0% |
| !! | TTATAGATGAAAAGCATGTT+TGG | - | chr7_1:19597300-19597319 | None:intergenic | 25.0% |
| ! | TTTGTAAATTGTTCATGAGT+AGG | - | chr7_1:19597324-19597343 | None:intergenic | 25.0% |
| ! | AAGATGATTATGTGTAGTAA+TGG | - | chr7_1:19597415-19597434 | None:intergenic | 25.0% |
| !!! | TTTTAACTTGAAGGGTATTT+TGG | - | chr7_1:19597877-19597896 | None:intergenic | 25.0% |
| ! | ATCTCGTAATATTATTCCAA+CGG | - | chr7_1:19597946-19597965 | None:intergenic | 25.0% |
| !! | AGAACGGAAATAATTTTCAA+AGG | - | chr7_1:19598008-19598027 | None:intergenic | 25.0% |
| ! | AAGTAAATCCTTAAATTTCG+AGG | - | chr7_1:19598106-19598125 | None:intergenic | 25.0% |
| ! | TTAAAACAGGATTTACATCT+TGG | - | chr7_1:19595252-19595271 | None:intergenic | 25.0% |
| ! | GCAATATCCATATAATAGAA+TGG | + | chr7_1:19595494-19595513 | Msa1013220:intron | 25.0% |
| !!! | GCTGAAATAAATTTTAGGAT+TGG | - | chr7_1:19595606-19595625 | None:intergenic | 25.0% |
| !! | TTGTCGCTGAAATAAATTTT+AGG | - | chr7_1:19598757-19598776 | None:intergenic | 25.0% |
| ! | TTTCCGATACTAACTAATTT+CGG | + | chr7_1:19595759-19595778 | Msa1013220:intron | 25.0% |
| ! | TTTATCAATAGTTGGAAATG+AGG | - | chr7_1:19595816-19595835 | None:intergenic | 25.0% |
| !! | ATGGGTATTTTATCAATAGT+TGG | - | chr7_1:19595824-19595843 | None:intergenic | 25.0% |
| !! | TGTTTAGAATGAATTAGCTA+CGG | - | chr7_1:19595858-19595877 | None:intergenic | 25.0% |
| ! | AAAATAGAATTATGGAACCA+AGG | - | chr7_1:19595944-19595963 | None:intergenic | 25.0% |
| ! | GTTTATGCTAGTATAAATGT+TGG | - | chr7_1:19596386-19596405 | None:intergenic | 25.0% |
| ! | GTTCAAGTACAATACATAAA+TGG | + | chr7_1:19596516-19596535 | Msa1013220:intron | 25.0% |
| !!! | GTTAATTGATGGATTGATTT+AGG | - | chr7_1:19596547-19596566 | None:intergenic | 25.0% |
| !!! | TAATGATTTTTGAGCTTAGT+AGG | - | chr7_1:19596790-19596809 | None:intergenic | 25.0% |
| ! | ATAGAATTTGTGCAGAATAT+GGG | - | chr7_1:19596881-19596900 | None:intergenic | 25.0% |
| ! | TATAGAATTTGTGCAGAATA+TGG | - | chr7_1:19596882-19596901 | None:intergenic | 25.0% |
| ! | TGAACCGAAATTAATAAAAC+TGG | + | chr7_1:19596943-19596962 | Msa1013220:intron | 25.0% |
| !! | TCATGTGATTTTTAATGCTA+TGG | - | chr7_1:19596999-19597018 | None:intergenic | 25.0% |
| !! | ATAATTTTCTCTCTGTAATC+TGG | - | chr7_1:19597024-19597043 | None:intergenic | 25.0% |
| ! | TTCTGCAGAAAATATACTTA+CGG | - | chr7_1:19597077-19597096 | None:intergenic | 25.0% |
| !! | GAAATTTATATCCGATTTGA+AGG | + | chr7_1:19597149-19597168 | Msa1013220:intron | 25.0% |
| ! | TCATTCAATTTCCTTCAAAT+CGG | - | chr7_1:19597163-19597182 | None:intergenic | 25.0% |
| !! | TTATAGATGAAAAGCATGTT+TGG | - | chr7_1:19597300-19597319 | None:intergenic | 25.0% |
| ! | TTTGTAAATTGTTCATGAGT+AGG | - | chr7_1:19597324-19597343 | None:intergenic | 25.0% |
| ! | AAGATGATTATGTGTAGTAA+TGG | - | chr7_1:19597415-19597434 | None:intergenic | 25.0% |
| !!! | TTTTAACTTGAAGGGTATTT+TGG | - | chr7_1:19597877-19597896 | None:intergenic | 25.0% |
| ! | ATCTCGTAATATTATTCCAA+CGG | - | chr7_1:19597946-19597965 | None:intergenic | 25.0% |
| !! | AGAACGGAAATAATTTTCAA+AGG | - | chr7_1:19598008-19598027 | None:intergenic | 25.0% |
| TGGAAATGTTGAAAATACAG+AGG | - | chr7_1:19595232-19595251 | None:intergenic | 30.0% | |
| ! | AAGATGTTATTTGGAGATTC+TGG | - | chr7_1:19595291-19595310 | None:intergenic | 30.0% |
| TGAGGTTCCATTCTATTATA+TGG | - | chr7_1:19595504-19595523 | None:intergenic | 30.0% | |
| CATTGTTAATGGAATTCATG+AGG | - | chr7_1:19595522-19595541 | None:intergenic | 30.0% | |
| CTCATGAATTCCATTAACAA+TGG | + | chr7_1:19595520-19595539 | Msa1013220:intron | 30.0% | |
| TTTATCCTTGCCATTGTTAA+TGG | - | chr7_1:19595533-19595552 | None:intergenic | 30.0% | |
| GATTGTGATTGATATGATTG+TGG | - | chr7_1:19595668-19595687 | None:intergenic | 30.0% | |
| TAGCCGAAATTAGTTAGTAT+CGG | - | chr7_1:19595765-19595784 | None:intergenic | 30.0% | |
| TGCTATGTTAGTATTCATGT+TGG | + | chr7_1:19595901-19595920 | Msa1013220:intron | 30.0% | |
| TATGTTAGTATTCATGTTGG+AGG | + | chr7_1:19595904-19595923 | Msa1013220:intron | 30.0% | |
| ATGTTAGTATTCATGTTGGA+GGG | + | chr7_1:19595905-19595924 | Msa1013220:intron | 30.0% | |
| ATGCTAGTATAAATGTTGGA+GGG | - | chr7_1:19596382-19596401 | None:intergenic | 30.0% | |
| TATGCTAGTATAAATGTTGG+AGG | - | chr7_1:19596383-19596402 | None:intergenic | 30.0% | |
| TGTTGTAAAGTTGTTGAGTT+GGG | - | chr7_1:19596489-19596508 | None:intergenic | 30.0% | |
| AACAACTTTACAACACTAAC+AGG | + | chr7_1:19596494-19596513 | Msa1013220:intron | 30.0% | |
| TTGTGTTAGTGATAGAAAGT+AGG | - | chr7_1:19596589-19596608 | None:intergenic | 30.0% | |
| TTAATTTCGGTTCAGTATTG+AGG | - | chr7_1:19596937-19596956 | None:intergenic | 30.0% | |
| AAAATATACTTACGGGTTCT+GGG | - | chr7_1:19597069-19597088 | None:intergenic | 30.0% | |
| TCTGCAGAAAATATACTTAC+GGG | - | chr7_1:19597076-19597095 | None:intergenic | 30.0% | |
| ! | TCATGAAAATTAAGAAGTGC+AGG | - | chr7_1:19597253-19597272 | None:intergenic | 30.0% |
| ! | AAAGCATGTTTGGAATTGTA+GGG | - | chr7_1:19597290-19597309 | None:intergenic | 30.0% |
| ! | AAAAGCATGTTTGGAATTGT+AGG | - | chr7_1:19597291-19597310 | None:intergenic | 30.0% |
| !! | CAAAGAATGGATTAATCACA+AGG | - | chr7_1:19597507-19597526 | None:intergenic | 30.0% |
| CTTGTGATTAATCCATTCTT+TGG | + | chr7_1:19597505-19597524 | Msa1013220:intron | 30.0% | |
| TGAAGGTTATGAAAATCATG+AGG | + | chr7_1:19597577-19597596 | Msa1013220:intron | 30.0% | |
| ! | ATTTTTCACCCAAATCATCA+TGG | - | chr7_1:19597704-19597723 | None:intergenic | 30.0% |
| ATTTGGGTGAAAAATTGTGA+GGG | + | chr7_1:19597709-19597728 | Msa1013220:intron | 30.0% | |
| !! | AAGAGAAAAATGTTCTAGAG+TGG | + | chr7_1:19597774-19597793 | Msa1013220:intron | 30.0% |
| TCTCGTAATATTATTCCAAC+GGG | - | chr7_1:19597945-19597964 | None:intergenic | 30.0% | |
| AATTTCGTCCTCGAAATTTA+AGG | + | chr7_1:19598095-19598114 | Msa1013220:intron | 30.0% | |
| ! | AATCTAAAGTTGAAAGTTGG+AGG | - | chr7_1:19598149-19598168 | None:intergenic | 30.0% |
| ! | TGGAATCTAAAGTTGAAAGT+TGG | - | chr7_1:19598152-19598171 | None:intergenic | 30.0% |
| TGGAAATGTTGAAAATACAG+AGG | - | chr7_1:19595232-19595251 | None:intergenic | 30.0% | |
| ! | AAGATGTTATTTGGAGATTC+TGG | - | chr7_1:19595291-19595310 | None:intergenic | 30.0% |
| TGAGGTTCCATTCTATTATA+TGG | - | chr7_1:19595504-19595523 | None:intergenic | 30.0% | |
| CATTGTTAATGGAATTCATG+AGG | - | chr7_1:19595522-19595541 | None:intergenic | 30.0% | |
| CTCATGAATTCCATTAACAA+TGG | + | chr7_1:19595520-19595539 | Msa1013220:intron | 30.0% | |
| TTTATCCTTGCCATTGTTAA+TGG | - | chr7_1:19595533-19595552 | None:intergenic | 30.0% | |
| GATTGTGATTGATATGATTG+TGG | - | chr7_1:19595668-19595687 | None:intergenic | 30.0% | |
| TAGCCGAAATTAGTTAGTAT+CGG | - | chr7_1:19595765-19595784 | None:intergenic | 30.0% | |
| TGCTATGTTAGTATTCATGT+TGG | + | chr7_1:19595901-19595920 | Msa1013220:intron | 30.0% | |
| TATGTTAGTATTCATGTTGG+AGG | + | chr7_1:19595904-19595923 | Msa1013220:intron | 30.0% | |
| ATGTTAGTATTCATGTTGGA+GGG | + | chr7_1:19595905-19595924 | Msa1013220:intron | 30.0% | |
| ATGCTAGTATAAATGTTGGA+GGG | - | chr7_1:19596382-19596401 | None:intergenic | 30.0% | |
| TATGCTAGTATAAATGTTGG+AGG | - | chr7_1:19596383-19596402 | None:intergenic | 30.0% | |
| TGTTGTAAAGTTGTTGAGTT+GGG | - | chr7_1:19596489-19596508 | None:intergenic | 30.0% | |
| AACAACTTTACAACACTAAC+AGG | + | chr7_1:19596494-19596513 | Msa1013220:intron | 30.0% | |
| TTGTGTTAGTGATAGAAAGT+AGG | - | chr7_1:19596589-19596608 | None:intergenic | 30.0% | |
| TTAATTTCGGTTCAGTATTG+AGG | - | chr7_1:19596937-19596956 | None:intergenic | 30.0% | |
| AAAATATACTTACGGGTTCT+GGG | - | chr7_1:19597069-19597088 | None:intergenic | 30.0% | |
| TCTGCAGAAAATATACTTAC+GGG | - | chr7_1:19597076-19597095 | None:intergenic | 30.0% | |
| ! | TCATGAAAATTAAGAAGTGC+AGG | - | chr7_1:19597253-19597272 | None:intergenic | 30.0% |
| ! | AAAGCATGTTTGGAATTGTA+GGG | - | chr7_1:19597290-19597309 | None:intergenic | 30.0% |
| ! | AAAAGCATGTTTGGAATTGT+AGG | - | chr7_1:19597291-19597310 | None:intergenic | 30.0% |
| !! | CAAAGAATGGATTAATCACA+AGG | - | chr7_1:19597507-19597526 | None:intergenic | 30.0% |
| CTTGTGATTAATCCATTCTT+TGG | + | chr7_1:19597505-19597524 | Msa1013220:intron | 30.0% | |
| TGAAGGTTATGAAAATCATG+AGG | + | chr7_1:19597577-19597596 | Msa1013220:intron | 30.0% | |
| ! | ATTTTTCACCCAAATCATCA+TGG | - | chr7_1:19597704-19597723 | None:intergenic | 30.0% |
| ATTTGGGTGAAAAATTGTGA+GGG | + | chr7_1:19597709-19597728 | Msa1013220:intron | 30.0% | |
| !! | AAGAGAAAAATGTTCTAGAG+TGG | + | chr7_1:19597774-19597793 | Msa1013220:intron | 30.0% |
| TCTCGTAATATTATTCCAAC+GGG | - | chr7_1:19597945-19597964 | None:intergenic | 30.0% | |
| ! | GTTAGCTTATCAAAATCCTG+TGG | + | chr7_1:19594795-19594814 | Msa1013220:CDS | 35.0% |
| CATGCAGGAAAATATTGAAG+TGG | + | chr7_1:19594901-19594920 | Msa1013220:intron | 35.0% | |
| AATTCCACACTATCAGTAGA+CGG | - | chr7_1:19595001-19595020 | None:intergenic | 35.0% | |
| AGTTTGATTAATAGGCTTGC+CGG | - | chr7_1:19595129-19595148 | None:intergenic | 35.0% | |
| ! | TTGACGCATATTGATGACAT+AGG | - | chr7_1:19595438-19595457 | None:intergenic | 35.0% |
| GAATTCCATTAACAATGGCA+AGG | + | chr7_1:19595525-19595544 | Msa1013220:intron | 35.0% | |
| GAAATGAGGAATGTTAGCTA+TGG | - | chr7_1:19595802-19595821 | None:intergenic | 35.0% | |
| ! | AGGGTTCTTAGAATTTTCCT+TGG | + | chr7_1:19595924-19595943 | Msa1013220:intron | 35.0% |
| ATAATGTAGCCTATGAGGTA+CGG | - | chr7_1:19596048-19596067 | None:intergenic | 35.0% | |
| TTATCTCTCGTTGTAGCAAA+CGG | + | chr7_1:19596064-19596083 | Msa1013220:intron | 35.0% | |
| ATAATGTAGCCTATGACGTA+CGG | - | chr7_1:19596101-19596120 | None:intergenic | 35.0% | |
| TTATCTCTCGTTGTAGCAAA+CGG | + | chr7_1:19596064-19596083 | Msa1013220:intron | 35.0% | |
| ATAATGTAGCCTATGACGTA+CGG | - | chr7_1:19596101-19596120 | None:intergenic | 35.0% | |
| TTATCTCTCGTTGTAGCAAA+CGG | + | chr7_1:19596064-19596083 | Msa1013220:intron | 35.0% | |
| ATAATGTAGCCTATGACGTA+CGG | - | chr7_1:19596101-19596120 | None:intergenic | 35.0% | |
| TTATCTCTCGTTGTAGCAAA+CGG | + | chr7_1:19596064-19596083 | Msa1013220:intron | 35.0% | |
| TCTATGAGCATGTTACTCAT+AGG | + | chr7_1:19596294-19596313 | Msa1013220:intron | 35.0% | |
| GTGTTGTAAAGTTGTTGAGT+TGG | - | chr7_1:19596490-19596509 | None:intergenic | 35.0% | |
| GTCCAAAACATGCAATTGAA+AGG | + | chr7_1:19596634-19596653 | Msa1013220:intron | 35.0% | |
| ! | TGCCTTTCAATTGCATGTTT+TGG | - | chr7_1:19596639-19596658 | None:intergenic | 35.0% |
| CCTATGAATTTCATGTTGCT+TGG | - | chr7_1:19596733-19596752 | None:intergenic | 35.0% | |
| CCAAGCAACATGAAATTCAT+AGG | + | chr7_1:19596730-19596749 | Msa1013220:intron | 35.0% | |
| ! | ATGGTTAGCTAGCGAAATTA+TGG | - | chr7_1:19596980-19596999 | None:intergenic | 35.0% |
| GAAAATATACTTACGGGTTC+TGG | - | chr7_1:19597070-19597089 | None:intergenic | 35.0% | |
| TTTCCGAGTTCATTGCTAAA+CGG | + | chr7_1:19597118-19597137 | Msa1013220:intron | 35.0% | |
| ATTCCGTTTAGCAATGAACT+CGG | - | chr7_1:19597124-19597143 | None:intergenic | 35.0% | |
| ! | AAAATTAAGAAGTGCAGGTC+TGG | - | chr7_1:19597248-19597267 | None:intergenic | 35.0% |
| ! | GTTTGGAATTGTAGGGATTA+TGG | - | chr7_1:19597283-19597302 | None:intergenic | 35.0% |
| AAGCAATGGTGTGTGAATTT+AGG | - | chr7_1:19597354-19597373 | None:intergenic | 35.0% | |
| TGATAGAAAGCTAGAAGCAA+TGG | - | chr7_1:19597368-19597387 | None:intergenic | 35.0% | |
| ! | TGTATTAGAGCACCAAAGAA+TGG | - | chr7_1:19597520-19597539 | None:intergenic | 35.0% |
| ! | CATTTTCATTCAAGCCTCAT+GGG | - | chr7_1:19597559-19597578 | None:intergenic | 35.0% |
| ! | TCATTTTCATTCAAGCCTCA+TGG | - | chr7_1:19597560-19597579 | None:intergenic | 35.0% |
| TGAGGCTTGAATGAAAATGA+AGG | + | chr7_1:19597560-19597579 | Msa1013220:intron | 35.0% | |
| AGGTTATGAAAATCATGAGG+AGG | + | chr7_1:19597580-19597599 | Msa1013220:intron | 35.0% | |
| GGTTATGAAAATCATGAGGA+GGG | + | chr7_1:19597581-19597600 | Msa1013220:intron | 35.0% | |
| GTTATGAAAATCATGAGGAG+GGG | + | chr7_1:19597582-19597601 | Msa1013220:intron | 35.0% | |
| TTATGAAAATCATGAGGAGG+GGG | + | chr7_1:19597583-19597602 | Msa1013220:intron | 35.0% | |
| TGTATGACTCCATGATGATT+TGG | + | chr7_1:19597692-19597711 | Msa1013220:intron | 35.0% | |
| GTATGACTCCATGATGATTT+GGG | + | chr7_1:19597693-19597712 | Msa1013220:intron | 35.0% | |
| GATTTGGGTGAAAAATTGTG+AGG | + | chr7_1:19597708-19597727 | Msa1013220:intron | 35.0% | |
| GTGAAAAATTGTGAGGGTTA+TGG | + | chr7_1:19597715-19597734 | Msa1013220:intron | 35.0% | |
| AAAAATTGTGAGGGTTATGG+TGG | + | chr7_1:19597718-19597737 | Msa1013220:intron | 35.0% | |
| TGTAGAAACATGAGGAAAAG+TGG | + | chr7_1:19597797-19597816 | Msa1013220:intron | 35.0% | |
| TAAATGGTACGAATTAACGG+AGG | - | chr7_1:19597912-19597931 | None:intergenic | 35.0% | |
| ! | AACGGGCTTGAGAAATTAAA+TGG | - | chr7_1:19597928-19597947 | None:intergenic | 35.0% |
| ! | ATTTAATTTCTCAAGCCCGT+TGG | + | chr7_1:19597927-19597946 | Msa1013220:intron | 35.0% |
| GTATCAGTTACATGTCAGAA+CGG | - | chr7_1:19598024-19598043 | None:intergenic | 35.0% | |
| ! | AGGACGAAATTTCTTTAAGG+GGG | - | chr7_1:19598086-19598105 | None:intergenic | 35.0% |
| GAGGACGAAATTTCTTTAAG+GGG | - | chr7_1:19598087-19598106 | None:intergenic | 35.0% | |
| CGAGGACGAAATTTCTTTAA+GGG | - | chr7_1:19598088-19598107 | None:intergenic | 35.0% | |
| TCGAGGACGAAATTTCTTTA+AGG | - | chr7_1:19598089-19598108 | None:intergenic | 35.0% | |
| CTTTAGATTCCATTAACCCA+AGG | + | chr7_1:19598160-19598179 | Msa1013220:intron | 35.0% | |
| AGTTTGATTAATAGGCTTGC+CGG | - | chr7_1:19595129-19595148 | None:intergenic | 35.0% | |
| ! | TTGACGCATATTGATGACAT+AGG | - | chr7_1:19595438-19595457 | None:intergenic | 35.0% |
| GAATTCCATTAACAATGGCA+AGG | + | chr7_1:19595525-19595544 | Msa1013220:intron | 35.0% | |
| GAAATGAGGAATGTTAGCTA+TGG | - | chr7_1:19595802-19595821 | None:intergenic | 35.0% | |
| ! | AGGGTTCTTAGAATTTTCCT+TGG | + | chr7_1:19595924-19595943 | Msa1013220:intron | 35.0% |
| ATAATGTAGCCTATGAGGTA+CGG | - | chr7_1:19596048-19596067 | None:intergenic | 35.0% | |
| TTATCTCTCGTTGTAGCAAA+CGG | + | chr7_1:19596064-19596083 | Msa1013220:intron | 35.0% | |
| ATAATGTAGCCTATGACGTA+CGG | - | chr7_1:19596101-19596120 | None:intergenic | 35.0% | |
| TTATCTCTCGTTGTAGCAAA+CGG | + | chr7_1:19596064-19596083 | Msa1013220:intron | 35.0% | |
| ATAATGTAGCCTATGACGTA+CGG | - | chr7_1:19596101-19596120 | None:intergenic | 35.0% | |
| TTATCTCTCGTTGTAGCAAA+CGG | + | chr7_1:19596064-19596083 | Msa1013220:intron | 35.0% | |
| ATAATGTAGCCTATGACGTA+CGG | - | chr7_1:19596101-19596120 | None:intergenic | 35.0% | |
| TTATCTCTCGTTGTAGCAAA+CGG | + | chr7_1:19596064-19596083 | Msa1013220:intron | 35.0% | |
| TCTATGAGCATGTTACTCAT+AGG | + | chr7_1:19596294-19596313 | Msa1013220:intron | 35.0% | |
| GTGTTGTAAAGTTGTTGAGT+TGG | - | chr7_1:19596490-19596509 | None:intergenic | 35.0% | |
| GTCCAAAACATGCAATTGAA+AGG | + | chr7_1:19596634-19596653 | Msa1013220:intron | 35.0% | |
| ! | TGCCTTTCAATTGCATGTTT+TGG | - | chr7_1:19596639-19596658 | None:intergenic | 35.0% |
| CCTATGAATTTCATGTTGCT+TGG | - | chr7_1:19596733-19596752 | None:intergenic | 35.0% | |
| CCAAGCAACATGAAATTCAT+AGG | + | chr7_1:19596730-19596749 | Msa1013220:intron | 35.0% | |
| ! | ATGGTTAGCTAGCGAAATTA+TGG | - | chr7_1:19596980-19596999 | None:intergenic | 35.0% |
| GAAAATATACTTACGGGTTC+TGG | - | chr7_1:19597070-19597089 | None:intergenic | 35.0% | |
| TTTCCGAGTTCATTGCTAAA+CGG | + | chr7_1:19597118-19597137 | Msa1013220:intron | 35.0% | |
| ATTCCGTTTAGCAATGAACT+CGG | - | chr7_1:19597124-19597143 | None:intergenic | 35.0% | |
| ! | AAAATTAAGAAGTGCAGGTC+TGG | - | chr7_1:19597248-19597267 | None:intergenic | 35.0% |
| ! | GTTTGGAATTGTAGGGATTA+TGG | - | chr7_1:19597283-19597302 | None:intergenic | 35.0% |
| AAGCAATGGTGTGTGAATTT+AGG | - | chr7_1:19597354-19597373 | None:intergenic | 35.0% | |
| TGATAGAAAGCTAGAAGCAA+TGG | - | chr7_1:19597368-19597387 | None:intergenic | 35.0% | |
| ! | TGTATTAGAGCACCAAAGAA+TGG | - | chr7_1:19597520-19597539 | None:intergenic | 35.0% |
| ! | CATTTTCATTCAAGCCTCAT+GGG | - | chr7_1:19597559-19597578 | None:intergenic | 35.0% |
| ! | TCATTTTCATTCAAGCCTCA+TGG | - | chr7_1:19597560-19597579 | None:intergenic | 35.0% |
| TGAGGCTTGAATGAAAATGA+AGG | + | chr7_1:19597560-19597579 | Msa1013220:intron | 35.0% | |
| AGGTTATGAAAATCATGAGG+AGG | + | chr7_1:19597580-19597599 | Msa1013220:intron | 35.0% | |
| GGTTATGAAAATCATGAGGA+GGG | + | chr7_1:19597581-19597600 | Msa1013220:intron | 35.0% | |
| GTTATGAAAATCATGAGGAG+GGG | + | chr7_1:19597582-19597601 | Msa1013220:intron | 35.0% | |
| TTATGAAAATCATGAGGAGG+GGG | + | chr7_1:19597583-19597602 | Msa1013220:intron | 35.0% | |
| TGTATGACTCCATGATGATT+TGG | + | chr7_1:19597692-19597711 | Msa1013220:intron | 35.0% | |
| GTATGACTCCATGATGATTT+GGG | + | chr7_1:19597693-19597712 | Msa1013220:intron | 35.0% | |
| GATTTGGGTGAAAAATTGTG+AGG | + | chr7_1:19597708-19597727 | Msa1013220:intron | 35.0% | |
| GTGAAAAATTGTGAGGGTTA+TGG | + | chr7_1:19597715-19597734 | Msa1013220:intron | 35.0% | |
| AAAAATTGTGAGGGTTATGG+TGG | + | chr7_1:19597718-19597737 | Msa1013220:intron | 35.0% | |
| TGTAGAAACATGAGGAAAAG+TGG | + | chr7_1:19597797-19597816 | Msa1013220:intron | 35.0% | |
| TAAATGGTACGAATTAACGG+AGG | - | chr7_1:19597912-19597931 | None:intergenic | 35.0% | |
| ! | AACGGGCTTGAGAAATTAAA+TGG | - | chr7_1:19597928-19597947 | None:intergenic | 35.0% |
| ! | ATTTAATTTCTCAAGCCCGT+TGG | + | chr7_1:19597927-19597946 | Msa1013220:intron | 35.0% |
| GTATCAGTTACATGTCAGAA+CGG | - | chr7_1:19598024-19598043 | None:intergenic | 35.0% | |
| ACTCCAACTAGCAAATCTTT+GGG | + | chr7_1:19601284-19601303 | Msa1013220:CDS | 35.0% | |
| !! | TTTCCCAAAGATTTGCTAGT+TGG | - | chr7_1:19601290-19601309 | None:intergenic | 35.0% |
| !! | ATCACTTTTCTCATGCATGC+AGG | + | chr7_1:19594886-19594905 | Msa1013220:intron | 40.0% |
| ACTCCAACTAGCAAACCTTT+GGG | + | chr7_1:19594971-19594990 | Msa1013220:CDS | 40.0% | |
| !! | TTTCCCAAAGGTTTGCTAGT+TGG | - | chr7_1:19594977-19594996 | None:intergenic | 40.0% |
| !! | GTTGTTGTGCATAGTTCTGA+TGG | + | chr7_1:19595031-19595050 | Msa1013220:intron | 40.0% |
| !! | CGGTCACGATGATTGTTTTT+GGG | - | chr7_1:19595082-19595101 | None:intergenic | 40.0% |
| CCAAAAACAATCATCGTGAC+CGG | + | chr7_1:19595080-19595099 | Msa1013220:intron | 40.0% | |
| GTTTGATTAATAGGCTTGCC+GGG | - | chr7_1:19595128-19595147 | None:intergenic | 40.0% | |
| TTGCTTCCTCTGATGCTATA+GGG | - | chr7_1:19595569-19595588 | None:intergenic | 40.0% | |
| ATTGCTTCCTCTGATGCTAT+AGG | - | chr7_1:19595570-19595589 | None:intergenic | 40.0% | |
| CTAATTTCGGCTAACTAAGC+CGG | + | chr7_1:19595772-19595791 | Msa1013220:intron | 40.0% | |
| GAATGTTAGCTATGGAACTC+CGG | - | chr7_1:19595794-19595813 | None:intergenic | 40.0% | |
| GAGAGATAATGTAGCCTATG+AGG | - | chr7_1:19596053-19596072 | None:intergenic | 40.0% | |
| TAATGTAGCCTATGACGTAC+GGG | - | chr7_1:19596100-19596119 | None:intergenic | 40.0% | |
| TAATGTAGCCTATGACGTAC+GGG | - | chr7_1:19596100-19596119 | None:intergenic | 40.0% | |
| TAATGTAGCCTATGACGTAC+GGG | - | chr7_1:19596100-19596119 | None:intergenic | 40.0% | |
| TGCAATTGAAAGGCAAGACA+TGG | + | chr7_1:19596644-19596663 | Msa1013220:intron | 40.0% | |
| CTCATAAGCTAATTCCCATG+AGG | + | chr7_1:19597542-19597561 | Msa1013220:intron | 40.0% | |
| TGTATATGAGCTTCTAGTGG+TGG | - | chr7_1:19597664-19597683 | None:intergenic | 40.0% | |
| GCATGTATATGAGCTTCTAG+TGG | - | chr7_1:19597667-19597686 | None:intergenic | 40.0% | |
| TAGAGTGGTGTAGAAACATG+AGG | + | chr7_1:19597789-19597808 | Msa1013220:intron | 40.0% | |
| ! | GGACGAAATTTCTTTAAGGG+GGG | - | chr7_1:19598085-19598104 | None:intergenic | 40.0% |
| !!! | TTTTTGGGTCGTGACAAAGT+TGG | - | chr7_1:19598213-19598232 | None:intergenic | 40.0% |
| !! | CGGTCACGATGATTGTTTTT+GGG | - | chr7_1:19595082-19595101 | None:intergenic | 40.0% |
| CCAAAAACAATCATCGTGAC+CGG | + | chr7_1:19595080-19595099 | Msa1013220:intron | 40.0% | |
| GTTTGATTAATAGGCTTGCC+GGG | - | chr7_1:19595128-19595147 | None:intergenic | 40.0% | |
| CTAATTTCGGCTAACTAAGC+CGG | + | chr7_1:19595772-19595791 | Msa1013220:intron | 40.0% | |
| GAATGTTAGCTATGGAACTC+CGG | - | chr7_1:19595794-19595813 | None:intergenic | 40.0% | |
| GAGAGATAATGTAGCCTATG+AGG | - | chr7_1:19596053-19596072 | None:intergenic | 40.0% | |
| TAATGTAGCCTATGACGTAC+GGG | - | chr7_1:19596100-19596119 | None:intergenic | 40.0% | |
| TAATGTAGCCTATGACGTAC+GGG | - | chr7_1:19596100-19596119 | None:intergenic | 40.0% | |
| TAATGTAGCCTATGACGTAC+GGG | - | chr7_1:19596100-19596119 | None:intergenic | 40.0% | |
| TGCAATTGAAAGGCAAGACA+TGG | + | chr7_1:19596644-19596663 | Msa1013220:intron | 40.0% | |
| CTCATAAGCTAATTCCCATG+AGG | + | chr7_1:19597542-19597561 | Msa1013220:intron | 40.0% | |
| TGTATATGAGCTTCTAGTGG+TGG | - | chr7_1:19597664-19597683 | None:intergenic | 40.0% | |
| GCATGTATATGAGCTTCTAG+TGG | - | chr7_1:19597667-19597686 | None:intergenic | 40.0% | |
| TAGAGTGGTGTAGAAACATG+AGG | + | chr7_1:19597789-19597808 | Msa1013220:intron | 40.0% | |
| GACATTACAAGAGCTAAAGC+TGG | + | chr7_1:19601214-19601233 | Msa1013220:intron | 40.0% | |
| AGTCACAACTGAATCAACTG+CGG | - | chr7_1:19601267-19601286 | None:intergenic | 40.0% | |
| GACTCCAACTAGCAAATCTT+TGG | + | chr7_1:19601283-19601302 | Msa1013220:CDS | 40.0% | |
| !!! | TTTTGAGCTTGGTAACGACG+AGG | + | chr7_1:19594741-19594760 | Msa1013220:CDS | 45.0% |
| GACTCCAACTAGCAAACCTT+TGG | + | chr7_1:19594970-19594989 | Msa1013220:CDS | 45.0% | |
| ! | AAAGCCGTCTACTGATAGTG+TGG | + | chr7_1:19594994-19595013 | Msa1013220:intron | 45.0% |
| ! | CCGGTCACGATGATTGTTTT+TGG | - | chr7_1:19595083-19595102 | None:intergenic | 45.0% |
| CGAACTAGATCATTCTAGCC+CGG | + | chr7_1:19595107-19595126 | Msa1013220:intron | 45.0% | |
| !!! | ATTTTAGGATTGGTGCCGAG+CGG | - | chr7_1:19595596-19595615 | None:intergenic | 45.0% |
| GCTACGGAGCAATGTTTCAT+GGG | - | chr7_1:19595842-19595861 | None:intergenic | 45.0% | |
| AGCTACGGAGCAATGTTTCA+TGG | - | chr7_1:19595843-19595862 | None:intergenic | 45.0% | |
| TACTATGAGCCGTACCTCAT+AGG | + | chr7_1:19596036-19596055 | Msa1013220:intron | 45.0% | |
| TACTATGACCCGTACGTCAT+AGG | + | chr7_1:19596089-19596108 | Msa1013220:intron | 45.0% | |
| TACTATGACCCGTACGTCAT+AGG | + | chr7_1:19596089-19596108 | Msa1013220:intron | 45.0% | |
| TACTATGACCCGTACGTCAT+AGG | + | chr7_1:19596089-19596108 | Msa1013220:intron | 45.0% | |
| ! | TTCGGTTCAGTATTGAGGTC+TGG | - | chr7_1:19596932-19596951 | None:intergenic | 45.0% |
| ! | GTGTCTCTTGCTGTGTAACT+TGG | - | chr7_1:19597216-19597235 | None:intergenic | 45.0% |
| ! | GGGGTGGATTTGAGAGTAAT+GGG | + | chr7_1:19597602-19597621 | Msa1013220:intron | 45.0% |
| ! | GGGTGGATTTGAGAGTAATG+GGG | + | chr7_1:19597603-19597622 | Msa1013220:intron | 45.0% |
| TTCTCCTTCCCTCTCAAGTT+CGG | - | chr7_1:19597756-19597775 | None:intergenic | 45.0% | |
| !! | GACAAAGTTGGTATCAGAGC+AGG | - | chr7_1:19598201-19598220 | None:intergenic | 45.0% |
| ! | CCGGTCACGATGATTGTTTT+TGG | - | chr7_1:19595083-19595102 | None:intergenic | 45.0% |
| CGAACTAGATCATTCTAGCC+CGG | + | chr7_1:19595107-19595126 | Msa1013220:intron | 45.0% | |
| !!! | ATTTTAGGATTGGTGCCGAG+CGG | - | chr7_1:19595596-19595615 | None:intergenic | 45.0% |
| GCTACGGAGCAATGTTTCAT+GGG | - | chr7_1:19595842-19595861 | None:intergenic | 45.0% | |
| AGCTACGGAGCAATGTTTCA+TGG | - | chr7_1:19595843-19595862 | None:intergenic | 45.0% | |
| TACTATGAGCCGTACCTCAT+AGG | + | chr7_1:19596036-19596055 | Msa1013220:intron | 45.0% | |
| TACTATGACCCGTACGTCAT+AGG | + | chr7_1:19596089-19596108 | Msa1013220:intron | 45.0% | |
| TACTATGACCCGTACGTCAT+AGG | + | chr7_1:19596089-19596108 | Msa1013220:intron | 45.0% | |
| TACTATGACCCGTACGTCAT+AGG | + | chr7_1:19596089-19596108 | Msa1013220:intron | 45.0% | |
| ! | TTCGGTTCAGTATTGAGGTC+TGG | - | chr7_1:19596932-19596951 | None:intergenic | 45.0% |
| ! | GTGTCTCTTGCTGTGTAACT+TGG | - | chr7_1:19597216-19597235 | None:intergenic | 45.0% |
| ! | GGGGTGGATTTGAGAGTAAT+GGG | + | chr7_1:19597602-19597621 | Msa1013220:intron | 45.0% |
| ! | GGGTGGATTTGAGAGTAATG+GGG | + | chr7_1:19597603-19597622 | Msa1013220:intron | 45.0% |
| TTCTCCTTCCCTCTCAAGTT+CGG | - | chr7_1:19597756-19597775 | None:intergenic | 45.0% | |
| TGCGGCAACATCATCTTTGT+TGG | - | chr7_1:19601249-19601268 | None:intergenic | 45.0% | |
| ! | CGAAGTTGCTGCTGCTGATT+CGG | + | chr7_1:19594943-19594962 | Msa1013220:CDS | 50.0% |
| TCAGTAGACGGCTTTCCCAA+AGG | - | chr7_1:19594989-19595008 | None:intergenic | 50.0% | |
| ! | GAATGATCTAGTTCGTGCGC+CGG | - | chr7_1:19595102-19595121 | None:intergenic | 50.0% |
| CTCTGATGCTATAGGGAGGA+AGG | - | chr7_1:19595562-19595581 | None:intergenic | 50.0% | |
| CTTCCTCCCTATAGCATCAG+AGG | + | chr7_1:19595560-19595579 | Msa1013220:intron | 50.0% | |
| CTTCCTCTGATGCTATAGGG+AGG | - | chr7_1:19595566-19595585 | None:intergenic | 50.0% | |
| !! | TACTTACGGGTTCTGGGACA+GGG | - | chr7_1:19597063-19597082 | None:intergenic | 50.0% |
| !! | ATACTTACGGGTTCTGGGAC+AGG | - | chr7_1:19597064-19597083 | None:intergenic | 50.0% |
| TGAAAATCATGAGGAGGGGG+TGG | + | chr7_1:19597586-19597605 | Msa1013220:intron | 50.0% | |
| ! | GGGGGTGGATTTGAGAGTAA+TGG | + | chr7_1:19597601-19597620 | Msa1013220:intron | 50.0% |
| ! | GAGGGTTATGGTGGTGAATG+TGG | + | chr7_1:19597727-19597746 | Msa1013220:intron | 50.0% |
| ATGTGGAGACCGAACTTGAG+AGG | + | chr7_1:19597744-19597763 | Msa1013220:intron | 50.0% | |
| TGTGGAGACCGAACTTGAGA+GGG | + | chr7_1:19597745-19597764 | Msa1013220:intron | 50.0% | |
| CAGATCGTGCCTTGGGTTAA+TGG | - | chr7_1:19598172-19598191 | None:intergenic | 50.0% | |
| ! | GTCGATTCAGATCGTGCCTT+GGG | - | chr7_1:19598179-19598198 | None:intergenic | 50.0% |
| ! | GAATGATCTAGTTCGTGCGC+CGG | - | chr7_1:19595102-19595121 | None:intergenic | 50.0% |
| !! | TACTTACGGGTTCTGGGACA+GGG | - | chr7_1:19597063-19597082 | None:intergenic | 50.0% |
| !! | ATACTTACGGGTTCTGGGAC+AGG | - | chr7_1:19597064-19597083 | None:intergenic | 50.0% |
| TGAAAATCATGAGGAGGGGG+TGG | + | chr7_1:19597586-19597605 | Msa1013220:intron | 50.0% | |
| ! | GGGGGTGGATTTGAGAGTAA+TGG | + | chr7_1:19597601-19597620 | Msa1013220:intron | 50.0% |
| ! | GAGGGTTATGGTGGTGAATG+TGG | + | chr7_1:19597727-19597746 | Msa1013220:intron | 50.0% |
| ATGTGGAGACCGAACTTGAG+AGG | + | chr7_1:19597744-19597763 | Msa1013220:intron | 50.0% | |
| TGTGGAGACCGAACTTGAGA+GGG | + | chr7_1:19597745-19597764 | Msa1013220:intron | 50.0% | |
| AGAGGAAGCAATGCTCCGCT+CGG | + | chr7_1:19595578-19595597 | Msa1013220:intron | 55.0% | |
| CTGCATCTTTCCGCTATGCG+AGG | + | chr7_1:19596821-19596840 | Msa1013220:intron | 55.0% | |
| GAGCATGAAGCCTCGCATAG+CGG | - | chr7_1:19596834-19596853 | None:intergenic | 55.0% | |
| GAGACCGAACTTGAGAGGGA+AGG | + | chr7_1:19597749-19597768 | Msa1013220:intron | 55.0% | |
| ! | GGTCGATTCAGATCGTGCCT+TGG | - | chr7_1:19598180-19598199 | None:intergenic | 55.0% |
| AGAGGAAGCAATGCTCCGCT+CGG | + | chr7_1:19595578-19595597 | Msa1013220:intron | 55.0% | |
| CTGCATCTTTCCGCTATGCG+AGG | + | chr7_1:19596821-19596840 | Msa1013220:intron | 55.0% | |
| GAGCATGAAGCCTCGCATAG+CGG | - | chr7_1:19596834-19596853 | None:intergenic | 55.0% | |
| GAGACCGAACTTGAGAGGGA+AGG | + | chr7_1:19597749-19597768 | Msa1013220:intron | 55.0% | |
| TGCGAGGCTTCATGCTCGCT+CGG | + | chr7_1:19596837-19596856 | Msa1013220:intron | 60.0% | |
| TGCGAGGCTTCATGCTCGCT+CGG | + | chr7_1:19596837-19596856 | Msa1013220:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 19594721 | 19601376 | 19594721 | ID=Msa1013220;Name=Msa1013220 |
| chr7_1 | mRNA | 19594721 | 19601376 | 19594721 | ID=Msa1013220-mRNA-1;Parent=Msa1013220;Name=Msa1013220-mRNA-1;_AED=0.46;_eAED=0.81;_QI=0|0|0|1|1|1|3|0|98 |
| chr7_1 | exon | 19594721 | 19594816 | 19594721 | ID=Msa1013220-mRNA-1:exon:4776;Parent=Msa1013220-mRNA-1 |
| chr7_1 | exon | 19594908 | 19595010 | 19594908 | ID=Msa1013220-mRNA-1:exon:4777;Parent=Msa1013220-mRNA-1 |
| chr7_1 | exon | 19601279 | 19601376 | 19601279 | ID=Msa1013220-mRNA-1:exon:4778;Parent=Msa1013220-mRNA-1 |
| chr7_1 | CDS | 19594721 | 19594816 | 19594721 | ID=Msa1013220-mRNA-1:cds;Parent=Msa1013220-mRNA-1 |
| chr7_1 | CDS | 19594908 | 19595010 | 19594908 | ID=Msa1013220-mRNA-1:cds;Parent=Msa1013220-mRNA-1 |
| chr7_1 | CDS | 19601279 | 19601376 | 19601279 | ID=Msa1013220-mRNA-1:cds;Parent=Msa1013220-mRNA-1 |
| Gene Sequence |
| Protein sequence |
