AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1053720

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1053720 MtrunA17_Chr7g0232061 100.000 92 0 0 1 92 630 721 3.56e-53 176
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1053720 AT2G45000.1 78.495 93 20 0 1 93 647 739 3.65e-46 157

Find 85 sgRNAs with CRISPR-Local

Find 320 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGTGAGGACGAGTGAAATTT+TGG 0.152215 7_2:+24524388 None:intergenic
CTCCACCCTGGTTTGAATTA+AGG 0.171168 7_2:+24519590 None:intergenic
CGTGATATTTCTGGAGATTT+TGG 0.185559 7_2:-24519008 Msa1053720:exon
TTTGAGGATTGTTAGTATTA+AGG 0.194500 7_2:-24518898 Msa1053720:three_prime_UTR
CAGAGAGTTAGGTTAGGTTT+TGG 0.206474 7_2:+24524218 None:intergenic
GTTGGATGTCGTGATATTTC+TGG 0.238329 7_2:-24519017 Msa1053720:exon
AGAATTGTTGGGGAGTTAAT+AGG 0.270866 7_2:+24518949 None:intergenic
TCCACCCTGGTTTGAATTAA+GGG 0.297780 7_2:+24519591 None:intergenic
AAATGAAATTATAGAATTGT+TGG 0.353531 7_2:+24518937 None:intergenic
TAGCACCGATTCAGAGAGTT+AGG 0.356227 7_2:+24524207 None:intergenic
TTCTTCCTCAACACTTTGTA+AGG 0.366428 7_2:+24520670 None:intergenic
AATGAAATTATAGAATTGTT+GGG 0.394210 7_2:+24518938 None:intergenic
TCTCATGTGGATTGATGAAA+AGG 0.417328 7_2:-24519497 Msa1053720:intron
AGTTGGAATCTGAGCAATAT+TGG 0.422042 7_2:+24523950 None:intergenic
AAACATGTAGTAGCAGTTCA+TGG 0.433461 7_2:-24518720 Msa1053720:three_prime_UTR
GAACTCAAACGGTGCTCAAA+AGG 0.438167 7_2:-24524111 Msa1053720:five_prime_UTR
TGCTTCAGATCGTCAGCTGA+TGG 0.443735 7_2:-24519049 Msa1053720:CDS
CACTCACTCACTCACTCAAT+CGG 0.447216 7_2:-24524133 Msa1053720:five_prime_UTR
ACCCTTGTGTCAGGTTGATA+AGG 0.451427 7_2:-24520693 Msa1053720:intron
CAAGAGTGAGTTTCAGATCT+GGG 0.455259 7_2:+24524484 None:intergenic
AAGAAGGAGTGAGGACGAGT+TGG 0.455360 7_2:+24524321 None:intergenic
CCGATTCAGAGAGTTAGGTT+AGG 0.456593 7_2:+24524212 None:intergenic
AAGGAGTGAGGACGAGTTGG+TGG 0.457779 7_2:+24524324 None:intergenic
ACGTTTGATTCCAACTCAAA+AGG 0.476409 7_2:-24523985 Msa1053720:five_prime_UTR
TCAAGAGTGAGTTTCAGATC+TGG 0.477031 7_2:+24524483 None:intergenic
ACGAGTGAAGAAGGAGAAGA+AGG 0.478810 7_2:+24524417 None:intergenic
AGCAGTCAGAACTGATAGAA+AGG 0.486878 7_2:-24519657 Msa1053720:CDS
CCATTCCCTTAATTCAAACC+AGG 0.488861 7_2:-24519596 Msa1053720:CDS
TGAGATTAAGTGAGTTCCGT+TGG 0.492800 7_2:+24524165 None:intergenic
GTTGGAATCTGAGCAATATT+GGG 0.493329 7_2:+24523951 None:intergenic
CGGTGCTACAATCTCAGAAT+CGG 0.496621 7_2:-24524192 Msa1053720:five_prime_UTR
GCTCAATCTTCTCACTCAAT+CGG 0.498394 7_2:-24524083 Msa1053720:intron
TATCACGACATCCAACTTCC+AGG 0.501195 7_2:+24519024 None:intergenic
GTTGATCTTATTGCTCTGAA+AGG 0.506593 7_2:-24523904 Msa1053720:intron
GATCGTCAGCTGATGGGACC+TGG 0.508643 7_2:-24519042 Msa1053720:CDS
TCTAGTGGAGTCATTCCATC+TGG 0.512873 7_2:+24519556 None:intergenic
GTTTGATAGCTTCTGAATGC+GGG 0.513540 7_2:+24519080 None:intergenic
TCACTCAATCGGAACTCAAA+CGG 0.518611 7_2:-24524122 Msa1053720:five_prime_UTR
AGCAATAAGATCAACGGTGA+TGG 0.521564 7_2:+24523912 None:intergenic
TGCTATAGTGCAACTGTGAA+AGG 0.524063 7_2:-24518680 Msa1053720:three_prime_UTR
CCTAACCTAACTCTCTGAAT+CGG 0.529400 7_2:-24524212 Msa1053720:five_prime_UTR
AGCTGATGGGACCTGGAAGT+TGG 0.530293 7_2:-24519035 Msa1053720:CDS
GCTTCAGATCGTCAGCTGAT+GGG 0.533912 7_2:-24519048 Msa1053720:CDS
AGATCAACGGTGATGGATTG+TGG 0.534246 7_2:+24523919 None:intergenic
GACGATCTGAAGCAGAACCT+TGG 0.534527 7_2:+24519058 None:intergenic
GGAGAGAGTGAGGAGCGAGT+TGG 0.534957 7_2:+24524286 None:intergenic
GTGCTTCAACCTCTCCACCC+TGG 0.536093 7_2:+24519578 None:intergenic
CCTGGTTTGAATTAAGGGAA+TGG 0.539052 7_2:+24519596 None:intergenic
TTAACTATTTGCAAATTCAC+AGG 0.540017 7_2:+24518782 None:intergenic
AAGGAGAAGAAGGAGTAAGA+AGG 0.549957 7_2:+24524427 None:intergenic
GTGAAGGCATAACGAGGAAG+AGG 0.559962 7_2:+24524265 None:intergenic
GTCACTTGAGTGTGAACGAT+TGG 0.565556 7_2:+24524449 None:intergenic
GCAGTCAGAACTGATAGAAA+GGG 0.568455 7_2:-24519656 Msa1053720:CDS
ATGAAATTATAGAATTGTTG+GGG 0.573906 7_2:+24518939 None:intergenic
AAACGGTGCTCAAAAGGTGG+TGG 0.578108 7_2:-24524105 Msa1053720:five_prime_UTR
ACGAGGAAGAGGAGAGAGTG+AGG 0.580392 7_2:+24524276 None:intergenic
AAGAGTGAGTTTCAGATCTG+GGG 0.585785 7_2:+24524485 None:intergenic
CATTCCCTTAATTCAAACCA+GGG 0.586453 7_2:-24519595 Msa1053720:CDS
TCTGTAACTAGTAGCTGTTG+TGG 0.587022 7_2:-24518831 Msa1053720:three_prime_UTR
ATTCGAACAACAGCATCTAG+TGG 0.587237 7_2:+24519541 None:intergenic
AGAAGCTGAACGTATTTACA+AGG 0.599619 7_2:-24520651 Msa1053720:five_prime_UTR
ATCAACTAACATCTCTCATG+TGG 0.600121 7_2:-24519510 Msa1053720:CDS
GGTTTGATAGCTTCTGAATG+CGG 0.602638 7_2:+24519079 None:intergenic
TAATTCAAACCAGGGTGGAG+AGG 0.602719 7_2:-24519587 Msa1053720:CDS
TAAGGCCTTACAAAGTGTTG+AGG 0.604439 7_2:-24520675 Msa1053720:five_prime_UTR
GGAGAGGTTGAAGCACCAGA+TGG 0.606259 7_2:-24519571 Msa1053720:CDS
AGAGTGAGTTTCAGATCTGG+GGG 0.609019 7_2:+24524486 None:intergenic
TTGGTGAACGAGGAAGAAGA+AGG 0.614126 7_2:+24524305 None:intergenic
GGATTGTGGACTGAGTGAGT+TGG 0.615745 7_2:+24523933 None:intergenic
TCTCAGAATCGGAGCTCCAA+CGG 0.617048 7_2:-24524181 Msa1053720:five_prime_UTR
GTGAACGATTGGTGGTGAGT+TGG 0.619819 7_2:+24524460 None:intergenic
GAGGAGCGAGTTGGTGAACG+AGG 0.621332 7_2:+24524295 None:intergenic
CTCAAACGGTGCTCAAAAGG+TGG 0.631923 7_2:-24524108 Msa1053720:five_prime_UTR
ACTTGAGTGTGAACGATTGG+TGG 0.632051 7_2:+24524452 None:intergenic
AACTCACATAGCATCTCTTG+TGG 0.637776 7_2:+24520592 None:intergenic
CGTATTTACAAGGATGAGCG+TGG 0.640909 7_2:-24520641 Msa1053720:five_prime_UTR
AGTGTGAACGAAGAAGAAGA+AGG 0.651183 7_2:+24524365 None:intergenic
ACGAGGAAGAAGAAGGAGTG+AGG 0.659994 7_2:+24524312 None:intergenic
TTTCAGAGCAATAAGATCAA+CGG 0.661199 7_2:+24523906 None:intergenic
TCCCTTAATTCAAACCAGGG+TGG 0.672346 7_2:-24519592 Msa1053720:CDS
ACGAAGAAGAAGAAGGAGTG+AGG 0.672625 7_2:+24524372 None:intergenic
GTGTGTGTGAAGGCATAACG+AGG 0.691606 7_2:+24524259 None:intergenic
TCTGAGTCGAGTGTGTGTGA+AGG 0.695204 7_2:+24524249 None:intergenic
ATTCAGAAGCTATCAAACCA+AGG 0.709962 7_2:-24519075 Msa1053720:CDS
GGAATCTGAGCAATATTGGG+TGG 0.768460 7_2:+24523954 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTGTGATTTAAAATTTT+AGG - chr7_2:24519246-24519265 Msa1053720:intron 10.0%
!!! ATTTGTGATTTAAAATTTTA+GGG - chr7_2:24519247-24519266 Msa1053720:intron 10.0%
!!! TTATAACAACTTTTTAAAAA+GGG + chr7_2:24519713-24519732 None:intergenic 10.0%
!!! TTTATAACAACTTTTTAAAA+AGG + chr7_2:24519714-24519733 None:intergenic 10.0%
!!! TTTTTTTAAACTACATAAAT+TGG + chr7_2:24524449-24524468 None:intergenic 10.0%
!!! TATAGTGAAAAATTTGATTT+GGG - chr7_2:24519513-24519532 Msa1053720:CDS 15.0%
!!! AATTTAAAGTAACTTGAATA+AGG + chr7_2:24520517-24520536 None:intergenic 15.0%
!! TATTTATGGTTATTATTGTA+GGG + chr7_2:24521598-24521617 None:intergenic 15.0%
!! TTATTTATGGTTATTATTGT+AGG + chr7_2:24521599-24521618 None:intergenic 15.0%
!!! AGTCAAAAATTATTTTTACA+TGG + chr7_2:24522340-24522359 None:intergenic 15.0%
!! AATGAAATTATAGAATTGTT+GGG + chr7_2:24524157-24524176 None:intergenic 15.0%
!! AAATGAAATTATAGAATTGT+TGG + chr7_2:24524158-24524177 None:intergenic 15.0%
!! CAATAAAATCAATTTAGCAA+AGG + chr7_2:24519221-24519240 None:intergenic 20.0%
!!! AAATTTTAGGGTTTTTGATT+TGG - chr7_2:24519259-24519278 Msa1053720:intron 20.0%
!!! AATTTTAGGGTTTTTGATTT+GGG - chr7_2:24519260-24519279 Msa1053720:intron 20.0%
!! TTGATTCAGAAAATTTGATT+TGG - chr7_2:24519323-24519342 Msa1053720:intron 20.0%
!!! TGATTCAGAAAATTTGATTT+GGG - chr7_2:24519324-24519343 Msa1053720:intron 20.0%
!! ATACAGTGAAAAATTTGATT+TGG - chr7_2:24519480-24519499 Msa1053720:intron 20.0%
!!! TACAGTGAAAAATTTGATTT+GGG - chr7_2:24519481-24519500 Msa1053720:intron 20.0%
!! GTATAGTGAAAAATTTGATT+TGG - chr7_2:24519512-24519531 Msa1053720:CDS 20.0%
!!! TAAAGTCATTTTATTTGTTG+AGG - chr7_2:24519640-24519659 Msa1053720:CDS 20.0%
!!! AACTTTATTTAGGATGTAAA+TGG - chr7_2:24519744-24519763 Msa1053720:intron 20.0%
!! TCAAATAGAAATAATCAAAG+TGG - chr7_2:24520289-24520308 Msa1053720:intron 20.0%
!! AAAAATTATAAACAATGCGA+TGG + chr7_2:24520438-24520457 None:intergenic 20.0%
!!! ATTTTTGTTCAACTAAATTC+TGG - chr7_2:24520703-24520722 Msa1053720:intron 20.0%
!!! TTTTGATTGGATTAACTTAT+TGG - chr7_2:24520759-24520778 Msa1053720:intron 20.0%
!!! GAATAAATTTTACCTTGAAA+AGG + chr7_2:24521361-24521380 None:intergenic 20.0%
!! ACATTAGTTGAAATAGAAAA+GGG - chr7_2:24521417-24521436 Msa1053720:intron 20.0%
!!! GAGTATATTTTATTCAGTAT+TGG + chr7_2:24521533-24521552 None:intergenic 20.0%
!! GAATAAAATATACTCTATGT+AGG - chr7_2:24521538-24521557 Msa1053720:intron 20.0%
!!! TTTTTTTTGCATATGATCTA+TGG - chr7_2:24521657-24521676 Msa1053720:intron 20.0%
!!! ATTTCATCTAACTTTTCTTT+TGG - chr7_2:24522207-24522226 Msa1053720:intron 20.0%
!!! TTTCATCTAACTTTTCTTTT+GGG - chr7_2:24522208-24522227 Msa1053720:intron 20.0%
!!! ATTATTTTTACATGGAATAG+TGG + chr7_2:24522332-24522351 None:intergenic 20.0%
!!! TTTATTTTTTAAAGTGCTCA+TGG - chr7_2:24522646-24522665 Msa1053720:intron 20.0%
!! AACTATGAAGTAAATGTTTA+CGG - chr7_2:24522899-24522918 Msa1053720:five_prime_UTR 20.0%
!!! ACACTGATCTATTTTATATA+GGG - chr7_2:24523012-24523031 Msa1053720:intron 20.0%
!! TATTTATGATATGTGCATAA+AGG - chr7_2:24523819-24523838 Msa1053720:intron 20.0%
!! AAAAAAAGCAAAAAACAAAC+TGG + chr7_2:24523930-24523949 None:intergenic 20.0%
!! ATGAAATTATAGAATTGTTG+GGG + chr7_2:24524156-24524175 None:intergenic 20.0%
!! AATTAGCAAAAAAATTCGTT+AGG + chr7_2:24524349-24524368 None:intergenic 20.0%
! GAATCAAAAACTTAAAGCAA+AGG + chr7_2:24519310-24519329 None:intergenic 25.0%
!!! AAATTTGATTTGGGTTCTTT+TGG - chr7_2:24519333-24519352 Msa1053720:intron 25.0%
!!! AAATTTGATTTGGGTTCTTT+CGG - chr7_2:24519333-24519352 Msa1053720:intron 25.0%
!!! AAATTTGATTTGGGTTCTTT+CGG - chr7_2:24519333-24519352 Msa1053720:intron 25.0%
! AAAATCTAAACCTGTTGAAA+TGG - chr7_2:24519568-24519587 Msa1053720:CDS 25.0%
! AAATCTAAACCTGTTGAAAT+GGG - chr7_2:24519569-24519588 Msa1053720:CDS 25.0%
!! TATTTGTTGAGGAGAAAAAA+AGG - chr7_2:24519651-24519670 Msa1053720:CDS 25.0%
!! CAGTTTCACAAACTTTATTT+AGG - chr7_2:24519734-24519753 Msa1053720:intron 25.0%
!! TTATTTAGGATGTAAATGGT+TGG - chr7_2:24519748-24519767 Msa1053720:intron 25.0%
! ATGACTAGATAAAAGTGAAA+TGG - chr7_2:24519782-24519801 Msa1053720:intron 25.0%
! TGACTAGATAAAAGTGAAAT+GGG - chr7_2:24519783-24519802 Msa1053720:intron 25.0%
! GAATTTAAGTGTGTAAACAA+AGG - chr7_2:24519832-24519851 Msa1053720:intron 25.0%
! TTAAAGCACAAAATTAGAGT+GGG + chr7_2:24519985-24520004 None:intergenic 25.0%
! ATTAAAGCACAAAATTAGAG+TGG + chr7_2:24519986-24520005 None:intergenic 25.0%
! ATAATACAGGCATAATAACT+AGG + chr7_2:24520102-24520121 None:intergenic 25.0%
! TTGACACAGTATTATAATAC+AGG + chr7_2:24520115-24520134 None:intergenic 25.0%
! GTTGAGATTAACCTTATAAA+AGG - chr7_2:24520149-24520168 Msa1053720:intron 25.0%
!! TAGAGTAAGATCCTTTTATA+AGG + chr7_2:24520163-24520182 None:intergenic 25.0%
!!! TTGAATAAGGAAACTGATTT+TGG + chr7_2:24520504-24520523 None:intergenic 25.0%
! AAAGACATCAAATCAAATAG+TGG + chr7_2:24520559-24520578 None:intergenic 25.0%
! TTCAACTAAATTCTGGATAT+TGG - chr7_2:24520710-24520729 Msa1053720:intron 25.0%
!!! TGTATTTTAGCAGTTTTGAT+TGG - chr7_2:24520746-24520765 Msa1053720:intron 25.0%
!! GCTCTCAAGAATTTAATTTA+TGG - chr7_2:24520798-24520817 Msa1053720:intron 25.0%
!! AAAGTATCCTATTTAGATCA+AGG + chr7_2:24520888-24520907 None:intergenic 25.0%
! GTTTGTAAATTTCATTGAGA+CGG + chr7_2:24520937-24520956 None:intergenic 25.0%
! AAGAAGAAGAAGAAAATGAA+GGG + chr7_2:24521191-24521210 None:intergenic 25.0%
!! ATTTTCTTCTTCTTCTTCTT+TGG - chr7_2:24521194-24521213 Msa1053720:intron 25.0%
! TTATTGACATAGATAGAATC+AGG - chr7_2:24521394-24521413 Msa1053720:intron 25.0%
! GACATTAGTTGAAATAGAAA+AGG - chr7_2:24521416-24521435 Msa1053720:intron 25.0%
! CATTAGTTGAAATAGAAAAG+GGG - chr7_2:24521418-24521437 Msa1053720:intron 25.0%
!! TTTGTTGAATGTTGTTTAGA+TGG - chr7_2:24521443-24521462 Msa1053720:intron 25.0%
! ATGAGTTTGTATTGTGTAAA+TGG - chr7_2:24521718-24521737 Msa1053720:intron 25.0%
!!! TTATGTTTGGCTTGTATATA+TGG + chr7_2:24521782-24521801 None:intergenic 25.0%
!! GGGCATTAAATTTTTATGTT+TGG + chr7_2:24521795-24521814 None:intergenic 25.0%
!!! GTTGTTATTTACTATTGAAG+TGG - chr7_2:24521898-24521917 Msa1053720:intron 25.0%
!! AATCTATGTGAAGATTTTGA+GGG + chr7_2:24522302-24522321 None:intergenic 25.0%
!! TAATCTATGTGAAGATTTTG+AGG + chr7_2:24522303-24522322 None:intergenic 25.0%
!! AAGATACTGATACTGATTAA+GGG + chr7_2:24522545-24522564 None:intergenic 25.0%
!! AAAGATACTGATACTGATTA+AGG + chr7_2:24522546-24522565 None:intergenic 25.0%
! GAATTGCTATAATGTTAATG+TGG - chr7_2:24522619-24522638 Msa1053720:intron 25.0%
! CTCAAAACATAACGAATATA+AGG + chr7_2:24522680-24522699 None:intergenic 25.0%
!! TCAATATGTATCTTTTAGTG+TGG - chr7_2:24522743-24522762 Msa1053720:intron 25.0%
!! ATTTACTTCATAGTTAGTCT+TGG + chr7_2:24522894-24522913 None:intergenic 25.0%
!!! TGCAATACACTTTTTTATAC+AGG - chr7_2:24522966-24522985 Msa1053720:intron 25.0%
!!! GCAATACACTTTTTTATACA+GGG - chr7_2:24522967-24522986 Msa1053720:intron 25.0%
!! CACACTGATCTATTTTATAT+AGG - chr7_2:24523011-24523030 Msa1053720:intron 25.0%
! TAGTTAGTGTGATTTAACTA+TGG + chr7_2:24523089-24523108 None:intergenic 25.0%
! ATACTTCACAATGATTCATA+TGG + chr7_2:24523153-24523172 None:intergenic 25.0%
!! ATTGAATTTCATTTGAGATG+AGG + chr7_2:24523300-24523319 None:intergenic 25.0%
!! AAGAAAGTATATAGAGATGA+AGG + chr7_2:24523404-24523423 None:intergenic 25.0%
! ATTTCCATGATAACATGTTT+GGG + chr7_2:24523787-24523806 None:intergenic 25.0%
! AATTTCCATGATAACATGTT+TGG + chr7_2:24523788-24523807 None:intergenic 25.0%
! AAAAAACAAACTGGAAAAGT+TGG + chr7_2:24523921-24523940 None:intergenic 25.0%
!!! TGAAGCATTATGAAATTTTG+AGG - chr7_2:24524178-24524197 Msa1053720:five_prime_UTR 25.0%
! TTTGAGGATTGTTAGTATTA+AGG - chr7_2:24524194-24524213 Msa1053720:five_prime_UTR 25.0%
!! GTTACAGATATCAACTTTTT+CGG + chr7_2:24524249-24524268 None:intergenic 25.0%
! TTAACTATTTGCAAATTCAC+AGG + chr7_2:24524313-24524332 None:intergenic 25.0%
! ACAAAGTATCACTGAAGATT+GGG + chr7_2:24519041-24519060 None:intergenic 30.0%
TTTCAGAGCAATAAGATCAA+CGG + chr7_2:24519189-24519208 None:intergenic 30.0%
AAAACTTAAAGCAAAGGTGA+AGG + chr7_2:24519304-24519323 None:intergenic 30.0%
! TTTTGGTAAGTTAACACGTT+TGG - chr7_2:24519442-24519461 Msa1053720:intron 30.0%
TTTGGTAAGTTAACACGTTT+GGG - chr7_2:24519443-24519462 Msa1053720:intron 30.0%
AATCTAAACCTGTTGAAATG+GGG - chr7_2:24519570-24519589 Msa1053720:CDS 30.0%
!! GTGAAATGGGTTAATGAAAA+TGG - chr7_2:24519796-24519815 Msa1053720:intron 30.0%
TAAAGCACAAAATTAGAGTG+GGG + chr7_2:24519984-24520003 None:intergenic 30.0%
AAAAAATCCATAGCACAAAG+TGG + chr7_2:24520589-24520608 None:intergenic 30.0%
TATCCTATTTAGATCAAGGA+CGG + chr7_2:24520884-24520903 None:intergenic 30.0%
AGCATATCTCAGAATAATAG+TGG - chr7_2:24521046-24521065 Msa1053720:intron 30.0%
TTGTTAAATAGCAGCTATAG+TGG + chr7_2:24521108-24521127 None:intergenic 30.0%
AGAAGAAGAAGAAAAAGAAG+AGG + chr7_2:24521143-24521162 None:intergenic 30.0%
AGAAGAAGAAGAAAATGAAG+GGG + chr7_2:24521190-24521209 None:intergenic 30.0%
GAAGAAGAAGAAGAAAATGA+AGG + chr7_2:24521192-24521211 None:intergenic 30.0%
ATGGTTATTATTGTAGGGTA+TGG + chr7_2:24521593-24521612 None:intergenic 30.0%
TATTGTGTAAATGGTTGTGA+AGG - chr7_2:24521727-24521746 Msa1053720:intron 30.0%
! CATTGTAGTTTTCTTTGCAA+GGG + chr7_2:24521815-24521834 None:intergenic 30.0%
AAAGAAAACTACAATGGCAT+AGG - chr7_2:24521819-24521838 Msa1053720:intron 30.0%
AAGAAAACTACAATGGCATA+GGG - chr7_2:24521820-24521839 Msa1053720:intron 30.0%
TCACATCTTAGTAGAAAACT+TGG - chr7_2:24521987-24522006 Msa1053720:intron 30.0%
CTTCTTGTTGAAATTGATCA+GGG + chr7_2:24522050-24522069 None:intergenic 30.0%
ACTTCTTGTTGAAATTGATC+AGG + chr7_2:24522051-24522070 None:intergenic 30.0%
! TTTCAACAAGAAGTGTAGAT+AGG - chr7_2:24522057-24522076 Msa1053720:intron 30.0%
! AGATACTGATACTGATTAAG+GGG + chr7_2:24522544-24522563 None:intergenic 30.0%
! TAAAGTGAAATTTTTCGCAC+AGG - chr7_2:24523048-24523067 Msa1053720:intron 30.0%
! AAAGTGAAATTTTTCGCACA+GGG - chr7_2:24523049-24523068 Msa1053720:intron 30.0%
GAAATTCAATATGCAACTGA+AGG - chr7_2:24523310-24523329 Msa1053720:intron 30.0%
! CTCTATATACTTTCTTTTGC+AGG - chr7_2:24523408-24523427 Msa1053720:intron 30.0%
ATTGTGTAATAGCCTAGTAA+AGG - chr7_2:24523737-24523756 Msa1053720:intron 30.0%
TTGTGTAATAGCCTAGTAAA+GGG - chr7_2:24523738-24523757 Msa1053720:intron 30.0%
TTTCCATGATAACATGTTTG+GGG + chr7_2:24523786-24523805 None:intergenic 30.0%
TGTTATCATGGAAATTTGCA+TGG - chr7_2:24523792-24523811 Msa1053720:intron 30.0%
GTTATCATGGAAATTTGCAT+GGG - chr7_2:24523793-24523812 Msa1053720:intron 30.0%
AGTAAAAAGTTGCAAAAGCA+GGG - chr7_2:24523870-24523889 Msa1053720:intron 30.0%
!!! ATCAACTTTTTCGGTAAGAA+GGG + chr7_2:24524240-24524259 None:intergenic 30.0%
!!! TATCAACTTTTTCGGTAAGA+AGG + chr7_2:24524241-24524260 None:intergenic 30.0%
AGCAAAAAAATTCGTTAGGA+AGG + chr7_2:24524345-24524364 None:intergenic 30.0%
! AGAGAGTTAGGTTAGGTTTT+GGG + chr7_2:24518876-24518895 None:intergenic 35.0%
! CACAAAGTATCACTGAAGAT+TGG + chr7_2:24519042-24519061 None:intergenic 35.0%
ACGTTTGATTCCAACTCAAA+AGG - chr7_2:24519107-24519126 Msa1053720:intron 35.0%
GTTGGAATCTGAGCAATATT+GGG + chr7_2:24519144-24519163 None:intergenic 35.0%
AGTTGGAATCTGAGCAATAT+TGG + chr7_2:24519145-24519164 None:intergenic 35.0%
! GTTGATCTTATTGCTCTGAA+AGG - chr7_2:24519188-24519207 Msa1053720:intron 35.0%
ACGATACACATAACACGTTT+GGG - chr7_2:24519416-24519435 Msa1053720:intron 35.0%
!! ATAACACGTTTGGGTTCTTT+TGG - chr7_2:24519425-24519444 Msa1053720:intron 35.0%
!! TTAACACGTTTGGGTTCTTT+TGG - chr7_2:24519452-24519471 Msa1053720:intron 35.0%
AAAAAAGGACAGAACACGAT+TGG - chr7_2:24519666-24519685 Msa1053720:intron 35.0%
AAAGGATTTCTACACTGCTT+TGG - chr7_2:24519850-24519869 Msa1053720:intron 35.0%
CTCACAATCACATGACTAAT+AGG + chr7_2:24519944-24519963 None:intergenic 35.0%
GCAGCTAACTGTCTAATTTA+TGG + chr7_2:24520354-24520373 None:intergenic 35.0%
CATCAAATCAAATAGTGGCA+TGG + chr7_2:24520554-24520573 None:intergenic 35.0%
! ATTAAAGCCACTTTGTGCTA+TGG - chr7_2:24520579-24520598 Msa1053720:intron 35.0%
TATATACACACTAGTCGCTT+AGG - chr7_2:24520628-24520647 Msa1053720:five_prime_UTR 35.0%
ATCCTATTTAGATCAAGGAC+GGG + chr7_2:24520883-24520902 None:intergenic 35.0%
!! GATACTTTTCTGTGTTGTTG+TGG - chr7_2:24520900-24520919 Msa1053720:intron 35.0%
ATTTCATTGAGACGGATCAT+CGG + chr7_2:24520929-24520948 None:intergenic 35.0%
TTGTCAAATAGCAGCTATAG+TGG + chr7_2:24521011-24521030 None:intergenic 35.0%
! CTTCTTCTTCTTTGGTAACA+AGG - chr7_2:24521202-24521221 Msa1053720:intron 35.0%
GTTCTCAGATTTGTGCAATT+GGG - chr7_2:24521296-24521315 Msa1053720:intron 35.0%
! TATCCTACTTCACCTTTTCA+AGG - chr7_2:24521346-24521365 Msa1053720:intron 35.0%
TTACCTTGAAAAGGTGAAGT+AGG + chr7_2:24521352-24521371 None:intergenic 35.0%
! CCATTGTAGTTTTCTTTGCA+AGG + chr7_2:24521816-24521835 None:intergenic 35.0%
CCTTGCAAAGAAAACTACAA+TGG - chr7_2:24521813-24521832 Msa1053720:intron 35.0%
!! AGATGCCATTGTTTTGCAAT+AGG - chr7_2:24521921-24521940 Msa1053720:intron 35.0%
! AACAAGAAGTGTAGATAGGT+AGG - chr7_2:24522061-24522080 Msa1053720:intron 35.0%
TTCTTCCTCAACACTTTGTA+AGG + chr7_2:24522425-24522444 None:intergenic 35.0%
AGAAGCTGAACGTATTTACA+AGG - chr7_2:24522441-24522460 Msa1053720:intron 35.0%
! ATACTGATACTGATTAAGGG+GGG + chr7_2:24522542-24522561 None:intergenic 35.0%
! GATACTGATACTGATTAAGG+GGG + chr7_2:24522543-24522562 None:intergenic 35.0%
! CTAGAGCAAGATACTGATTA+AGG + chr7_2:24522576-24522595 None:intergenic 35.0%
AACTCTCACTAACAATGATG+TGG + chr7_2:24522710-24522729 None:intergenic 35.0%
TACTTCACACTAACCATGAT+AGG - chr7_2:24522815-24522834 Msa1053720:intron 35.0%
ACTTCACACTAACCATGATA+GGG - chr7_2:24522816-24522835 Msa1053720:intron 35.0%
! CATGATTGATAACCCTATCA+TGG + chr7_2:24522831-24522850 None:intergenic 35.0%
!! TACTTCATAGTTAGTCTTGG+TGG + chr7_2:24522891-24522910 None:intergenic 35.0%
TGTATTGCATGCGACTTTAT+AGG + chr7_2:24522955-24522974 None:intergenic 35.0%
AAACACTTATGTTTGTGACC+AGG + chr7_2:24523238-24523257 None:intergenic 35.0%
! TTTGAGATGAGGCATAGTAT+AGG + chr7_2:24523289-24523308 None:intergenic 35.0%
CATTCCCTTAATTCAAACCA+GGG - chr7_2:24523497-24523516 Msa1053720:intron 35.0%
ATCAACTAACATCTCTCATG+TGG - chr7_2:24523582-24523601 Msa1053720:intron 35.0%
! TCTCATGTGGATTGATGAAA+AGG - chr7_2:24523595-24523614 Msa1053720:intron 35.0%
TGTGTAATAGCCTAGTAAAG+GGG - chr7_2:24523739-24523758 Msa1053720:intron 35.0%
ATGATAAAAGCCCCTTTACT+AGG + chr7_2:24523752-24523771 None:intergenic 35.0%
TTCCATGATAACATGTTTGG+GGG + chr7_2:24523785-24523804 None:intergenic 35.0%
GAGTAAAAAGTTGCAAAAGC+AGG - chr7_2:24523869-24523888 Msa1053720:intron 35.0%
AGTAGATTGATCAATGTCAG+AGG + chr7_2:24523972-24523991 None:intergenic 35.0%
GACATTGATCAATCTACTTC+AGG - chr7_2:24523974-24523993 Msa1053720:five_prime_UTR 35.0%
ATTCAGAAGCTATCAAACCA+AGG - chr7_2:24524017-24524036 Msa1053720:intron 35.0%
!!! CGTGATATTTCTGGAGATTT+TGG - chr7_2:24524084-24524103 Msa1053720:five_prime_UTR 35.0%
AGAATTGTTGGGGAGTTAAT+AGG + chr7_2:24524146-24524165 None:intergenic 35.0%
AAACATGTAGTAGCAGTTCA+TGG - chr7_2:24524372-24524391 Msa1053720:five_prime_UTR 35.0%
AAGAGTGAGTTTCAGATCTG+GGG + chr7_2:24518610-24518629 None:intergenic 40.0%
CAAGAGTGAGTTTCAGATCT+GGG + chr7_2:24518611-24518630 None:intergenic 40.0%
TCAAGAGTGAGTTTCAGATC+TGG + chr7_2:24518612-24518631 None:intergenic 40.0%
AAGGAGAAGAAGGAGTAAGA+AGG + chr7_2:24518668-24518687 None:intergenic 40.0%
! TGAGGACGAGTGAAATTTTG+GGG + chr7_2:24518705-24518724 None:intergenic 40.0%
! GTGAGGACGAGTGAAATTTT+GGG + chr7_2:24518706-24518725 None:intergenic 40.0%
! AGTGAGGACGAGTGAAATTT+TGG + chr7_2:24518707-24518726 None:intergenic 40.0%
AGTGTGAACGAAGAAGAAGA+AGG + chr7_2:24518730-24518749 None:intergenic 40.0%
! CAGAGAGTTAGGTTAGGTTT+TGG + chr7_2:24518877-24518896 None:intergenic 40.0%
CCTAACCTAACTCTCTGAAT+CGG - chr7_2:24518880-24518899 Msa1053720:three_prime_UTR 40.0%
TGAGATTAAGTGAGTTCCGT+TGG + chr7_2:24518930-24518949 None:intergenic 40.0%
TCACTCAATCGGAACTCAAA+CGG - chr7_2:24518970-24518989 Msa1053720:three_prime_UTR 40.0%
GCTCAATCTTCTCACTCAAT+CGG - chr7_2:24519009-24519028 Msa1053720:exon 40.0%
AGCAATAAGATCAACGGTGA+TGG + chr7_2:24519183-24519202 None:intergenic 40.0%
ATGTGTATCGTCACAGGTTA+TGG + chr7_2:24519407-24519426 None:intergenic 40.0%
GACGATACACATAACACGTT+TGG - chr7_2:24519415-24519434 Msa1053720:intron 40.0%
!! ACGTTTGGGTTCTTTTGGTT+TGG - chr7_2:24519457-24519476 Msa1053720:intron 40.0%
CTATGCACCTGTTGCATAAT+GGG - chr7_2:24519890-24519909 Msa1053720:intron 40.0%
AAACAAGCCCATTATGCAAC+AGG + chr7_2:24519900-24519919 None:intergenic 40.0%
GTTAATCACATGCGTGTGTA+AGG - chr7_2:24520218-24520237 Msa1053720:intron 40.0%
!! TTCTCTTTAGAACCGACAAG+TGG - chr7_2:24520470-24520489 Msa1053720:intron 40.0%
CGTTCTCAGATTTGTGCAAT+TGG - chr7_2:24521295-24521314 Msa1053720:intron 40.0%
!! GGTGTTGGCAAGCTTATTTA+TGG + chr7_2:24521612-24521631 None:intergenic 40.0%
!! TTGCCAACACCTGTTTTGAA+GGG - chr7_2:24521621-24521640 Msa1053720:intron 40.0%
!! TGCCATTGTTTTGCAATAGG+TGG - chr7_2:24521924-24521943 Msa1053720:intron 40.0%
!! GCCATTGTTTTGCAATAGGT+GGG - chr7_2:24521925-24521944 Msa1053720:intron 40.0%
ACCCACCTATTGCAAAACAA+TGG + chr7_2:24521929-24521948 None:intergenic 40.0%
!! ATTGTTTTGCAATAGGTGGG+TGG - chr7_2:24521928-24521947 Msa1053720:intron 40.0%
!!! CAATAGGTGGGTGGTTTTTT+GGG - chr7_2:24521937-24521956 Msa1053720:intron 40.0%
GATAGGTAGGAATATGCGAA+AGG - chr7_2:24522074-24522093 Msa1053720:intron 40.0%
!! TAAGGCCTTACAAAGTGTTG+AGG - chr7_2:24522417-24522436 Msa1053720:intron 40.0%
AACTCACATAGCATCTCTTG+TGG + chr7_2:24522503-24522522 None:intergenic 40.0%
! GAGCAAGATACTGATTAAGG+AGG + chr7_2:24522573-24522592 None:intergenic 40.0%
CTTATGTTTGTGACCAGGAT+TGG + chr7_2:24523233-24523252 None:intergenic 40.0%
AGCAGTCAGAACTGATAGAA+AGG - chr7_2:24523435-24523454 Msa1053720:intron 40.0%
GCAGTCAGAACTGATAGAAA+GGG - chr7_2:24523436-24523455 Msa1053720:intron 40.0%
! CCTGGTTTGAATTAAGGGAA+TGG + chr7_2:24523499-24523518 None:intergenic 40.0%
CCATTCCCTTAATTCAAACC+AGG - chr7_2:24523496-24523515 Msa1053720:intron 40.0%
! TCCACCCTGGTTTGAATTAA+GGG + chr7_2:24523504-24523523 None:intergenic 40.0%
ATCCCCCAAACATGTTATCA+TGG - chr7_2:24523780-24523799 Msa1053720:intron 40.0%
AATGTCAGAGGCAGATCATT+TGG + chr7_2:24523960-24523979 None:intergenic 40.0%
! GTTTGATAGCTTCTGAATGC+GGG + chr7_2:24524015-24524034 None:intergenic 40.0%
! GGTTTGATAGCTTCTGAATG+CGG + chr7_2:24524016-24524035 None:intergenic 40.0%
GTTGGATGTCGTGATATTTC+TGG - chr7_2:24524075-24524094 Msa1053720:intron 40.0%
TCTGTAACTAGTAGCTGTTG+TGG - chr7_2:24524261-24524280 Msa1053720:five_prime_UTR 40.0%
!! GTGGTTTTACAGATGATCGA+AGG - chr7_2:24524280-24524299 Msa1053720:five_prime_UTR 40.0%
TGCTATAGTGCAACTGTGAA+AGG - chr7_2:24524412-24524431 Msa1053720:five_prime_UTR 40.0%
!! TTTTGGGGGAAGTGAGAAAG+CGG + chr7_2:24518586-24518605 None:intergenic 45.0%
! TTTCAGATCTGGGGGTTTTG+GGG + chr7_2:24518601-24518620 None:intergenic 45.0%
! GTTTCAGATCTGGGGGTTTT+GGG + chr7_2:24518602-24518621 None:intergenic 45.0%
! AGTTTCAGATCTGGGGGTTT+TGG + chr7_2:24518603-24518622 None:intergenic 45.0%
AGAGTGAGTTTCAGATCTGG+GGG + chr7_2:24518609-24518628 None:intergenic 45.0%
ACTTGAGTGTGAACGATTGG+TGG + chr7_2:24518643-24518662 None:intergenic 45.0%
GTCACTTGAGTGTGAACGAT+TGG + chr7_2:24518646-24518665 None:intergenic 45.0%
ACGAGTGAAGAAGGAGAAGA+AGG + chr7_2:24518678-24518697 None:intergenic 45.0%
! GAGGACGAGTGAAATTTTGG+GGG + chr7_2:24518704-24518723 None:intergenic 45.0%
ACGAAGAAGAAGAAGGAGTG+AGG + chr7_2:24518723-24518742 None:intergenic 45.0%
TTGGTGAACGAGGAAGAAGA+AGG + chr7_2:24518790-24518809 None:intergenic 45.0%
CCGATTCAGAGAGTTAGGTT+AGG + chr7_2:24518883-24518902 None:intergenic 45.0%
!! TAGCACCGATTCAGAGAGTT+AGG + chr7_2:24518888-24518907 None:intergenic 45.0%
!! CGGTGCTACAATCTCAGAAT+CGG - chr7_2:24518900-24518919 Msa1053720:three_prime_UTR 45.0%
CACTCACTCACTCACTCAAT+CGG - chr7_2:24518959-24518978 Msa1053720:three_prime_UTR 45.0%
GAACTCAAACGGTGCTCAAA+AGG - chr7_2:24518981-24519000 Msa1053720:three_prime_UTR 45.0%
GGAATCTGAGCAATATTGGG+TGG + chr7_2:24519141-24519160 None:intergenic 45.0%
!! AGATCAACGGTGATGGATTG+TGG + chr7_2:24519176-24519195 None:intergenic 45.0%
CGTGTTATGTGTATCGTCAC+AGG + chr7_2:24519413-24519432 None:intergenic 45.0%
ACCTGTTGAAATGGGGTTTG+TGG - chr7_2:24519577-24519596 Msa1053720:CDS 45.0%
CCTGTTGAAATGGGGTTTGT+GGG - chr7_2:24519578-24519597 Msa1053720:CDS 45.0%
! GGGTTTGTGGGCTATGTATA+TGG - chr7_2:24519590-24519609 Msa1053720:CDS 45.0%
!! CTGCTTTGGAGTGTCATCAT+CGG - chr7_2:24519864-24519883 Msa1053720:intron 45.0%
GCTATGCACCTGTTGCATAA+TGG - chr7_2:24519889-24519908 Msa1053720:intron 45.0%
! TTTAGAACCGACAAGTGGCT+TGG - chr7_2:24520475-24520494 Msa1053720:intron 45.0%
TAGTGGCATGGCGAACATTA+AGG + chr7_2:24520542-24520561 None:intergenic 45.0%
TACACACTAGTCGCTTAGGT+CGG - chr7_2:24520632-24520651 Msa1053720:five_prime_UTR 45.0%
AGCCCGTCCTTGATCTAAAT+AGG - chr7_2:24520878-24520897 Msa1053720:intron 45.0%
GTGGCGCTATAGCACTATAA+CGG + chr7_2:24521089-24521108 None:intergenic 45.0%
AGCTGAAGAATTGCGAACGA+CGG + chr7_2:24521327-24521346 None:intergenic 45.0%
!! CTTGCCAACACCTGTTTTGA+AGG - chr7_2:24521620-24521639 Msa1053720:intron 45.0%
CAACCCTTCAAAACAGGTGT+TGG + chr7_2:24521627-24521646 None:intergenic 45.0%
!!! CAACACCTGTTTTGAAGGGT+TGG - chr7_2:24521625-24521644 Msa1053720:intron 45.0%
ACTCTCCAACCCTTCAAAAC+AGG + chr7_2:24521633-24521652 None:intergenic 45.0%
!!! GCAATAGGTGGGTGGTTTTT+TGG - chr7_2:24521936-24521955 Msa1053720:intron 45.0%
TTACTTGCAACCCTTGTGTC+AGG - chr7_2:24522390-24522409 Msa1053720:intron 45.0%
!! ACCCTTGTGTCAGGTTGATA+AGG - chr7_2:24522399-24522418 Msa1053720:intron 45.0%
GCCTTATCAACCTGACACAA+GGG + chr7_2:24522403-24522422 None:intergenic 45.0%
CGTATTTACAAGGATGAGCG+TGG - chr7_2:24522451-24522470 Msa1053720:intron 45.0%
ATGTTTGTGACCAGGATTGG+TGG + chr7_2:24523230-24523249 None:intergenic 45.0%
TCCCTTAATTCAAACCAGGG+TGG - chr7_2:24523500-24523519 Msa1053720:intron 45.0%
! CTCCACCCTGGTTTGAATTA+AGG + chr7_2:24523505-24523524 None:intergenic 45.0%
TAATTCAAACCAGGGTGGAG+AGG - chr7_2:24523505-24523524 Msa1053720:intron 45.0%
TCTAGTGGAGTCATTCCATC+TGG + chr7_2:24523539-24523558 None:intergenic 45.0%
TATCACGACATCCAACTTCC+AGG + chr7_2:24524071-24524090 None:intergenic 45.0%
!! TTTAATTAAGTTAATAATAA+AGG + chr7_2:24521689-24521708 None:intergenic 5.0%
TTTGGGGGAAGTGAGAAAGC+GGG + chr7_2:24518585-24518604 None:intergenic 50.0%
!! TTCAGATCTGGGGGTTTTGG+GGG + chr7_2:24518600-24518619 None:intergenic 50.0%
!! GTGAACGATTGGTGGTGAGT+TGG + chr7_2:24518635-24518654 None:intergenic 50.0%
AAGAAGGAGTGAGGACGAGT+TGG + chr7_2:24518714-24518733 None:intergenic 50.0%
ACGAGGAAGAAGAAGGAGTG+AGG + chr7_2:24518783-24518802 None:intergenic 50.0%
! GTGAAGGCATAACGAGGAAG+AGG + chr7_2:24518830-24518849 None:intergenic 50.0%
! GTGTGTGTGAAGGCATAACG+AGG + chr7_2:24518836-24518855 None:intergenic 50.0%
TCTGAGTCGAGTGTGTGTGA+AGG + chr7_2:24518846-24518865 None:intergenic 50.0%
TCTCAGAATCGGAGCTCCAA+CGG - chr7_2:24518911-24518930 Msa1053720:three_prime_UTR 50.0%
CTCAAACGGTGCTCAAAAGG+TGG - chr7_2:24518984-24519003 Msa1053720:three_prime_UTR 50.0%
AAACGGTGCTCAAAAGGTGG+TGG - chr7_2:24518987-24519006 Msa1053720:three_prime_UTR 50.0%
! GGATTGTGGACTGAGTGAGT+TGG + chr7_2:24519162-24519181 None:intergenic 50.0%
CCCACAAACCCCATTTCAAC+AGG + chr7_2:24519581-24519600 None:intergenic 50.0%
GCTTAGGTCGGATGGTAGTT+TGG - chr7_2:24520644-24520663 Msa1053720:five_prime_UTR 50.0%
!!! AGGTGGGTGGTTTTTTGGGT+TGG - chr7_2:24521941-24521960 Msa1053720:intron 50.0%
! GGCCTTATCAACCTGACACA+AGG + chr7_2:24522404-24522423 None:intergenic 50.0%
! TGTGACCAGGATTGGTGGTT+GGG + chr7_2:24523225-24523244 None:intergenic 50.0%
! TTGTGACCAGGATTGGTGGT+TGG + chr7_2:24523226-24523245 None:intergenic 50.0%
! GACGATCTGAAGCAGAACCT+TGG + chr7_2:24524037-24524056 None:intergenic 50.0%
TGCTTCAGATCGTCAGCTGA+TGG - chr7_2:24524043-24524062 Msa1053720:intron 50.0%
GCTTCAGATCGTCAGCTGAT+GGG - chr7_2:24524044-24524063 Msa1053720:intron 50.0%
TTGGGGGAAGTGAGAAAGCG+GGG + chr7_2:24518584-24518603 None:intergenic 55.0%
TGGGGGTGAACGAGTGAAGA+AGG + chr7_2:24518687-24518706 None:intergenic 55.0%
! AAGGAGTGAGGACGAGTTGG+TGG + chr7_2:24518771-24518790 None:intergenic 55.0%
ACGAGGAAGAGGAGAGAGTG+AGG + chr7_2:24518819-24518838 None:intergenic 55.0%
!! GGTGAGCGAGCCTTTTGAGT+TGG + chr7_2:24519120-24519139 None:intergenic 55.0%
TTGGCGTCCAAGCCACTTGT+CGG + chr7_2:24520485-24520504 None:intergenic 55.0%
CACTAGTCGCTTAGGTCGGA+TGG - chr7_2:24520636-24520655 Msa1053720:five_prime_UTR 55.0%
AGATCCCCAACCACCAATCC+TGG - chr7_2:24523217-24523236 Msa1053720:intron 55.0%
! GTGACCAGGATTGGTGGTTG+GGG + chr7_2:24523224-24523243 None:intergenic 55.0%
! GGAGAGGTTGAAGCACCAGA+TGG - chr7_2:24523521-24523540 Msa1053720:intron 55.0%
AGCTGATGGGACCTGGAAGT+TGG - chr7_2:24524057-24524076 Msa1053720:intron 55.0%
TGGGGGAAGTGAGAAAGCGG+GGG + chr7_2:24518583-24518602 None:intergenic 60.0%
!! GAGGAGCGAGTTGGTGAACG+AGG + chr7_2:24518800-24518819 None:intergenic 60.0%
GGAGAGAGTGAGGAGCGAGT+TGG + chr7_2:24518809-24518828 None:intergenic 60.0%
GTGCTTCAACCTCTCCACCC+TGG + chr7_2:24523517-24523536 None:intergenic 60.0%
GATCGTCAGCTGATGGGACC+TGG - chr7_2:24524050-24524069 Msa1053720:intron 60.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 24518568 24524546 24518568 ID=Msa1053720;Name=Msa1053720
chr7_2 mRNA 24518568 24524546 24518568 ID=Msa1053720-mRNA-1;Parent=Msa1053720;Name=Msa1053720-mRNA-1;_AED=0.04;_eAED=0.06;_QI=700|0.6|0.83|1|0.6|0.83|6|458|93
chr7_2 exon 24518568 24519118 24518568 ID=Msa1053720-mRNA-1:exon:5313;Parent=Msa1053720-mRNA-1
chr7_2 exon 24519498 24519684 24519498 ID=Msa1053720-mRNA-1:exon:5312;Parent=Msa1053720-mRNA-1
chr7_2 exon 24520599 24520702 24520599 ID=Msa1053720-mRNA-1:exon:5311;Parent=Msa1053720-mRNA-1
chr7_2 exon 24522897 24522922 24522897 ID=Msa1053720-mRNA-1:exon:5310;Parent=Msa1053720-mRNA-1
chr7_2 exon 24523905 24524013 24523905 ID=Msa1053720-mRNA-1:exon:5309;Parent=Msa1053720-mRNA-1
chr7_2 exon 24524084 24524546 24524084 ID=Msa1053720-mRNA-1:exon:5308;Parent=Msa1053720-mRNA-1
chr7_2 five_prime_UTR 24524084 24524546 24524084 ID=Msa1053720-mRNA-1:five_prime_utr;Parent=Msa1053720-mRNA-1
chr7_2 five_prime_UTR 24523905 24524013 24523905 ID=Msa1053720-mRNA-1:five_prime_utr;Parent=Msa1053720-mRNA-1
chr7_2 five_prime_UTR 24522897 24522922 24522897 ID=Msa1053720-mRNA-1:five_prime_utr;Parent=Msa1053720-mRNA-1
chr7_2 five_prime_UTR 24520601 24520702 24520601 ID=Msa1053720-mRNA-1:five_prime_utr;Parent=Msa1053720-mRNA-1
chr7_2 CDS 24520599 24520600 24520599 ID=Msa1053720-mRNA-1:cds;Parent=Msa1053720-mRNA-1
chr7_2 CDS 24519498 24519684 24519498 ID=Msa1053720-mRNA-1:cds;Parent=Msa1053720-mRNA-1
chr7_2 CDS 24519026 24519118 24519026 ID=Msa1053720-mRNA-1:cds;Parent=Msa1053720-mRNA-1
chr7_2 three_prime_UTR 24518568 24519025 24518568 ID=Msa1053720-mRNA-1:three_prime_utr;Parent=Msa1053720-mRNA-1
Gene Sequence

>Msa1053720

ATGTATGAGCAGTCAGAACTGATAGAAAGGGAACTAGAGCAAATGACAGAGCAGATCAAGTCAATTATCCATTCCCTTAATTCAAACCAGGGTGGAGAGGTTGAAGCACCAGATGGAATGACTCCACTAGATGCTGTTGTTCGAATTTTAAATAATCAACTAACATCTCTCATGTGGATTGATGAAAAGGCTGAAGAATTTTCTTCCCGCATTCAGAAGCTATCAAACCAAGGTTCTGCTTCAGATCGTCAGCTGATGGGACCTGGAAGTTGGATGTCGTGA
Protein sequence

>Msa1053720

MYEQSELIERELEQMTEQIKSIIHSLNSNQGGEVEAPDGMTPLDAVVRILNNQLTSLMWIDEKAEEFSSRIQKLSNQGSASDRQLMGPGSWMS*