Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1065240 | XP_003623690.1 | 99.281 | 556 | 4 | 0 | 1 | 556 | 1 | 556 | 0.0 | 1131 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1065240 | sp|Q42908|PMGI_MESCR | 87.612 | 557 | 68 | 1 | 1 | 556 | 1 | 557 | 0.0 | 1026 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1065240 | B7FLD9 | 99.281 | 556 | 4 | 0 | 1 | 556 | 1 | 556 | 0.0 | 1131 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0654520 | Msa1065240 | -0.801464 | 8.893153e-49 | -8.615850e-47 |
| Msa0371880 | Msa1065240 | 0.816327 | 5.855187e-52 | -8.615850e-47 |
| Msa0431980 | Msa1065240 | 0.825851 | 3.741099e-54 | -8.615850e-47 |
| Msa0460740 | Msa1065240 | 0.823728 | 1.184949e-53 | -8.615850e-47 |
| Msa1027070 | Msa1065240 | 0.861921 | 7.304078e-64 | -8.615850e-47 |
| Msa1065240 | Msa1368710 | 0.810137 | 1.338613e-50 | -8.615850e-47 |
| Msa1065240 | Msa1374830 | 0.849703 | 2.727948e-60 | -8.615850e-47 |
| Msa0319640 | Msa1065240 | 0.809913 | 1.496021e-50 | -8.615850e-47 |
| Msa0520850 | Msa1065240 | 0.802331 | 5.902853e-49 | -8.615850e-47 |
| Msa0588630 | Msa1065240 | -0.802768 | 4.796817e-49 | -8.615850e-47 |
| Msa0870750 | Msa1065240 | 0.816186 | 6.297441e-52 | -8.615850e-47 |
| Msa0973420 | Msa1065240 | 0.819245 | 1.284995e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1065240 | MtrunA17_Chr7g0245561 | 99.281 | 556 | 4 | 0 | 1 | 556 | 1 | 556 | 0.0 | 1131 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1065240 | AT1G09780.1 | 84.505 | 555 | 85 | 1 | 3 | 556 | 2 | 556 | 0.0 | 972 |
| Msa1065240 | AT3G08590.1 | 82.796 | 558 | 94 | 2 | 1 | 556 | 1 | 558 | 0.0 | 959 |
| Msa1065240 | AT3G08590.2 | 82.796 | 558 | 94 | 2 | 1 | 556 | 1 | 558 | 0.0 | 959 |
Find 157 sgRNAs with CRISPR-Local
Find 301 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTACTAATATACCTGTTTA+AGG | 0.133335 | 7_2:-58840328 | None:intergenic |
| ATCTCCAAAGCCTTCATTAA+TGG | 0.187385 | 7_2:-58843414 | None:intergenic |
| TTTGTACAGTTGTTGCTTAA+AGG | 0.258662 | 7_2:+58841765 | Msa1065240:intron |
| GACAGTTGCTGTTATTGTTT+TGG | 0.277615 | 7_2:+58840235 | Msa1065240:CDS |
| TGCTGCCCTCAATGTCTTGA+TGG | 0.289323 | 7_2:-58842747 | None:intergenic |
| GTCTTTCCCTTTGGTAGCTT+AGG | 0.293931 | 7_2:-58840215 | None:intergenic |
| TACTGATGGTCGTGATGTTT+TGG | 0.304185 | 7_2:+58841830 | Msa1065240:CDS |
| ACTTCCAACTGAGGATGATA+TGG | 0.315941 | 7_2:+58840482 | Msa1065240:CDS |
| CACGACCATCAGTAAGAATA+TGG | 0.334028 | 7_2:-58841821 | None:intergenic |
| CATTCCTCCACACTTGTTTG+TGG | 0.335160 | 7_2:+58844461 | Msa1065240:three_prime_UTR |
| AATTCAACAGGTTAAGGTTT+TGG | 0.344300 | 7_2:+58839895 | Msa1065240:five_prime_UTR |
| GTTGACATTGCTCTAGAAAC+TGG | 0.347541 | 7_2:+58841549 | Msa1065240:CDS |
| CCAGAGATCGACAGGACTTC+TGG | 0.356747 | 7_2:+58843025 | Msa1065240:CDS |
| CAACACAATTCAACAGGTTA+AGG | 0.357106 | 7_2:+58839889 | Msa1065240:five_prime_UTR |
| CTTCAGTTATGTTTGGCAAC+TGG | 0.372380 | 7_2:+58844662 | Msa1065240:three_prime_UTR |
| TCTTTCCCTTTGGTAGCTTA+GGG | 0.372466 | 7_2:-58840214 | None:intergenic |
| CTGTTGTTACATTTAACTTC+CGG | 0.377986 | 7_2:+58842855 | Msa1065240:CDS |
| AACAGTGAGACTGTTAAGTT+TGG | 0.381769 | 7_2:+58843285 | Msa1065240:intron |
| CCAATTGCCATTGGAGGTCC+TGG | 0.386522 | 7_2:+58844237 | Msa1065240:CDS |
| TTAATGAAGGCTTTGGAGAT+TGG | 0.387440 | 7_2:+58843417 | Msa1065240:CDS |
| GGAGAAACAAGGTAATGTTT+TGG | 0.390958 | 7_2:-58843001 | None:intergenic |
| TTCTGGAACGGGAACCGGTC+TGG | 0.391463 | 7_2:+58843321 | Msa1065240:CDS |
| CTCACCAATCTCCAATGTTC+AGG | 0.394590 | 7_2:-58840438 | None:intergenic |
| TGTTGTTACATTTAACTTCC+GGG | 0.395703 | 7_2:+58842856 | Msa1065240:CDS |
| AGATACTGGTCATTGGCCTT+TGG | 0.400766 | 7_2:-58842770 | None:intergenic |
| GCAACTGTGATGAATCTTCA+TGG | 0.403570 | 7_2:+58844321 | Msa1065240:CDS |
| TTACTAATATACCTGTTTAA+GGG | 0.403910 | 7_2:-58840327 | None:intergenic |
| GCAACCATTAATGAAGGCTT+TGG | 0.407578 | 7_2:+58843410 | Msa1065240:CDS |
| TCGTACCTTTACAGCTTTGT+CGG | 0.407705 | 7_2:-58843652 | None:intergenic |
| AGCAACAGTTGTGGCTTGTA+AGG | 0.410007 | 7_2:+58843626 | Msa1065240:CDS |
| AGATGGTTTCAATTACATAA+AGG | 0.411347 | 7_2:+58841587 | Msa1065240:CDS |
| CACCTGCACTTGATCAAGTC+TGG | 0.413686 | 7_2:-58841670 | None:intergenic |
| TACCATGGATTCCCTTAAAC+AGG | 0.414228 | 7_2:+58840316 | Msa1065240:CDS |
| AGAGCATTTGTGAACTTATG+AGG | 0.415990 | 7_2:-58842719 | None:intergenic |
| ACAGCAACTGTCTTTCCCTT+TGG | 0.421353 | 7_2:-58840224 | None:intergenic |
| CCATGGTAATGCAGAAGATA+TGG | 0.423304 | 7_2:+58843989 | Msa1065240:CDS |
| GATGAATCTTCATGGATTTG+AGG | 0.427831 | 7_2:+58844329 | Msa1065240:CDS |
| TAACAAAAGGAGGCAGATAC+TGG | 0.428820 | 7_2:-58842784 | None:intergenic |
| GGATGGGATGCTCAAGTTCT+TGG | 0.428911 | 7_2:+58842689 | Msa1065240:CDS |
| GAGTATGAGAAGTAAGAATC+TGG | 0.431285 | 7_2:-58844058 | None:intergenic |
| TCTTAGCGGTAAATTTGATC+AGG | 0.431308 | 7_2:+58843461 | Msa1065240:CDS |
| GGTCACAACGCGCTTGGTGC+TGG | 0.435739 | 7_2:+58840519 | Msa1065240:CDS |
| TGCCCCACCATGTCACCATT+TGG | 0.436909 | 7_2:-58843588 | None:intergenic |
| AAATCAACTTGCAGAATGAC+TGG | 0.438202 | 7_2:+58842651 | Msa1065240:intron |
| CCAGAAGTCCTGTCGATCTC+TGG | 0.438388 | 7_2:-58843025 | None:intergenic |
| ACAGCATCTCCGTCGACTAT+AGG | 0.445604 | 7_2:-58842836 | None:intergenic |
| GGAGGTCCTGGATTGGCTCC+TGG | 0.446044 | 7_2:+58844249 | Msa1065240:CDS |
| AGTTATGTTTGGCAACTGGC+TGG | 0.448984 | 7_2:+58844666 | Msa1065240:three_prime_UTR |
| GGGGTGTTGTGAAGCGTGGA+TGG | 0.450716 | 7_2:+58842672 | Msa1065240:CDS |
| TGCCATTGGAGGTCCTGGAT+TGG | 0.455036 | 7_2:+58844242 | Msa1065240:CDS |
| CGCAACGATGTTCCCACCGG+TGG | 0.455928 | 7_2:+58844282 | Msa1065240:CDS |
| CCAGGACCTCCAATGGCAAT+TGG | 0.459761 | 7_2:-58844237 | None:intergenic |
| GATATGGGTAATAGTGAAGT+TGG | 0.460793 | 7_2:+58840498 | Msa1065240:CDS |
| ACTGGCACATTGCATCTCAT+TGG | 0.465570 | 7_2:+58841621 | Msa1065240:CDS |
| GGTGACATGGTGGGGCATAC+AGG | 0.472436 | 7_2:+58843594 | Msa1065240:CDS |
| CAAACACAACACAATTCAAC+AGG | 0.472490 | 7_2:+58839883 | None:intergenic |
| GAATCTGTTATAAACAAAGA+TGG | 0.474550 | 7_2:+58840157 | Msa1065240:exon |
| GTTGAGATTCCAAGTGACTC+TGG | 0.483060 | 7_2:+58843372 | Msa1065240:CDS |
| TTCCCTAAAATCCGTTATGC+TGG | 0.483311 | 7_2:+58842947 | Msa1065240:CDS |
| CTTGCAAAATTGCGTGAGAA+AGG | 0.491835 | 7_2:+58841894 | Msa1065240:CDS |
| GCCTCTCTCACAACATCGTT+AGG | 0.495608 | 7_2:+58839962 | Msa1065240:five_prime_UTR |
| ATTGATGCACAGATTGCATC+AGG | 0.498147 | 7_2:+58841918 | Msa1065240:CDS |
| CAATGAGCAACCATTAATGA+AGG | 0.499084 | 7_2:+58843404 | Msa1065240:CDS |
| TGGAGATTGGTGAGGGCTCA+TGG | 0.500403 | 7_2:+58840447 | Msa1065240:CDS |
| GGCTTTGGAGATTGGCGAGA+AGG | 0.502528 | 7_2:+58843425 | Msa1065240:CDS |
| CTCTCATCAACAATAACAAA+AGG | 0.513371 | 7_2:-58842797 | None:intergenic |
| CTCATTGGACTGCTGAGTGA+TGG | 0.513603 | 7_2:+58841636 | Msa1065240:CDS |
| GTTAAGGTGCCAATTGCCAT+TGG | 0.515652 | 7_2:+58844228 | Msa1065240:intron |
| TTTGGTAGCTTAGGGTGATC+CGG | 0.517134 | 7_2:-58840206 | None:intergenic |
| TGGAGATTGGCGAGAAGGCA+AGG | 0.517986 | 7_2:+58843430 | Msa1065240:CDS |
| TTTCTCCACCAGAGATCGAC+AGG | 0.519139 | 7_2:+58843017 | Msa1065240:CDS |
| CGATGTTCCCACCGGTGGGT+TGG | 0.522840 | 7_2:+58844287 | Msa1065240:CDS |
| TACCAAATGGTGACATGGTG+GGG | 0.524171 | 7_2:+58843586 | Msa1065240:CDS |
| TTTGTTATTGTTGATGAGAG+TGG | 0.528332 | 7_2:+58842800 | Msa1065240:CDS |
| TGTCACAATGGATCGTTATG+AGG | 0.530211 | 7_2:+58841956 | Msa1065240:CDS |
| GGCTGGAAAACCTTTGCTAA+AGG | 0.530362 | 7_2:+58844025 | Msa1065240:CDS |
| AGGAGGCAGATACTGGTCAT+TGG | 0.531953 | 7_2:-58842777 | None:intergenic |
| GGCAGCCGACAAAGCTGTAA+AGG | 0.535985 | 7_2:+58843647 | Msa1065240:CDS |
| GGAAAACCTTTGCTAAAGGA+TGG | 0.537463 | 7_2:+58844029 | Msa1065240:CDS |
| AATGTTATCCCAGAGTCACT+TGG | 0.538076 | 7_2:-58843381 | None:intergenic |
| GCTGGTCGTATATTTGCTCA+AGG | 0.538202 | 7_2:+58840537 | Msa1065240:CDS |
| CTTCCAACTGAGGATGATAT+GGG | 0.540266 | 7_2:+58840483 | Msa1065240:CDS |
| TGAAGCCATCAAGACATTGA+GGG | 0.541403 | 7_2:+58842742 | Msa1065240:CDS |
| ATACGTGTCAACATACCAAA+TGG | 0.544604 | 7_2:+58843573 | Msa1065240:CDS |
| ATGGTCAAGAGGGACAAGGC+TGG | 0.548538 | 7_2:+58844008 | Msa1065240:CDS |
| CTGACACCAGGAGCCAATCC+AGG | 0.549594 | 7_2:-58844255 | None:intergenic |
| TGCTCCTGAACATTGGAGAT+TGG | 0.550043 | 7_2:+58840434 | Msa1065240:CDS |
| CGATCTCTGGTGGAGAAACA+AGG | 0.551237 | 7_2:-58843012 | None:intergenic |
| CTCCAGACTTGATCAAGTGC+AGG | 0.551379 | 7_2:+58841668 | Msa1065240:CDS |
| GAAGTTGGTCACAACGCGCT+TGG | 0.553020 | 7_2:+58840513 | Msa1065240:CDS |
| AATCTGTTATAAACAAAGAT+GGG | 0.556034 | 7_2:+58840158 | Msa1065240:exon |
| TTGAAGCCATCAAGACATTG+AGG | 0.561074 | 7_2:+58842741 | Msa1065240:CDS |
| AGCTACGTTGGCCAACCCAC+CGG | 0.561843 | 7_2:-58844298 | None:intergenic |
| AAGGTGCCAATTGCCATTGG+AGG | 0.563279 | 7_2:+58844231 | Msa1065240:intron |
| TAAATTGCTGTATTAGTCTG+CGG | 0.563559 | 7_2:+58844495 | Msa1065240:three_prime_UTR |
| GGAGATTGGCGAGAAGGCAA+GGG | 0.563927 | 7_2:+58843431 | Msa1065240:CDS |
| GCACAGATTGCATCAGGTGG+AGG | 0.564406 | 7_2:+58841924 | Msa1065240:CDS |
| TACCTGTTTAAGGGAATCCA+TGG | 0.566051 | 7_2:-58840318 | None:intergenic |
| GACATTGAGGGCAGCACCAA+AGG | 0.566064 | 7_2:+58842754 | Msa1065240:CDS |
| GAAGTCCTGTCGATCTCTGG+TGG | 0.566154 | 7_2:-58843022 | None:intergenic |
| CGTCTCCATATTCTTACTGA+TGG | 0.566206 | 7_2:+58841816 | Msa1065240:CDS |
| TACGTTGGCCAACCCACCGG+TGG | 0.566568 | 7_2:-58844295 | None:intergenic |
| TTGAGATTCCAAGTGACTCT+GGG | 0.569734 | 7_2:+58843373 | Msa1065240:CDS |
| TCGTATGACTATGCTTGCTA+AGG | 0.572285 | 7_2:+58842883 | Msa1065240:CDS |
| AGGGCTCATGGTAAAGCAGT+AGG | 0.575310 | 7_2:+58840459 | Msa1065240:CDS |
| AATCAACTTGCAGAATGACT+GGG | 0.575871 | 7_2:+58842652 | Msa1065240:intron |
| TCTCATCAAAATATCCAGAC+CGG | 0.576005 | 7_2:-58843335 | None:intergenic |
| ATACCAAATGGTGACATGGT+GGG | 0.577688 | 7_2:+58843585 | Msa1065240:CDS |
| GCAACGATGTTCCCACCGGT+GGG | 0.580025 | 7_2:+58844283 | Msa1065240:CDS |
| AGCCAATCCAGGACCTCCAA+TGG | 0.580715 | 7_2:-58844244 | None:intergenic |
| GGGTGTTGTGAAGCGTGGAT+GGG | 0.582040 | 7_2:+58842673 | Msa1065240:CDS |
| CTGAACATTGGAGATTGGTG+AGG | 0.584509 | 7_2:+58840439 | Msa1065240:CDS |
| CTTAAAGGAGCTAGCGAGCG+AGG | 0.588541 | 7_2:+58841780 | Msa1065240:CDS |
| GCATAGTCATACGATCTGCC+CGG | 0.589819 | 7_2:-58842874 | None:intergenic |
| CAACGCTGAAACACCTACCA+TGG | 0.590025 | 7_2:+58840301 | Msa1065240:CDS |
| GCAAGGGATGCAATTCTTAG+CGG | 0.592103 | 7_2:+58843447 | Msa1065240:CDS |
| TGCAGAAGATATGGTCAAGA+GGG | 0.593650 | 7_2:+58843998 | Msa1065240:CDS |
| TTACCCATATCATCCTCAGT+TGG | 0.593902 | 7_2:-58840486 | None:intergenic |
| GATCACCCTAAGCTACCAAA+GGG | 0.594226 | 7_2:+58840209 | Msa1065240:CDS |
| CATCACAGTTGCAGCTACGT+TGG | 0.596130 | 7_2:-58844310 | None:intergenic |
| ATTGGACTGCTGAGTGATGG+AGG | 0.601224 | 7_2:+58841639 | Msa1065240:CDS |
| CATACCAAATGGTGACATGG+TGG | 0.606564 | 7_2:+58843584 | Msa1065240:CDS |
| TTCCGCAACGATGTTCCCAC+CGG | 0.606749 | 7_2:+58844279 | Msa1065240:CDS |
| TGAACATTGGAGATTGGTGA+GGG | 0.608444 | 7_2:+58840440 | Msa1065240:CDS |
| ATTCGAGCATACCAGCATAA+CGG | 0.610168 | 7_2:-58842958 | None:intergenic |
| AGAGTTGTCTCATAGTCACT+TGG | 0.611671 | 7_2:-58844354 | None:intergenic |
| CAACATACCAAATGGTGACA+TGG | 0.612215 | 7_2:+58843581 | Msa1065240:CDS |
| GACTGGGGTGTTGTGAAGCG+TGG | 0.613541 | 7_2:+58842668 | Msa1065240:CDS |
| TGTTTAAGGGAATCCATGGT+AGG | 0.617690 | 7_2:-58840314 | None:intergenic |
| TGTAGGGTGCTCCTGAACAT+TGG | 0.618822 | 7_2:+58840427 | Msa1065240:intron |
| GCTGGTATGCTCGAATATGA+TGG | 0.622683 | 7_2:+58842965 | Msa1065240:CDS |
| TGACATTGAAGCAACAGTTG+TGG | 0.622685 | 7_2:+58843617 | Msa1065240:CDS |
| ACCTAACGATGTTGTGAGAG+AGG | 0.623906 | 7_2:-58839963 | None:intergenic |
| CAAAAGTCCACAAACAAGTG+TGG | 0.628067 | 7_2:-58844468 | None:intergenic |
| TCTTGACGCAATTGAGCAAG+TGG | 0.628618 | 7_2:+58843941 | Msa1065240:CDS |
| GACGCAATTGAGCAAGTGGG+TGG | 0.633330 | 7_2:+58843945 | Msa1065240:CDS |
| CCATATCTTCTGCATTACCA+TGG | 0.633988 | 7_2:-58843989 | None:intergenic |
| ATGCAGAAGATATGGTCAAG+AGG | 0.636234 | 7_2:+58843997 | Msa1065240:CDS |
| TCTGTTGGTCCTATAGTCGA+CGG | 0.637014 | 7_2:+58842827 | Msa1065240:CDS |
| TCATCAACAATAACAAAAGG+AGG | 0.644114 | 7_2:-58842794 | None:intergenic |
| GATGAGAGTGGAAAATCTGT+TGG | 0.645227 | 7_2:+58842812 | Msa1065240:CDS |
| CTTGACGCAATTGAGCAAGT+GGG | 0.650945 | 7_2:+58843942 | Msa1065240:CDS |
| GGATCACCCTAAGCTACCAA+AGG | 0.651509 | 7_2:+58840208 | Msa1065240:CDS |
| CTGGTCGTATATTTGCTCAA+GGG | 0.654046 | 7_2:+58840538 | Msa1065240:CDS |
| TCGTTGCGGAATCTGACACC+AGG | 0.655685 | 7_2:-58844267 | None:intergenic |
| CACCGGTGGGAACATCGTTG+CGG | 0.658913 | 7_2:-58844281 | None:intergenic |
| AGATATGGTCAAGAGGGACA+AGG | 0.667213 | 7_2:+58844004 | Msa1065240:CDS |
| AAGTCCACAAACAAGTGTGG+AGG | 0.667381 | 7_2:-58844465 | None:intergenic |
| ACGTTGGCCAACCCACCGGT+GGG | 0.670240 | 7_2:-58844294 | None:intergenic |
| ATCAACTTGCAGAATGACTG+GGG | 0.675981 | 7_2:+58842653 | Msa1065240:intron |
| CATCAGTAAGAATATGGAGA+CGG | 0.682014 | 7_2:-58841815 | None:intergenic |
| TATGTTGTGACTGCTGACCA+TGG | 0.691967 | 7_2:+58843972 | Msa1065240:CDS |
| GGAAACGTACTCTATCAAAG+TGG | 0.700257 | 7_2:-58842928 | None:intergenic |
| GATGCACAGATTGCATCAGG+TGG | 0.709624 | 7_2:+58841921 | Msa1065240:CDS |
| AGCAGTAGGACTTCCAACTG+AGG | 0.710284 | 7_2:+58840473 | Msa1065240:CDS |
| AGGTCGCATGAATGTCACAA+TGG | 0.722117 | 7_2:+58841944 | Msa1065240:CDS |
| CTGTTACACAAATGTCACAG+AGG | 0.742719 | 7_2:-58839931 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATTAAATTAAACTAAAC+AGG | - | chr7_2:58840067-58840086 | None:intergenic | 10.0% |
| !!! | TATATTAGTAATCTTTTTTT+TGG | + | chr7_2:58840339-58840358 | Msa1065240:intron | 10.0% |
| !! | TAATTATATACTAATCTAAA+GGG | + | chr7_2:58840646-58840665 | Msa1065240:intron | 10.0% |
| !! | CAAAAAAAAAACAAAAAAAT+AGG | - | chr7_2:58841154-58841173 | None:intergenic | 10.0% |
| !! | GTAATTATATACTAATCTAA+AGG | + | chr7_2:58840645-58840664 | Msa1065240:intron | 15.0% |
| !! | TGTTAACATATTAAATGAAA+TGG | - | chr7_2:58842002-58842021 | None:intergenic | 15.0% |
| !! | AAAAAAGAAAGAATAGTTAA+CGG | + | chr7_2:58842087-58842106 | Msa1065240:intron | 15.0% |
| !! | TCAATAAACAGAATAAAATT+GGG | - | chr7_2:58842295-58842314 | None:intergenic | 15.0% |
| !! | TTCAATAAACAGAATAAAAT+TGG | - | chr7_2:58842296-58842315 | None:intergenic | 15.0% |
| !! | TCAATAAACAGAATAAAATT+GGG | - | chr7_2:58842295-58842314 | None:intergenic | 15.0% |
| !! | TTCAATAAACAGAATAAAAT+TGG | - | chr7_2:58842296-58842315 | None:intergenic | 15.0% |
| !! | TTAAACTAAACAGGTTAATT+TGG | - | chr7_2:58840058-58840077 | None:intergenic | 20.0% |
| !! | AATCTGTTATAAACAAAGAT+GGG | + | chr7_2:58840158-58840177 | Msa1065240:exon | 20.0% |
| !! | TTACTAATATACCTGTTTAA+GGG | - | chr7_2:58840330-58840349 | None:intergenic | 20.0% |
| !! | ATTACTAATATACCTGTTTA+AGG | - | chr7_2:58840331-58840350 | None:intergenic | 20.0% |
| !!! | TCTTTTTTTTGGATTCAATA+TGG | + | chr7_2:58840350-58840369 | Msa1065240:intron | 20.0% |
| !!! | AAATTGTTTTGTTATGTTGT+AGG | + | chr7_2:58840410-58840429 | Msa1065240:intron | 20.0% |
| !!! | AATTGTTTTGTTATGTTGTA+GGG | + | chr7_2:58840411-58840430 | Msa1065240:intron | 20.0% |
| !! | AAAACACTTTCAAAAAGAAA+AGG | - | chr7_2:58840990-58841009 | None:intergenic | 20.0% |
| !! | ATGTTTGAAAGAAACAAAAT+TGG | - | chr7_2:58841117-58841136 | None:intergenic | 20.0% |
| !!! | TTTTGTTTCTTTCAAACATT+TGG | + | chr7_2:58841118-58841137 | Msa1065240:intron | 20.0% |
| !!! | TTTGTTTTTTTTTTGTGTCA+TGG | + | chr7_2:58841159-58841178 | Msa1065240:intron | 20.0% |
| !! | TAACATATTAAATGAAATGG+TGG | - | chr7_2:58841999-58842018 | None:intergenic | 20.0% |
| !! | ATTAAACGTAGTTTACTATA+TGG | + | chr7_2:58842132-58842151 | Msa1065240:intron | 20.0% |
| !! | ATCAGTAAAAAAAAGAAACT+AGG | - | chr7_2:58842243-58842262 | None:intergenic | 20.0% |
| !!! | TTTTTGTTGTATTACCATAT+TGG | + | chr7_2:58842387-58842406 | Msa1065240:intron | 20.0% |
| !! | TCAAGTCAACAAAATTTATT+TGG | - | chr7_2:58842576-58842595 | None:intergenic | 20.0% |
| !! | AATAGTAGTTTCATATAGAA+TGG | - | chr7_2:58843173-58843192 | None:intergenic | 20.0% |
| !!! | ACTTAATTTTTGAAATTTGC+TGG | + | chr7_2:58843675-58843694 | Msa1065240:intron | 20.0% |
| !!! | CTTAATTTTTGAAATTTGCT+GGG | + | chr7_2:58843676-58843695 | Msa1065240:intron | 20.0% |
| !! | AAATACACAGTATTATTACA+AGG | - | chr7_2:58843905-58843924 | None:intergenic | 20.0% |
| !!! | TTTTGTACTTTTGTTTGTTA+AGG | + | chr7_2:58844212-58844231 | Msa1065240:intron | 20.0% |
| !!! | TACAAACTTAGAATACTTTT+TGG | + | chr7_2:58844614-58844633 | Msa1065240:three_prime_UTR | 20.0% |
| !! | AAAAGACAACAAAACAAAAA+AGG | - | chr7_2:58844697-58844716 | None:intergenic | 20.0% |
| ! | GAATCTGTTATAAACAAAGA+TGG | + | chr7_2:58840157-58840176 | Msa1065240:exon | 25.0% |
| ! | AATAAGTTGTTTATCCAAAC+AGG | - | chr7_2:58840672-58840691 | None:intergenic | 25.0% |
| !!! | TAAGTTTTGTGAGACTATTT+GGG | - | chr7_2:58840813-58840832 | None:intergenic | 25.0% |
| !!! | ATAAGTTTTGTGAGACTATT+TGG | - | chr7_2:58840814-58840833 | None:intergenic | 25.0% |
| !! | TAATTTTTGCCTGTTTAGAT+TGG | - | chr7_2:58840860-58840879 | None:intergenic | 25.0% |
| ! | TTATTTATTCACCTATGTCT+TGG | + | chr7_2:58841015-58841034 | Msa1065240:intron | 25.0% |
| ! | CTTAGAGTAATTCAAGAAAA+AGG | - | chr7_2:58841229-58841248 | None:intergenic | 25.0% |
| ! | GTCAATATGCATATACAATA+TGG | - | chr7_2:58841454-58841473 | None:intergenic | 25.0% |
| ! | AGATGGTTTCAATTACATAA+AGG | + | chr7_2:58841587-58841606 | Msa1065240:CDS | 25.0% |
| !!! | ATAAAGGAAAGTTTTGAAAC+TGG | + | chr7_2:58841603-58841622 | Msa1065240:CDS | 25.0% |
| ! | ATAGTTAGTTAGAACAAAGA+AGG | - | chr7_2:58841744-58841763 | None:intergenic | 25.0% |
| !! | TTTTGCAAGATCATTTTCAA+GGG | - | chr7_2:58841883-58841902 | None:intergenic | 25.0% |
| !! | ATTTTGCAAGATCATTTTCA+AGG | - | chr7_2:58841884-58841903 | None:intergenic | 25.0% |
| !! | TTTTCTGTTATTATGCATTC+TGG | + | chr7_2:58842044-58842063 | Msa1065240:intron | 25.0% |
| ! | AAAACAGTCATGATTTCTTA+GGG | - | chr7_2:58842451-58842470 | None:intergenic | 25.0% |
| ! | TAAAACAGTCATGATTTCTT+AGG | - | chr7_2:58842452-58842471 | None:intergenic | 25.0% |
| !! | GTTATTAGATTTCCTTTTTG+TGG | + | chr7_2:58842517-58842536 | Msa1065240:intron | 25.0% |
| ! | TACAAAACAAAACCACAAAA+AGG | - | chr7_2:58842532-58842551 | None:intergenic | 25.0% |
| ! | GGTGAATATTTAGTCAAAAA+TGG | + | chr7_2:58843046-58843065 | Msa1065240:CDS | 25.0% |
| ! | TTATCACCTATTTAATCTGT+TGG | + | chr7_2:58843095-58843114 | Msa1065240:intron | 25.0% |
| ! | AGAAAACCAACAGATTAAAT+AGG | - | chr7_2:58843104-58843123 | None:intergenic | 25.0% |
| !!! | AAATGTTTGCTTTTGAATGA+TGG | + | chr7_2:58843232-58843251 | Msa1065240:intron | 25.0% |
| ! | AATTTGATCAGGTAAGTAAA+TGG | + | chr7_2:58843472-58843491 | Msa1065240:intron | 25.0% |
| !! | TATTTAAATACAGCACTGAA+AGG | - | chr7_2:58843825-58843844 | None:intergenic | 25.0% |
| ! | TATTAGGTAGTAAAACTTAC+TGG | - | chr7_2:58844089-58844108 | None:intergenic | 25.0% |
| ! | GTCGGAACTAATTATATATT+AGG | - | chr7_2:58844105-58844124 | None:intergenic | 25.0% |
| !! | TCTTTTACTTCAGTTATGTT+TGG | + | chr7_2:58844655-58844674 | Msa1065240:three_prime_UTR | 25.0% |
| ! | AATTCAACAGGTTAAGGTTT+TGG | + | chr7_2:58839895-58839914 | Msa1065240:five_prime_UTR | 30.0% |
| ! | CCTCATCATTGATAATATCT+AGG | - | chr7_2:58840103-58840122 | None:intergenic | 30.0% |
| CCTAGATATTATCAATGATG+AGG | + | chr7_2:58840100-58840119 | Msa1065240:intron | 30.0% | |
| !! | TGAGGTTTGTTGTTGATTTA+TGG | + | chr7_2:58840118-58840137 | Msa1065240:intron | 30.0% |
| ! | TGATTTTTCATGGAAACTAC+CGG | + | chr7_2:58840187-58840206 | Msa1065240:CDS | 30.0% |
| !!! | TGTTATTGTTTTGGATGGTT+GGG | + | chr7_2:58840244-58840263 | Msa1065240:CDS | 30.0% |
| !!! | GTTAGATCTATTGCTGTTTT+AGG | + | chr7_2:58840372-58840391 | Msa1065240:intron | 30.0% |
| GCTTATAATTTCGATCTGTT+TGG | + | chr7_2:58840573-58840592 | Msa1065240:intron | 30.0% | |
| TAATTTCGATCTGTTTGGTT+TGG | + | chr7_2:58840578-58840597 | Msa1065240:intron | 30.0% | |
| TATTGCAAGCAAAATACATG+CGG | - | chr7_2:58840606-58840625 | None:intergenic | 30.0% | |
| ACAAGTGCTTATCATGATAA+TGG | + | chr7_2:58840705-58840724 | Msa1065240:intron | 30.0% | |
| TCAAATAAGCCAATCTAAAC+AGG | + | chr7_2:58840848-58840867 | Msa1065240:intron | 30.0% | |
| AAGTTAATTGCTCATGTTCA+CGG | + | chr7_2:58840915-58840934 | Msa1065240:intron | 30.0% | |
| !!! | TTCACGGCTAATTTAGTTTT+AGG | + | chr7_2:58840931-58840950 | Msa1065240:intron | 30.0% |
| TGCTTCTTGATTTACAATAC+TGG | + | chr7_2:58841081-58841100 | Msa1065240:intron | 30.0% | |
| AGAACAAGACATAGCAATAA+CGG | - | chr7_2:58841197-58841216 | None:intergenic | 30.0% | |
| GAGTAATTCAAGAAAAAGGA+TGG | - | chr7_2:58841225-58841244 | None:intergenic | 30.0% | |
| !!! | CTCATGCATAGTTTAGTTTT+AGG | + | chr7_2:58841277-58841296 | Msa1065240:intron | 30.0% |
| ! | ATGAATAGTCAACTTGTTTG+TGG | + | chr7_2:58841306-58841325 | Msa1065240:intron | 30.0% |
| TTCTTTCCAAACATTAGGAT+TGG | + | chr7_2:58841387-58841406 | Msa1065240:intron | 30.0% | |
| TCTTTCCAAACATTAGGATT+GGG | + | chr7_2:58841388-58841407 | Msa1065240:intron | 30.0% | |
| AAGAATTAGCGAAACATTTC+AGG | - | chr7_2:58841431-58841450 | None:intergenic | 30.0% | |
| ! | TTTGTACAGTTGTTGCTTAA+AGG | + | chr7_2:58841765-58841784 | Msa1065240:intron | 30.0% |
| TTACTATATGGTGTCTGATT+AGG | + | chr7_2:58842144-58842163 | Msa1065240:intron | 30.0% | |
| TAACCGAAGGATTCAAATTA+TGG | + | chr7_2:58842470-58842489 | Msa1065240:intron | 30.0% | |
| TCACCATAATTTGAATCCTT+CGG | - | chr7_2:58842476-58842495 | None:intergenic | 30.0% | |
| TCATCAACAATAACAAAAGG+AGG | - | chr7_2:58842797-58842816 | None:intergenic | 30.0% | |
| CTCTCATCAACAATAACAAA+AGG | - | chr7_2:58842800-58842819 | None:intergenic | 30.0% | |
| !! | TTTGTTATTGTTGATGAGAG+TGG | + | chr7_2:58842800-58842819 | Msa1065240:CDS | 30.0% |
| ! | CTGTTGTTACATTTAACTTC+CGG | + | chr7_2:58842855-58842874 | Msa1065240:CDS | 30.0% |
| ! | TGTTGTTACATTTAACTTCC+GGG | + | chr7_2:58842856-58842875 | Msa1065240:CDS | 30.0% |
| ! | TTTGACTGTAGTTTTTACGT+TGG | + | chr7_2:58843192-58843211 | Msa1065240:intron | 30.0% |
| ! | TTGACTGTAGTTTTTACGTT+GGG | + | chr7_2:58843193-58843212 | Msa1065240:intron | 30.0% |
| !!! | TGGATATTTTGATGAGAAAC+TGG | + | chr7_2:58843341-58843360 | Msa1065240:CDS | 30.0% |
| !!! | ATATTTTGATGAGAAACTGG+AGG | + | chr7_2:58843344-58843363 | Msa1065240:CDS | 30.0% |
| !! | GGTAAGTAAATGGATTATCT+CGG | + | chr7_2:58843482-58843501 | Msa1065240:intron | 30.0% |
| !! | GTAAGTAAATGGATTATCTC+GGG | + | chr7_2:58843483-58843502 | Msa1065240:intron | 30.0% |
| ! | TAAATTGCTGTATTAGTCTG+CGG | + | chr7_2:58844495-58844514 | Msa1065240:three_prime_UTR | 30.0% |
| AGTTGTGCTGAATAATAATC+AGG | + | chr7_2:58844569-58844588 | Msa1065240:intron | 30.0% | |
| AGTATTTGATTGACAATGCT+AGG | - | chr7_2:58844595-58844614 | None:intergenic | 30.0% | |
| CAACACAATTCAACAGGTTA+AGG | + | chr7_2:58839889-58839908 | Msa1065240:five_prime_UTR | 35.0% | |
| !! | GACAGTTGCTGTTATTGTTT+TGG | + | chr7_2:58840235-58840254 | Msa1065240:CDS | 35.0% |
| !!! | GTTGCTGTTATTGTTTTGGA+TGG | + | chr7_2:58840239-58840258 | Msa1065240:CDS | 35.0% |
| !!! | CTGTTATTGTTTTGGATGGT+TGG | + | chr7_2:58840243-58840262 | Msa1065240:CDS | 35.0% |
| !!! | GTTATTGTTTTGGATGGTTG+GGG | + | chr7_2:58840245-58840264 | Msa1065240:CDS | 35.0% |
| GATATGGGTAATAGTGAAGT+TGG | + | chr7_2:58840498-58840517 | Msa1065240:CDS | 35.0% | |
| CTATTTGGGAGAACTAATGA+GGG | - | chr7_2:58840799-58840818 | None:intergenic | 35.0% | |
| ACTATTTGGGAGAACTAATG+AGG | - | chr7_2:58840800-58840819 | None:intergenic | 35.0% | |
| GAAAACTGACATGCATAGTA+AGG | - | chr7_2:58841337-58841356 | None:intergenic | 35.0% | |
| ! | TATGCATGTCAGTTTTCCTA+AGG | + | chr7_2:58841340-58841359 | Msa1065240:intron | 35.0% |
| GGTGATTCTTTCCAAACATT+AGG | + | chr7_2:58841382-58841401 | Msa1065240:intron | 35.0% | |
| ! | GAAACTGGAAAGATTTTCGA+AGG | + | chr7_2:58841564-58841583 | Msa1065240:CDS | 35.0% |
| CATCAGTAAGAATATGGAGA+CGG | - | chr7_2:58841818-58841837 | None:intergenic | 35.0% | |
| TGGGCAGTGTATAATACTAA+TGG | - | chr7_2:58842276-58842295 | None:intergenic | 35.0% | |
| ! | GTTGTATTACCATATTGGCT+CGG | + | chr7_2:58842392-58842411 | Msa1065240:intron | 35.0% |
| !!! | ATCATGACTGTTTTAACCGA+AGG | + | chr7_2:58842457-58842476 | Msa1065240:intron | 35.0% |
| AAATCAACTTGCAGAATGAC+TGG | + | chr7_2:58842651-58842670 | Msa1065240:intron | 35.0% | |
| AATCAACTTGCAGAATGACT+GGG | + | chr7_2:58842652-58842671 | Msa1065240:intron | 35.0% | |
| ! | AGAGCATTTGTGAACTTATG+AGG | - | chr7_2:58842722-58842741 | None:intergenic | 35.0% |
| !!! | TACCAGCATAACGGATTTTA+GGG | - | chr7_2:58842952-58842971 | None:intergenic | 35.0% |
| !!! | ATACCAGCATAACGGATTTT+AGG | - | chr7_2:58842953-58842972 | None:intergenic | 35.0% |
| ! | GGAGAAACAAGGTAATGTTT+TGG | - | chr7_2:58843004-58843023 | None:intergenic | 35.0% |
| AACAGTGAGACTGTTAAGTT+TGG | + | chr7_2:58843285-58843304 | Msa1065240:intron | 35.0% | |
| ! | TTGGTCATGTCACATTTTTC+TGG | + | chr7_2:58843304-58843323 | Msa1065240:CDS | 35.0% |
| !! | CATGTCACATTTTTCTGGAA+CGG | + | chr7_2:58843309-58843328 | Msa1065240:CDS | 35.0% |
| !!! | ATGTCACATTTTTCTGGAAC+GGG | + | chr7_2:58843310-58843329 | Msa1065240:CDS | 35.0% |
| TCTCATCAAAATATCCAGAC+CGG | - | chr7_2:58843338-58843357 | None:intergenic | 35.0% | |
| CAATGAGCAACCATTAATGA+AGG | + | chr7_2:58843404-58843423 | Msa1065240:CDS | 35.0% | |
| ATCTCCAAAGCCTTCATTAA+TGG | - | chr7_2:58843417-58843436 | None:intergenic | 35.0% | |
| !! | TTAATGAAGGCTTTGGAGAT+TGG | + | chr7_2:58843417-58843436 | Msa1065240:CDS | 35.0% |
| TCTTAGCGGTAAATTTGATC+AGG | + | chr7_2:58843461-58843480 | Msa1065240:CDS | 35.0% | |
| ATACGTGTCAACATACCAAA+TGG | + | chr7_2:58843573-58843592 | Msa1065240:CDS | 35.0% | |
| AGGCAATAACACATACTGAA+AGG | - | chr7_2:58843805-58843824 | None:intergenic | 35.0% | |
| TGTTATTGCCCATTAAGTGA+AGG | + | chr7_2:58843866-58843885 | Msa1065240:intron | 35.0% | |
| ! | CTGTTTAGCCTTCACTTAAT+GGG | - | chr7_2:58843877-58843896 | None:intergenic | 35.0% |
| ! | ACTTTTCCATCCTTTAGCAA+AGG | - | chr7_2:58844038-58844057 | None:intergenic | 35.0% |
| GAGTATGAGAAGTAAGAATC+TGG | - | chr7_2:58844061-58844080 | None:intergenic | 35.0% | |
| CTTAACATATACTACATGCG+TGG | + | chr7_2:58844149-58844168 | Msa1065240:intron | 35.0% | |
| GATGAATCTTCATGGATTTG+AGG | + | chr7_2:58844329-58844348 | Msa1065240:CDS | 35.0% | |
| !! | GTTAAGGTTTTGGTCGTGTT+AGG | + | chr7_2:58839905-58839924 | Msa1065240:five_prime_UTR | 40.0% |
| CTGTTACACAAATGTCACAG+AGG | - | chr7_2:58839934-58839953 | None:intergenic | 40.0% | |
| ! | TCTTTCCCTTTGGTAGCTTA+GGG | - | chr7_2:58840217-58840236 | None:intergenic | 40.0% |
| TGTTTAAGGGAATCCATGGT+AGG | - | chr7_2:58840317-58840336 | None:intergenic | 40.0% | |
| TACCATGGATTCCCTTAAAC+AGG | + | chr7_2:58840316-58840335 | Msa1065240:CDS | 40.0% | |
| TACCTGTTTAAGGGAATCCA+TGG | - | chr7_2:58840321-58840340 | None:intergenic | 40.0% | |
| TGAACATTGGAGATTGGTGA+GGG | + | chr7_2:58840440-58840459 | Msa1065240:CDS | 40.0% | |
| ACTTCCAACTGAGGATGATA+TGG | + | chr7_2:58840482-58840501 | Msa1065240:CDS | 40.0% | |
| CTTCCAACTGAGGATGATAT+GGG | + | chr7_2:58840483-58840502 | Msa1065240:CDS | 40.0% | |
| TTACCCATATCATCCTCAGT+TGG | - | chr7_2:58840489-58840508 | None:intergenic | 40.0% | |
| CTGGTCGTATATTTGCTCAA+GGG | + | chr7_2:58840538-58840557 | Msa1065240:CDS | 40.0% | |
| ACTAATCTAAAGGGCCTGTT+TGG | + | chr7_2:58840655-58840674 | Msa1065240:intron | 40.0% | |
| CCAAGTACTTACCAAGACAT+AGG | - | chr7_2:58841029-58841048 | None:intergenic | 40.0% | |
| CCTATGTCTTGGTAAGTACT+TGG | + | chr7_2:58841026-58841045 | Msa1065240:intron | 40.0% | |
| CGATGCGTCATAAATGTAAC+CGG | + | chr7_2:58841053-58841072 | Msa1065240:intron | 40.0% | |
| !! | TAAATCAAGAAGCACCACAC+CGG | - | chr7_2:58841075-58841094 | None:intergenic | 40.0% |
| AACTAAACTATGCATGAGCG+AGG | - | chr7_2:58841275-58841294 | None:intergenic | 40.0% | |
| ACATAAGAACGTGAGTCCTT+AGG | - | chr7_2:58841359-58841378 | None:intergenic | 40.0% | |
| AGGACTCACGTTCTTATGTT+TGG | + | chr7_2:58841360-58841379 | Msa1065240:intron | 40.0% | |
| GGACTCACGTTCTTATGTTT+GGG | + | chr7_2:58841361-58841380 | Msa1065240:intron | 40.0% | |
| CAAGACCCAATCCTAATGTT+TGG | - | chr7_2:58841396-58841415 | None:intergenic | 40.0% | |
| TTCCTAGCACATGTGATGAT+TGG | + | chr7_2:58841486-58841505 | Msa1065240:intron | 40.0% | |
| TCCTAGCACATGTGATGATT+GGG | + | chr7_2:58841487-58841506 | Msa1065240:intron | 40.0% | |
| ATGTGATGATTGGGATGTAC+TGG | + | chr7_2:58841496-58841515 | Msa1065240:intron | 40.0% | |
| !! | GTTGACATTGCTCTAGAAAC+TGG | + | chr7_2:58841549-58841568 | Msa1065240:CDS | 40.0% |
| ! | GGAAAGATTTTCGAAGGAGA+TGG | + | chr7_2:58841570-58841589 | Msa1065240:CDS | 40.0% |
| CGTCTCCATATTCTTACTGA+TGG | + | chr7_2:58841816-58841835 | Msa1065240:CDS | 40.0% | |
| CACGACCATCAGTAAGAATA+TGG | - | chr7_2:58841824-58841843 | None:intergenic | 40.0% | |
| ! | TACTGATGGTCGTGATGTTT+TGG | + | chr7_2:58841830-58841849 | Msa1065240:CDS | 40.0% |
| CTTGCAAAATTGCGTGAGAA+AGG | + | chr7_2:58841894-58841913 | Msa1065240:CDS | 40.0% | |
| ATTGATGCACAGATTGCATC+AGG | + | chr7_2:58841918-58841937 | Msa1065240:CDS | 40.0% | |
| TGTCACAATGGATCGTTATG+AGG | + | chr7_2:58841956-58841975 | Msa1065240:CDS | 40.0% | |
| TGGGCAGTGTATAAGACTAA+TGG | - | chr7_2:58842337-58842356 | None:intergenic | 40.0% | |
| ATCAAACTTCCGAGCCAATA+TGG | - | chr7_2:58842404-58842423 | None:intergenic | 40.0% | |
| ! | TGGCTCGGAAGTTTGATAAA+AGG | + | chr7_2:58842407-58842426 | Msa1065240:intron | 40.0% |
| ATCAACTTGCAGAATGACTG+GGG | + | chr7_2:58842653-58842672 | Msa1065240:intron | 40.0% | |
| TTGAAGCCATCAAGACATTG+AGG | + | chr7_2:58842741-58842760 | Msa1065240:CDS | 40.0% | |
| TGAAGCCATCAAGACATTGA+GGG | + | chr7_2:58842742-58842761 | Msa1065240:CDS | 40.0% | |
| TAACAAAAGGAGGCAGATAC+TGG | - | chr7_2:58842787-58842806 | None:intergenic | 40.0% | |
| GATGAGAGTGGAAAATCTGT+TGG | + | chr7_2:58842812-58842831 | Msa1065240:CDS | 40.0% | |
| ! | TCGTATGACTATGCTTGCTA+AGG | + | chr7_2:58842883-58842902 | Msa1065240:CDS | 40.0% |
| GGAAACGTACTCTATCAAAG+TGG | - | chr7_2:58842931-58842950 | None:intergenic | 40.0% | |
| TTCCCTAAAATCCGTTATGC+TGG | + | chr7_2:58842947-58842966 | Msa1065240:CDS | 40.0% | |
| ATTCGAGCATACCAGCATAA+CGG | - | chr7_2:58842961-58842980 | None:intergenic | 40.0% | |
| TTGAGATTCCAAGTGACTCT+GGG | + | chr7_2:58843373-58843392 | Msa1065240:CDS | 40.0% | |
| AATGTTATCCCAGAGTCACT+TGG | - | chr7_2:58843384-58843403 | None:intergenic | 40.0% | |
| GCAACCATTAATGAAGGCTT+TGG | + | chr7_2:58843410-58843429 | Msa1065240:CDS | 40.0% | |
| !! | AGTAAATGGATTATCTCGGG+TGG | + | chr7_2:58843486-58843505 | Msa1065240:intron | 40.0% |
| CAACATACCAAATGGTGACA+TGG | + | chr7_2:58843581-58843600 | Msa1065240:CDS | 40.0% | |
| ATACCAAATGGTGACATGGT+GGG | + | chr7_2:58843585-58843604 | Msa1065240:CDS | 40.0% | |
| TGACATTGAAGCAACAGTTG+TGG | + | chr7_2:58843617-58843636 | Msa1065240:CDS | 40.0% | |
| ! | TCGTACCTTTACAGCTTTGT+CGG | - | chr7_2:58843655-58843674 | None:intergenic | 40.0% |
| GGGCAATAACACATACTGAA+AGG | - | chr7_2:58843857-58843876 | None:intergenic | 40.0% | |
| ! | GCTGTTTAGCCTTCACTTAA+TGG | - | chr7_2:58843878-58843897 | None:intergenic | 40.0% |
| CCATATCTTCTGCATTACCA+TGG | - | chr7_2:58843992-58844011 | None:intergenic | 40.0% | |
| ! | CCATGGTAATGCAGAAGATA+TGG | + | chr7_2:58843989-58844008 | Msa1065240:CDS | 40.0% |
| ATGCAGAAGATATGGTCAAG+AGG | + | chr7_2:58843997-58844016 | Msa1065240:CDS | 40.0% | |
| TGCAGAAGATATGGTCAAGA+GGG | + | chr7_2:58843998-58844017 | Msa1065240:CDS | 40.0% | |
| GGAAAACCTTTGCTAAAGGA+TGG | + | chr7_2:58844029-58844048 | Msa1065240:CDS | 40.0% | |
| TTCCGACTATGCATTCAGTT+CGG | + | chr7_2:58844118-58844137 | Msa1065240:intron | 40.0% | |
| GCAACTGTGATGAATCTTCA+TGG | + | chr7_2:58844321-58844340 | Msa1065240:CDS | 40.0% | |
| AGAGTTGTCTCATAGTCACT+TGG | - | chr7_2:58844357-58844376 | None:intergenic | 40.0% | |
| CAAAAGTCCACAAACAAGTG+TGG | - | chr7_2:58844471-58844490 | None:intergenic | 40.0% | |
| CTTCAGTTATGTTTGGCAAC+TGG | + | chr7_2:58844662-58844681 | Msa1065240:three_prime_UTR | 40.0% | |
| ACCTAACGATGTTGTGAGAG+AGG | - | chr7_2:58839966-58839985 | None:intergenic | 45.0% | |
| !!! | TGGGCAGCACTGATTTTTCA+TGG | + | chr7_2:58840177-58840196 | Msa1065240:CDS | 45.0% |
| ! | TTTGGTAGCTTAGGGTGATC+CGG | - | chr7_2:58840209-58840228 | None:intergenic | 45.0% |
| GATCACCCTAAGCTACCAAA+GGG | + | chr7_2:58840209-58840228 | Msa1065240:CDS | 45.0% | |
| ! | GTCTTTCCCTTTGGTAGCTT+AGG | - | chr7_2:58840218-58840237 | None:intergenic | 45.0% |
| ACAGCAACTGTCTTTCCCTT+TGG | - | chr7_2:58840227-58840246 | None:intergenic | 45.0% | |
| TGCTCCTGAACATTGGAGAT+TGG | + | chr7_2:58840434-58840453 | Msa1065240:CDS | 45.0% | |
| CTCACCAATCTCCAATGTTC+AGG | - | chr7_2:58840441-58840460 | None:intergenic | 45.0% | |
| CTGAACATTGGAGATTGGTG+AGG | + | chr7_2:58840439-58840458 | Msa1065240:CDS | 45.0% | |
| GCTGGTCGTATATTTGCTCA+AGG | + | chr7_2:58840537-58840556 | Msa1065240:CDS | 45.0% | |
| CGTCATAAATGTAACCGGTG+TGG | + | chr7_2:58841058-58841077 | Msa1065240:intron | 45.0% | |
| TCCCAATCATCACATGTGCT+AGG | - | chr7_2:58841491-58841510 | None:intergenic | 45.0% | |
| ACTGGCACATTGCATCTCAT+TGG | + | chr7_2:58841621-58841640 | Msa1065240:CDS | 45.0% | |
| !! | GATGGTCGTGATGTTTTGGA+TGG | + | chr7_2:58841834-58841853 | Msa1065240:CDS | 45.0% |
| !! | TGTTTTGGATGGCTCAAGTG+TGG | + | chr7_2:58841845-58841864 | Msa1065240:CDS | 45.0% |
| !! | GTTTTGGATGGCTCAAGTGT+GGG | + | chr7_2:58841846-58841865 | Msa1065240:CDS | 45.0% |
| AGGTCGCATGAATGTCACAA+TGG | + | chr7_2:58841944-58841963 | Msa1065240:CDS | 45.0% | |
| CTTAAGTTCAGCTCTGCATC+AGG | + | chr7_2:58842169-58842188 | Msa1065240:intron | 45.0% | |
| !! | AGATACTGGTCATTGGCCTT+TGG | - | chr7_2:58842773-58842792 | None:intergenic | 45.0% |
| TCTGTTGGTCCTATAGTCGA+CGG | + | chr7_2:58842827-58842846 | Msa1065240:CDS | 45.0% | |
| GCTGGTATGCTCGAATATGA+TGG | + | chr7_2:58842965-58842984 | Msa1065240:CDS | 45.0% | |
| !!! | CATTTTTCTGGAACGGGAAC+CGG | + | chr7_2:58843316-58843335 | Msa1065240:CDS | 45.0% |
| GTTGAGATTCCAAGTGACTC+TGG | + | chr7_2:58843372-58843391 | Msa1065240:CDS | 45.0% | |
| GCAAGGGATGCAATTCTTAG+CGG | + | chr7_2:58843447-58843466 | Msa1065240:CDS | 45.0% | |
| CATACCAAATGGTGACATGG+TGG | + | chr7_2:58843584-58843603 | Msa1065240:CDS | 45.0% | |
| TACCAAATGGTGACATGGTG+GGG | + | chr7_2:58843586-58843605 | Msa1065240:CDS | 45.0% | |
| ! | AGCAACAGTTGTGGCTTGTA+AGG | + | chr7_2:58843626-58843645 | Msa1065240:CDS | 45.0% |
| TCTTGACGCAATTGAGCAAG+TGG | + | chr7_2:58843941-58843960 | Msa1065240:CDS | 45.0% | |
| CTTGACGCAATTGAGCAAGT+GGG | + | chr7_2:58843942-58843961 | Msa1065240:CDS | 45.0% | |
| TATGTTGTGACTGCTGACCA+TGG | + | chr7_2:58843972-58843991 | Msa1065240:CDS | 45.0% | |
| AGATATGGTCAAGAGGGACA+AGG | + | chr7_2:58844004-58844023 | Msa1065240:CDS | 45.0% | |
| GGCTGGAAAACCTTTGCTAA+AGG | + | chr7_2:58844025-58844044 | Msa1065240:CDS | 45.0% | |
| TCCGACTATGCATTCAGTTC+GGG | + | chr7_2:58844119-58844138 | Msa1065240:intron | 45.0% | |
| ! | GTTAAGGTGCCAATTGCCAT+TGG | + | chr7_2:58844228-58844247 | Msa1065240:intron | 45.0% |
| CATTCCTCCACACTTGTTTG+TGG | + | chr7_2:58844461-58844480 | Msa1065240:three_prime_UTR | 45.0% | |
| AAGTCCACAAACAAGTGTGG+AGG | - | chr7_2:58844468-58844487 | None:intergenic | 45.0% | |
| AGTTATGTTTGGCAACTGGC+TGG | + | chr7_2:58844666-58844685 | Msa1065240:three_prime_UTR | 45.0% | |
| GCCTCTCTCACAACATCGTT+AGG | + | chr7_2:58839962-58839981 | Msa1065240:five_prime_UTR | 50.0% | |
| GGATCACCCTAAGCTACCAA+AGG | + | chr7_2:58840208-58840227 | Msa1065240:CDS | 50.0% | |
| CAACGCTGAAACACCTACCA+TGG | + | chr7_2:58840301-58840320 | Msa1065240:CDS | 50.0% | |
| ! | TGTAGGGTGCTCCTGAACAT+TGG | + | chr7_2:58840427-58840446 | Msa1065240:intron | 50.0% |
| AGGGCTCATGGTAAAGCAGT+AGG | + | chr7_2:58840459-58840478 | Msa1065240:CDS | 50.0% | |
| AGCAGTAGGACTTCCAACTG+AGG | + | chr7_2:58840473-58840492 | Msa1065240:CDS | 50.0% | |
| CTCATTGGACTGCTGAGTGA+TGG | + | chr7_2:58841636-58841655 | Msa1065240:CDS | 50.0% | |
| ATTGGACTGCTGAGTGATGG+AGG | + | chr7_2:58841639-58841658 | Msa1065240:CDS | 50.0% | |
| CTCCAGACTTGATCAAGTGC+AGG | + | chr7_2:58841668-58841687 | Msa1065240:CDS | 50.0% | |
| CACCTGCACTTGATCAAGTC+TGG | - | chr7_2:58841673-58841692 | None:intergenic | 50.0% | |
| ! | TGGCTCAAGTGTGGGTTTTG+TGG | + | chr7_2:58841854-58841873 | Msa1065240:CDS | 50.0% |
| GATGCACAGATTGCATCAGG+TGG | + | chr7_2:58841921-58841940 | Msa1065240:CDS | 50.0% | |
| GGATGGGATGCTCAAGTTCT+TGG | + | chr7_2:58842689-58842708 | Msa1065240:CDS | 50.0% | |
| TGCTGCCCTCAATGTCTTGA+TGG | - | chr7_2:58842750-58842769 | None:intergenic | 50.0% | |
| AGGAGGCAGATACTGGTCAT+TGG | - | chr7_2:58842780-58842799 | None:intergenic | 50.0% | |
| ! | ACAGCATCTCCGTCGACTAT+AGG | - | chr7_2:58842839-58842858 | None:intergenic | 50.0% |
| GCATAGTCATACGATCTGCC+CGG | - | chr7_2:58842877-58842896 | None:intergenic | 50.0% | |
| CGATCTCTGGTGGAGAAACA+AGG | - | chr7_2:58843015-58843034 | None:intergenic | 50.0% | |
| TTTCTCCACCAGAGATCGAC+AGG | + | chr7_2:58843017-58843036 | Msa1065240:CDS | 50.0% | |
| ! | GTGTTCGCACTTTTGCTTGC+AGG | + | chr7_2:58843068-58843087 | Msa1065240:CDS | 50.0% |
| CCCCGAACTGAATGCATAGT+CGG | - | chr7_2:58844123-58844142 | None:intergenic | 50.0% | |
| CCGACTATGCATTCAGTTCG+GGG | + | chr7_2:58844120-58844139 | Msa1065240:intron | 50.0% | |
| ! | AAGGTGCCAATTGCCATTGG+AGG | + | chr7_2:58844231-58844250 | Msa1065240:intron | 50.0% |
| CATCACAGTTGCAGCTACGT+TGG | - | chr7_2:58844313-58844332 | None:intergenic | 50.0% | |
| TGGAGATTGGTGAGGGCTCA+TGG | + | chr7_2:58840447-58840466 | Msa1065240:CDS | 55.0% | |
| ! | GAAGTTGGTCACAACGCGCT+TGG | + | chr7_2:58840513-58840532 | Msa1065240:CDS | 55.0% |
| CTTAAAGGAGCTAGCGAGCG+AGG | + | chr7_2:58841780-58841799 | Msa1065240:CDS | 55.0% | |
| GCACAGATTGCATCAGGTGG+AGG | + | chr7_2:58841924-58841943 | Msa1065240:CDS | 55.0% | |
| ! | GGGTGTTGTGAAGCGTGGAT+GGG | + | chr7_2:58842673-58842692 | Msa1065240:CDS | 55.0% |
| GACATTGAGGGCAGCACCAA+AGG | + | chr7_2:58842754-58842773 | Msa1065240:CDS | 55.0% | |
| GAAGTCCTGTCGATCTCTGG+TGG | - | chr7_2:58843025-58843044 | None:intergenic | 55.0% | |
| CCAGAAGTCCTGTCGATCTC+TGG | - | chr7_2:58843028-58843047 | None:intergenic | 55.0% | |
| CCAGAGATCGACAGGACTTC+TGG | + | chr7_2:58843025-58843044 | Msa1065240:CDS | 55.0% | |
| !! | GGCTTTGGAGATTGGCGAGA+AGG | + | chr7_2:58843425-58843444 | Msa1065240:CDS | 55.0% |
| TGGAGATTGGCGAGAAGGCA+AGG | + | chr7_2:58843430-58843449 | Msa1065240:CDS | 55.0% | |
| GGAGATTGGCGAGAAGGCAA+GGG | + | chr7_2:58843431-58843450 | Msa1065240:CDS | 55.0% | |
| TGCCCCACCATGTCACCATT+TGG | - | chr7_2:58843591-58843610 | None:intergenic | 55.0% | |
| GGCAGCCGACAAAGCTGTAA+AGG | + | chr7_2:58843647-58843666 | Msa1065240:CDS | 55.0% | |
| GACGCAATTGAGCAAGTGGG+TGG | + | chr7_2:58843945-58843964 | Msa1065240:CDS | 55.0% | |
| ATGGTCAAGAGGGACAAGGC+TGG | + | chr7_2:58844008-58844027 | Msa1065240:CDS | 55.0% | |
| CCAGGACCTCCAATGGCAAT+TGG | - | chr7_2:58844240-58844259 | None:intergenic | 55.0% | |
| CCAATTGCCATTGGAGGTCC+TGG | + | chr7_2:58844237-58844256 | Msa1065240:CDS | 55.0% | |
| TGCCATTGGAGGTCCTGGAT+TGG | + | chr7_2:58844242-58844261 | Msa1065240:CDS | 55.0% | |
| AGCCAATCCAGGACCTCCAA+TGG | - | chr7_2:58844247-58844266 | None:intergenic | 55.0% | |
| TCGTTGCGGAATCTGACACC+AGG | - | chr7_2:58844270-58844289 | None:intergenic | 55.0% | |
| TTCCGCAACGATGTTCCCAC+CGG | + | chr7_2:58844279-58844298 | Msa1065240:CDS | 55.0% | |
| !! | GACTGGGGTGTTGTGAAGCG+TGG | + | chr7_2:58842668-58842687 | Msa1065240:CDS | 60.0% |
| !! | GGGGTGTTGTGAAGCGTGGA+TGG | + | chr7_2:58842672-58842691 | Msa1065240:CDS | 60.0% |
| !! | TTCTGGAACGGGAACCGGTC+TGG | + | chr7_2:58843321-58843340 | Msa1065240:CDS | 60.0% |
| ! | GGTGACATGGTGGGGCATAC+AGG | + | chr7_2:58843594-58843613 | Msa1065240:CDS | 60.0% |
| CTGACACCAGGAGCCAATCC+AGG | - | chr7_2:58844258-58844277 | None:intergenic | 60.0% | |
| CACCGGTGGGAACATCGTTG+CGG | - | chr7_2:58844284-58844303 | None:intergenic | 60.0% | |
| GCAACGATGTTCCCACCGGT+GGG | + | chr7_2:58844283-58844302 | Msa1065240:CDS | 60.0% | |
| AGCTACGTTGGCCAACCCAC+CGG | - | chr7_2:58844301-58844320 | None:intergenic | 60.0% | |
| !! | GGTCACAACGCGCTTGGTGC+TGG | + | chr7_2:58840519-58840538 | Msa1065240:CDS | 65.0% |
| !! | GGAGGTCCTGGATTGGCTCC+TGG | + | chr7_2:58844249-58844268 | Msa1065240:CDS | 65.0% |
| CGCAACGATGTTCCCACCGG+TGG | + | chr7_2:58844282-58844301 | Msa1065240:CDS | 65.0% | |
| CGATGTTCCCACCGGTGGGT+TGG | + | chr7_2:58844287-58844306 | Msa1065240:CDS | 65.0% | |
| ACGTTGGCCAACCCACCGGT+GGG | - | chr7_2:58844297-58844316 | None:intergenic | 65.0% | |
| TACGTTGGCCAACCCACCGG+TGG | - | chr7_2:58844298-58844317 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 58839888 | 58844776 | 58839888 | ID=Msa1065240;Name=Msa1065240 |
| chr7_2 | mRNA | 58839888 | 58844776 | 58839888 | ID=Msa1065240-mRNA-1;Parent=Msa1065240;Name=Msa1065240-mRNA-1;_AED=0.06;_eAED=0.06;_QI=118|1|1|1|0.8|0.63|11|359|556 |
| chr7_2 | exon | 58839888 | 58839983 | 58839888 | ID=Msa1065240-mRNA-1:exon:11160;Parent=Msa1065240-mRNA-1 |
| chr7_2 | exon | 58840154 | 58840337 | 58840154 | ID=Msa1065240-mRNA-1:exon:11161;Parent=Msa1065240-mRNA-1 |
| chr7_2 | exon | 58840432 | 58840559 | 58840432 | ID=Msa1065240-mRNA-1:exon:11162;Parent=Msa1065240-mRNA-1 |
| chr7_2 | exon | 58841539 | 58841689 | 58841539 | ID=Msa1065240-mRNA-1:exon:11163;Parent=Msa1065240-mRNA-1 |
| chr7_2 | exon | 58841774 | 58841977 | 58841774 | ID=Msa1065240-mRNA-1:exon:11164;Parent=Msa1065240-mRNA-1 |
| chr7_2 | exon | 58842665 | 58843089 | 58842665 | ID=Msa1065240-mRNA-1:exon:11165;Parent=Msa1065240-mRNA-1 |
| chr7_2 | exon | 58843290 | 58843482 | 58843290 | ID=Msa1065240-mRNA-1:exon:11166;Parent=Msa1065240-mRNA-1 |
| chr7_2 | exon | 58843573 | 58843668 | 58843573 | ID=Msa1065240-mRNA-1:exon:11167;Parent=Msa1065240-mRNA-1 |
| chr7_2 | exon | 58843936 | 58844088 | 58843936 | ID=Msa1065240-mRNA-1:exon:11168;Parent=Msa1065240-mRNA-1 |
| chr7_2 | exon | 58844234 | 58844579 | 58844234 | ID=Msa1065240-mRNA-1:exon:11169;Parent=Msa1065240-mRNA-1 |
| chr7_2 | exon | 58844605 | 58844776 | 58844605 | ID=Msa1065240-mRNA-1:exon:11170;Parent=Msa1065240-mRNA-1 |
| chr7_2 | five_prime_UTR | 58839888 | 58839983 | 58839888 | ID=Msa1065240-mRNA-1:five_prime_utr;Parent=Msa1065240-mRNA-1 |
| chr7_2 | five_prime_UTR | 58840154 | 58840175 | 58840154 | ID=Msa1065240-mRNA-1:five_prime_utr;Parent=Msa1065240-mRNA-1 |
| chr7_2 | CDS | 58840176 | 58840337 | 58840176 | ID=Msa1065240-mRNA-1:cds;Parent=Msa1065240-mRNA-1 |
| chr7_2 | CDS | 58840432 | 58840559 | 58840432 | ID=Msa1065240-mRNA-1:cds;Parent=Msa1065240-mRNA-1 |
| chr7_2 | CDS | 58841539 | 58841689 | 58841539 | ID=Msa1065240-mRNA-1:cds;Parent=Msa1065240-mRNA-1 |
| chr7_2 | CDS | 58841774 | 58841977 | 58841774 | ID=Msa1065240-mRNA-1:cds;Parent=Msa1065240-mRNA-1 |
| chr7_2 | CDS | 58842665 | 58843089 | 58842665 | ID=Msa1065240-mRNA-1:cds;Parent=Msa1065240-mRNA-1 |
| chr7_2 | CDS | 58843290 | 58843482 | 58843290 | ID=Msa1065240-mRNA-1:cds;Parent=Msa1065240-mRNA-1 |
| chr7_2 | CDS | 58843573 | 58843668 | 58843573 | ID=Msa1065240-mRNA-1:cds;Parent=Msa1065240-mRNA-1 |
| chr7_2 | CDS | 58843936 | 58844088 | 58843936 | ID=Msa1065240-mRNA-1:cds;Parent=Msa1065240-mRNA-1 |
| chr7_2 | CDS | 58844234 | 58844392 | 58844234 | ID=Msa1065240-mRNA-1:cds;Parent=Msa1065240-mRNA-1 |
| chr7_2 | three_prime_UTR | 58844393 | 58844579 | 58844393 | ID=Msa1065240-mRNA-1:three_prime_utr;Parent=Msa1065240-mRNA-1 |
| chr7_2 | three_prime_UTR | 58844605 | 58844776 | 58844605 | ID=Msa1065240-mRNA-1:three_prime_utr;Parent=Msa1065240-mRNA-1 |
| Gene Sequence |
| Protein sequence |
