AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1024360

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1024360 MtrunA17_Chr7g0236201 95.122 205 10 0 45 249 84 288 3.07e-136 402
Msa1024360 MtrunA17_Chr7g0236161 95.122 205 10 0 45 249 84 288 3.24e-136 401
Msa1024360 MtrunA17_Chr7g0236121 95.122 205 10 0 45 249 84 288 5.05e-136 402
Msa1024360 MtrunA17_Chr4g0055021 52.239 201 93 3 50 248 87 286 9.18e-71 223
Msa1024360 MtrunA17_Chr7g0236651 55.500 200 87 2 50 248 85 283 6.93e-70 229
Msa1024360 MtrunA17_Chr7g0236641 53.769 199 90 2 50 247 87 284 7.23e-69 227
Msa1024360 MtrunA17_Chr7g0236511 55.276 199 87 2 50 247 93 290 3.57e-68 224
Msa1024360 MtrunA17_Chr7g0236521 52.133 211 95 3 38 247 59 264 3.90e-66 211
Msa1024360 MtrunA17_Chr7g0236561 52.830 212 94 3 38 248 59 265 5.00e-66 219
Msa1024360 MtrunA17_Chr7g0236551 54.774 199 88 2 50 247 87 284 5.84e-66 218
Msa1024360 MtrunA17_Chr7g0236341 50.943 212 98 3 38 248 79 285 1.97e-61 206
Msa1024360 MtrunA17_Chr7g0236691 52.358 212 95 3 38 248 79 285 1.40e-58 198
Msa1024360 MtrunA17_Chr2g0280841 54.601 163 69 2 48 205 89 251 1.55e-56 186
Msa1024360 MtrunA17_Chr2g0280791 52.660 188 77 4 48 226 83 267 4.45e-56 192
Msa1024360 MtrunA17_Chr7g0236231 49.490 196 91 3 50 244 97 285 3.17e-53 184
Msa1024360 MtrunA17_Chr7g0236591 52.841 176 75 4 38 210 106 276 1.13e-52 172
Msa1024360 MtrunA17_Chr2g0280801 58.451 142 55 1 48 185 88 229 2.61e-48 170
Msa1024360 MtrunA17_Chr2g0280771 55.319 141 59 1 48 184 80 220 6.10e-43 154
Msa1024360 MtrunA17_Chr2g0280781 45.128 195 96 4 48 233 79 271 2.23e-42 153
Msa1024360 MtrunA17_Chr8g0340071 39.706 204 122 1 45 248 84 286 2.45e-41 150
Msa1024360 MtrunA17_Chr8g0340081 40.686 204 120 1 45 248 86 288 4.05e-41 150
Msa1024360 MtrunA17_Chr7g0236571 54.198 131 57 3 121 249 9 138 3.71e-39 143
Msa1024360 MtrunA17_Chr8g0340061 42.857 182 103 1 45 226 84 264 4.54e-39 141
Msa1024360 MtrunA17_Chr7g0236471 49.231 130 64 2 121 248 1 130 5.63e-35 132
Msa1024360 MtrunA17_Chr8g0340111 43.478 161 88 2 45 203 85 244 2.40e-33 127
Msa1024360 MtrunA17_Chr4g0048581 32.990 194 126 3 52 242 95 287 3.81e-32 124
Msa1024360 MtrunA17_Chr2g0280691 35.149 202 123 5 50 246 87 285 2.30e-29 116
Msa1024360 MtrunA17_Chr4g0048741 32.850 207 122 4 50 245 103 303 5.51e-29 115
Msa1024360 MtrunA17_Chr7g0236411 54.651 86 39 0 152 237 25 110 6.74e-29 105
Msa1024360 MtrunA17_Chr3g0084621 32.995 197 125 4 50 242 91 284 1.38e-28 113
Msa1024360 MtrunA17_Chr3g0084451 39.456 147 84 2 38 184 83 224 2.83e-28 113
Msa1024360 MtrunA17_Chr3g0084491 32.367 207 131 5 38 242 96 295 3.49e-28 112
Msa1024360 MtrunA17_Chr4g0023071 32.487 197 125 5 55 245 93 287 6.43e-28 112
Msa1024360 MtrunA17_Chr3g0084441 33.488 215 129 6 38 245 83 290 8.90e-28 111
Msa1024360 MtrunA17_Chr3g0084411 33.333 207 127 6 38 240 80 279 2.38e-27 110
Msa1024360 MtrunA17_Chr4g0048641 31.863 204 128 4 50 245 110 310 2.64e-27 110
Msa1024360 MtrunA17_Chr4g0048721 32.663 199 124 4 50 240 92 288 3.78e-27 108
Msa1024360 MtrunA17_Chr3g0084421 32.547 212 132 6 38 245 42 246 5.08e-27 109
Msa1024360 MtrunA17_Chr4g0048691 29.412 204 134 3 50 245 108 309 6.89e-27 108
Msa1024360 MtrunA17_Chr4g0048631 38.994 159 83 5 38 187 80 233 1.23e-26 108
Msa1024360 MtrunA17_Chr3g0084681 33.831 201 126 5 50 246 91 288 1.35e-26 108
Msa1024360 MtrunA17_Chr8g0361261 41.176 136 76 3 52 185 120 253 3.58e-26 107
Msa1024360 MtrunA17_Chr2g0280751 34.010 197 115 7 52 240 99 288 4.94e-26 106
Msa1024360 MtrunA17_Chr3g0084691 31.884 207 132 5 38 242 83 282 6.25e-26 106
Msa1024360 MtrunA17_Chr2g0323301 34.826 201 119 8 51 244 91 286 9.14e-26 105
Msa1024360 MtrunA17_Chr3g0084431 40.523 153 80 4 38 184 83 230 1.14e-25 105
Msa1024360 MtrunA17_Chr8g0361301 41.176 136 76 3 52 185 89 222 1.49e-25 105
Msa1024360 MtrunA17_Chr4g0048761 32.547 212 116 4 50 245 103 303 1.66e-25 104
Msa1024360 MtrunA17_Chr4g0048651 31.019 216 133 6 38 244 100 308 1.84e-25 104
Msa1024360 MtrunA17_Chr2g0318831 36.364 154 92 3 38 190 80 228 3.23e-25 103
Msa1024360 MtrunA17_Chr8g0340091 42.636 129 73 1 45 173 137 264 4.23e-25 103
Msa1024360 MtrunA17_Chr2g0280681 33.333 192 121 4 58 245 97 285 5.63e-25 103
Msa1024360 MtrunA17_Chr8g0361441 40.288 139 78 2 50 185 90 226 7.79e-25 103
Msa1024360 MtrunA17_Chr3g0098791 39.189 148 81 3 38 181 85 227 1.33e-24 102
Msa1024360 MtrunA17_Chr4g0042351 36.806 144 89 1 44 187 81 222 2.16e-24 101
Msa1024360 MtrunA17_Chr4g0042421 33.014 209 131 6 38 242 77 280 4.82e-24 100
Msa1024360 MtrunA17_Chr4g0048801 33.333 177 110 5 73 244 112 285 4.87e-24 100
Msa1024360 MtrunA17_Chr2g0280731 33.673 196 116 7 52 240 95 283 1.30e-23 99.4
Msa1024360 MtrunA17_Chr3g0084651 32.857 210 127 6 38 240 80 282 1.77e-23 98.2
Msa1024360 MtrunA17_Chr2g0318811 34.416 154 95 3 38 190 77 225 3.34e-23 98.2
Msa1024360 MtrunA17_Chr4g0020081 31.658 199 121 7 52 242 90 281 4.34e-23 97.8
Msa1024360 MtrunA17_Chr2g0280711 38.028 142 79 4 54 187 93 233 1.05e-22 97.1
Msa1024360 MtrunA17_Chr8g0361311 40.580 138 77 4 51 185 87 222 2.29e-22 95.1
Msa1024360 MtrunA17_Chr4g0042441 33.838 198 122 5 50 242 88 281 9.41e-22 94.0
Msa1024360 MtrunA17_Chr8g0361251 32.227 211 117 6 51 248 87 284 9.95e-22 94.0
Msa1024360 MtrunA17_Chr4g0042361 35.338 133 84 1 52 184 123 253 1.78e-21 93.2
Msa1024360 MtrunA17_Chr4g0042401 32.701 211 127 7 38 242 79 280 1.96e-21 93.2
Msa1024360 MtrunA17_Chr2g0318841 29.665 209 138 5 38 244 77 278 2.19e-21 93.2
Msa1024360 MtrunA17_Chr4g0042381 34.266 143 91 2 44 185 80 220 7.25e-21 91.7
Msa1024360 MtrunA17_Chr4g0042391 32.051 156 99 1 39 187 67 222 1.89e-20 90.1
Msa1024360 MtrunA17_Chr2g0280701 40.441 136 76 3 50 181 85 219 5.66e-20 89.0
Msa1024360 MtrunA17_Chr4g0048791 29.193 161 110 2 82 240 139 297 7.29e-19 85.5
Msa1024360 MtrunA17_Chr4g0042341 34.532 139 81 3 52 184 88 222 1.42e-18 84.7
Msa1024360 MtrunA17_Chr8g0361431 37.705 122 74 2 56 176 105 225 3.02e-18 84.0
Msa1024360 MtrunA17_Chr5g0428101 35.664 143 84 3 38 177 83 220 6.40e-18 82.8
Msa1024360 MtrunA17_Chr3g0093161 30.049 203 134 4 50 250 84 280 7.38e-18 82.8
Msa1024360 MtrunA17_Chr3g0078551 28.079 203 135 4 50 242 92 293 1.54e-17 81.6
Msa1024360 MtrunA17_Chr5g0422921 37.594 133 77 3 51 178 82 213 3.13e-17 80.9
Msa1024360 MtrunA17_Chr2g0323341 30.935 139 92 3 109 245 62 198 1.05e-15 76.3
Msa1024360 MtrunA17_Chr3g0078541 31.034 145 91 2 50 185 101 245 2.33e-15 75.5
Msa1024360 MtrunA17_Chr2g0323241 36.290 124 68 5 50 171 93 207 4.87e-15 73.9
Msa1024360 MtrunA17_Chr3g0078521 26.733 202 136 4 50 240 90 290 2.35e-14 72.4
Msa1024360 MtrunA17_Chr8g0361151 34.579 107 70 0 48 154 93 199 3.88e-14 71.2
Msa1024360 MtrunA17_Chr1g0191111 31.677 161 96 5 51 207 109 259 3.99e-14 70.1
Msa1024360 MtrunA17_Chr5g0428111 34.127 126 79 2 56 178 98 222 5.10e-14 71.2
Msa1024360 MtrunA17_Chr8g0361281 35.252 139 83 3 51 183 85 222 7.22e-14 70.9
Msa1024360 MtrunA17_Chr8g0357931 29.825 171 115 3 41 207 82 251 8.57e-14 70.5
Msa1024360 MtrunA17_Chr8g0360201 40.000 80 48 0 75 154 8 87 1.23e-13 70.1
Msa1024360 MtrunA17_Chr8g0358031 31.677 161 96 5 51 207 102 252 2.01e-12 66.6
Msa1024360 MtrunA17_Chr8g0358071 30.201 149 98 4 41 185 83 229 2.40e-12 66.2
Msa1024360 MtrunA17_Chr8g0357691 35.780 109 67 2 68 174 116 223 2.40e-12 66.2
Msa1024360 MtrunA17_Chr8g0361141 34.211 114 68 3 46 154 90 201 4.78e-12 65.5
Msa1024360 MtrunA17_Chr8g0357801 26.316 190 133 4 22 207 65 251 5.75e-12 65.1
Msa1024360 MtrunA17_Chr3g0078531 25.248 202 139 4 50 240 102 302 7.77e-12 65.1
Msa1024360 MtrunA17_Chr8g0357881 30.247 162 98 6 51 207 107 258 6.20e-11 62.0
Msa1024360 MtrunA17_Chr8g0358151 29.193 161 101 5 51 207 96 247 9.41e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1024360 AT1G11350.1 43.284 201 103 8 50 244 84 279 2.51e-39 145
Msa1024360 AT4G21390.1 40.201 199 108 6 51 240 92 288 1.28e-36 137
Msa1024360 AT4G21390.2 40.201 199 108 6 51 240 92 288 1.86e-36 137
Msa1024360 AT1G11300.2 39.000 200 112 6 50 242 89 285 3.78e-35 133
Msa1024360 AT1G11300.1 39.000 200 112 6 50 242 89 285 4.46e-35 133
Msa1024360 AT1G11330.3 36.548 197 118 7 50 242 96 289 5.93e-35 132
Msa1024360 AT1G11330.1 36.548 197 118 7 50 242 96 289 6.64e-35 132
Msa1024360 AT1G11330.2 36.548 197 118 7 50 242 96 289 7.61e-35 132
Msa1024360 AT1G61610.2 34.184 196 123 4 52 242 93 287 1.52e-32 125
Msa1024360 AT1G61610.1 34.184 196 123 4 52 242 93 287 1.61e-32 125
Msa1024360 AT1G11303.1 37.500 200 115 7 50 242 89 285 4.29e-32 124
Msa1024360 AT1G61420.1 36.612 183 114 2 50 232 85 265 7.18e-30 118
Msa1024360 AT1G61420.2 36.612 183 114 2 50 232 85 265 9.04e-30 117
Msa1024360 AT1G61420.4 36.612 183 114 2 50 232 85 265 9.04e-30 117
Msa1024360 AT1G61400.1 40.373 161 93 2 50 208 95 254 3.88e-29 115
Msa1024360 AT1G61400.2 40.373 161 93 2 50 208 95 254 4.49e-29 115
Msa1024360 AT1G61490.4 35.897 195 121 3 50 244 85 275 4.96e-29 115
Msa1024360 AT1G61490.1 35.897 195 121 3 50 244 85 275 4.96e-29 115
Msa1024360 AT1G61490.2 35.897 195 121 3 50 244 85 275 4.96e-29 115
Msa1024360 AT1G61490.5 35.897 195 121 3 50 244 85 275 4.96e-29 115
Msa1024360 AT1G11280.4 35.795 176 106 3 54 226 103 274 3.34e-28 113
Msa1024360 AT1G11280.3 35.795 176 106 3 54 226 93 264 3.59e-28 113
Msa1024360 AT1G61440.3 37.037 162 99 2 50 209 78 238 3.79e-28 113
Msa1024360 AT1G11280.2 35.795 176 106 3 54 226 93 264 3.93e-28 113
Msa1024360 AT1G11280.1 35.795 176 106 3 54 226 103 274 3.95e-28 113
Msa1024360 AT1G11280.5 35.795 176 106 3 54 226 93 264 4.15e-28 112
Msa1024360 AT1G61440.1 37.037 162 99 2 50 209 78 238 4.24e-28 112
Msa1024360 AT1G61440.2 37.037 162 99 2 50 209 78 238 4.54e-28 112
Msa1024360 AT1G11410.1 29.767 215 141 5 38 248 76 284 9.38e-28 112
Msa1024360 AT1G11410.3 29.767 215 141 5 38 248 52 260 1.13e-27 111
Msa1024360 AT1G11410.4 29.767 215 141 5 38 248 83 291 1.13e-27 111
Msa1024360 AT1G61550.1 36.571 175 107 3 54 227 84 255 1.64e-27 111
Msa1024360 AT1G61390.1 32.990 194 126 3 54 246 107 297 2.02e-27 110
Msa1024360 AT1G61490.6 39.610 154 92 1 50 203 85 237 2.52e-27 110
Msa1024360 AT1G61490.7 39.610 154 92 1 50 203 85 237 2.52e-27 110
Msa1024360 AT4G21380.1 35.323 201 120 5 50 244 93 289 2.71e-27 110
Msa1024360 AT4G21380.2 35.323 201 120 5 50 244 93 289 3.20e-27 110
Msa1024360 AT3G12000.1 31.156 199 129 5 50 242 100 296 3.41e-27 108
Msa1024360 AT1G61380.1 34.021 194 124 3 50 242 82 272 4.97e-27 109
Msa1024360 AT1G61500.2 37.931 145 88 1 67 209 84 228 1.79e-26 108
Msa1024360 AT1G61500.1 37.931 145 88 1 67 209 102 246 2.20e-26 107
Msa1024360 AT1G61480.1 32.338 201 128 4 50 248 85 279 2.27e-26 107
Msa1024360 AT1G61500.3 37.931 145 88 1 67 209 107 251 2.34e-26 107
Msa1024360 AT1G61360.2 35.028 177 109 3 54 227 4 177 5.01e-26 107
Msa1024360 AT1G61360.3 35.028 177 109 3 54 227 4 177 5.01e-26 107
Msa1024360 AT1G61360.4 35.028 177 109 3 54 227 4 177 5.01e-26 107
Msa1024360 AT1G61360.1 35.028 177 109 3 54 227 85 258 6.70e-26 106
Msa1024360 AT1G11340.2 30.806 211 138 4 38 245 141 346 2.09e-25 105
Msa1024360 AT1G11340.1 30.806 211 138 4 38 245 73 278 2.18e-25 105
Msa1024360 AT1G11340.3 30.806 211 138 4 38 245 141 346 2.30e-25 105
Msa1024360 AT1G61430.11 35.028 177 112 2 50 226 62 235 4.17e-24 101
Msa1024360 AT1G61430.12 35.028 177 112 2 50 226 62 235 4.17e-24 101
Msa1024360 AT1G61430.13 35.028 177 112 2 50 226 62 235 4.17e-24 101
Msa1024360 AT1G61430.4 35.028 177 112 2 50 226 62 235 4.87e-24 100
Msa1024360 AT1G61430.1 35.028 177 112 2 50 226 85 258 4.96e-24 101
Msa1024360 AT1G61430.10 35.028 177 112 2 50 226 62 235 5.16e-24 100
Msa1024360 AT1G61430.3 35.028 177 112 2 50 226 94 267 5.38e-24 100
Msa1024360 AT1G61430.9 35.028 177 112 2 50 226 85 258 5.45e-24 100
Msa1024360 AT1G61430.8 35.028 177 112 2 50 226 85 258 5.69e-24 100
Msa1024360 AT1G61430.7 35.028 177 112 2 50 226 85 258 5.69e-24 100
Msa1024360 AT1G61430.5 35.028 177 112 2 50 226 85 258 5.92e-24 100
Msa1024360 AT1G61430.2 35.028 177 112 2 50 226 85 258 6.80e-24 100
Msa1024360 AT1G61430.6 35.028 177 112 2 50 226 85 258 6.80e-24 100
Msa1024360 AT2G19130.1 33.962 212 110 10 51 245 86 284 1.20e-23 100
Msa1024360 AT1G61370.1 33.121 157 101 2 54 207 90 245 1.34e-23 99.8
Msa1024360 AT1G11410.2 30.675 163 110 2 87 248 9 169 1.45e-23 99.8
Msa1024360 AT1G65790.1 33.500 200 125 6 50 246 91 285 2.11e-23 99.4
Msa1024360 AT1G65790.3 33.500 200 125 6 50 246 91 285 2.19e-23 99.0
Msa1024360 AT1G65790.2 33.500 200 125 6 50 246 91 285 2.19e-23 99.0
Msa1024360 AT1G61460.1 35.135 148 95 1 50 197 86 232 5.87e-23 97.8
Msa1024360 AT1G65800.1 31.863 204 128 6 50 246 91 290 6.61e-22 95.1
Msa1024360 AT1G65800.2 31.527 203 130 5 50 246 91 290 6.64e-22 94.7
Msa1024360 AT4G27290.1 36.170 141 83 3 51 185 87 226 2.98e-21 93.2
Msa1024360 AT4G27290.2 36.170 141 83 3 51 185 87 226 3.09e-21 92.8
Msa1024360 AT4G00340.2 29.412 187 118 5 63 244 94 271 2.12e-19 87.4
Msa1024360 AT4G00340.1 29.412 187 118 5 63 244 94 271 2.17e-19 87.4
Msa1024360 AT4G03230.8 33.108 148 84 7 51 192 94 232 2.88e-17 81.3
Msa1024360 AT4G03230.4 33.108 148 84 7 51 192 94 232 3.76e-17 81.3
Msa1024360 AT4G03230.1 33.108 148 84 7 51 192 94 232 3.76e-17 81.3
Msa1024360 AT3G16030.7 33.898 177 88 7 58 213 104 272 5.66e-16 77.4
Msa1024360 AT3G16030.4 33.898 177 88 7 58 213 104 272 5.97e-16 77.4
Msa1024360 AT3G16030.3 33.898 177 88 7 58 213 104 272 6.03e-16 77.4
Msa1024360 AT3G16030.8 33.898 177 88 7 58 213 104 272 6.03e-16 77.4
Msa1024360 AT3G16030.5 33.898 177 88 7 58 213 104 272 6.03e-16 77.4
Msa1024360 AT4G03230.5 32.624 141 80 7 58 192 29 160 6.92e-16 77.4
Msa1024360 AT4G27300.1 35.172 145 85 4 50 187 88 230 8.00e-16 77.0
Msa1024360 AT3G16030.1 33.898 177 88 7 58 213 93 261 8.39e-16 77.0
Msa1024360 AT3G16030.6 33.898 177 88 7 58 213 104 272 8.85e-16 77.0
Msa1024360 AT5G18470.1 34.109 129 76 3 50 174 107 230 2.30e-14 72.4
Msa1024360 AT1G61420.3 36.207 116 73 1 117 232 1 115 7.04e-14 71.2
Msa1024360 AT1G61420.5 36.207 116 73 1 117 232 1 115 7.05e-14 71.2
Msa1024360 AT1G61490.3 35.156 128 80 2 117 244 1 125 2.63e-13 69.7
Msa1024360 AT4G11900.8 32.787 122 72 5 71 187 71 187 1.11e-12 67.8
Msa1024360 AT4G11900.7 32.787 122 72 5 71 187 140 256 1.27e-12 67.8
Msa1024360 AT4G11900.2 32.787 122 72 5 71 187 140 256 1.34e-12 67.4
Msa1024360 AT4G11900.3 32.787 122 72 5 71 187 140 256 1.34e-12 67.4
Msa1024360 AT4G11900.9 32.787 122 72 5 71 187 71 187 1.34e-12 67.4
Msa1024360 AT4G11900.6 33.333 120 70 5 71 185 140 254 1.49e-12 67.4
Msa1024360 AT4G11900.4 33.333 120 70 5 71 185 140 254 1.49e-12 67.4
Msa1024360 AT4G11900.10 33.333 120 70 5 71 185 140 254 1.54e-12 67.4
Msa1024360 AT4G11900.5 33.333 120 70 5 71 185 140 254 1.54e-12 67.4
Msa1024360 AT4G11900.1 33.333 120 70 5 71 185 140 254 1.77e-12 67.4
Msa1024360 AT1G61390.2 32.061 131 86 2 117 246 1 129 4.47e-12 65.9
Msa1024360 AT1G67520.1 33.077 130 80 4 58 182 98 225 1.41e-11 64.3
Msa1024360 AT1G67520.2 33.077 130 80 4 58 182 98 225 1.58e-11 64.3
Msa1024360 AT1G67520.3 33.077 130 80 4 58 182 98 225 2.14e-11 63.9
Msa1024360 AT1G67520.6 33.077 130 80 4 58 182 105 232 2.27e-11 63.9
Msa1024360 AT1G67520.4 33.077 130 80 4 58 182 98 225 2.36e-11 63.9
Msa1024360 AT3G16030.2 33.333 132 64 5 99 213 4 128 3.46e-11 63.2
Msa1024360 AT1G61380.2 33.858 127 81 2 117 242 1 125 5.80e-11 62.8

Find 51 sgRNAs with CRISPR-Local

Find 168 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGGAAAGAAAGAGGTGATT+TGG 0.310562 7_1:+53576915 Msa1024360:CDS
GCACAACAGAAAGAACTATA+TGG 0.319207 7_1:+53577014 Msa1024360:CDS
TAAAAGTTTCGAACTTGAAT+TGG 0.321703 7_1:-53576963 None:intergenic
AGATAATGAGTTGTCATATA+TGG 0.356213 7_1:-53577268 None:intergenic
TCATTCCATATGAACACTTC+AGG 0.364500 7_1:-53577190 None:intergenic
TCTGTGAATATGACCGGTCT+TGG 0.382940 7_1:-53576171 None:intergenic
CTTGAATTGGTTGCAACATT+CGG 0.397503 7_1:-53576950 None:intergenic
GTCAAGATGCGAGTACTGTT+TGG 0.399113 7_1:-53576101 None:intergenic
TTGCTTGTAAGTTTCATGTT+TGG 0.400776 7_1:-53577070 None:intergenic
CTATACCTGAAGTGTTCATA+TGG 0.404879 7_1:+53577185 Msa1024360:CDS
CTTACAAGCAACAAAATAAC+AGG 0.405748 7_1:+53577082 Msa1024360:CDS
TACTCGCATCTTGACTGAAA+TGG 0.413605 7_1:+53576109 Msa1024360:CDS
ACTCAACCGTATTGGCGAAC+TGG 0.423741 7_1:+53577214 Msa1024360:CDS
TTTGGCAACATTACGTTTGA+AGG 0.425598 7_1:-53577052 None:intergenic
GGTTTACATGTTGGAGATGA+TGG 0.444694 7_1:+53577295 Msa1024360:CDS
GGGAACCTTGTACTACTTGA+AGG 0.452115 7_1:+53576992 Msa1024360:CDS
AACATGGAATAGTCATGAAA+TGG 0.453983 7_1:+53577441 Msa1024360:CDS
CTTCCAATGGATGGATCAAA+AGG 0.469691 7_1:-53577136 None:intergenic
ACATTACGTTTGAAGGATGC+TGG 0.469740 7_1:-53577045 None:intergenic
CACGGACCAGTTCGCCAATA+CGG 0.474635 7_1:-53577220 None:intergenic
AATGATCTTGTGGTATTGAA+TGG 0.483224 7_1:+53576896 Msa1024360:CDS
AAGGAAACTGTGAAGAGAAA+TGG 0.486215 7_1:+53577389 Msa1024360:CDS
TATCTCGGTGGTTTACATGT+TGG 0.490266 7_1:+53577286 Msa1024360:CDS
GTTGTTAAAATATCTGATAA+TGG 0.494516 7_1:+53576872 Msa1024360:CDS
GGAATGAAACTCAACCGTAT+TGG 0.496818 7_1:+53577206 Msa1024360:CDS
GGGATGAAAAGAAGAATGAA+TGG 0.512451 7_1:+53577413 Msa1024360:CDS
AAAGAGAAGCTTCCAATGGA+TGG 0.513517 7_1:-53577145 None:intergenic
CACAACAGAAAGAACTATAT+GGG 0.518422 7_1:+53577015 Msa1024360:CDS
GCTTCTCTTTGAGTGTTGAA+AGG 0.522812 7_1:+53577158 Msa1024360:CDS
TGTGGACTGTGTTCCAAGAC+CGG 0.524110 7_1:+53576158 Msa1024360:CDS
ACCTTTCTTTAATCTTCGCA+TGG 0.534046 7_1:-53576075 None:intergenic
AGAAAGTAAAACTCACATCA+TGG 0.536196 7_1:+53577107 Msa1024360:CDS
TGGCGAACTGGTCCGTGGAA+TGG 0.536417 7_1:+53577226 Msa1024360:CDS
ATCTATAATCTAAGTTCAGA+AGG 0.540032 7_1:+53577370 Msa1024360:CDS
TTGTGCCTTCAAGTAGTACA+AGG 0.550916 7_1:-53576997 None:intergenic
GAAACTGTGAAGAGAAATGG+TGG 0.550984 7_1:+53577392 Msa1024360:CDS
CTTGACTGAAATGGATGTTG+TGG 0.551935 7_1:+53576118 Msa1024360:CDS
CATGTTGGAGATGATGGAGA+AGG 0.552716 7_1:+53577301 Msa1024360:CDS
GGTTGCAACATTCGGTGCGT+TGG 0.554193 7_1:-53576942 None:intergenic
ATAGTTTCTGTGAATATGAC+CGG 0.554667 7_1:-53576177 None:intergenic
TTCATTCTTTCAAATAACAT+CGG 0.572167 7_1:+53577330 Msa1024360:CDS
TATATGACAACTCATTATCT+CGG 0.580831 7_1:+53577271 Msa1024360:CDS
ACCATGCGAAGATTAAAGAA+AGG 0.597925 7_1:+53576074 None:intergenic
ATGGAATAGTCATGAAATGG+TGG 0.609758 7_1:+53577444 Msa1024360:CDS
ACTCAAAGAGAAGCTTCCAA+TGG 0.609942 7_1:-53577149 None:intergenic
AGAATGAATGGAAAGTAACA+TGG 0.610848 7_1:+53577425 Msa1024360:CDS
TGATAATGGTAATGATCTTG+TGG 0.621215 7_1:+53576886 Msa1024360:CDS
GGTATTGAATGGAAAGAAAG+AGG 0.631723 7_1:+53576907 Msa1024360:CDS
CGTATTGGCGAACTGGTCCG+TGG 0.635773 7_1:+53577221 Msa1024360:CDS
ATGACAACTCATTATCTCGG+TGG 0.661261 7_1:+53577274 Msa1024360:CDS
AAACTGTGAAGAGAAATGGT+GGG 0.768406 7_1:+53577393 Msa1024360:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATATTTATATACAATGT+AGG + chr7_1:53576431-53576450 Msa1024360:intron 10.0%
!!! GTTTAATTTTGTTTTTTTTA+CGG - chr7_1:53576537-53576556 None:intergenic 10.0%
!! AAAACAAAATTAAACTAAAA+TGG + chr7_1:53576542-53576561 Msa1024360:intron 10.0%
!! AAAATATTTATATACAATGT+AGG + chr7_1:53576431-53576450 Msa1024360:intron 10.0%
!!! GTTTAATTTTGTTTTTTTTA+CGG - chr7_1:53576537-53576556 None:intergenic 10.0%
!! AAAACAAAATTAAACTAAAA+TGG + chr7_1:53576542-53576561 Msa1024360:intron 10.0%
!!! TTAATTTTGTTTTTGAAAGA+AGG - chr7_1:53576510-53576529 None:intergenic 15.0%
!! TTTATTTATATATGGAACAA+GGG + chr7_1:53576604-53576623 Msa1024360:intron 15.0%
!!! TTAATTTTGTTTTTGAAAGA+AGG - chr7_1:53576510-53576529 None:intergenic 15.0%
!! TTTATTTATATATGGAACAA+GGG + chr7_1:53576604-53576623 Msa1024360:intron 15.0%
!! AAAATTAAACTAAAATGGCA+TGG + chr7_1:53576547-53576566 Msa1024360:intron 20.0%
!!! CTTTATTTATATATGGAACA+AGG + chr7_1:53576603-53576622 Msa1024360:intron 20.0%
!!! TTCATGTTTGTTAATTCAAT+TGG - chr7_1:53576659-53576678 None:intergenic 20.0%
!! GTTGTTAAAATATCTGATAA+TGG + chr7_1:53576872-53576891 Msa1024360:CDS 20.0%
!! TTCATTCTTTCAAATAACAT+CGG + chr7_1:53577330-53577349 Msa1024360:CDS 20.0%
!! AAAATTAAACTAAAATGGCA+TGG + chr7_1:53576547-53576566 Msa1024360:intron 20.0%
!!! CTTTATTTATATATGGAACA+AGG + chr7_1:53576603-53576622 Msa1024360:intron 20.0%
!!! TTCATGTTTGTTAATTCAAT+TGG - chr7_1:53576659-53576678 None:intergenic 20.0%
!! GTTGTTAAAATATCTGATAA+TGG + chr7_1:53576872-53576891 Msa1024360:CDS 20.0%
!! TTCATTCTTTCAAATAACAT+CGG + chr7_1:53577330-53577349 Msa1024360:CDS 20.0%
! TAACGAAGAAAATTAACTAC+TGG - chr7_1:53576217-53576236 None:intergenic 25.0%
!! TGCTGCTCTTTATTTATATA+TGG + chr7_1:53576596-53576615 Msa1024360:intron 25.0%
!! TGCAACAATAATTTTCAACT+AGG + chr7_1:53576823-53576842 Msa1024360:intron 25.0%
!! GCAACAATAATTTTCAACTA+GGG + chr7_1:53576824-53576843 Msa1024360:intron 25.0%
!! CAACAATAATTTTCAACTAG+GGG + chr7_1:53576825-53576844 Msa1024360:intron 25.0%
! TAAAAGTTTCGAACTTGAAT+TGG - chr7_1:53576966-53576985 None:intergenic 25.0%
! AGATAATGAGTTGTCATATA+TGG - chr7_1:53577271-53577290 None:intergenic 25.0%
! TATATGACAACTCATTATCT+CGG + chr7_1:53577271-53577290 Msa1024360:CDS 25.0%
! ATCTATAATCTAAGTTCAGA+AGG + chr7_1:53577370-53577389 Msa1024360:CDS 25.0%
! TAACGAAGAAAATTAACTAC+TGG - chr7_1:53576217-53576236 None:intergenic 25.0%
!! TGCTGCTCTTTATTTATATA+TGG + chr7_1:53576596-53576615 Msa1024360:intron 25.0%
!! TGCAACAATAATTTTCAACT+AGG + chr7_1:53576823-53576842 Msa1024360:intron 25.0%
!! GCAACAATAATTTTCAACTA+GGG + chr7_1:53576824-53576843 Msa1024360:intron 25.0%
!! CAACAATAATTTTCAACTAG+GGG + chr7_1:53576825-53576844 Msa1024360:intron 25.0%
! TAAAAGTTTCGAACTTGAAT+TGG - chr7_1:53576966-53576985 None:intergenic 25.0%
! AGATAATGAGTTGTCATATA+TGG - chr7_1:53577271-53577290 None:intergenic 25.0%
! TATATGACAACTCATTATCT+CGG + chr7_1:53577271-53577290 Msa1024360:CDS 25.0%
! ATCTATAATCTAAGTTCAGA+AGG + chr7_1:53577370-53577389 Msa1024360:CDS 25.0%
ATAGTTTCTGTGAATATGAC+CGG - chr7_1:53576180-53576199 None:intergenic 30.0%
TTATATATGGAACAAGGGTA+TGG + chr7_1:53576609-53576628 Msa1024360:intron 30.0%
AGTGAGCTCTACATTTAATT+TGG - chr7_1:53576706-53576725 None:intergenic 30.0%
! CAGACTTATCAATTTTCTTC+TGG + chr7_1:53576848-53576867 Msa1024360:CDS 30.0%
!! TGATAATGGTAATGATCTTG+TGG + chr7_1:53576886-53576905 Msa1024360:CDS 30.0%
! AATGATCTTGTGGTATTGAA+TGG + chr7_1:53576896-53576915 Msa1024360:CDS 30.0%
! AGTTCGAAACTTTTAGATTC+AGG + chr7_1:53576971-53576990 Msa1024360:CDS 30.0%
! GTTCGAAACTTTTAGATTCA+GGG + chr7_1:53576972-53576991 Msa1024360:CDS 30.0%
CACAACAGAAAGAACTATAT+GGG + chr7_1:53577015-53577034 Msa1024360:CDS 30.0%
TTGCTTGTAAGTTTCATGTT+TGG - chr7_1:53577073-53577092 None:intergenic 30.0%
CTTACAAGCAACAAAATAAC+AGG + chr7_1:53577082-53577101 Msa1024360:CDS 30.0%
AGAAAGTAAAACTCACATCA+TGG + chr7_1:53577107-53577126 Msa1024360:CDS 30.0%
GTAAAAATCTTACCATTCCA+CGG - chr7_1:53577241-53577260 None:intergenic 30.0%
! TGGAATGGTAAGATTTTTAC+AGG + chr7_1:53577241-53577260 Msa1024360:CDS 30.0%
AGAATGAATGGAAAGTAACA+TGG + chr7_1:53577425-53577444 Msa1024360:CDS 30.0%
AACATGGAATAGTCATGAAA+TGG + chr7_1:53577441-53577460 Msa1024360:CDS 30.0%
ATAGTTTCTGTGAATATGAC+CGG - chr7_1:53576180-53576199 None:intergenic 30.0%
TTATATATGGAACAAGGGTA+TGG + chr7_1:53576609-53576628 Msa1024360:intron 30.0%
AGTGAGCTCTACATTTAATT+TGG - chr7_1:53576706-53576725 None:intergenic 30.0%
! CAGACTTATCAATTTTCTTC+TGG + chr7_1:53576848-53576867 Msa1024360:CDS 30.0%
!! TGATAATGGTAATGATCTTG+TGG + chr7_1:53576886-53576905 Msa1024360:CDS 30.0%
! AATGATCTTGTGGTATTGAA+TGG + chr7_1:53576896-53576915 Msa1024360:CDS 30.0%
! AGTTCGAAACTTTTAGATTC+AGG + chr7_1:53576971-53576990 Msa1024360:CDS 30.0%
! GTTCGAAACTTTTAGATTCA+GGG + chr7_1:53576972-53576991 Msa1024360:CDS 30.0%
CACAACAGAAAGAACTATAT+GGG + chr7_1:53577015-53577034 Msa1024360:CDS 30.0%
TTGCTTGTAAGTTTCATGTT+TGG - chr7_1:53577073-53577092 None:intergenic 30.0%
CTTACAAGCAACAAAATAAC+AGG + chr7_1:53577082-53577101 Msa1024360:CDS 30.0%
AGAAAGTAAAACTCACATCA+TGG + chr7_1:53577107-53577126 Msa1024360:CDS 30.0%
GTAAAAATCTTACCATTCCA+CGG - chr7_1:53577241-53577260 None:intergenic 30.0%
! TGGAATGGTAAGATTTTTAC+AGG + chr7_1:53577241-53577260 Msa1024360:CDS 30.0%
AGAATGAATGGAAAGTAACA+TGG + chr7_1:53577425-53577444 Msa1024360:CDS 30.0%
AACATGGAATAGTCATGAAA+TGG + chr7_1:53577441-53577460 Msa1024360:CDS 30.0%
AACTACTGGTGATTAACAGA+TGG - chr7_1:53576203-53576222 None:intergenic 35.0%
! GGTATTGAATGGAAAGAAAG+AGG + chr7_1:53576907-53576926 Msa1024360:CDS 35.0%
ATGGAAAGAAAGAGGTGATT+TGG + chr7_1:53576915-53576934 Msa1024360:CDS 35.0%
CTTGAATTGGTTGCAACATT+CGG - chr7_1:53576953-53576972 None:intergenic 35.0%
GCACAACAGAAAGAACTATA+TGG + chr7_1:53577014-53577033 Msa1024360:CDS 35.0%
TTTGGCAACATTACGTTTGA+AGG - chr7_1:53577055-53577074 None:intergenic 35.0%
! CTATACCTGAAGTGTTCATA+TGG + chr7_1:53577185-53577204 Msa1024360:CDS 35.0%
TCATTCCATATGAACACTTC+AGG - chr7_1:53577193-53577212 None:intergenic 35.0%
AAGGAAACTGTGAAGAGAAA+TGG + chr7_1:53577389-53577408 Msa1024360:CDS 35.0%
AAACTGTGAAGAGAAATGGT+GGG + chr7_1:53577393-53577412 Msa1024360:CDS 35.0%
GGGATGAAAAGAAGAATGAA+TGG + chr7_1:53577413-53577432 Msa1024360:CDS 35.0%
ATGGAATAGTCATGAAATGG+TGG + chr7_1:53577444-53577463 Msa1024360:CDS 35.0%
AACTACTGGTGATTAACAGA+TGG - chr7_1:53576203-53576222 None:intergenic 35.0%
! GGTATTGAATGGAAAGAAAG+AGG + chr7_1:53576907-53576926 Msa1024360:CDS 35.0%
ATGGAAAGAAAGAGGTGATT+TGG + chr7_1:53576915-53576934 Msa1024360:CDS 35.0%
CTTGAATTGGTTGCAACATT+CGG - chr7_1:53576953-53576972 None:intergenic 35.0%
GCACAACAGAAAGAACTATA+TGG + chr7_1:53577014-53577033 Msa1024360:CDS 35.0%
TTTGGCAACATTACGTTTGA+AGG - chr7_1:53577055-53577074 None:intergenic 35.0%
! CTATACCTGAAGTGTTCATA+TGG + chr7_1:53577185-53577204 Msa1024360:CDS 35.0%
TCATTCCATATGAACACTTC+AGG - chr7_1:53577193-53577212 None:intergenic 35.0%
AAGGAAACTGTGAAGAGAAA+TGG + chr7_1:53577389-53577408 Msa1024360:CDS 35.0%
AAACTGTGAAGAGAAATGGT+GGG + chr7_1:53577393-53577412 Msa1024360:CDS 35.0%
GGGATGAAAAGAAGAATGAA+TGG + chr7_1:53577413-53577432 Msa1024360:CDS 35.0%
ATGGAATAGTCATGAAATGG+TGG + chr7_1:53577444-53577463 Msa1024360:CDS 35.0%
TACTCGCATCTTGACTGAAA+TGG + chr7_1:53576109-53576128 Msa1024360:CDS 40.0%
CTTGACTGAAATGGATGTTG+TGG + chr7_1:53576118-53576137 Msa1024360:CDS 40.0%
!! GAAAAAGCACCGAGAAAATG+TGG + chr7_1:53576140-53576159 Msa1024360:CDS 40.0%
! GAACACAGTCCACATTTTCT+CGG - chr7_1:53576152-53576171 None:intergenic 40.0%
AAAGCCTGCAAGATTTCAGA+GGG + chr7_1:53576749-53576768 Msa1024360:intron 40.0%
!! CAGAGGGGTGTTGAAAAAAA+TGG + chr7_1:53576765-53576784 Msa1024360:intron 40.0%
GACATGTTCGCCAAGTTAAA+AGG + chr7_1:53576787-53576806 Msa1024360:intron 40.0%
TCGCCAAGTTAAAAGGAGAA+AGG + chr7_1:53576794-53576813 Msa1024360:intron 40.0%
CGCCAAGTTAAAAGGAGAAA+GGG + chr7_1:53576795-53576814 Msa1024360:intron 40.0%
GCCAAGTTAAAAGGAGAAAG+GGG + chr7_1:53576796-53576815 Msa1024360:intron 40.0%
!! ACCCCTTTCTCCTTTTAACT+TGG - chr7_1:53576800-53576819 None:intergenic 40.0%
TTGTGCCTTCAAGTAGTACA+AGG - chr7_1:53577000-53577019 None:intergenic 40.0%
ACATTACGTTTGAAGGATGC+TGG - chr7_1:53577048-53577067 None:intergenic 40.0%
! ACACCTTTTGATCCATCCAT+TGG + chr7_1:53577133-53577152 Msa1024360:CDS 40.0%
CTTCCAATGGATGGATCAAA+AGG - chr7_1:53577139-53577158 None:intergenic 40.0%
AAAGAGAAGCTTCCAATGGA+TGG - chr7_1:53577148-53577167 None:intergenic 40.0%
ACTCAAAGAGAAGCTTCCAA+TGG - chr7_1:53577152-53577171 None:intergenic 40.0%
!! GCTTCTCTTTGAGTGTTGAA+AGG + chr7_1:53577158-53577177 Msa1024360:CDS 40.0%
GGAATGAAACTCAACCGTAT+TGG + chr7_1:53577206-53577225 Msa1024360:CDS 40.0%
ATGACAACTCATTATCTCGG+TGG + chr7_1:53577274-53577293 Msa1024360:CDS 40.0%
TATCTCGGTGGTTTACATGT+TGG + chr7_1:53577286-53577305 Msa1024360:CDS 40.0%
GGTTTACATGTTGGAGATGA+TGG + chr7_1:53577295-53577314 Msa1024360:CDS 40.0%
GAAACTGTGAAGAGAAATGG+TGG + chr7_1:53577392-53577411 Msa1024360:CDS 40.0%
TACTCGCATCTTGACTGAAA+TGG + chr7_1:53576109-53576128 Msa1024360:CDS 40.0%
CTTGACTGAAATGGATGTTG+TGG + chr7_1:53576118-53576137 Msa1024360:CDS 40.0%
!! GAAAAAGCACCGAGAAAATG+TGG + chr7_1:53576140-53576159 Msa1024360:CDS 40.0%
! GAACACAGTCCACATTTTCT+CGG - chr7_1:53576152-53576171 None:intergenic 40.0%
AAAGCCTGCAAGATTTCAGA+GGG + chr7_1:53576749-53576768 Msa1024360:intron 40.0%
!! CAGAGGGGTGTTGAAAAAAA+TGG + chr7_1:53576765-53576784 Msa1024360:intron 40.0%
GACATGTTCGCCAAGTTAAA+AGG + chr7_1:53576787-53576806 Msa1024360:intron 40.0%
TCGCCAAGTTAAAAGGAGAA+AGG + chr7_1:53576794-53576813 Msa1024360:intron 40.0%
CGCCAAGTTAAAAGGAGAAA+GGG + chr7_1:53576795-53576814 Msa1024360:intron 40.0%
GCCAAGTTAAAAGGAGAAAG+GGG + chr7_1:53576796-53576815 Msa1024360:intron 40.0%
!! ACCCCTTTCTCCTTTTAACT+TGG - chr7_1:53576800-53576819 None:intergenic 40.0%
TTGTGCCTTCAAGTAGTACA+AGG - chr7_1:53577000-53577019 None:intergenic 40.0%
ACATTACGTTTGAAGGATGC+TGG - chr7_1:53577048-53577067 None:intergenic 40.0%
! ACACCTTTTGATCCATCCAT+TGG + chr7_1:53577133-53577152 Msa1024360:CDS 40.0%
CTTCCAATGGATGGATCAAA+AGG - chr7_1:53577139-53577158 None:intergenic 40.0%
AAAGAGAAGCTTCCAATGGA+TGG - chr7_1:53577148-53577167 None:intergenic 40.0%
ACTCAAAGAGAAGCTTCCAA+TGG - chr7_1:53577152-53577171 None:intergenic 40.0%
!! GCTTCTCTTTGAGTGTTGAA+AGG + chr7_1:53577158-53577177 Msa1024360:CDS 40.0%
GGAATGAAACTCAACCGTAT+TGG + chr7_1:53577206-53577225 Msa1024360:CDS 40.0%
ATGACAACTCATTATCTCGG+TGG + chr7_1:53577274-53577293 Msa1024360:CDS 40.0%
TATCTCGGTGGTTTACATGT+TGG + chr7_1:53577286-53577305 Msa1024360:CDS 40.0%
GGTTTACATGTTGGAGATGA+TGG + chr7_1:53577295-53577314 Msa1024360:CDS 40.0%
GAAACTGTGAAGAGAAATGG+TGG + chr7_1:53577392-53577411 Msa1024360:CDS 40.0%
! GTCAAGATGCGAGTACTGTT+TGG - chr7_1:53576104-53576123 None:intergenic 45.0%
TCTGTGAATATGACCGGTCT+TGG - chr7_1:53576174-53576193 None:intergenic 45.0%
CAAAGCCTGCAAGATTTCAG+AGG + chr7_1:53576748-53576767 Msa1024360:intron 45.0%
AAGCCTGCAAGATTTCAGAG+GGG + chr7_1:53576750-53576769 Msa1024360:intron 45.0%
GGGAACCTTGTACTACTTGA+AGG + chr7_1:53576992-53577011 Msa1024360:CDS 45.0%
!! CATGTTGGAGATGATGGAGA+AGG + chr7_1:53577301-53577320 Msa1024360:CDS 45.0%
! GTCAAGATGCGAGTACTGTT+TGG - chr7_1:53576104-53576123 None:intergenic 45.0%
TCTGTGAATATGACCGGTCT+TGG - chr7_1:53576174-53576193 None:intergenic 45.0%
CAAAGCCTGCAAGATTTCAG+AGG + chr7_1:53576748-53576767 Msa1024360:intron 45.0%
AAGCCTGCAAGATTTCAGAG+GGG + chr7_1:53576750-53576769 Msa1024360:intron 45.0%
GGGAACCTTGTACTACTTGA+AGG + chr7_1:53576992-53577011 Msa1024360:CDS 45.0%
!! CATGTTGGAGATGATGGAGA+AGG + chr7_1:53577301-53577320 Msa1024360:CDS 45.0%
!! ATTATTATATTAAGATAATT+CGG - chr7_1:53576251-53576270 None:intergenic 5.0%
!! ATTATTATATTAAGATAATT+CGG - chr7_1:53576251-53576270 None:intergenic 5.0%
! TGTGGACTGTGTTCCAAGAC+CGG + chr7_1:53576158-53576177 Msa1024360:CDS 50.0%
!! ACACCCCTCTGAAATCTTGC+AGG - chr7_1:53576756-53576775 None:intergenic 50.0%
! ACTCAACCGTATTGGCGAAC+TGG + chr7_1:53577214-53577233 Msa1024360:CDS 50.0%
! TGTGGACTGTGTTCCAAGAC+CGG + chr7_1:53576158-53576177 Msa1024360:CDS 50.0%
!! ACACCCCTCTGAAATCTTGC+AGG - chr7_1:53576756-53576775 None:intergenic 50.0%
! ACTCAACCGTATTGGCGAAC+TGG + chr7_1:53577214-53577233 Msa1024360:CDS 50.0%
!! GGTTGCAACATTCGGTGCGT+TGG - chr7_1:53576945-53576964 None:intergenic 55.0%
CACGGACCAGTTCGCCAATA+CGG - chr7_1:53577223-53577242 None:intergenic 55.0%
!! GGTTGCAACATTCGGTGCGT+TGG - chr7_1:53576945-53576964 None:intergenic 55.0%
CACGGACCAGTTCGCCAATA+CGG - chr7_1:53577223-53577242 None:intergenic 55.0%
! CGTATTGGCGAACTGGTCCG+TGG + chr7_1:53577221-53577240 Msa1024360:CDS 60.0%
TGGCGAACTGGTCCGTGGAA+TGG + chr7_1:53577226-53577245 Msa1024360:CDS 60.0%
! CGTATTGGCGAACTGGTCCG+TGG + chr7_1:53577221-53577240 Msa1024360:CDS 60.0%
TGGCGAACTGGTCCGTGGAA+TGG + chr7_1:53577226-53577245 Msa1024360:CDS 60.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 53576077 53577471 53576077 ID=Msa1024360;Name=Msa1024360
chr7_1 mRNA 53576077 53577471 53576077 ID=Msa1024360-mRNA-1;Parent=Msa1024360;Name=Msa1024360-mRNA-1;_AED=0.30;_eAED=0.30;_QI=0|0|0|0.5|1|1|2|0|251
chr7_1 exon 53576077 53576205 53576077 ID=Msa1024360-mRNA-1:exon:10572;Parent=Msa1024360-mRNA-1
chr7_1 exon 53576845 53577471 53576845 ID=Msa1024360-mRNA-1:exon:10573;Parent=Msa1024360-mRNA-1
chr7_1 CDS 53576077 53576205 53576077 ID=Msa1024360-mRNA-1:cds;Parent=Msa1024360-mRNA-1
chr7_1 CDS 53576845 53577471 53576845 ID=Msa1024360-mRNA-1:cds;Parent=Msa1024360-mRNA-1
Gene Sequence

>Msa1024360

ATGCGAAGATTAAAGAAAGGTCGTCCAAACAGTACTCGCATCTTGACTGAAATGGATGTTGTGGAAAAAGCACCGAGAAAATGTGGACTGTGTTCCAAGACCGGTCATATTCACAGAAACTATCCATCTGGGCAGACTTATCAATTTTCTTCTGGTGTTGTTAAAATATCTGATAATGGTAATGATCTTGTGGTATTGAATGGAAAGAAAGAGGTGATTTGGACATCCAACGCACCGAATGTTGCAACCAATTCAAGTTCGAAACTTTTAGATTCAGGGAACCTTGTACTACTTGAAGGCACAACAGAAAGAACTATATGGGAGAGTTTCCAGCATCCTTCAAACGTAATGTTGCCAAACATGAAACTTACAAGCAACAAAATAACAGGTGAGAAAGTAAAACTCACATCATGGAAAACACCTTTTGATCCATCCATTGGAAGCTTCTCTTTGAGTGTTGAAAGGCTTACTATACCTGAAGTGTTCATATGGAATGAAACTCAACCGTATTGGCGAACTGGTCCGTGGAATGGTAAGATTTTTACAGGACTTCCATATATGACAACTCATTATCTCGGTGGTTTACATGTTGGAGATGATGGAGAAGGAAATGTTTCATTCTTTCAAATAACATCGGATACAGTTAGTCTCATAATCTATAATCTAAGTTCAGAAGGAAACTGTGAAGAGAAATGGTGGGATGAAAAGAAGAATGAATGGAAAGTAACATGGAATAGTCATGAAATGGTGGAATGA
Protein sequence

>Msa1024360

MRRLKKGRPNSTRILTEMDVVEKAPRKCGLCSKTGHIHRNYPSGQTYQFSSGVVKISDNGNDLVVLNGKKEVIWTSNAPNVATNSSSKLLDSGNLVLLEGTTERTIWESFQHPSNVMLPNMKLTSNKITGEKVKLTSWKTPFDPSIGSFSLSVERLTIPEVFIWNETQPYWRTGPWNGKIFTGLPYMTTHYLGGLHVGDDGEGNVSFFQITSDTVSLIIYNLSSEGNCEEKWWDEKKNEWKVTWNSHEMVE*