Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1031350 | XP_003624576.1 | 99.471 | 189 | 1 | 0 | 81 | 269 | 1 | 189 | 1.01e-132 | 383 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1031350 | sp|Q5I0H4|TMCO1_RAT | 46.927 | 179 | 92 | 2 | 90 | 266 | 5 | 182 | 9.36e-46 | 155 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1031350 | B7FGM9 | 99.471 | 189 | 1 | 0 | 81 | 269 | 1 | 189 | 4.81e-133 | 383 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0063940 | Msa1031350 | 0.810393 | 1.178848e-50 | -8.615850e-47 |
Msa0071410 | Msa1031350 | 0.808987 | 2.364341e-50 | -8.615850e-47 |
Msa0674480 | Msa1031350 | 0.809082 | 2.255358e-50 | -8.615850e-47 |
Msa0795750 | Msa1031350 | 0.830821 | 2.366142e-55 | -8.615850e-47 |
Msa0833530 | Msa1031350 | 0.839031 | 2.020572e-57 | -8.615850e-47 |
Msa0195640 | Msa1031350 | 0.819167 | 1.338952e-52 | -8.615850e-47 |
Msa1031350 | Msa1070460 | 0.986350 | 1.706281e-166 | -8.615850e-47 |
Msa1031350 | Msa1166660 | 0.802983 | 4.330546e-49 | -8.615850e-47 |
Msa1031350 | Msa1422590 | 0.821516 | 3.874161e-53 | -8.615850e-47 |
Msa1031350 | Msa1434740 | 0.808342 | 3.247356e-50 | -8.615850e-47 |
Msa0527190 | Msa1031350 | 0.801239 | 9.889383e-49 | -8.615850e-47 |
Msa0579220 | Msa1031350 | 0.803434 | 3.492160e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1031350 | MtrunA17_Chr7g0252821 | 99.471 | 189 | 1 | 0 | 81 | 269 | 1 | 189 | 9.27e-137 | 383 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1031350 | AT5G06660.1 | 83.511 | 188 | 27 | 2 | 85 | 268 | 8 | 195 | 5.77e-101 | 293 |
Msa1031350 | AT3G12030.1 | 83.069 | 189 | 28 | 2 | 85 | 269 | 8 | 196 | 1.40e-93 | 274 |
Find 74 sgRNAs with CRISPR-Local
Find 422 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTGGTTCTCTTTGTGGTATT+TGG | 0.104469 | 7_1:-65944860 | Msa1031350:CDS |
GGTTCTTCTAATATCTGATT+AGG | 0.231594 | 7_1:+65946778 | None:intergenic |
AAAAGGCTTGAATGGCAATT+TGG | 0.263436 | 7_1:+65944802 | None:intergenic |
AAATTGCCATTCAAGCCTTT+TGG | 0.268584 | 7_1:-65944800 | Msa1031350:CDS |
TGGTTCTCTTTGTGGTATTT+GGG | 0.271042 | 7_1:-65944859 | Msa1031350:CDS |
ACGAAGACGGTGATGGGTTT+TGG | 0.278053 | 7_1:+65946757 | None:intergenic |
AACAAATTTGCAGAAGTTCT+TGG | 0.285687 | 7_1:-65944681 | Msa1031350:CDS |
GAACTAGATCAACTGGTCTT+TGG | 0.297367 | 7_1:+65944608 | None:intergenic |
TTTCTAGGTTGATGTTAATC+TGG | 0.297814 | 7_1:-65944558 | Msa1031350:three_prime_UTR |
CTTCATAGTCTCGAGTTTCT+TGG | 0.298943 | 7_1:+65945009 | None:intergenic |
GTTCTTCTAATATCTGATTA+GGG | 0.310016 | 7_1:+65946779 | None:intergenic |
AACTAGATCAACTGGTCTTT+GGG | 0.342623 | 7_1:+65944609 | None:intergenic |
CAAATTTGTTCTGATACTAA+TGG | 0.343691 | 7_1:+65944694 | None:intergenic |
GGTTGCTCTGGTTCTCTTTG+TGG | 0.348482 | 7_1:-65944867 | Msa1031350:CDS |
AGCTGTGAACGCACGCGCCT+TGG | 0.353951 | 7_1:-65946706 | Msa1031350:CDS |
ATAGGAGAGTTTCTTCGCTT+TGG | 0.360635 | 7_1:-65944375 | Msa1031350:three_prime_UTR |
CCGCCAAGGGGTGCAGGTGC+TGG | 0.379709 | 7_1:-65944650 | Msa1031350:CDS |
ACAAATTTGCAGAAGTTCTT+GGG | 0.395345 | 7_1:-65944680 | Msa1031350:CDS |
CTGGTCTTTGGGTCTGGCAT+TGG | 0.395377 | 7_1:+65944620 | None:intergenic |
GCGAAGGTTCTTGTAAGAAT+TGG | 0.409536 | 7_1:+65945051 | None:intergenic |
CATAACAGAACTAGATCAAC+TGG | 0.415941 | 7_1:+65944601 | None:intergenic |
AGAAACAAAGACAGCAAACT+TGG | 0.427908 | 7_1:+65945205 | None:intergenic |
ATTCAGATTCACTCACTCTC+TGG | 0.432865 | 7_1:-65946822 | Msa1031350:intron |
ATCCGGTGGTGTGGTTGCTC+TGG | 0.434250 | 7_1:-65944879 | Msa1031350:CDS |
TTTGCACCGCCAAGGGGTGC+AGG | 0.441884 | 7_1:-65944656 | Msa1031350:CDS |
TCTCTCTTCAAGTTTAAATC+CGG | 0.442713 | 7_1:-65944896 | Msa1031350:CDS |
CTTGGAAGCTTTGTCGATAG+AGG | 0.450316 | 7_1:+65945027 | None:intergenic |
CTCGGATGGCCTCACTGTTG+TGG | 0.453737 | 7_1:-65945134 | Msa1031350:CDS |
CTGCTCAATTCGCTATTTGA+AGG | 0.455366 | 7_1:-65944836 | Msa1031350:CDS |
GATCAACTGGTCTTTGGGTC+TGG | 0.458148 | 7_1:+65944614 | None:intergenic |
CACGTTCTTGCGATTCCTCA+AGG | 0.462160 | 7_1:-65946676 | Msa1031350:intron |
CCAGCACCTGCACCCCTTGG+CGG | 0.467860 | 7_1:+65944650 | None:intergenic |
TCGGATGGCCTCACTGTTGT+GGG | 0.468742 | 7_1:-65945133 | Msa1031350:CDS |
CTTCTCAGATTTCAAGTACT+CGG | 0.477023 | 7_1:-65945152 | Msa1031350:CDS |
ACAAGCCCAAAAGGCTTGAA+TGG | 0.484472 | 7_1:+65944794 | None:intergenic |
ATCTTCATAACAAGCCCAAA+AGG | 0.485077 | 7_1:+65944785 | None:intergenic |
TTGTCTGTGAGGCCATCTCA+TGG | 0.486509 | 7_1:-65945090 | Msa1031350:CDS |
TGCTGGTCTCCCTAGGAGAA+TGG | 0.489377 | 7_1:+65944503 | None:intergenic |
CTCTTCAAGTTTAAATCCGG+TGG | 0.507122 | 7_1:-65944893 | Msa1031350:CDS |
AGACCAGCACCTGCACCCCT+TGG | 0.507589 | 7_1:+65944647 | None:intergenic |
TTGCTTGTCTACCGTACCAT+AGG | 0.517443 | 7_1:-65944393 | Msa1031350:three_prime_UTR |
GAGTTGACGAAGACGGTGAT+GGG | 0.529556 | 7_1:+65946751 | None:intergenic |
CGAGTACTTGAAATCTGAGA+AGG | 0.540066 | 7_1:+65945153 | None:intergenic |
AGTCACGACTAGATTCTTTG+AGG | 0.544166 | 7_1:+65944921 | None:intergenic |
AGAGTTGACGAAGACGGTGA+TGG | 0.546853 | 7_1:+65946750 | None:intergenic |
AAAATCATGCTGGTCTCCCT+AGG | 0.547624 | 7_1:+65944496 | None:intergenic |
CAATTCGCTATTTGAAGGCA+AGG | 0.549223 | 7_1:-65944831 | Msa1031350:CDS |
TGTCTGTGAGGCCATCTCAT+GGG | 0.550860 | 7_1:-65945089 | Msa1031350:CDS |
CAAGTTTAAATCCGGTGGTG+TGG | 0.561902 | 7_1:-65944888 | Msa1031350:CDS |
AACCAGAGCAACCACACCAC+CGG | 0.570086 | 7_1:+65944877 | None:intergenic |
TATAACAATTAAAATCATGC+TGG | 0.570708 | 7_1:+65944486 | None:intergenic |
AAAGCGAAGAAACTCTCCTA+TGG | 0.571285 | 7_1:+65944377 | None:intergenic |
TCAGATTTCAAGTACTCGGA+TGG | 0.574798 | 7_1:-65945148 | Msa1031350:CDS |
AAATGCCATGGAACAATCAG+TGG | 0.579830 | 7_1:+65944733 | None:intergenic |
ATGAGCCATCGAGGGTTGCA+AGG | 0.585212 | 7_1:-65944764 | Msa1031350:CDS |
CTTTGTCGATAGAGGAGCGA+AGG | 0.585269 | 7_1:+65945035 | None:intergenic |
CATTACCTTGCAACCCTCGA+TGG | 0.592832 | 7_1:+65944759 | None:intergenic |
TGATCCCACTGATTGTTCCA+TGG | 0.598157 | 7_1:-65944738 | Msa1031350:CDS |
GTAAATAAGAACCCATGAGA+TGG | 0.599701 | 7_1:+65945078 | None:intergenic |
TTCTGATACTAATGGAACAC+AGG | 0.602611 | 7_1:+65944702 | None:intergenic |
CTGTACAGCTATTGTCTGTG+AGG | 0.606267 | 7_1:-65945101 | Msa1031350:CDS |
ATCTGAGAAGGGATATGCCA+TGG | 0.607371 | 7_1:+65945165 | None:intergenic |
CAGGAAGTATAGAAATGCCA+TGG | 0.612214 | 7_1:+65944721 | None:intergenic |
CAAGAACGTGAACGAAGCCA+AGG | 0.613216 | 7_1:+65946689 | None:intergenic |
GAGAAGGGATATGCCATGGA+TGG | 0.614420 | 7_1:+65945169 | None:intergenic |
GAAGAAACTCTCCTATGGTA+CGG | 0.615810 | 7_1:+65944382 | None:intergenic |
TTATGAAGATGAGCCATCGA+GGG | 0.622078 | 7_1:-65944772 | Msa1031350:CDS |
AGAGAAAGAGTTGACGAAGA+CGG | 0.626905 | 7_1:+65946744 | None:intergenic |
GAGTACTTGAAATCTGAGAA+GGG | 0.629348 | 7_1:+65945154 | None:intergenic |
GGTTCTTGTAAGAATTGGTG+CGG | 0.654185 | 7_1:+65945056 | None:intergenic |
CTTTGAGGCTAGTCTCAACA+CGG | 0.657831 | 7_1:+65944936 | None:intergenic |
AATGCCATGGAACAATCAGT+GGG | 0.668389 | 7_1:+65944734 | None:intergenic |
GTTATGAAGATGAGCCATCG+AGG | 0.685544 | 7_1:-65944773 | Msa1031350:CDS |
AAGAGATACCCACAACAGTG+AGG | 0.718334 | 7_1:+65945125 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTATATTTTATTTTATTTTT+CGG | + | chr7_1:65949639-65949658 | None:intergenic | 0.0% |
!!! | TAATAAATGCATTATTTTTT+TGG | - | chr7_1:65945932-65945951 | Msa1031350:intron | 10.0% |
!!! | AATAAATGCATTATTTTTTT+GGG | - | chr7_1:65945933-65945952 | Msa1031350:intron | 10.0% |
!! | GAAAAAAAAAACTTTATATT+TGG | - | chr7_1:65946706-65946725 | Msa1031350:CDS | 10.0% |
!!! | TAGTTTATTTATTTTTACAA+TGG | - | chr7_1:65947009-65947028 | Msa1031350:intron | 10.0% |
!! | TATACAAAAATAAATTTACA+AGG | - | chr7_1:65947088-65947107 | Msa1031350:intron | 10.0% |
!! | AATAATCTTAAATTATTTCA+TGG | + | chr7_1:65947489-65947508 | None:intergenic | 10.0% |
!!! | AATAAATAATTTAGTTTGTT+TGG | - | chr7_1:65947580-65947599 | Msa1031350:intron | 10.0% |
!!! | ATAAAATAGATTTTTTTTAG+AGG | - | chr7_1:65947865-65947884 | Msa1031350:intron | 10.0% |
!!! | AAAAATAGATTTTTTTTAGA+GGG | + | chr7_1:65948281-65948300 | None:intergenic | 10.0% |
!!! | AAAAAATAGATTTTTTTTAG+AGG | + | chr7_1:65948282-65948301 | None:intergenic | 10.0% |
!!! | AAAAAAAGTGATTTTTATTA+AGG | + | chr7_1:65947981-65948000 | None:intergenic | 10.0% |
!!! | AAAAAATAATTTAGTTTGTT+TGG | - | chr7_1:65949301-65949320 | Msa1031350:intron | 10.0% |
!! | AATTATAAAATATATGAAGT+TGG | - | chr7_1:65950823-65950842 | Msa1031350:intron | 10.0% |
!! | AATAAATTCATTAAAATTGT+AGG | + | chr7_1:65950925-65950944 | None:intergenic | 10.0% |
! | CGCGGGGGGGGGGGGGGGGG+GGG | - | chr7_1:65945283-65945302 | Msa1031350:intron | 100.0% |
! | GCGGGGGGGGGGGGGGGGGG+GGG | - | chr7_1:65945284-65945303 | Msa1031350:intron | 100.0% |
! | CGGGGGGGGGGGGGGGGGGG+GGG | - | chr7_1:65945285-65945304 | Msa1031350:intron | 100.0% |
! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr7_1:65945286-65945305 | Msa1031350:intron | 100.0% |
! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr7_1:65945286-65945305 | Msa1031350:intron | 100.0% |
! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr7_1:65945286-65945305 | Msa1031350:intron | 100.0% |
! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr7_1:65945286-65945305 | Msa1031350:intron | 100.0% |
!! | ATATATAACTTAGATTCTAT+TGG | - | chr7_1:65944705-65944724 | Msa1031350:CDS | 15.0% |
!! | TGGAATAGTATAAAAATAAT+TGG | - | chr7_1:65944879-65944898 | Msa1031350:CDS | 15.0% |
!! | GGAATAGTATAAAAATAATT+GGG | - | chr7_1:65944880-65944899 | Msa1031350:CDS | 15.0% |
!!! | ATTTTTTATAGTTAATAGCT+TGG | + | chr7_1:65945497-65945516 | None:intergenic | 15.0% |
!! | TTTGAAAAAAGATTAATGAA+TGG | + | chr7_1:65946178-65946197 | None:intergenic | 15.0% |
!!! | TATTAATTTGATTGAAAGAA+AGG | - | chr7_1:65946737-65946756 | Msa1031350:CDS | 15.0% |
!!! | ATTAATTTGATTGAAAGAAA+GGG | - | chr7_1:65946738-65946757 | Msa1031350:CDS | 15.0% |
!!! | TAACCAATTTTTCTATTTAA+TGG | - | chr7_1:65947057-65947076 | Msa1031350:intron | 15.0% |
!!! | AATTTTTCTATTTAATGGAA+GGG | - | chr7_1:65947062-65947081 | Msa1031350:intron | 15.0% |
!!! | TTGAATCTAGATTATTTTTT+TGG | + | chr7_1:65947193-65947212 | None:intergenic | 15.0% |
!!! | TATTTTTTTTTCCTCAAAAA+AGG | + | chr7_1:65947284-65947303 | None:intergenic | 15.0% |
!!! | GATTTTTTGTTACAAAATTA+GGG | - | chr7_1:65947621-65947640 | Msa1031350:intron | 15.0% |
!!! | TTTTAAAAATCTGTAACAAA+CGG | + | chr7_1:65948366-65948385 | None:intergenic | 15.0% |
!!! | CATAAAATCTCTAAAATATA+GGG | + | chr7_1:65948112-65948131 | None:intergenic | 15.0% |
!!! | TCATAAAATCTCTAAAATAT+AGG | + | chr7_1:65948113-65948132 | None:intergenic | 15.0% |
!!! | ACAAATAATTTTAGTTTGTT+TGG | - | chr7_1:65948187-65948206 | Msa1031350:intron | 15.0% |
!!! | AAAATAGATTTTTTTTAGAG+GGG | + | chr7_1:65947867-65947886 | None:intergenic | 15.0% |
!!! | TTTTAAAAATCTGTAACAAA+CGG | - | chr7_1:65948366-65948385 | Msa1031350:intron | 15.0% |
!!! | AGATTTTGATTTTTCATAAA+GGG | + | chr7_1:65948777-65948796 | None:intergenic | 15.0% |
!!! | TAGATTTTGATTTTTCATAA+AGG | + | chr7_1:65948778-65948797 | None:intergenic | 15.0% |
!!! | AACAAATAATTTAGTTTGTT+TGG | - | chr7_1:65948836-65948855 | Msa1031350:intron | 15.0% |
!!! | CAAAAAATAGATTTTTTTAG+AGG | + | chr7_1:65949396-65949415 | None:intergenic | 15.0% |
!!! | TTTGCATAAACTTTTTTTTA+AGG | - | chr7_1:65949593-65949612 | Msa1031350:intron | 15.0% |
!!! | TTGCATAAACTTTTTTTTAA+GGG | - | chr7_1:65949594-65949613 | Msa1031350:intron | 15.0% |
!!! | TTTTTTTTTTTTTTTGAAGG+AGG | + | chr7_1:65949844-65949863 | None:intergenic | 15.0% |
!!! | CACTTTTTTTTTTTTTTTGA+AGG | + | chr7_1:65949847-65949866 | None:intergenic | 15.0% |
!! | TTATAGATATACTTAACAAA+CGG | - | chr7_1:65950717-65950736 | Msa1031350:intron | 15.0% |
!! | ATAAAAAATGAATATAGGTT+TGG | + | chr7_1:65951388-65951407 | None:intergenic | 15.0% |
!! | AGAACATAAAAAATGAATAT+AGG | + | chr7_1:65951393-65951412 | None:intergenic | 15.0% |
!!! | ATTTTTTATGTTCTATAAAC+AGG | - | chr7_1:65951399-65951418 | Msa1031350:intron | 15.0% |
!!! | ATTTTAGTTTTATGGTTATT+TGG | - | chr7_1:65952251-65952270 | Msa1031350:intron | 15.0% |
!! | AATGATTCACCTAATTATAT+GGG | - | chr7_1:65944406-65944425 | Msa1031350:three_prime_UTR | 20.0% |
!! | TGTATCAAAAGAATTGTTTA+TGG | - | chr7_1:65944859-65944878 | Msa1031350:CDS | 20.0% |
!!! | AAATAGGTTTTTCAAATGTT+TGG | - | chr7_1:65945164-65945183 | Msa1031350:CDS | 20.0% |
!! | TATGGAAAAATATCCAAAAT+TGG | - | chr7_1:65945677-65945696 | Msa1031350:intron | 20.0% |
!! | CTTCCATTAAATAGAAAAAT+TGG | + | chr7_1:65947063-65947082 | None:intergenic | 20.0% |
!!! | CAATTTTTCTATTTAATGGA+AGG | - | chr7_1:65947061-65947080 | Msa1031350:intron | 20.0% |
!!! | CGATTTTTTGTTACAAAATT+AGG | - | chr7_1:65947620-65947639 | Msa1031350:intron | 20.0% |
!! | TTAAAAAAGCTATAACAAAC+GGG | + | chr7_1:65948439-65948458 | None:intergenic | 20.0% |
!! | CTTAAAAAAGCTATAACAAA+CGG | + | chr7_1:65948438-65948457 | None:intergenic | 20.0% |
!! | TTGGATACAACTATATAAAA+GGG | + | chr7_1:65948206-65948225 | None:intergenic | 20.0% |
!! | TTTGGATACAACTATATAAA+AGG | + | chr7_1:65948205-65948224 | None:intergenic | 20.0% |
!!! | AACAAATAATCTAGTTTGTT+TGG | + | chr7_1:65947960-65947979 | None:intergenic | 20.0% |
!! | CTTAAAAAAGCTATAACAAA+CGG | - | chr7_1:65948438-65948457 | Msa1031350:intron | 20.0% |
!! | TTAAAAAAGCTATAACAAAC+GGG | - | chr7_1:65948439-65948458 | Msa1031350:intron | 20.0% |
!!! | TTATTTTAATCCGTAACAAA+CGG | - | chr7_1:65948750-65948769 | Msa1031350:intron | 20.0% |
!! | TTTGGATAGAACTATATAAA+AGG | - | chr7_1:65948854-65948873 | Msa1031350:intron | 20.0% |
!! | TTGGATAGAACTATATAAAA+GGG | - | chr7_1:65948855-65948874 | Msa1031350:intron | 20.0% |
!! | TTTAGAGAAGAGAAAAAATA+TGG | + | chr7_1:65948914-65948933 | None:intergenic | 20.0% |
!!! | AAAAATCTTTTGTCAAAAGA+TGG | - | chr7_1:65947217-65947236 | Msa1031350:intron | 20.0% |
!!! | AAAATCTTTTGTCAAAAGAT+GGG | - | chr7_1:65949136-65949155 | Msa1031350:intron | 20.0% |
!!! | TTTTTAAAAGCTGTAACAAA+CGG | - | chr7_1:65949453-65949472 | Msa1031350:intron | 20.0% |
!! | TTAAAAAAGCTATAACAAAC+CGG | - | chr7_1:65948439-65948458 | Msa1031350:intron | 20.0% |
!! | GATAATGCATAAAATATGTA+AGG | - | chr7_1:65949727-65949746 | Msa1031350:intron | 20.0% |
!!! | AATAACAGACTTTTTTTTAG+TGG | + | chr7_1:65949774-65949793 | None:intergenic | 20.0% |
!!! | TTCTGTTTTCATTCTTAAAA+AGG | - | chr7_1:65949807-65949826 | Msa1031350:intron | 20.0% |
!!! | TACATTAACGCTTAATTTTT+TGG | + | chr7_1:65950538-65950557 | None:intergenic | 20.0% |
!! | TAGTATGATAGAAAATAACA+TGG | - | chr7_1:65950742-65950761 | Msa1031350:intron | 20.0% |
!! | ATAGAAAATAACATGGAAAA+TGG | - | chr7_1:65950749-65950768 | Msa1031350:intron | 20.0% |
!! | TAGAAAATAACATGGAAAAT+GGG | - | chr7_1:65950750-65950769 | Msa1031350:intron | 20.0% |
!! | AAAACAATTTGGTTATAAGA+CGG | + | chr7_1:65951123-65951142 | None:intergenic | 20.0% |
!! | ATATAATGCTCAAAACAATT+TGG | + | chr7_1:65951134-65951153 | None:intergenic | 20.0% |
!! | TGGAGTATAAAGTTATAAAT+AGG | + | chr7_1:65951368-65951387 | None:intergenic | 20.0% |
!! | TAAAGTTTGTGTATTTATAC+AGG | - | chr7_1:65951436-65951455 | Msa1031350:intron | 20.0% |
!! | TATAACAATTAAAATCATGC+TGG | + | chr7_1:65952212-65952231 | None:intergenic | 20.0% |
!!! | AGAAGTCAATTTTAGTTTTA+TGG | - | chr7_1:65952243-65952262 | Msa1031350:intron | 20.0% |
! | GAATGATTCACCTAATTATA+TGG | - | chr7_1:65944405-65944424 | Msa1031350:three_prime_UTR | 25.0% |
! | GAAAAAACAAGATAGAGATT+AGG | + | chr7_1:65944546-65944565 | None:intergenic | 25.0% |
!! | CATTGAGGATCAATTTATTT+TGG | - | chr7_1:65944832-65944851 | Msa1031350:CDS | 25.0% |
! | TATATAAAATGCAAGACTAG+AGG | - | chr7_1:65945055-65945074 | Msa1031350:CDS | 25.0% |
! | TTTACTAACATCAAGCTTTA+GGG | + | chr7_1:65945098-65945117 | None:intergenic | 25.0% |
!!! | TTTCAAATGTTTGGATTAGT+TGG | - | chr7_1:65945173-65945192 | Msa1031350:CDS | 25.0% |
!! | CAACAGTTTTCTTTTATGTA+AGG | - | chr7_1:65945410-65945429 | Msa1031350:intron | 25.0% |
! | AACAATATCATTCATCTCTT+AGG | - | chr7_1:65945557-65945576 | Msa1031350:intron | 25.0% |
! | ATTTCTTCTTAAATGAGGTA+GGG | + | chr7_1:65945746-65945765 | None:intergenic | 25.0% |
! | AATTTCTTCTTAAATGAGGT+AGG | + | chr7_1:65945747-65945766 | None:intergenic | 25.0% |
!! | GCATGATGAATTCATTTTAT+TGG | - | chr7_1:65945771-65945790 | Msa1031350:intron | 25.0% |
!!! | TTATTGGAGTTCTAAGATAA+TGG | - | chr7_1:65945787-65945806 | Msa1031350:intron | 25.0% |
! | AAGTATTAATTGGCTAAACT+AGG | - | chr7_1:65945816-65945835 | Msa1031350:intron | 25.0% |
! | AAAGCTTATTGAATACATTG+AGG | + | chr7_1:65946118-65946137 | None:intergenic | 25.0% |
! | ATTCAATAAGCTTTCTTCAT+AGG | - | chr7_1:65946124-65946143 | Msa1031350:intron | 25.0% |
! | AAAAAGATTAATGAATGGAG+TGG | + | chr7_1:65946173-65946192 | None:intergenic | 25.0% |
!!! | TGGTAGATTTTTTATCTGAT+TGG | + | chr7_1:65946280-65946299 | None:intergenic | 25.0% |
!! | AAGAAAAACAACGATTTTGA+AGG | + | chr7_1:65946379-65946398 | None:intergenic | 25.0% |
!!! | CATGTTTTTGTTTATTTCGT+CGG | - | chr7_1:65946428-65946447 | Msa1031350:intron | 25.0% |
!!! | ACTGAAGTTGATATTTCAAT+AGG | - | chr7_1:65946586-65946605 | Msa1031350:intron | 25.0% |
!!! | CTGAAGTTGATATTTCAATA+GGG | - | chr7_1:65946587-65946606 | Msa1031350:intron | 25.0% |
! | TTCAAATGAGAAGCTATTAA+GGG | - | chr7_1:65947428-65947447 | Msa1031350:intron | 25.0% |
!!! | TTATTTTAGTCTGTGACAAA+CGG | + | chr7_1:65947455-65947474 | None:intergenic | 25.0% |
!!! | TTATTTTAATCCGTAACCAA+CGG | + | chr7_1:65947648-65947667 | None:intergenic | 25.0% |
!!! | TTATTTTAATCCGTAACAGA+CGG | - | chr7_1:65948085-65948104 | Msa1031350:intron | 25.0% |
!! | TTTCTAATTGAGAGTTTGTT+TGG | + | chr7_1:65949118-65949137 | None:intergenic | 25.0% |
! | GTTCTTCTAATATCTGATTA+GGG | + | chr7_1:65949919-65949938 | None:intergenic | 25.0% |
! | ATTCTTAATCACATCTATCT+CGG | - | chr7_1:65950077-65950096 | Msa1031350:intron | 25.0% |
!!! | TCCTGTTGATTTAATTTTGA+AGG | - | chr7_1:65950118-65950137 | Msa1031350:intron | 25.0% |
! | ACCTTCAAAATTAAATCAAC+AGG | + | chr7_1:65950122-65950141 | None:intergenic | 25.0% |
!! | AACTCTAACTTTAAGTTCAT+GGG | - | chr7_1:65950285-65950304 | Msa1031350:intron | 25.0% |
! | AATCTAACACCCAAAAAAAT+GGG | + | chr7_1:65950337-65950356 | None:intergenic | 25.0% |
! | AAATCTAACACCCAAAAAAA+TGG | + | chr7_1:65950338-65950357 | None:intergenic | 25.0% |
! | TAATGTATGCTTTAATTGGT+TGG | - | chr7_1:65950551-65950570 | Msa1031350:intron | 25.0% |
! | TATGTATAGACATTAACACA+CGG | + | chr7_1:65950647-65950666 | None:intergenic | 25.0% |
!! | GTTTTATCTTCTTACTTGAA+AGG | - | chr7_1:65950874-65950893 | Msa1031350:intron | 25.0% |
! | ATTCCATCATTAACCATATT+TGG | + | chr7_1:65950989-65951008 | None:intergenic | 25.0% |
! | ATATGTTTAACAGTAAGTAC+AGG | - | chr7_1:65951150-65951169 | Msa1031350:intron | 25.0% |
! | TCTTTCTAACATAACATAAG+AGG | - | chr7_1:65951233-65951252 | Msa1031350:intron | 25.0% |
! | TCTTTCTTAACATAACATAG+AGG | - | chr7_1:65951275-65951294 | Msa1031350:intron | 25.0% |
! | AAGTAGCAAAGATATGATTA+TGG | - | chr7_1:65951314-65951333 | Msa1031350:intron | 25.0% |
! | CAAAGATATGATTATGGATT+AGG | - | chr7_1:65951320-65951339 | Msa1031350:intron | 25.0% |
!! | TTGTGTATTTATACAGGTTT+TGG | - | chr7_1:65951442-65951461 | Msa1031350:intron | 25.0% |
!! | CAAATTTGTTCTGATACTAA+TGG | + | chr7_1:65952004-65952023 | None:intergenic | 25.0% |
!! | ATATTTTATTCCATTCTCCT+AGG | - | chr7_1:65952182-65952201 | Msa1031350:intron | 25.0% |
!! | TATTTTATTCCATTCTCCTA+GGG | - | chr7_1:65952183-65952202 | Msa1031350:intron | 25.0% |
ATTCACCTAATTATATGGGT+TGG | - | chr7_1:65944410-65944429 | Msa1031350:three_prime_UTR | 30.0% | |
ATGATCCAACCCATATAATT+AGG | + | chr7_1:65944418-65944437 | None:intergenic | 30.0% | |
! | TAGTATTTTACTCTTTGCCT+CGG | - | chr7_1:65944514-65944533 | Msa1031350:three_prime_UTR | 30.0% |
TTAGCACAAACAATAAGAAC+GGG | + | chr7_1:65944597-65944616 | None:intergenic | 30.0% | |
GTTAGCACAAACAATAAGAA+CGG | + | chr7_1:65944598-65944617 | None:intergenic | 30.0% | |
GGGGATTGTTTCATATAATA+TGG | - | chr7_1:65944636-65944655 | Msa1031350:CDS | 30.0% | |
TTAGAGTCAAGTGATTAGTA+GGG | + | chr7_1:65944750-65944769 | None:intergenic | 30.0% | |
ATTAGAGTCAAGTGATTAGT+AGG | + | chr7_1:65944751-65944770 | None:intergenic | 30.0% | |
TACTAATCACTTGACTCTAA+TGG | - | chr7_1:65944750-65944769 | Msa1031350:CDS | 30.0% | |
! | AAGGCATTAAAACAATGAGA+GGG | + | chr7_1:65944783-65944802 | None:intergenic | 30.0% |
CTTTACTAACATCAAGCTTT+AGG | + | chr7_1:65945099-65945118 | None:intergenic | 30.0% | |
AGTAACCAGAATATTCATGA+GGG | + | chr7_1:65945457-65945476 | None:intergenic | 30.0% | |
AAGTAACCAGAATATTCATG+AGG | + | chr7_1:65945458-65945477 | None:intergenic | 30.0% | |
GTTACTTATGATACTTCTAG+TGG | - | chr7_1:65945471-65945490 | Msa1031350:intron | 30.0% | |
AGAGATGAATGATATTGTTC+TGG | + | chr7_1:65945556-65945575 | None:intergenic | 30.0% | |
!! | CTTTTATCAAAGAGCGTATA+TGG | - | chr7_1:65945659-65945678 | Msa1031350:intron | 30.0% |
GCTCAATTTCTTCTTAAATG+AGG | + | chr7_1:65945751-65945770 | None:intergenic | 30.0% | |
!! | ATGGTGGTAGAAGTATTAAT+TGG | - | chr7_1:65945806-65945825 | Msa1031350:intron | 30.0% |
GGTGATCAGATGAAAAATTT+AGG | + | chr7_1:65946097-65946116 | None:intergenic | 30.0% | |
AATTCGCAAGAAAATGAGAA+TGG | + | chr7_1:65946300-65946319 | None:intergenic | 30.0% | |
TGTAAAATTACGTCGTTTGA+TGG | + | chr7_1:65946328-65946347 | None:intergenic | 30.0% | |
TGATTGAAAGAAAGGGAAAA+AGG | - | chr7_1:65946745-65946764 | Msa1031350:CDS | 30.0% | |
AGAGAATGTGAAATTTCTCT+CGG | - | chr7_1:65946829-65946848 | Msa1031350:intron | 30.0% | |
!!! | CGTTAGTTATACCTTTTTTG+AGG | - | chr7_1:65947270-65947289 | Msa1031350:intron | 30.0% |
CTTCAAATGAGAAGCTATTA+AGG | - | chr7_1:65947427-65947446 | Msa1031350:intron | 30.0% | |
!!! | TATTTTAGTCTGTGACAAAC+GGG | + | chr7_1:65947454-65947473 | None:intergenic | 30.0% |
!!! | TATTTTAATCCGTAACAGAC+GGG | - | chr7_1:65948086-65948105 | Msa1031350:intron | 30.0% |
TTTAGAGGAGAGTGAAAATA+TGG | + | chr7_1:65948486-65948505 | None:intergenic | 30.0% | |
AAAAGATGGGAAAAAAACCA+AGG | - | chr7_1:65949149-65949168 | Msa1031350:intron | 30.0% | |
AAAGATGGGAAAAAAACCAA+GGG | - | chr7_1:65949150-65949169 | Msa1031350:intron | 30.0% | |
TTTAGAGGAGAGAGAAAATA+TGG | + | chr7_1:65947880-65947899 | None:intergenic | 30.0% | |
TGCATAAAATATGTAAGGTC+CGG | - | chr7_1:65949732-65949751 | Msa1031350:intron | 30.0% | |
GGTTCTTCTAATATCTGATT+AGG | + | chr7_1:65949920-65949939 | None:intergenic | 30.0% | |
AAACATAGTAGATCTGAGAA+GGG | + | chr7_1:65950051-65950070 | None:intergenic | 30.0% | |
AGGTATTTGTGCATTACTTT+AGG | - | chr7_1:65950138-65950157 | Msa1031350:intron | 30.0% | |
GAACTTAAAGTTAGAGTTCA+TGG | + | chr7_1:65950283-65950302 | None:intergenic | 30.0% | |
! | GAACTCTAACTTTAAGTTCA+TGG | - | chr7_1:65950284-65950303 | Msa1031350:intron | 30.0% |
! | ACTCTAACTTTAAGTTCATG+GGG | - | chr7_1:65950286-65950305 | Msa1031350:intron | 30.0% |
GGTTTGAATTTCACGATTAT+TGG | - | chr7_1:65950464-65950483 | Msa1031350:intron | 30.0% | |
GCGTTAATGTATGCTTTAAT+TGG | - | chr7_1:65950547-65950566 | Msa1031350:intron | 30.0% | |
ATGTATAGACATTAACACAC+GGG | + | chr7_1:65950646-65950665 | None:intergenic | 30.0% | |
!! | AAACTCTGAGATTAATGAGT+TGG | - | chr7_1:65950961-65950980 | Msa1031350:intron | 30.0% |
! | TAATGAGTTGGATCCAAATA+TGG | - | chr7_1:65950973-65950992 | Msa1031350:intron | 30.0% |
GATCCAAATATGGTTAATGA+TGG | - | chr7_1:65950983-65951002 | Msa1031350:intron | 30.0% | |
! | ATGGTTAATGATGGAATGTT+AGG | - | chr7_1:65950992-65951011 | Msa1031350:intron | 30.0% |
! | TGGTTAATGATGGAATGTTA+GGG | - | chr7_1:65950993-65951012 | Msa1031350:intron | 30.0% |
GAATACTCAATTTGTGAACT+CGG | - | chr7_1:65951084-65951103 | Msa1031350:intron | 30.0% | |
AAAAGAACAAACAGCAAACT+CGG | + | chr7_1:65951177-65951196 | None:intergenic | 30.0% | |
!!! | AGTTTGCTGTTTGTTCTTTT+TGG | - | chr7_1:65951177-65951196 | Msa1031350:intron | 30.0% |
! | AGATTTTTCTTTACCATCCA+TGG | - | chr7_1:65951513-65951532 | Msa1031350:intron | 30.0% |
! | TCTCTCTTCAAGTTTAAATC+CGG | - | chr7_1:65951799-65951818 | Msa1031350:intron | 30.0% |
AACAAATTTGCAGAAGTTCT+TGG | - | chr7_1:65952014-65952033 | Msa1031350:intron | 30.0% | |
ACAAATTTGCAGAAGTTCTT+GGG | - | chr7_1:65952015-65952034 | Msa1031350:intron | 30.0% | |
!!! | CATTTTATCTCGCTATTTCT+AGG | - | chr7_1:65952122-65952141 | Msa1031350:intron | 30.0% |
!! | TTTCTAGGTTGATGTTAATC+TGG | - | chr7_1:65952137-65952156 | Msa1031350:intron | 30.0% |
AACAAACTAAGCACTACGAT+TGG | + | chr7_1:65944490-65944509 | None:intergenic | 35.0% | |
! | CAAGGCATTAAAACAATGAG+AGG | + | chr7_1:65944784-65944803 | None:intergenic | 35.0% |
GTTTGCAAAGTCAAACATTG+AGG | - | chr7_1:65944817-65944836 | Msa1031350:CDS | 35.0% | |
TCTCAAAAGTCCTTGTCATT+CGG | - | chr7_1:65944930-65944949 | Msa1031350:CDS | 35.0% | |
TGTTAGTAAAGCCTTTGACA+AGG | - | chr7_1:65945108-65945127 | Msa1031350:CDS | 35.0% | |
TAAGTGGAGTTATCTACAAG+CGG | - | chr7_1:65945132-65945151 | Msa1031350:CDS | 35.0% | |
TATGAGCACGATAAGTATCT+TGG | - | chr7_1:65945592-65945611 | Msa1031350:intron | 35.0% | |
! | GAGATTGAGCATTCCAATTT+TGG | + | chr7_1:65945693-65945712 | None:intergenic | 35.0% |
!! | TTGGAGTTCTAAGATAATGG+TGG | - | chr7_1:65945790-65945809 | Msa1031350:intron | 35.0% |
! | TTAAGTTGTGCAATCTAGCA+TGG | + | chr7_1:65945908-65945927 | None:intergenic | 35.0% |
! | TCGACCATTATACGTTTTAC+TGG | - | chr7_1:65946017-65946036 | Msa1031350:intron | 35.0% |
AAGATTAATGAATGGAGTGG+AGG | + | chr7_1:65946170-65946189 | None:intergenic | 35.0% | |
TGTTGACCTGAAAAACTTGT+AGG | + | chr7_1:65946216-65946235 | None:intergenic | 35.0% | |
!! | GTTTTTGTTTATTTCGTCGG+CGG | - | chr7_1:65946431-65946450 | Msa1031350:intron | 35.0% |
!! | CGTGCTTTTGTTTATTTCGT+CGG | - | chr7_1:65946515-65946534 | Msa1031350:intron | 35.0% |
!! | TTTGATTTCGCAACTTGTTG+CGG | + | chr7_1:65946624-65946643 | None:intergenic | 35.0% |
ATGACTAATCAGAGCTATCT+AGG | + | chr7_1:65946874-65946893 | None:intergenic | 35.0% | |
TACAAGAAGCAATGATGCAT+GGG | + | chr7_1:65946952-65946971 | None:intergenic | 35.0% | |
!!! | TGAAGCTAGTTAGTTTTGTG+TGG | + | chr7_1:65949557-65949576 | None:intergenic | 35.0% |
ATATCAAAGCTAAGTTCACG+AGG | + | chr7_1:65949706-65949725 | None:intergenic | 35.0% | |
!!! | GACTTTTTTTTAGTGGTGAC+CGG | + | chr7_1:65949767-65949786 | None:intergenic | 35.0% |
GAAACATAGTAGATCTGAGA+AGG | + | chr7_1:65950052-65950071 | None:intergenic | 35.0% | |
AATCACATCTATCTCGGATT+TGG | - | chr7_1:65950083-65950102 | Msa1031350:intron | 35.0% | |
! | GTACTGTCATCGATTACTTT+AGG | - | chr7_1:65950182-65950201 | Msa1031350:intron | 35.0% |
GCTTGTGACAAAACTTATGA+CGG | + | chr7_1:65950261-65950280 | None:intergenic | 35.0% | |
TAACACCCAAAAAAATGGGA+GGG | + | chr7_1:65950333-65950352 | None:intergenic | 35.0% | |
CTGAAGTAAGATGAAGTAAG+AGG | - | chr7_1:65950422-65950441 | Msa1031350:intron | 35.0% | |
TTTCACGATTATTGGCATGT+TGG | - | chr7_1:65950472-65950491 | Msa1031350:intron | 35.0% | |
TGTATAGACATTAACACACG+GGG | + | chr7_1:65950645-65950664 | None:intergenic | 35.0% | |
!! | AGTCCACTAAGAAAGTACTT+TGG | - | chr7_1:65950670-65950689 | Msa1031350:intron | 35.0% |
AGAAACAAAGACAGCAAACT+TGG | + | chr7_1:65951493-65951512 | None:intergenic | 35.0% | |
GAGTACTTGAAATCTGAGAA+GGG | + | chr7_1:65951544-65951563 | None:intergenic | 35.0% | |
! | CTTCTCAGATTTCAAGTACT+CGG | - | chr7_1:65951543-65951562 | Msa1031350:intron | 35.0% |
GTAAATAAGAACCCATGAGA+TGG | + | chr7_1:65951620-65951639 | None:intergenic | 35.0% | |
!!! | CTCAACACGGTCAATTTTTT+TGG | + | chr7_1:65951749-65951768 | None:intergenic | 35.0% |
TGGTTCTCTTTGTGGTATTT+GGG | - | chr7_1:65951836-65951855 | Msa1031350:intron | 35.0% | |
AAAAGGCTTGAATGGCAATT+TGG | + | chr7_1:65951896-65951915 | None:intergenic | 35.0% | |
! | AAATTGCCATTCAAGCCTTT+TGG | - | chr7_1:65951895-65951914 | Msa1031350:intron | 35.0% |
! | AATTGCCATTCAAGCCTTTT+GGG | - | chr7_1:65951896-65951915 | Msa1031350:intron | 35.0% |
ATCTTCATAACAAGCCCAAA+AGG | + | chr7_1:65951913-65951932 | None:intergenic | 35.0% | |
TTCTGATACTAATGGAACAC+AGG | + | chr7_1:65951996-65952015 | None:intergenic | 35.0% | |
!! | AACTAGATCAACTGGTCTTT+GGG | + | chr7_1:65952089-65952108 | None:intergenic | 35.0% |
CATAACAGAACTAGATCAAC+TGG | + | chr7_1:65952097-65952116 | None:intergenic | 35.0% | |
AATGTTGTTGACGAGGAAGA+AGG | - | chr7_1:65944374-65944393 | Msa1031350:three_prime_UTR | 40.0% | |
! | ATTTTACTCTTTGCCTCGGT+TGG | - | chr7_1:65944518-65944537 | Msa1031350:three_prime_UTR | 40.0% |
AACCTCTTGTCTCTATGGAT+AGG | - | chr7_1:65944615-65944634 | Msa1031350:exon | 40.0% | |
ACCTCTTGTCTCTATGGATA+GGG | - | chr7_1:65944616-65944635 | Msa1031350:CDS | 40.0% | |
TGACTTTGCAAACAATGCGA+GGG | + | chr7_1:65944810-65944829 | None:intergenic | 40.0% | |
TTGACTTTGCAAACAATGCG+AGG | + | chr7_1:65944811-65944830 | None:intergenic | 40.0% | |
TTTGTTTGAGCCGAATGACA+AGG | + | chr7_1:65944943-65944962 | None:intergenic | 40.0% | |
AATCAGAGATGCACTTATGG+AGG | + | chr7_1:65944967-65944986 | None:intergenic | 40.0% | |
GTGAATCAGAGATGCACTTA+TGG | + | chr7_1:65944970-65944989 | None:intergenic | 40.0% | |
!!! | ATGCCACTTTTGTCTCTAGT+AGG | - | chr7_1:65944990-65945009 | Msa1031350:CDS | 40.0% |
!!! | TGCCACTTTTGTCTCTAGTA+GGG | - | chr7_1:65944991-65945010 | Msa1031350:CDS | 40.0% |
TGCAAGACTAGAGGTAAAGA+AGG | - | chr7_1:65945064-65945083 | Msa1031350:CDS | 40.0% | |
AAGCCTTTGACAAGGTTAAG+TGG | - | chr7_1:65945116-65945135 | Msa1031350:CDS | 40.0% | |
ACTCCACTTAACCTTGTCAA+AGG | + | chr7_1:65945122-65945141 | None:intergenic | 40.0% | |
!! | CAAGCGGTGATGGAAAAAAT+AGG | - | chr7_1:65945148-65945167 | Msa1031350:CDS | 40.0% |
! | GGGGGTTAAGTTTTTACATC+AGG | - | chr7_1:65945307-65945326 | Msa1031350:intron | 40.0% |
GGATAAGCACGATATTGTCA+TGG | + | chr7_1:65945335-65945354 | None:intergenic | 40.0% | |
GACAATATCGTGCTTATCCA+CGG | - | chr7_1:65945336-65945355 | Msa1031350:intron | 40.0% | |
! | GAAAACTGTTGTTTGCGAAG+AGG | + | chr7_1:65945401-65945420 | None:intergenic | 40.0% |
! | ATTCATGAGGGTTGTCACTT+CGG | + | chr7_1:65945445-65945464 | None:intergenic | 40.0% |
GACAACCCTCATGAATATTC+TGG | - | chr7_1:65945449-65945468 | Msa1031350:intron | 40.0% | |
AAATCCTCCACACTTTCAGT+CGG | - | chr7_1:65945513-65945532 | Msa1031350:intron | 40.0% | |
TTGTATTCCGACTGAAAGTG+TGG | + | chr7_1:65945523-65945542 | None:intergenic | 40.0% | |
! | CATTCATCTCTTAGGTGTTG+TGG | - | chr7_1:65945565-65945584 | Msa1031350:intron | 40.0% |
TGTCTCTTCCTACCATAGAT+GGG | + | chr7_1:65945621-65945640 | None:intergenic | 40.0% | |
TTGTCTCTTCCTACCATAGA+TGG | + | chr7_1:65945622-65945641 | None:intergenic | 40.0% | |
GGATAAGATGACTGCTTGTA+AGG | - | chr7_1:65945837-65945856 | Msa1031350:intron | 40.0% | |
ATGACTGCTTGTAAGGATCA+CGG | - | chr7_1:65945844-65945863 | Msa1031350:intron | 40.0% | |
GCAGCCAGTAAAACGTATAA+TGG | + | chr7_1:65946024-65946043 | None:intergenic | 40.0% | |
!! | TATACGTTTTACTGGCTGCA+AGG | - | chr7_1:65946025-65946044 | Msa1031350:intron | 40.0% |
GAAAAACTTGTAGGCAGACA+TGG | + | chr7_1:65946207-65946226 | None:intergenic | 40.0% | |
! | TGTCTGCCTACAAGTTTTTC+AGG | - | chr7_1:65946207-65946226 | Msa1031350:intron | 40.0% |
AACTAATCACCTCACACTCT+AGG | - | chr7_1:65946252-65946271 | Msa1031350:intron | 40.0% | |
!! | ATTTTCTGGCAAGATGACGT+CGG | - | chr7_1:65946458-65946477 | Msa1031350:intron | 40.0% |
AAGGGAAAAAGGATGCAGAT+AGG | - | chr7_1:65946756-65946775 | Msa1031350:CDS | 40.0% | |
GGATGCAGATAGGTGATTAT+AGG | - | chr7_1:65946766-65946785 | Msa1031350:CDS | 40.0% | |
!!! | CATGGGTTTTAGAGATTCCA+AGG | + | chr7_1:65946935-65946954 | None:intergenic | 40.0% |
GTACAAGAAGCAATGATGCA+TGG | + | chr7_1:65946953-65946972 | None:intergenic | 40.0% | |
GTTACAAAATTAGGGTCCGT+TGG | - | chr7_1:65947629-65947648 | Msa1031350:intron | 40.0% | |
! | AAATTAGGGTCCGTTGGTTA+CGG | - | chr7_1:65947635-65947654 | Msa1031350:intron | 40.0% |
GCTTCAAATGAGAAGCTGTT+AGG | - | chr7_1:65947831-65947850 | Msa1031350:intron | 40.0% | |
GCTTCAAATGAGAAGCTGTT+AGG | + | chr7_1:65947831-65947850 | None:intergenic | 40.0% | |
! | CATAAAGGGTCCGTTTGTTA+CGG | + | chr7_1:65948763-65948782 | None:intergenic | 40.0% |
!!! | TAGTTTTGTGTGGTTAGAGC+CGG | + | chr7_1:65949547-65949566 | None:intergenic | 40.0% |
ATTCAGATTCACTCACTCTC+TGG | - | chr7_1:65949873-65949892 | Msa1031350:intron | 40.0% | |
AGAGAAAGAGTTGACGAAGA+CGG | + | chr7_1:65949954-65949973 | None:intergenic | 40.0% | |
! | GATCTGTTGCTGCTGAATTT+TGG | - | chr7_1:65950160-65950179 | Msa1031350:intron | 40.0% |
AACACCCAAAAAAATGGGAG+GGG | + | chr7_1:65950332-65950351 | None:intergenic | 40.0% | |
CTAACACCCAAAAAAATGGG+AGG | + | chr7_1:65950334-65950353 | None:intergenic | 40.0% | |
GGCTGAAGATGTAGATTTCT+TGG | - | chr7_1:65950443-65950462 | Msa1031350:intron | 40.0% | |
! | GCTCCAAAGTACTTTCTTAG+TGG | + | chr7_1:65950676-65950695 | None:intergenic | 40.0% |
ATTTGTGAACTCGGTTACCT+TGG | - | chr7_1:65951093-65951112 | Msa1031350:intron | 40.0% | |
GGTTATAAGACGGTAAACCA+AGG | + | chr7_1:65951113-65951132 | None:intergenic | 40.0% | |
CGAGTACTTGAAATCTGAGA+AGG | + | chr7_1:65951545-65951564 | None:intergenic | 40.0% | |
! | TCAGATTTCAAGTACTCGGA+TGG | - | chr7_1:65951547-65951566 | Msa1031350:intron | 40.0% |
GGTTCTTGTAAGAATTGGTG+CGG | + | chr7_1:65951642-65951661 | None:intergenic | 40.0% | |
GCGAAGGTTCTTGTAAGAAT+TGG | + | chr7_1:65951647-65951666 | None:intergenic | 40.0% | |
CTTCATAGTCTCGAGTTTCT+TGG | + | chr7_1:65951689-65951708 | None:intergenic | 40.0% | |
AGTCACGACTAGATTCTTTG+AGG | + | chr7_1:65951777-65951796 | None:intergenic | 40.0% | |
! | CTCTTCAAGTTTAAATCCGG+TGG | - | chr7_1:65951802-65951821 | Msa1031350:intron | 40.0% |
! | CTGGTTCTCTTTGTGGTATT+TGG | - | chr7_1:65951835-65951854 | Msa1031350:intron | 40.0% |
CTGCTCAATTCGCTATTTGA+AGG | - | chr7_1:65951859-65951878 | Msa1031350:intron | 40.0% | |
CAATTCGCTATTTGAAGGCA+AGG | - | chr7_1:65951864-65951883 | Msa1031350:intron | 40.0% | |
TTATGAAGATGAGCCATCGA+GGG | - | chr7_1:65951923-65951942 | Msa1031350:intron | 40.0% | |
AATGCCATGGAACAATCAGT+GGG | + | chr7_1:65951964-65951983 | None:intergenic | 40.0% | |
AAATGCCATGGAACAATCAG+TGG | + | chr7_1:65951965-65951984 | None:intergenic | 40.0% | |
! | CAGGAAGTATAGAAATGCCA+TGG | + | chr7_1:65951977-65951996 | None:intergenic | 40.0% |
!! | GAACTAGATCAACTGGTCTT+TGG | + | chr7_1:65952090-65952109 | None:intergenic | 40.0% |
GAAGAAACTCTCCTATGGTA+CGG | + | chr7_1:65952316-65952335 | None:intergenic | 40.0% | |
AAAGCGAAGAAACTCTCCTA+TGG | + | chr7_1:65952321-65952340 | None:intergenic | 40.0% | |
ATAGGAGAGTTTCTTCGCTT+TGG | - | chr7_1:65952320-65952339 | Msa1031350:intron | 40.0% | |
! | GGTGTTGAATGTTGTTGACG+AGG | - | chr7_1:65944367-65944386 | Msa1031350:three_prime_UTR | 45.0% |
TAGAGATTAGGTTCCAACCG+AGG | + | chr7_1:65944534-65944553 | None:intergenic | 45.0% | |
GTGCTAACCTCTTGTCTCTA+TGG | - | chr7_1:65944610-65944629 | Msa1031350:exon | 45.0% | |
CCTCTTGTCTCTATGGATAG+GGG | - | chr7_1:65944617-65944636 | Msa1031350:CDS | 45.0% | |
CAAACAATGCGAGGGAATCA+AGG | + | chr7_1:65944802-65944821 | None:intergenic | 45.0% | |
GTCCCTACTAGAGACAAAAG+TGG | + | chr7_1:65944996-65945015 | None:intergenic | 45.0% | |
GAGTTATCTACAAGCGGTGA+TGG | - | chr7_1:65945138-65945157 | Msa1031350:CDS | 45.0% | |
CTTGTCATCAACGATCGTGT+AGG | - | chr7_1:65945232-65945251 | Msa1031350:CDS | 45.0% | |
! | AGACCACAAAGAGGTGCAAT+AGG | + | chr7_1:65945259-65945278 | None:intergenic | 45.0% |
CCTCTTTGTGGTCTTTAACG+CGG | - | chr7_1:65945265-65945284 | Msa1031350:intron | 45.0% | |
CTCTTTGTGGTCTTTAACGC+GGG | - | chr7_1:65945266-65945285 | Msa1031350:intron | 45.0% | |
TCTTTGTGGTCTTTAACGCG+GGG | - | chr7_1:65945267-65945286 | Msa1031350:intron | 45.0% | |
AAGAGGAGATGGGTAATCGA+TGG | + | chr7_1:65945384-65945403 | None:intergenic | 45.0% | |
GTTGTTTGCGAAGAGGAGAT+GGG | + | chr7_1:65945394-65945413 | None:intergenic | 45.0% | |
! | TGTTGTTTGCGAAGAGGAGA+TGG | + | chr7_1:65945395-65945414 | None:intergenic | 45.0% |
! | TATTCCGACTGAAAGTGTGG+AGG | + | chr7_1:65945520-65945539 | None:intergenic | 45.0% |
TGGCAAGGTTAAAACCTTCG+TGG | + | chr7_1:65945888-65945907 | None:intergenic | 45.0% | |
TTGTGCAATCTAGCATGGCA+AGG | + | chr7_1:65945903-65945922 | None:intergenic | 45.0% | |
TGATTGGATCCTAGAGTGTG+AGG | + | chr7_1:65946264-65946283 | None:intergenic | 45.0% | |
!! | TTTTCTGGCAAGATGACGTC+GGG | - | chr7_1:65946459-65946478 | Msa1031350:intron | 45.0% |
CTCTTTCACTCATCGACGAT+GGG | + | chr7_1:65946813-65946832 | None:intergenic | 45.0% | |
TCTCTTTCACTCATCGACGA+TGG | + | chr7_1:65946814-65946833 | None:intergenic | 45.0% | |
!!! | AACGAGCTCTTAGTTTTGCG+TGG | + | chr7_1:65947254-65947273 | None:intergenic | 45.0% |
AATATAGGGCCCGTCTGTTA+CGG | + | chr7_1:65948098-65948117 | None:intergenic | 45.0% | |
GAAGCTGTTAAGAGCAGCTT+CGG | + | chr7_1:65948525-65948544 | None:intergenic | 45.0% | |
! | AACCAAGGGCTCGTTTGTTA+CGG | - | chr7_1:65949164-65949183 | Msa1031350:intron | 45.0% |
TGAGAAGGGTGAATACCTTG+AGG | + | chr7_1:65950037-65950056 | None:intergenic | 45.0% | |
!!! | AACCCCCCTCCCATTTTTTT+GGG | - | chr7_1:65950325-65950344 | Msa1031350:intron | 45.0% |
ACACCCAAAAAAATGGGAGG+GGG | + | chr7_1:65950331-65950350 | None:intergenic | 45.0% | |
!! | TGTTGACTTGCTAGATGCCA+TGG | - | chr7_1:65950603-65950622 | Msa1031350:intron | 45.0% |
! | GAAAGATTCTTGGTGTGCCA+TGG | + | chr7_1:65950623-65950642 | None:intergenic | 45.0% |
AACACACGGGGAAAGATTCT+TGG | + | chr7_1:65950633-65950652 | None:intergenic | 45.0% | |
CTTATCCCACTAAGTGAGGT+CGG | + | chr7_1:65951038-65951057 | None:intergenic | 45.0% | |
! | AAGCCTTATCCCACTAAGTG+AGG | + | chr7_1:65951042-65951061 | None:intergenic | 45.0% |
TCACTTAGTGGGATAAGGCT+TGG | - | chr7_1:65951041-65951060 | Msa1031350:intron | 45.0% | |
! | TTAGTGGGATAAGGCTTGGT+TGG | - | chr7_1:65951045-65951064 | Msa1031350:intron | 45.0% |
ATCTGAGAAGGGATATGCCA+TGG | + | chr7_1:65951533-65951552 | None:intergenic | 45.0% | |
AAGAGATACCCACAACAGTG+AGG | + | chr7_1:65951573-65951592 | None:intergenic | 45.0% | |
CTGTACAGCTATTGTCTGTG+AGG | - | chr7_1:65951594-65951613 | Msa1031350:intron | 45.0% | |
! | CTTGGAAGCTTTGTCGATAG+AGG | + | chr7_1:65951671-65951690 | None:intergenic | 45.0% |
!! | CTTTGAGGCTAGTCTCAACA+CGG | + | chr7_1:65951762-65951781 | None:intergenic | 45.0% |
CAAGTTTAAATCCGGTGGTG+TGG | - | chr7_1:65951807-65951826 | Msa1031350:intron | 45.0% | |
ACAAGCCCAAAAGGCTTGAA+TGG | + | chr7_1:65951904-65951923 | None:intergenic | 45.0% | |
GTTATGAAGATGAGCCATCG+AGG | - | chr7_1:65951922-65951941 | Msa1031350:intron | 45.0% | |
! | TGATCCCACTGATTGTTCCA+TGG | - | chr7_1:65951957-65951976 | Msa1031350:intron | 45.0% |
! | AAAATCATGCTGGTCTCCCT+AGG | + | chr7_1:65952202-65952221 | None:intergenic | 45.0% |
TTGCTTGTCTACCGTACCAT+AGG | - | chr7_1:65952302-65952321 | Msa1031350:intron | 45.0% | |
!!! | CTTTTTTTTTTTTTTTTTAA+AGG | - | chr7_1:65944464-65944483 | Msa1031350:three_prime_UTR | 5.0% |
!!! | AAAAAAATTGATTTTTTTTA+CGG | + | chr7_1:65948165-65948184 | None:intergenic | 5.0% |
!!! | AAAAAAAATATTAATTTTAG+AGG | + | chr7_1:65948501-65948520 | None:intergenic | 5.0% |
CCCCTATCCATAGAGACAAG+AGG | + | chr7_1:65944620-65944639 | None:intergenic | 50.0% | |
GGACCTATTGCACCTCTTTG+TGG | - | chr7_1:65945253-65945272 | Msa1031350:intron | 50.0% | |
CCGCGTTAAAGACCACAAAG+AGG | + | chr7_1:65945268-65945287 | None:intergenic | 50.0% | |
CTTTGTGGTCTTTAACGCGG+GGG | - | chr7_1:65945268-65945287 | Msa1031350:intron | 50.0% | |
TTTGTGGTCTTTAACGCGGG+GGG | - | chr7_1:65945269-65945288 | Msa1031350:intron | 50.0% | |
GTATCTTGGCCTCCCATCTA+TGG | - | chr7_1:65945606-65945625 | Msa1031350:intron | 50.0% | |
CTCTTCCTACCATAGATGGG+AGG | + | chr7_1:65945618-65945637 | None:intergenic | 50.0% | |
ACTGCTTGTAAGGATCACGG+TGG | - | chr7_1:65945847-65945866 | Msa1031350:intron | 50.0% | |
CTCAACTTTCGTGACCACGA+AGG | - | chr7_1:65945871-65945890 | Msa1031350:intron | 50.0% | |
! | TCGTCGGCGGAAAGATTTTC+TGG | - | chr7_1:65946444-65946463 | Msa1031350:intron | 50.0% |
! | TTTCTGGCAAGATGACGTCG+GGG | - | chr7_1:65946460-65946479 | Msa1031350:intron | 50.0% |
GTGATTTCGTCGTCTGAGTG+CGG | + | chr7_1:65946682-65946701 | None:intergenic | 50.0% | |
AGATTCCAAGGCTTTCTGCG+AGG | + | chr7_1:65946923-65946942 | None:intergenic | 50.0% | |
ATCCGTAACAAACGAGCCCT+TGG | + | chr7_1:65949169-65949188 | None:intergenic | 50.0% | |
TAAGGTCCGGAGTTCGAATC+CGG | - | chr7_1:65949745-65949764 | Msa1031350:intron | 50.0% | |
!!! | ACGAAGACGGTGATGGGTTT+TGG | + | chr7_1:65949941-65949960 | None:intergenic | 50.0% |
GAGTTGACGAAGACGGTGAT+GGG | + | chr7_1:65949947-65949966 | None:intergenic | 50.0% | |
AGAGTTGACGAAGACGGTGA+TGG | + | chr7_1:65949948-65949967 | None:intergenic | 50.0% | |
CAAGAACGTGAACGAAGCCA+AGG | + | chr7_1:65950009-65950028 | None:intergenic | 50.0% | |
CACGTTCTTGCGATTCCTCA+AGG | - | chr7_1:65950019-65950038 | Msa1031350:intron | 50.0% | |
!!! | GAACCCCCCTCCCATTTTTT+TGG | - | chr7_1:65950324-65950343 | Msa1031350:intron | 50.0% |
CACCCAAAAAAATGGGAGGG+GGG | + | chr7_1:65950330-65950349 | None:intergenic | 50.0% | |
ACTAAGTGAGGTCGGCTACA+TGG | + | chr7_1:65951030-65951049 | None:intergenic | 50.0% | |
ATGTAGCCGACCTCACTTAG+TGG | - | chr7_1:65951029-65951048 | Msa1031350:intron | 50.0% | |
TGTAGCCGACCTCACTTAGT+GGG | - | chr7_1:65951030-65951049 | Msa1031350:intron | 50.0% | |
CGACCTCACTTAGTGGGATA+AGG | - | chr7_1:65951036-65951055 | Msa1031350:intron | 50.0% | |
GAGAAGGGATATGCCATGGA+TGG | + | chr7_1:65951529-65951548 | None:intergenic | 50.0% | |
TTGTCTGTGAGGCCATCTCA+TGG | - | chr7_1:65951605-65951624 | Msa1031350:intron | 50.0% | |
TGTCTGTGAGGCCATCTCAT+GGG | - | chr7_1:65951606-65951625 | Msa1031350:intron | 50.0% | |
CTTTGTCGATAGAGGAGCGA+AGG | + | chr7_1:65951663-65951682 | None:intergenic | 50.0% | |
!! | GGTTGCTCTGGTTCTCTTTG+TGG | - | chr7_1:65951828-65951847 | Msa1031350:intron | 50.0% |
CATTACCTTGCAACCCTCGA+TGG | + | chr7_1:65951939-65951958 | None:intergenic | 50.0% | |
!! | GATCAACTGGTCTTTGGGTC+TGG | + | chr7_1:65952084-65952103 | None:intergenic | 50.0% |
TTGTGGTCTTTAACGCGGGG+GGG | - | chr7_1:65945270-65945289 | Msa1031350:intron | 55.0% | |
TCCACGGTACACGCATCTGT+CGG | - | chr7_1:65945352-65945371 | Msa1031350:intron | 55.0% | |
CTTGGCCTCCCATCTATGGT+AGG | - | chr7_1:65945610-65945629 | Msa1031350:intron | 55.0% | |
ATTTCGTCGTCTGAGTGCGG+CGG | + | chr7_1:65946679-65946698 | None:intergenic | 55.0% | |
AGCAACCTCGCAGAAAGCCT+TGG | - | chr7_1:65946915-65946934 | Msa1031350:intron | 55.0% | |
TGGTGACCGGATTCGAACTC+CGG | + | chr7_1:65949754-65949773 | None:intergenic | 55.0% | |
TCGGATGGCCTCACTGTTGT+GGG | - | chr7_1:65951562-65951581 | Msa1031350:intron | 55.0% | |
AACCAGAGCAACCACACCAC+CGG | + | chr7_1:65951821-65951840 | None:intergenic | 55.0% | |
ATGAGCCATCGAGGGTTGCA+AGG | - | chr7_1:65951931-65951950 | Msa1031350:intron | 55.0% | |
! | TCTTGGGTTTTGCACCGCCA+AGG | - | chr7_1:65952031-65952050 | Msa1031350:intron | 55.0% |
! | CTTGGGTTTTGCACCGCCAA+GGG | - | chr7_1:65952032-65952051 | Msa1031350:intron | 55.0% |
! | TTGGGTTTTGCACCGCCAAG+GGG | - | chr7_1:65952033-65952052 | Msa1031350:intron | 55.0% |
! | CTGGTCTTTGGGTCTGGCAT+TGG | + | chr7_1:65952078-65952097 | None:intergenic | 55.0% |
! | TGCTGGTCTCCCTAGGAGAA+TGG | + | chr7_1:65952195-65952214 | None:intergenic | 55.0% |
TGTGGTCTTTAACGCGGGGG+GGG | - | chr7_1:65945271-65945290 | Msa1031350:intron | 60.0% | |
TCCGACAGATGCGTGTACCG+TGG | + | chr7_1:65945356-65945375 | None:intergenic | 60.0% | |
ACGGTACACGCATCTGTCGG+AGG | - | chr7_1:65945355-65945374 | Msa1031350:intron | 60.0% | |
CTCGGATGGCCTCACTGTTG+TGG | - | chr7_1:65951561-65951580 | Msa1031350:intron | 60.0% | |
ATCCGGTGGTGTGGTTGCTC+TGG | - | chr7_1:65951816-65951835 | Msa1031350:intron | 60.0% | |
GTGGTCTTTAACGCGGGGGG+GGG | - | chr7_1:65945272-65945291 | Msa1031350:intron | 65.0% | |
TGGTCTTTAACGCGGGGGGG+GGG | - | chr7_1:65945273-65945292 | Msa1031350:intron | 65.0% | |
AGCTGTGAACGCACGCGCCT+TGG | - | chr7_1:65949989-65950008 | Msa1031350:intron | 65.0% | |
! | TTTGCACCGCCAAGGGGTGC+AGG | - | chr7_1:65952039-65952058 | Msa1031350:intron | 65.0% |
AGACCAGCACCTGCACCCCT+TGG | + | chr7_1:65952051-65952070 | None:intergenic | 65.0% | |
CTTTGGTCCCCTTCCCCCAG+AGG | - | chr7_1:65952337-65952356 | Msa1031350:intron | 65.0% | |
GGTCTTTAACGCGGGGGGGG+GGG | - | chr7_1:65945274-65945293 | Msa1031350:intron | 70.0% | |
GTCTTTAACGCGGGGGGGGG+GGG | - | chr7_1:65945275-65945294 | Msa1031350:intron | 70.0% | |
TCTTTAACGCGGGGGGGGGG+GGG | - | chr7_1:65945276-65945295 | Msa1031350:intron | 70.0% | |
CCAGCACCTGCACCCCTTGG+CGG | + | chr7_1:65952048-65952067 | None:intergenic | 70.0% | |
CTTTAACGCGGGGGGGGGGG+GGG | - | chr7_1:65945277-65945296 | Msa1031350:intron | 75.0% | |
TTTAACGCGGGGGGGGGGGG+GGG | - | chr7_1:65945278-65945297 | Msa1031350:intron | 75.0% | |
! | CCGCCAAGGGGTGCAGGTGC+TGG | - | chr7_1:65952045-65952064 | Msa1031350:intron | 75.0% |
! | TTAACGCGGGGGGGGGGGGG+GGG | - | chr7_1:65945279-65945298 | Msa1031350:intron | 80.0% |
! | TAACGCGGGGGGGGGGGGGG+GGG | - | chr7_1:65945280-65945299 | Msa1031350:intron | 85.0% |
! | AACGCGGGGGGGGGGGGGGG+GGG | - | chr7_1:65945281-65945300 | Msa1031350:intron | 90.0% |
! | ACGCGGGGGGGGGGGGGGGG+GGG | - | chr7_1:65945282-65945301 | Msa1031350:intron | 95.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7_1 | gene | 65944353 | 65952364 | 65944353 | ID=Msa1031350;Name=Msa1031350 |
chr7_1 | mRNA | 65944353 | 65952364 | 65944353 | ID=Msa1031350-mRNA-1;Parent=Msa1031350;Name=Msa1031350-mRNA-1;_AED=0.14;_eAED=0.14;_QI=0|0.5|0.33|0.66|0.5|0.33|3|263|269 |
chr7_1 | exon | 65944353 | 65945259 | 65944353 | ID=Msa1031350-mRNA-1:exon:14719;Parent=Msa1031350-mRNA-1 |
chr7_1 | exon | 65946677 | 65946838 | 65946677 | ID=Msa1031350-mRNA-1:exon:14718;Parent=Msa1031350-mRNA-1 |
chr7_1 | exon | 65952361 | 65952364 | 65952361 | ID=Msa1031350-mRNA-1:exon:14717;Parent=Msa1031350-mRNA-1 |
chr7_1 | CDS | 65952361 | 65952364 | 65952361 | ID=Msa1031350-mRNA-1:cds;Parent=Msa1031350-mRNA-1 |
chr7_1 | CDS | 65946677 | 65946838 | 65946677 | ID=Msa1031350-mRNA-1:cds;Parent=Msa1031350-mRNA-1 |
chr7_1 | CDS | 65944616 | 65945259 | 65944616 | ID=Msa1031350-mRNA-1:cds;Parent=Msa1031350-mRNA-1 |
chr7_1 | three_prime_UTR | 65944353 | 65944615 | 65944353 | ID=Msa1031350-mRNA-1:three_prime_utr;Parent=Msa1031350-mRNA-1 |
Gene Sequence |
Protein sequence |