Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0520850 | XP_003603281.1 | 99.171 | 362 | 3 | 0 | 54 | 415 | 1 | 362 | 0.0 | 755 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0520850 | sp|Q9SZ53|P2C60_ARATH | 79.155 | 355 | 72 | 1 | 54 | 408 | 1 | 353 | 0.0 | 609 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0520850 | G7J9T2 | 99.171 | 362 | 3 | 0 | 54 | 415 | 1 | 362 | 0.0 | 755 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0001830 | Msa0520850 | 0.834468 | 2.945146e-56 | -8.615850e-47 |
Msa0059950 | Msa0520850 | 0.801472 | 8.862546e-49 | -8.615850e-47 |
Msa0072420 | Msa0520850 | 0.800289 | 1.545367e-48 | -8.615850e-47 |
Msa0122530 | Msa0520850 | 0.801612 | 8.295617e-49 | -8.615850e-47 |
Msa0186540 | Msa0520850 | 0.822313 | 2.532143e-53 | -8.615850e-47 |
Msa0190590 | Msa0520850 | 0.830293 | 3.186037e-55 | -8.615850e-47 |
Msa0232790 | Msa0520850 | 0.826415 | 2.746699e-54 | -8.615850e-47 |
Msa0367760 | Msa0520850 | 0.827914 | 1.202279e-54 | -8.615850e-47 |
Msa0385500 | Msa0520850 | 0.845830 | 3.179569e-59 | -8.615850e-47 |
Msa0385740 | Msa0520850 | 0.803170 | 3.962010e-49 | -8.615850e-47 |
Msa0389210 | Msa0520850 | 0.800452 | 1.432014e-48 | -8.615850e-47 |
Msa0398670 | Msa0520850 | 0.806404 | 8.363415e-50 | -8.615850e-47 |
Msa0404630 | Msa0520850 | 0.832671 | 8.275083e-56 | -8.615850e-47 |
Msa0431980 | Msa0520850 | 0.989720 | 2.375817e-179 | -8.615850e-47 |
Msa0256140 | Msa0520850 | 0.809833 | 1.556006e-50 | -8.615850e-47 |
Msa0257490 | Msa0520850 | 0.815614 | 8.446047e-52 | -8.615850e-47 |
Msa0259680 | Msa0520850 | 0.817317 | 3.510998e-52 | -8.615850e-47 |
Msa0272300 | Msa0520850 | 0.844500 | 7.275691e-59 | -8.615850e-47 |
Msa0296790 | Msa0520850 | 0.800162 | 1.640263e-48 | -8.615850e-47 |
Msa0341480 | Msa0520850 | 0.817711 | 2.861584e-52 | -8.615850e-47 |
Msa0520850 | Msa0527540 | 0.806317 | 8.723705e-50 | -8.615850e-47 |
Msa0520850 | Msa0542560 | 0.822590 | 2.183295e-53 | -8.615850e-47 |
Msa0520850 | Msa0588260 | 0.805987 | 1.023692e-49 | -8.615850e-47 |
Msa0520850 | Msa0604290 | 0.819825 | 9.478173e-53 | -8.615850e-47 |
Msa0520850 | Msa0610550 | 0.815435 | 9.256867e-52 | -8.615850e-47 |
Msa0520850 | Msa0769970 | 0.828870 | 7.068634e-55 | -8.615850e-47 |
Msa0520850 | Msa0776560 | 0.809114 | 2.220194e-50 | -8.615850e-47 |
Msa0520850 | Msa0808090 | 0.805855 | 1.091370e-49 | -8.615850e-47 |
Msa0520850 | Msa0930740 | 0.819770 | 9.752150e-53 | -8.615850e-47 |
Msa0520850 | Msa1021520 | 0.804000 | 2.665414e-49 | -8.615850e-47 |
Msa0520850 | Msa1029050 | 0.805369 | 1.380375e-49 | -8.615850e-47 |
Msa0520850 | Msa1059470 | 0.807172 | 5.754969e-50 | -8.615850e-47 |
Msa0520850 | Msa1065240 | 0.802331 | 5.902853e-49 | -8.615850e-47 |
Msa0520850 | Msa1158640 | -0.843820 | 1.107672e-58 | -8.615850e-47 |
Msa0520850 | Msa1238840 | 0.843161 | 1.661163e-58 | -8.615850e-47 |
Msa0520850 | Msa1280340 | 0.832495 | 9.152818e-56 | -8.615850e-47 |
Msa0520850 | Msa1315890 | 0.822463 | 2.337118e-53 | -8.615850e-47 |
Msa0520850 | Msa1341060 | 0.825516 | 4.492052e-54 | -8.615850e-47 |
Msa0520850 | Msa1365800 | 0.802647 | 5.081083e-49 | -8.615850e-47 |
Msa0520850 | Msa1368530 | 0.810572 | 1.078127e-50 | -8.615850e-47 |
Msa0520850 | Msa1368710 | 0.995179 | 9.370989e-214 | -8.615850e-47 |
Msa0520850 | Msa1374830 | 0.966233 | 1.199134e-125 | -8.615850e-47 |
Msa0520850 | Msa1392980 | 0.848387 | 6.333226e-60 | -8.615850e-47 |
Msa0520850 | Msa1457620 | 0.837567 | 4.818000e-57 | -8.615850e-47 |
Msa0520850 | Msa1458090 | 0.832987 | 6.906255e-56 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0520850 | MtrunA17_Chr3g0136811 | 99.171 | 362 | 3 | 0 | 54 | 415 | 1 | 362 | 0.0 | 755 |
Msa0520850 | MtrunA17_Chr1g0150071 | 78.333 | 360 | 76 | 1 | 54 | 413 | 1 | 358 | 0.0 | 595 |
Msa0520850 | MtrunA17_Chr4g0001761 | 76.338 | 355 | 77 | 2 | 54 | 408 | 1 | 348 | 0.0 | 583 |
Msa0520850 | MtrunA17_Chr4g0007811 | 80.795 | 151 | 5 | 1 | 93 | 243 | 54 | 180 | 1.20e-80 | 247 |
Msa0520850 | MtrunA17_Chr5g0407161 | 31.464 | 321 | 152 | 8 | 75 | 384 | 84 | 347 | 3.72e-41 | 149 |
Msa0520850 | MtrunA17_Chr3g0138281 | 30.723 | 332 | 161 | 8 | 74 | 391 | 80 | 356 | 5.36e-39 | 144 |
Msa0520850 | MtrunA17_Chr5g0435721 | 33.942 | 274 | 134 | 7 | 76 | 344 | 192 | 423 | 1.29e-36 | 139 |
Msa0520850 | MtrunA17_Chr1g0194191 | 30.796 | 289 | 131 | 6 | 75 | 344 | 78 | 316 | 1.73e-34 | 132 |
Msa0520850 | MtrunA17_Chr2g0299981 | 31.395 | 344 | 179 | 11 | 77 | 387 | 221 | 540 | 6.21e-34 | 132 |
Msa0520850 | MtrunA17_Chr1g0212961 | 32.278 | 316 | 140 | 11 | 72 | 382 | 91 | 337 | 1.03e-33 | 129 |
Msa0520850 | MtrunA17_Chr1g0150451 | 29.231 | 325 | 160 | 9 | 71 | 390 | 72 | 331 | 1.32e-33 | 128 |
Msa0520850 | MtrunA17_Chr3g0126511 | 30.178 | 338 | 166 | 10 | 71 | 403 | 89 | 361 | 1.52e-33 | 129 |
Msa0520850 | MtrunA17_Chr3g0136711 | 29.526 | 359 | 169 | 13 | 58 | 402 | 8 | 296 | 2.02e-33 | 127 |
Msa0520850 | MtrunA17_Chr2g0293811 | 30.314 | 287 | 129 | 6 | 74 | 340 | 59 | 294 | 1.25e-32 | 126 |
Msa0520850 | MtrunA17_Chr3g0112291 | 33.333 | 276 | 135 | 9 | 76 | 344 | 92 | 325 | 3.38e-31 | 122 |
Msa0520850 | MtrunA17_Chr4g0070871 | 30.523 | 344 | 156 | 14 | 77 | 383 | 207 | 504 | 1.70e-30 | 122 |
Msa0520850 | MtrunA17_Chr3g0105371 | 27.215 | 316 | 157 | 8 | 77 | 383 | 88 | 339 | 2.94e-30 | 119 |
Msa0520850 | MtrunA17_Chr5g0430481 | 30.797 | 276 | 121 | 8 | 77 | 343 | 124 | 338 | 4.87e-30 | 119 |
Msa0520850 | MtrunA17_Chr3g0144111 | 34.759 | 187 | 111 | 4 | 196 | 382 | 52 | 227 | 7.57e-30 | 116 |
Msa0520850 | MtrunA17_Chr3g0105351 | 26.126 | 333 | 171 | 9 | 60 | 383 | 49 | 315 | 8.61e-30 | 117 |
Msa0520850 | MtrunA17_Chr5g0396731 | 33.106 | 293 | 138 | 6 | 67 | 349 | 63 | 307 | 1.03e-29 | 118 |
Msa0520850 | MtrunA17_Chr6g0483411 | 27.469 | 324 | 159 | 9 | 83 | 384 | 51 | 320 | 1.39e-29 | 117 |
Msa0520850 | MtrunA17_Chr3g0127091 | 27.920 | 351 | 186 | 8 | 75 | 400 | 59 | 367 | 3.02e-29 | 117 |
Msa0520850 | MtrunA17_Chr4g0065141 | 34.254 | 181 | 110 | 2 | 211 | 391 | 184 | 355 | 4.60e-28 | 114 |
Msa0520850 | MtrunA17_Chr8g0389921 | 28.947 | 342 | 163 | 9 | 72 | 383 | 144 | 435 | 3.73e-27 | 112 |
Msa0520850 | MtrunA17_Chr1g0171571 | 29.358 | 327 | 157 | 15 | 75 | 389 | 386 | 650 | 1.32e-26 | 112 |
Msa0520850 | MtrunA17_Chr1g0150781 | 29.054 | 296 | 136 | 7 | 77 | 342 | 240 | 491 | 2.24e-26 | 111 |
Msa0520850 | MtrunA17_Chr3g0135961 | 27.986 | 293 | 142 | 7 | 77 | 339 | 231 | 484 | 3.58e-26 | 110 |
Msa0520850 | MtrunA17_Chr4g0050381 | 27.358 | 318 | 154 | 10 | 75 | 383 | 28 | 277 | 5.80e-26 | 106 |
Msa0520850 | MtrunA17_Chr5g0426141 | 28.213 | 319 | 150 | 13 | 75 | 383 | 33 | 282 | 6.27e-26 | 106 |
Msa0520850 | MtrunA17_Chr2g0279151 | 27.358 | 318 | 154 | 10 | 75 | 383 | 32 | 281 | 6.40e-26 | 106 |
Msa0520850 | MtrunA17_Chr3g0115851 | 27.586 | 319 | 152 | 13 | 75 | 383 | 33 | 282 | 1.02e-24 | 102 |
Msa0520850 | MtrunA17_Chr2g0317021 | 35.955 | 178 | 86 | 7 | 213 | 383 | 177 | 333 | 3.03e-21 | 94.0 |
Msa0520850 | MtrunA17_Chr1g0158781 | 30.816 | 331 | 158 | 12 | 75 | 389 | 111 | 386 | 3.70e-21 | 94.4 |
Msa0520850 | MtrunA17_Chr8g0360351 | 26.298 | 289 | 139 | 8 | 100 | 382 | 61 | 281 | 3.34e-20 | 90.1 |
Msa0520850 | MtrunA17_Chr3g0089721 | 25.364 | 343 | 167 | 11 | 105 | 404 | 68 | 364 | 8.47e-19 | 87.4 |
Msa0520850 | MtrunA17_Chr3g0089711 | 27.068 | 266 | 124 | 8 | 105 | 342 | 68 | 291 | 3.70e-18 | 85.5 |
Msa0520850 | MtrunA17_Chr1g0151781 | 28.929 | 280 | 145 | 10 | 81 | 340 | 43 | 288 | 5.80e-18 | 84.7 |
Msa0520850 | MtrunA17_Chr4g0051661 | 23.239 | 284 | 143 | 8 | 105 | 382 | 183 | 397 | 3.27e-16 | 80.1 |
Msa0520850 | MtrunA17_Chr4g0068971 | 34.507 | 142 | 82 | 3 | 253 | 391 | 110 | 243 | 3.42e-16 | 78.2 |
Msa0520850 | MtrunA17_Chr1g0213351 | 26.119 | 268 | 124 | 8 | 104 | 341 | 79 | 302 | 3.60e-16 | 79.7 |
Msa0520850 | MtrunA17_Chr1g0181901 | 25.623 | 281 | 143 | 9 | 86 | 340 | 57 | 297 | 5.38e-16 | 79.3 |
Msa0520850 | MtrunA17_Chr1g0207571 | 25.965 | 285 | 133 | 9 | 88 | 340 | 46 | 284 | 6.04e-16 | 79.0 |
Msa0520850 | MtrunA17_Chr7g0256751 | 26.159 | 302 | 143 | 11 | 105 | 375 | 69 | 321 | 6.97e-16 | 79.3 |
Msa0520850 | MtrunA17_Chr7g0263281 | 25.263 | 285 | 139 | 10 | 86 | 340 | 52 | 292 | 7.69e-16 | 78.6 |
Msa0520850 | MtrunA17_Chr7g0256771 | 25.407 | 307 | 156 | 10 | 88 | 368 | 54 | 313 | 2.83e-15 | 76.3 |
Msa0520850 | MtrunA17_Chr7g0249421 | 27.491 | 291 | 168 | 10 | 79 | 340 | 68 | 344 | 5.21e-15 | 76.6 |
Msa0520850 | MtrunA17_Chr2g0324061 | 28.873 | 284 | 153 | 11 | 81 | 340 | 65 | 323 | 1.49e-14 | 75.1 |
Msa0520850 | MtrunA17_Chr2g0294291 | 24.164 | 269 | 131 | 7 | 104 | 342 | 74 | 299 | 1.92e-14 | 74.3 |
Msa0520850 | MtrunA17_Chr7g0221691 | 27.857 | 280 | 165 | 9 | 83 | 340 | 105 | 369 | 2.34e-14 | 74.7 |
Msa0520850 | MtrunA17_Chr3g0089691 | 26.471 | 238 | 126 | 7 | 213 | 404 | 51 | 285 | 2.50e-14 | 73.2 |
Msa0520850 | MtrunA17_Chr7g0243571 | 24.398 | 332 | 181 | 11 | 66 | 362 | 46 | 342 | 4.66e-14 | 73.6 |
Msa0520850 | MtrunA17_Chr7g0272061 | 27.132 | 258 | 139 | 9 | 105 | 340 | 91 | 321 | 1.28e-13 | 72.0 |
Msa0520850 | MtrunA17_Chr1g0211251 | 26.592 | 267 | 122 | 11 | 104 | 340 | 80 | 302 | 2.03e-13 | 71.2 |
Msa0520850 | MtrunA17_Chr4g0022171 | 28.826 | 281 | 158 | 10 | 81 | 340 | 71 | 330 | 2.46e-13 | 71.6 |
Msa0520850 | MtrunA17_Chr7g0250061 | 23.970 | 267 | 129 | 8 | 104 | 340 | 75 | 297 | 2.66e-13 | 70.9 |
Msa0520850 | MtrunA17_Chr2g0295401 | 27.237 | 257 | 127 | 12 | 107 | 340 | 94 | 313 | 8.11e-13 | 69.3 |
Msa0520850 | MtrunA17_Chr1g0209451 | 27.885 | 208 | 114 | 6 | 209 | 400 | 128 | 315 | 1.05e-12 | 69.3 |
Msa0520850 | MtrunA17_Chr4g0004971 | 24.460 | 278 | 162 | 10 | 83 | 340 | 54 | 303 | 1.06e-12 | 68.9 |
Msa0520850 | MtrunA17_Chr1g0192421 | 32.653 | 147 | 73 | 4 | 212 | 340 | 172 | 310 | 1.32e-12 | 68.6 |
Msa0520850 | MtrunA17_Chr1g0153671 | 29.327 | 208 | 109 | 7 | 206 | 395 | 120 | 307 | 2.43e-12 | 68.2 |
Msa0520850 | MtrunA17_Chr8g0371321 | 24.911 | 281 | 145 | 9 | 86 | 340 | 60 | 300 | 2.93e-12 | 67.8 |
Msa0520850 | MtrunA17_Chr3g0133801 | 31.944 | 144 | 71 | 5 | 211 | 338 | 128 | 260 | 4.91e-12 | 67.4 |
Msa0520850 | MtrunA17_Chr8g0342431 | 24.590 | 305 | 159 | 11 | 79 | 340 | 58 | 334 | 6.70e-12 | 66.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0520850 | AT4G31860.1 | 79.155 | 355 | 72 | 1 | 54 | 408 | 1 | 353 | 0.0 | 609 |
Msa0520850 | AT2G25070.1 | 76.540 | 341 | 80 | 0 | 54 | 394 | 1 | 341 | 0.0 | 580 |
Msa0520850 | AT2G25070.2 | 76.540 | 341 | 80 | 0 | 54 | 394 | 1 | 341 | 0.0 | 580 |
Msa0520850 | AT4G31860.3 | 82.935 | 293 | 50 | 0 | 54 | 346 | 1 | 293 | 0.0 | 533 |
Msa0520850 | AT4G31860.2 | 84.000 | 275 | 44 | 0 | 54 | 328 | 1 | 275 | 0.0 | 506 |
Msa0520850 | AT2G25620.1 | 30.909 | 330 | 163 | 7 | 76 | 391 | 89 | 367 | 1.05e-37 | 141 |
Msa0520850 | AT2G25620.2 | 30.909 | 330 | 163 | 7 | 76 | 391 | 89 | 367 | 1.05e-37 | 141 |
Msa0520850 | AT5G10740.1 | 31.045 | 335 | 157 | 10 | 57 | 382 | 10 | 279 | 1.23e-37 | 140 |
Msa0520850 | AT5G10740.2 | 31.045 | 335 | 157 | 10 | 57 | 382 | 10 | 279 | 1.23e-37 | 140 |
Msa0520850 | AT3G51470.2 | 28.213 | 319 | 164 | 7 | 75 | 386 | 27 | 287 | 2.44e-36 | 135 |
Msa0520850 | AT3G51470.1 | 28.213 | 319 | 164 | 7 | 75 | 386 | 71 | 331 | 3.67e-36 | 136 |
Msa0520850 | AT5G24940.1 | 31.132 | 318 | 147 | 11 | 71 | 382 | 28 | 279 | 4.46e-36 | 137 |
Msa0520850 | AT2G33700.1 | 29.022 | 317 | 159 | 6 | 76 | 382 | 84 | 344 | 8.01e-36 | 135 |
Msa0520850 | AT1G43900.1 | 30.723 | 332 | 150 | 12 | 57 | 383 | 113 | 369 | 2.83e-34 | 131 |
Msa0520850 | AT4G31750.1 | 28.729 | 362 | 177 | 11 | 60 | 408 | 9 | 302 | 4.61e-34 | 129 |
Msa0520850 | AT4G31750.3 | 28.729 | 362 | 177 | 11 | 60 | 408 | 9 | 302 | 4.61e-34 | 129 |
Msa0520850 | AT4G31750.2 | 29.167 | 336 | 160 | 10 | 60 | 382 | 9 | 279 | 8.38e-34 | 128 |
Msa0520850 | AT2G29380.1 | 33.333 | 306 | 146 | 12 | 44 | 334 | 42 | 304 | 1.52e-33 | 129 |
Msa0520850 | AT1G07430.1 | 33.803 | 284 | 132 | 10 | 74 | 344 | 118 | 358 | 5.05e-33 | 129 |
Msa0520850 | AT1G48040.1 | 31.034 | 319 | 165 | 10 | 86 | 395 | 88 | 360 | 4.32e-32 | 125 |
Msa0520850 | AT5G53140.1 | 30.636 | 346 | 163 | 13 | 67 | 407 | 95 | 368 | 4.43e-32 | 126 |
Msa0520850 | AT5G53140.2 | 30.636 | 346 | 163 | 13 | 67 | 407 | 95 | 368 | 4.43e-32 | 126 |
Msa0520850 | AT4G27800.1 | 28.818 | 347 | 180 | 9 | 75 | 396 | 58 | 362 | 6.23e-31 | 122 |
Msa0520850 | AT1G67820.2 | 33.212 | 274 | 120 | 8 | 77 | 344 | 85 | 301 | 1.46e-30 | 122 |
Msa0520850 | AT1G67820.1 | 33.212 | 274 | 120 | 8 | 77 | 344 | 121 | 337 | 2.33e-30 | 122 |
Msa0520850 | AT3G62260.1 | 29.483 | 329 | 155 | 9 | 75 | 382 | 76 | 348 | 2.43e-30 | 120 |
Msa0520850 | AT3G62260.2 | 29.483 | 329 | 155 | 9 | 75 | 382 | 77 | 349 | 2.44e-30 | 120 |
Msa0520850 | AT3G62260.3 | 29.321 | 324 | 152 | 9 | 89 | 391 | 1 | 268 | 6.01e-30 | 117 |
Msa0520850 | AT1G07160.1 | 27.729 | 339 | 159 | 11 | 60 | 382 | 108 | 376 | 1.02e-29 | 119 |
Msa0520850 | AT5G59220.1 | 32.143 | 280 | 135 | 9 | 76 | 344 | 111 | 346 | 8.74e-29 | 117 |
Msa0520850 | AT4G26080.1 | 29.720 | 286 | 135 | 6 | 77 | 344 | 129 | 366 | 9.70e-29 | 117 |
Msa0520850 | AT3G11410.1 | 32.472 | 271 | 141 | 9 | 72 | 334 | 100 | 336 | 9.84e-29 | 116 |
Msa0520850 | AT4G27800.2 | 30.065 | 306 | 152 | 8 | 75 | 355 | 58 | 326 | 1.70e-28 | 114 |
Msa0520850 | AT5G51760.2 | 30.847 | 295 | 138 | 9 | 77 | 348 | 79 | 330 | 3.02e-28 | 115 |
Msa0520850 | AT5G57050.2 | 28.743 | 334 | 154 | 11 | 77 | 382 | 73 | 350 | 3.46e-28 | 114 |
Msa0520850 | AT1G17550.1 | 31.469 | 286 | 145 | 9 | 77 | 339 | 189 | 446 | 3.53e-28 | 116 |
Msa0520850 | AT1G17550.2 | 31.469 | 286 | 145 | 9 | 77 | 339 | 189 | 446 | 3.53e-28 | 116 |
Msa0520850 | AT5G51760.1 | 30.847 | 295 | 138 | 9 | 77 | 348 | 109 | 360 | 4.88e-28 | 115 |
Msa0520850 | AT2G30020.1 | 28.981 | 314 | 157 | 10 | 77 | 382 | 140 | 395 | 5.05e-28 | 114 |
Msa0520850 | AT5G57050.1 | 28.743 | 334 | 154 | 11 | 77 | 382 | 113 | 390 | 5.06e-28 | 115 |
Msa0520850 | AT4G27800.3 | 29.836 | 305 | 152 | 8 | 75 | 354 | 58 | 325 | 5.28e-28 | 113 |
Msa0520850 | AT1G72770.4 | 32.168 | 286 | 142 | 9 | 77 | 339 | 190 | 446 | 2.00e-27 | 114 |
Msa0520850 | AT1G72770.1 | 32.168 | 286 | 142 | 9 | 77 | 339 | 190 | 446 | 2.00e-27 | 114 |
Msa0520850 | AT1G72770.3 | 32.168 | 286 | 142 | 9 | 77 | 339 | 190 | 446 | 2.00e-27 | 114 |
Msa0520850 | AT3G17250.1 | 27.217 | 327 | 170 | 9 | 85 | 395 | 127 | 401 | 2.08e-27 | 113 |
Msa0520850 | AT1G18030.1 | 29.938 | 324 | 151 | 12 | 83 | 384 | 81 | 350 | 2.80e-27 | 111 |
Msa0520850 | AT1G78200.1 | 28.286 | 350 | 172 | 15 | 43 | 383 | 4 | 283 | 1.71e-26 | 108 |
Msa0520850 | AT1G78200.3 | 28.286 | 350 | 172 | 15 | 43 | 383 | 4 | 283 | 1.71e-26 | 108 |
Msa0520850 | AT1G78200.2 | 28.286 | 350 | 172 | 15 | 43 | 383 | 4 | 283 | 1.71e-26 | 108 |
Msa0520850 | AT2G40180.1 | 30.576 | 278 | 121 | 10 | 77 | 341 | 129 | 347 | 1.74e-25 | 107 |
Msa0520850 | AT2G40860.4 | 28.435 | 313 | 159 | 14 | 84 | 389 | 302 | 556 | 2.24e-25 | 108 |
Msa0520850 | AT2G40860.1 | 28.435 | 313 | 159 | 14 | 84 | 389 | 400 | 654 | 2.31e-25 | 108 |
Msa0520850 | AT1G78200.5 | 28.383 | 303 | 144 | 12 | 89 | 383 | 1 | 238 | 2.92e-24 | 100 |
Msa0520850 | AT1G78200.4 | 28.383 | 303 | 144 | 12 | 89 | 383 | 1 | 238 | 2.92e-24 | 100 |
Msa0520850 | AT2G40860.2 | 29.181 | 281 | 137 | 12 | 84 | 352 | 400 | 630 | 4.05e-23 | 102 |
Msa0520850 | AT1G18030.2 | 30.741 | 270 | 115 | 11 | 83 | 330 | 81 | 300 | 9.27e-22 | 95.5 |
Msa0520850 | AT3G15260.2 | 35.955 | 178 | 86 | 7 | 213 | 383 | 133 | 289 | 1.37e-21 | 94.7 |
Msa0520850 | AT3G15260.1 | 35.955 | 178 | 86 | 7 | 213 | 383 | 133 | 289 | 1.37e-21 | 94.7 |
Msa0520850 | AT4G28400.3 | 34.091 | 176 | 90 | 5 | 213 | 382 | 105 | 260 | 5.14e-21 | 92.4 |
Msa0520850 | AT4G28400.1 | 34.091 | 176 | 90 | 5 | 213 | 382 | 127 | 282 | 8.71e-21 | 92.0 |
Msa0520850 | AT1G34750.2 | 27.551 | 294 | 142 | 12 | 59 | 343 | 20 | 251 | 9.44e-21 | 92.0 |
Msa0520850 | AT1G34750.1 | 27.551 | 294 | 142 | 12 | 59 | 343 | 20 | 251 | 9.44e-21 | 92.0 |
Msa0520850 | AT1G34750.3 | 27.551 | 294 | 142 | 12 | 59 | 343 | 20 | 251 | 9.44e-21 | 92.0 |
Msa0520850 | AT5G59220.2 | 33.184 | 223 | 103 | 7 | 76 | 287 | 111 | 298 | 1.70e-20 | 91.7 |
Msa0520850 | AT2G20630.1 | 25.614 | 285 | 138 | 8 | 105 | 383 | 63 | 279 | 4.84e-20 | 90.1 |
Msa0520850 | AT1G72770.2 | 33.051 | 236 | 115 | 7 | 77 | 289 | 190 | 405 | 3.34e-19 | 89.4 |
Msa0520850 | AT1G72770.5 | 33.051 | 236 | 115 | 7 | 77 | 289 | 190 | 405 | 3.34e-19 | 89.4 |
Msa0520850 | AT2G20630.2 | 26.007 | 273 | 130 | 8 | 105 | 364 | 63 | 276 | 7.01e-19 | 86.7 |
Msa0520850 | AT1G22280.1 | 24.528 | 318 | 163 | 12 | 75 | 383 | 32 | 281 | 1.40e-18 | 85.9 |
Msa0520850 | AT1G34750.4 | 28.315 | 279 | 129 | 12 | 59 | 328 | 20 | 236 | 6.04e-18 | 83.2 |
Msa0520850 | AT2G34740.1 | 29.348 | 184 | 103 | 7 | 206 | 382 | 171 | 334 | 1.23e-17 | 84.0 |
Msa0520850 | AT1G22280.3 | 24.149 | 323 | 164 | 12 | 75 | 383 | 32 | 287 | 1.96e-17 | 82.4 |
Msa0520850 | AT5G36250.1 | 28.866 | 291 | 162 | 9 | 79 | 340 | 70 | 344 | 2.62e-17 | 84.0 |
Msa0520850 | AT5G57050.3 | 30.380 | 237 | 96 | 8 | 77 | 286 | 113 | 307 | 4.50e-17 | 82.0 |
Msa0520850 | AT4G28400.2 | 39.394 | 132 | 62 | 5 | 213 | 337 | 127 | 247 | 6.72e-17 | 80.5 |
Msa0520850 | AT3G55050.1 | 25.000 | 268 | 127 | 7 | 104 | 341 | 83 | 306 | 5.34e-16 | 79.7 |
Msa0520850 | AT3G55050.2 | 25.000 | 268 | 127 | 7 | 104 | 341 | 83 | 306 | 5.34e-16 | 79.7 |
Msa0520850 | AT3G12620.2 | 24.679 | 312 | 152 | 9 | 66 | 340 | 39 | 304 | 5.62e-16 | 79.7 |
Msa0520850 | AT3G12620.1 | 24.679 | 312 | 152 | 9 | 66 | 340 | 39 | 304 | 5.62e-16 | 79.7 |
Msa0520850 | AT5G02760.1 | 33.121 | 157 | 73 | 6 | 213 | 341 | 140 | 292 | 5.88e-16 | 79.3 |
Msa0520850 | AT1G16220.1 | 27.113 | 284 | 171 | 8 | 79 | 340 | 67 | 336 | 6.85e-16 | 79.7 |
Msa0520850 | AT2G34740.2 | 33.333 | 141 | 71 | 6 | 195 | 328 | 179 | 303 | 2.42e-15 | 77.0 |
Msa0520850 | AT2G34740.3 | 33.333 | 141 | 71 | 6 | 195 | 328 | 161 | 285 | 2.48e-15 | 76.6 |
Msa0520850 | AT4G33920.1 | 25.926 | 297 | 140 | 11 | 77 | 340 | 36 | 285 | 3.42e-15 | 77.0 |
Msa0520850 | AT1G79630.1 | 26.923 | 312 | 156 | 12 | 79 | 340 | 70 | 359 | 3.82e-15 | 77.8 |
Msa0520850 | AT1G03590.1 | 28.772 | 285 | 151 | 11 | 81 | 340 | 65 | 322 | 3.94e-15 | 77.4 |
Msa0520850 | AT1G79630.8 | 26.923 | 312 | 156 | 12 | 79 | 340 | 66 | 355 | 4.61e-15 | 77.4 |
Msa0520850 | AT4G32950.1 | 36.054 | 147 | 68 | 5 | 212 | 340 | 138 | 276 | 5.01e-15 | 76.3 |
Msa0520850 | AT3G17090.2 | 25.843 | 267 | 126 | 9 | 104 | 341 | 83 | 306 | 5.53e-15 | 75.9 |
Msa0520850 | AT4G03415.1 | 28.114 | 281 | 161 | 9 | 81 | 340 | 72 | 332 | 7.54e-15 | 76.6 |
Msa0520850 | AT4G03415.3 | 28.114 | 281 | 161 | 9 | 81 | 340 | 72 | 332 | 7.54e-15 | 76.6 |
Msa0520850 | AT4G03415.2 | 28.114 | 281 | 161 | 9 | 81 | 340 | 72 | 332 | 7.54e-15 | 76.6 |
Msa0520850 | AT3G63340.8 | 27.660 | 235 | 113 | 6 | 212 | 396 | 232 | 459 | 7.73e-15 | 77.4 |
Msa0520850 | AT3G63340.7 | 27.542 | 236 | 114 | 6 | 211 | 396 | 231 | 459 | 7.74e-15 | 77.4 |
Msa0520850 | AT3G63340.6 | 27.542 | 236 | 114 | 6 | 211 | 396 | 231 | 459 | 7.91e-15 | 77.4 |
Msa0520850 | AT3G63340.3 | 27.542 | 236 | 114 | 6 | 211 | 396 | 231 | 459 | 7.91e-15 | 77.4 |
Msa0520850 | AT3G63340.10 | 27.542 | 236 | 114 | 6 | 211 | 396 | 231 | 459 | 7.91e-15 | 77.4 |
Msa0520850 | AT3G63340.4 | 27.542 | 236 | 114 | 6 | 211 | 396 | 231 | 459 | 7.91e-15 | 77.4 |
Msa0520850 | AT3G17090.1 | 25.843 | 267 | 126 | 9 | 104 | 341 | 83 | 306 | 7.99e-15 | 75.9 |
Msa0520850 | AT3G63340.5 | 27.542 | 236 | 114 | 6 | 211 | 396 | 231 | 459 | 8.09e-15 | 77.4 |
Msa0520850 | AT3G63340.1 | 27.542 | 236 | 114 | 6 | 211 | 396 | 231 | 459 | 8.09e-15 | 77.4 |
Msa0520850 | AT1G79630.6 | 34.694 | 147 | 70 | 4 | 212 | 340 | 111 | 249 | 8.60e-15 | 75.9 |
Msa0520850 | AT1G79630.3 | 34.694 | 147 | 70 | 4 | 212 | 340 | 111 | 249 | 8.60e-15 | 75.9 |
Msa0520850 | AT1G79630.4 | 34.694 | 147 | 70 | 4 | 212 | 340 | 111 | 249 | 8.60e-15 | 75.9 |
Msa0520850 | AT1G79630.5 | 34.694 | 147 | 70 | 4 | 212 | 340 | 111 | 249 | 8.60e-15 | 75.9 |
Msa0520850 | AT3G16800.4 | 34.228 | 149 | 71 | 5 | 212 | 341 | 74 | 214 | 8.88e-15 | 74.3 |
Msa0520850 | AT3G16800.6 | 34.228 | 149 | 71 | 5 | 212 | 341 | 74 | 214 | 8.88e-15 | 74.3 |
Msa0520850 | AT1G79630.2 | 34.694 | 147 | 70 | 4 | 212 | 340 | 151 | 289 | 1.14e-14 | 75.9 |
Msa0520850 | AT1G79630.7 | 34.694 | 147 | 70 | 4 | 212 | 340 | 151 | 289 | 1.14e-14 | 75.9 |
Msa0520850 | AT3G63340.11 | 27.966 | 236 | 113 | 7 | 211 | 396 | 231 | 459 | 1.17e-14 | 76.6 |
Msa0520850 | AT3G63340.12 | 27.660 | 235 | 113 | 6 | 212 | 396 | 232 | 459 | 1.27e-14 | 76.3 |
Msa0520850 | AT5G26010.1 | 27.090 | 299 | 151 | 12 | 64 | 340 | 30 | 283 | 1.29e-14 | 75.1 |
Msa0520850 | AT4G38520.2 | 26.136 | 264 | 127 | 7 | 104 | 340 | 80 | 302 | 1.85e-14 | 75.1 |
Msa0520850 | AT4G38520.1 | 26.136 | 264 | 127 | 7 | 104 | 340 | 80 | 302 | 1.85e-14 | 75.1 |
Msa0520850 | AT3G16800.2 | 34.228 | 149 | 71 | 5 | 212 | 341 | 169 | 309 | 2.12e-14 | 74.3 |
Msa0520850 | AT3G16800.1 | 34.228 | 149 | 71 | 5 | 212 | 341 | 169 | 309 | 2.12e-14 | 74.3 |
Msa0520850 | AT3G16800.3 | 34.228 | 149 | 71 | 5 | 212 | 341 | 169 | 309 | 2.12e-14 | 74.3 |
Msa0520850 | AT5G36250.2 | 27.541 | 305 | 162 | 10 | 79 | 340 | 70 | 358 | 4.25e-14 | 74.3 |
Msa0520850 | AT3G02750.2 | 34.694 | 147 | 70 | 3 | 212 | 340 | 215 | 353 | 5.74e-14 | 73.9 |
Msa0520850 | AT3G02750.1 | 34.694 | 147 | 70 | 3 | 212 | 340 | 215 | 353 | 5.74e-14 | 73.9 |
Msa0520850 | AT5G27930.1 | 28.125 | 256 | 131 | 9 | 105 | 340 | 92 | 314 | 7.15e-14 | 73.2 |
Msa0520850 | AT5G27930.2 | 28.125 | 256 | 131 | 9 | 105 | 340 | 92 | 314 | 7.15e-14 | 73.2 |
Msa0520850 | AT5G66080.1 | 23.596 | 267 | 130 | 9 | 104 | 340 | 81 | 303 | 1.67e-13 | 72.0 |
Msa0520850 | AT3G51370.1 | 23.596 | 267 | 130 | 8 | 104 | 340 | 78 | 300 | 2.24e-13 | 71.6 |
Msa0520850 | AT3G51370.3 | 23.596 | 267 | 130 | 8 | 104 | 340 | 78 | 300 | 2.24e-13 | 71.6 |
Msa0520850 | AT3G63340.2 | 31.875 | 160 | 95 | 4 | 244 | 396 | 340 | 492 | 2.65e-13 | 72.4 |
Msa0520850 | AT5G06750.3 | 23.985 | 271 | 129 | 9 | 105 | 342 | 82 | 308 | 1.32e-12 | 69.3 |
Msa0520850 | AT5G06750.1 | 23.985 | 271 | 129 | 9 | 105 | 342 | 82 | 308 | 1.32e-12 | 69.3 |
Msa0520850 | AT5G01700.1 | 25.436 | 287 | 150 | 11 | 79 | 340 | 1 | 248 | 1.22e-11 | 65.9 |
Msa0520850 | AT3G05640.2 | 30.323 | 155 | 82 | 5 | 204 | 340 | 163 | 309 | 1.25e-11 | 66.2 |
Msa0520850 | AT3G05640.1 | 30.323 | 155 | 82 | 5 | 204 | 340 | 163 | 309 | 1.25e-11 | 66.2 |
Msa0520850 | AT3G05640.3 | 30.323 | 155 | 82 | 5 | 204 | 340 | 163 | 309 | 1.25e-11 | 66.2 |
Msa0520850 | AT3G51370.2 | 27.673 | 159 | 81 | 4 | 213 | 341 | 62 | 216 | 1.55e-11 | 65.1 |
Msa0520850 | AT5G01700.2 | 25.436 | 287 | 150 | 11 | 79 | 340 | 50 | 297 | 3.08e-11 | 65.1 |
Msa0520850 | AT4G33920.3 | 30.864 | 162 | 77 | 6 | 211 | 340 | 14 | 172 | 4.03e-11 | 63.5 |
Msa0520850 | AT5G66080.2 | 26.582 | 158 | 82 | 4 | 213 | 340 | 46 | 199 | 4.06e-11 | 63.9 |
Msa0520850 | AT4G33920.2 | 30.864 | 162 | 77 | 6 | 211 | 340 | 44 | 202 | 5.88e-11 | 63.5 |
Msa0520850 | AT5G06750.2 | 28.834 | 163 | 79 | 5 | 213 | 342 | 68 | 226 | 9.09e-11 | 63.2 |
Find 86 sgRNAs with CRISPR-Local
Find 293 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTGTGATGAAGATGAGTTTA+TGG | 0.265435 | 3_4:+73374300 | Msa0520850:CDS |
AAACTTACAGTGTTTATATC+TGG | 0.272615 | 3_4:-73374105 | None:intergenic |
ACTTCGCTTCTTTCCACTTT+CGG | 0.325357 | 3_4:-73375377 | None:intergenic |
TTAAACCTTGCAAGAGCTAT+TGG | 0.340623 | 3_4:+73373646 | Msa0520850:CDS |
GCATACTTAGCTGGAGATAT+AGG | 0.353334 | 3_4:+73372296 | Msa0520850:CDS |
GAAAATGACCGTCTTAGATA+TGG | 0.379194 | 3_4:+73371231 | Msa0520850:CDS |
AAGTTCAGTGGGATGATAGA+AGG | 0.381756 | 3_4:+73372871 | Msa0520850:CDS |
TCCTTCTCAATCTCAAGATC+AGG | 0.384503 | 3_4:-73373571 | None:intergenic |
CCTTCGCCACCAGCAGTTGA+TGG | 0.406279 | 3_4:-73375245 | None:intergenic |
GGATGATAGAAGGGTTGATT+TGG | 0.408042 | 3_4:+73372881 | Msa0520850:CDS |
GTATTAACCGAGTTGATGAT+TGG | 0.410347 | 3_4:+73372923 | Msa0520850:CDS |
ATGGAGGGAGCTATCAATCT+TGG | 0.415716 | 3_4:+73372834 | Msa0520850:CDS |
GATGATGATTGCTCTTCTGC+AGG | 0.424321 | 3_4:-73375326 | None:intergenic |
GCAAGGCTGGCGTGCATCAA+TGG | 0.439275 | 3_4:+73371266 | Msa0520850:CDS |
TTGCTCTTCTGCAGGTGCAC+TGG | 0.443233 | 3_4:-73375318 | None:intergenic |
CAATCTCAAGATCAGGTTTG+TGG | 0.448649 | 3_4:-73373564 | None:intergenic |
GTAACTCAGGCAGAAGTAGA+AGG | 0.449616 | 3_4:-73370783 | None:intergenic |
AGTGTTAAATGAAAGGAGAA+TGG | 0.450263 | 3_4:-73375560 | None:intergenic |
AGTTCATGAACTACTGTGTT+CGG | 0.451450 | 3_4:+73374802 | Msa0520850:CDS |
ATACATTATATATATAGAAA+GGG | 0.452074 | 3_4:-73375471 | None:intergenic |
TATACATTATATATATAGAA+AGG | 0.454883 | 3_4:-73375472 | None:intergenic |
AAGAGTACTTGACCGGTGTT+TGG | 0.457534 | 3_4:+73375220 | Msa0520850:CDS |
TTTGAACTGCACCAAGATCA+TGG | 0.459378 | 3_4:-73375282 | None:intergenic |
CAGCATTTGCAACAACAACT+TGG | 0.462852 | 3_4:-73373229 | None:intergenic |
AGTTGATGATTGGGCCTTTG+AGG | 0.465711 | 3_4:+73372933 | Msa0520850:CDS |
GCAGGTGCACTGGACTGAGC+AGG | 0.465899 | 3_4:-73375308 | None:intergenic |
GCATGCTGCATATACTGATC+TGG | 0.467368 | 3_4:+73371809 | Msa0520850:intron |
TTAATACCATTGCTGCTTCG+TGG | 0.468931 | 3_4:-73372907 | None:intergenic |
GATAAGATAAACAAGTTCAG+TGG | 0.469232 | 3_4:+73372859 | Msa0520850:CDS |
TACAGTGTTTATATCTGGAT+TGG | 0.469339 | 3_4:-73374100 | None:intergenic |
CTGCTTGTCAAGTCAACAAT+TGG | 0.471070 | 3_4:+73374772 | Msa0520850:CDS |
ATCACATGTTGAACCGAAAG+TGG | 0.477597 | 3_4:+73375364 | Msa0520850:CDS |
TAGACATGAGAACCAAGTAC+TGG | 0.480598 | 3_4:-73375592 | None:intergenic |
CAATTGCTCTTCCTCTGCTC+AGG | 0.484154 | 3_4:+73370882 | Msa0520850:CDS |
CAAGTTGTTGTTGCAAATGC+TGG | 0.490892 | 3_4:+73373230 | Msa0520850:CDS |
TGCTAGCTTGTGATGGCATA+TGG | 0.491268 | 3_4:+73374323 | Msa0520850:CDS |
GTGTTAAATGAAAGGAGAAT+GGG | 0.494985 | 3_4:-73375559 | None:intergenic |
TGTAATATCTCGGAAGGGCC+AGG | 0.495009 | 3_4:+73373265 | Msa0520850:CDS |
CCATCAACTGCTGGTGGCGA+AGG | 0.496781 | 3_4:+73375245 | Msa0520850:CDS |
ACTATGAAGTGCCCAGTACT+TGG | 0.498096 | 3_4:+73375580 | Msa0520850:three_prime_UTR |
TTAATACAGAAGATAGCAAT+GGG | 0.501982 | 3_4:+73371162 | Msa0520850:intron |
TGGAGGGAGCTATCAATCTT+GGG | 0.503649 | 3_4:+73372835 | Msa0520850:CDS |
GGTTCAACATGTGATTCAGC+TGG | 0.506557 | 3_4:-73375356 | None:intergenic |
TGATAACATGACCATGATCT+TGG | 0.508668 | 3_4:+73375271 | Msa0520850:CDS |
TCAGAAGAAGAAGATTGATA+AGG | 0.513547 | 3_4:-73370822 | None:intergenic |
AAGGAAAGAATCTTAAAAGC+TGG | 0.515169 | 3_4:+73373589 | Msa0520850:CDS |
CAGGCTGTGCTTCCTGAAGT+TGG | 0.537802 | 3_4:-73373185 | None:intergenic |
TTTGGCGTTTATGATGGTCA+TGG | 0.539479 | 3_4:+73371849 | Msa0520850:CDS |
TATTAACCGAGTTGATGATT+GGG | 0.540196 | 3_4:+73372924 | Msa0520850:CDS |
GAAATTGAATGAAGTAACTC+AGG | 0.547194 | 3_4:-73370796 | None:intergenic |
GTTTCTAATAACTGCAACAC+AGG | 0.558516 | 3_4:-73373204 | None:intergenic |
TTTAATACAGAAGATAGCAA+TGG | 0.559141 | 3_4:+73371161 | Msa0520850:intron |
ATAAGATAAACAAGTTCAGT+GGG | 0.564058 | 3_4:+73372860 | Msa0520850:CDS |
AGTTACCAATAGCTCTTGCA+AGG | 0.565687 | 3_4:-73373651 | None:intergenic |
TGATGCGTGGTCAAAGAGGA+TGG | 0.567410 | 3_4:+73372815 | Msa0520850:CDS |
ACTTCATAGTGTTAAATGAA+AGG | 0.577398 | 3_4:-73375567 | None:intergenic |
ATTCAGATGCAATATATCAC+AGG | 0.577550 | 3_4:-73375535 | None:intergenic |
TTTATGGTGCTAGCTTGTGA+TGG | 0.580225 | 3_4:+73374316 | Msa0520850:CDS |
ATTCGCGTTGTGTAATATCT+CGG | 0.580696 | 3_4:+73373255 | Msa0520850:CDS |
TCAATTCATTGTAGGTGACA+TGG | 0.582161 | 3_4:+73374029 | Msa0520850:intron |
GAAAGAATCTTAAAAGCTGG+TGG | 0.582557 | 3_4:+73373592 | Msa0520850:CDS |
GCGTTGTGTAATATCTCGGA+AGG | 0.584039 | 3_4:+73373259 | Msa0520850:CDS |
TACATTATATATATAGAAAG+GGG | 0.584054 | 3_4:-73375470 | None:intergenic |
GTTTATCATCAATGCAAGGC+TGG | 0.589422 | 3_4:+73371253 | Msa0520850:CDS |
CAGTTGATGGTGCCAAACAC+CGG | 0.590786 | 3_4:-73375232 | None:intergenic |
TGGTCTCCACGAAGCAGCAA+TGG | 0.594647 | 3_4:+73372901 | Msa0520850:CDS |
AGTTCAGTGGGATGATAGAA+GGG | 0.599134 | 3_4:+73372872 | Msa0520850:CDS |
GCGTGGTCAAAGAGGATGGA+GGG | 0.599400 | 3_4:+73372819 | Msa0520850:CDS |
CAAAGGCCCAATCATCAACT+CGG | 0.600050 | 3_4:-73372930 | None:intergenic |
ATGATAAACCATATCTAAGA+CGG | 0.602011 | 3_4:-73371239 | None:intergenic |
ACCTGATCTTGAGATTGAGA+AGG | 0.604677 | 3_4:+73373570 | Msa0520850:CDS |
TGTTTGGCACCATCAACTGC+TGG | 0.605486 | 3_4:+73375236 | Msa0520850:CDS |
ATTCATGCAGGACGAGTGAA+CGG | 0.606384 | 3_4:+73373619 | Msa0520850:CDS |
TGATGATTGGGCCTTTGAGG+AGG | 0.617991 | 3_4:+73372936 | Msa0520850:CDS |
AGACATGAGAACCAAGTACT+GGG | 0.626098 | 3_4:-73375591 | None:intergenic |
TGTCAGACCTACCTCCTCAA+AGG | 0.629378 | 3_4:-73372947 | None:intergenic |
GGTCCAGCAAAATCAGAATG+AGG | 0.630449 | 3_4:-73373164 | None:intergenic |
TATGGTTTATCATCAATGCA+AGG | 0.642455 | 3_4:+73371249 | Msa0520850:CDS |
GGCGTTTATGATGGTCATGG+AGG | 0.652696 | 3_4:+73371852 | Msa0520850:CDS |
AAGCATGCGTACCTGAGCAG+AGG | 0.662812 | 3_4:-73370893 | None:intergenic |
GAGATGATGCGTGGTCAAAG+AGG | 0.678107 | 3_4:+73372811 | Msa0520850:CDS |
TGTGTGAAAGAGTACTTGAC+CGG | 0.686232 | 3_4:+73375213 | Msa0520850:CDS |
CGTTGTGTAATATCTCGGAA+GGG | 0.694273 | 3_4:+73373260 | Msa0520850:CDS |
TTGGCACCATCAACTGCTGG+TGG | 0.700424 | 3_4:+73375239 | Msa0520850:CDS |
TGCGTGGTCAAAGAGGATGG+AGG | 0.715747 | 3_4:+73372818 | Msa0520850:CDS |
AGAATGGATGAGATGATGCG+TGG | 0.759110 | 3_4:+73372802 | Msa0520850:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TGTAATTTGAATTTATTTTT+TGG | + | chr3_4:73373132-73373151 | Msa0520850:intron | 10.0% |
!!! | ATCAATTATTATTTTAAGAA+AGG | - | chr3_4:73374731-73374750 | None:intergenic | 10.0% |
!! | ATACATTATATATATAGAAA+GGG | - | chr3_4:73375474-73375493 | None:intergenic | 10.0% |
!! | TATACATTATATATATAGAA+AGG | - | chr3_4:73375475-73375494 | None:intergenic | 10.0% |
!! | CTTTATATATTAAAGAGAAA+AGG | - | chr3_4:73372500-73372519 | None:intergenic | 15.0% |
!! | AAACATACTTAAGTAAATTT+CGG | - | chr3_4:73372544-73372563 | None:intergenic | 15.0% |
!! | AATATTATGTCTTTATTCTT+TGG | + | chr3_4:73374477-73374496 | Msa0520850:intron | 15.0% |
!!! | AAAATAATAATTGATTTCCT+TGG | + | chr3_4:73374736-73374755 | Msa0520850:intron | 15.0% |
!!! | AAATAATAATTGATTTCCTT+GGG | + | chr3_4:73374737-73374756 | Msa0520850:intron | 15.0% |
!! | TACATTATATATATAGAAAG+GGG | - | chr3_4:73375473-73375492 | None:intergenic | 15.0% |
!! | TAAAAATCAAGAAAATGAGA+GGG | - | chr3_4:73370972-73370991 | None:intergenic | 20.0% |
!! | TTAAAAATCAAGAAAATGAG+AGG | - | chr3_4:73370973-73370992 | None:intergenic | 20.0% |
!! | TTCTGTATTAAAACAAAACA+GGG | - | chr3_4:73371153-73371172 | None:intergenic | 20.0% |
!!! | AAACTTAAAAGCATAATTGA+TGG | - | chr3_4:73371576-73371595 | None:intergenic | 20.0% |
!! | GAATAAGATATACAAAACAA+AGG | - | chr3_4:73372472-73372491 | None:intergenic | 20.0% |
!!! | ATTTCAGATTTTAGTTTAGA+GGG | - | chr3_4:73372745-73372764 | None:intergenic | 20.0% |
!!! | TGAATTTATTTTTTGGAATC+AGG | + | chr3_4:73373139-73373158 | Msa0520850:intron | 20.0% |
!!! | GAATTTATTTTTTGGAATCA+GGG | + | chr3_4:73373140-73373159 | Msa0520850:intron | 20.0% |
!!! | AGATTTTTTATAGGATTTGA+GGG | + | chr3_4:73373963-73373982 | Msa0520850:intron | 20.0% |
!! | AATTGAGATATATCAAAGAT+AGG | - | chr3_4:73374015-73374034 | None:intergenic | 20.0% |
!! | TAGAAAAATAATTAAGCAGA+AGG | - | chr3_4:73374624-73374643 | None:intergenic | 20.0% |
!! | TAATACTTCATCTTCTTATT+AGG | - | chr3_4:73374853-73374872 | None:intergenic | 20.0% |
! | AAGGATTAGATAACAAAAAC+AGG | - | chr3_4:73370937-73370956 | None:intergenic | 25.0% |
! | TTTATACTATGAACAAATCG+AGG | - | chr3_4:73371047-73371066 | None:intergenic | 25.0% |
! | CTTCTGTATTAAAACAAAAC+AGG | - | chr3_4:73371154-73371173 | None:intergenic | 25.0% |
! | TTTAATACAGAAGATAGCAA+TGG | + | chr3_4:73371161-73371180 | Msa0520850:intron | 25.0% |
! | TTAATACAGAAGATAGCAAT+GGG | + | chr3_4:73371162-73371181 | Msa0520850:intron | 25.0% |
! | ATGATAAACCATATCTAAGA+CGG | - | chr3_4:73371242-73371261 | None:intergenic | 25.0% |
!!! | GTGGTATATTTGTTGATTTT+AGG | + | chr3_4:73371399-73371418 | Msa0520850:intron | 25.0% |
! | CATTGTTTGAAAAGATTCAA+AGG | + | chr3_4:73371510-73371529 | Msa0520850:intron | 25.0% |
!!! | GATAAGTCTACTTCATTTTT+TGG | + | chr3_4:73371831-73371850 | Msa0520850:CDS | 25.0% |
! | AGGTAAGATTTGAAAATGTT+TGG | + | chr3_4:73371872-73371891 | Msa0520850:intron | 25.0% |
! | GATTATTGAGATCTGTAAAT+TGG | - | chr3_4:73372151-73372170 | None:intergenic | 25.0% |
!! | TTACCTGAAAATTTTGGATT+CGG | - | chr3_4:73372221-73372240 | None:intergenic | 25.0% |
! | TTGTGTAAATAAGTGACAAT+TGG | + | chr3_4:73372379-73372398 | Msa0520850:intron | 25.0% |
!! | GTTTTTACTGATAATCCAAA+TGG | - | chr3_4:73372450-73372469 | None:intergenic | 25.0% |
! | CATGATCATAACTAACAAAT+AGG | - | chr3_4:73372632-73372651 | None:intergenic | 25.0% |
!! | CTATTTGTTAGTTATGATCA+TGG | + | chr3_4:73372630-73372649 | Msa0520850:intron | 25.0% |
!!! | TTTCAGATTTTAGTTTAGAG+GGG | - | chr3_4:73372744-73372763 | None:intergenic | 25.0% |
!!! | CATTTCAGATTTTAGTTTAG+AGG | - | chr3_4:73372746-73372765 | None:intergenic | 25.0% |
! | CTCTAAACTAAAATCTGAAA+TGG | + | chr3_4:73372744-73372763 | Msa0520850:intron | 25.0% |
!! | ATTTTCAATACTATGCAGAA+TGG | + | chr3_4:73372786-73372805 | Msa0520850:intron | 25.0% |
! | ATAAGATAAACAAGTTCAGT+GGG | + | chr3_4:73372860-73372879 | Msa0520850:CDS | 25.0% |
!! | GACAAATCATTTTCAAAAAG+AGG | - | chr3_4:73373431-73373450 | None:intergenic | 25.0% |
! | TTTCTAAGTTACAAATCTTG+CGG | + | chr3_4:73373481-73373500 | Msa0520850:intron | 25.0% |
! | GATTATAATTGGAAAAAGAG+GGG | - | chr3_4:73373731-73373750 | None:intergenic | 25.0% |
! | GGATTATAATTGGAAAAAGA+GGG | - | chr3_4:73373732-73373751 | None:intergenic | 25.0% |
!!! | TCTTCAGAGAGATTTTTTAT+AGG | + | chr3_4:73373954-73373973 | Msa0520850:intron | 25.0% |
!!! | GAGATTTTTTATAGGATTTG+AGG | + | chr3_4:73373962-73373981 | Msa0520850:intron | 25.0% |
!!! | GATTTTTTATAGGATTTGAG+GGG | + | chr3_4:73373964-73373983 | Msa0520850:intron | 25.0% |
! | GATATATCTCAATTCATTGT+AGG | + | chr3_4:73374021-73374040 | Msa0520850:intron | 25.0% |
! | AAACTTACAGTGTTTATATC+TGG | - | chr3_4:73374108-73374127 | None:intergenic | 25.0% |
!! | CACATTTTCCATTTTCTTTA+TGG | + | chr3_4:73374180-73374199 | Msa0520850:intron | 25.0% |
! | CCATGCATTATACTATTTAT+GGG | - | chr3_4:73374211-73374230 | None:intergenic | 25.0% |
! | ACCATGCATTATACTATTTA+TGG | - | chr3_4:73374212-73374231 | None:intergenic | 25.0% |
!!! | TTTGTTTTGACACTTGTTAT+AGG | + | chr3_4:73374270-73374289 | Msa0520850:intron | 25.0% |
! | ATTAATAGGATTTCCATTCT+AGG | + | chr3_4:73374437-73374456 | Msa0520850:intron | 25.0% |
! | AGTGTAATTTACTCATATAG+AGG | - | chr3_4:73374528-73374547 | None:intergenic | 25.0% |
!!! | TTTGATTCTGGAATTAGTTT+CGG | + | chr3_4:73374684-73374703 | Msa0520850:intron | 25.0% |
! | AAAAATAGCAGAATGCTTAT+CGG | - | chr3_4:73374955-73374974 | None:intergenic | 25.0% |
! | ACTTCATAGTGTTAAATGAA+AGG | - | chr3_4:73375570-73375589 | None:intergenic | 25.0% |
GAAATTGAATGAAGTAACTC+AGG | - | chr3_4:73370799-73370818 | None:intergenic | 30.0% | |
TCAGAAGAAGAAGATTGATA+AGG | - | chr3_4:73370825-73370844 | None:intergenic | 30.0% | |
! | TCAGAAAACTTTTCGGTTTT+GGG | - | chr3_4:73371204-73371223 | None:intergenic | 30.0% |
! | ATCAGAAAACTTTTCGGTTT+TGG | - | chr3_4:73371205-73371224 | None:intergenic | 30.0% |
TATGGTTTATCATCAATGCA+AGG | + | chr3_4:73371249-73371268 | Msa0520850:CDS | 30.0% | |
TGAGAGATATTGATGTTATC+AGG | + | chr3_4:73371455-73371474 | Msa0520850:intron | 30.0% | |
GAGAGATATTGATGTTATCA+GGG | + | chr3_4:73371456-73371475 | Msa0520850:intron | 30.0% | |
TATTGATGTTATCAGGGTAA+CGG | + | chr3_4:73371462-73371481 | Msa0520850:intron | 30.0% | |
TGCAATTTCAGGAATATATG+TGG | + | chr3_4:73371547-73371566 | Msa0520850:intron | 30.0% | |
!!! | TCATTTTTTGGCGTTTATGA+TGG | + | chr3_4:73371843-73371862 | Msa0520850:CDS | 30.0% |
! | TGAAAAGTGCATAAGCTTAA+GGG | + | chr3_4:73371965-73371984 | Msa0520850:intron | 30.0% |
!! | TTTGGATTGATGGTGTAAAA+TGG | + | chr3_4:73371992-73372011 | Msa0520850:intron | 30.0% |
!! | ATTGATGGTGTAAAATGGAA+TGG | + | chr3_4:73371997-73372016 | Msa0520850:intron | 30.0% |
! | TTACCGAATCCAAAATTTTC+AGG | + | chr3_4:73372215-73372234 | Msa0520850:intron | 30.0% |
!!! | GAATCCAAAATTTTCAGGTA+AGG | + | chr3_4:73372220-73372239 | Msa0520850:intron | 30.0% |
!!! | CTTCATTTTTTAGCATCTGT+TGG | - | chr3_4:73372277-73372296 | None:intergenic | 30.0% |
AAAAATGAAGCATACTTAGC+TGG | + | chr3_4:73372287-73372306 | Msa0520850:CDS | 30.0% | |
!! | TAAAAAAGCTTGTTGAAGAG+AGG | - | chr3_4:73372324-73372343 | None:intergenic | 30.0% |
!!! | CTCTTCAACAAGCTTTTTTA+AGG | + | chr3_4:73372324-73372343 | Msa0520850:CDS | 30.0% |
GTCACTTATTTACACAATAC+AGG | - | chr3_4:73372376-73372395 | None:intergenic | 30.0% | |
TTACTGATAATCCAAATGGA+AGG | - | chr3_4:73372446-73372465 | None:intergenic | 30.0% | |
TACTTAAGTATGTTTCATGC+TGG | + | chr3_4:73372549-73372568 | Msa0520850:intron | 30.0% | |
!!! | TTCAGATTTTAGTTTAGAGG+GGG | - | chr3_4:73372743-73372762 | None:intergenic | 30.0% |
AATGGAACTTAGTTATGAAC+TGG | + | chr3_4:73372762-73372781 | Msa0520850:intron | 30.0% | |
GATAAGATAAACAAGTTCAG+TGG | + | chr3_4:73372859-73372878 | Msa0520850:CDS | 30.0% | |
!! | TATTAACCGAGTTGATGATT+GGG | + | chr3_4:73372924-73372943 | Msa0520850:CDS | 30.0% |
ACAACTTAGTTGGATATACT+TGG | + | chr3_4:73373001-73373020 | Msa0520850:intron | 30.0% | |
! | GTTGGATATACTTGGTAATT+AGG | + | chr3_4:73373009-73373028 | Msa0520850:intron | 30.0% |
AAGGAAAGAATCTTAAAAGC+TGG | + | chr3_4:73373589-73373608 | Msa0520850:CDS | 30.0% | |
CGGATTATAATTGGAAAAAG+AGG | - | chr3_4:73373733-73373752 | None:intergenic | 30.0% | |
! | TTTCCTTGTATGCTGTATTT+TGG | + | chr3_4:73373848-73373867 | Msa0520850:intron | 30.0% |
TACAGTGTTTATATCTGGAT+TGG | - | chr3_4:73374103-73374122 | None:intergenic | 30.0% | |
AGTTTATGTGTATCACTTAG+TGG | - | chr3_4:73374148-73374167 | None:intergenic | 30.0% | |
CCCATAAATAGTATAATGCA+TGG | + | chr3_4:73374208-73374227 | Msa0520850:intron | 30.0% | |
TTGTGATGAAGATGAGTTTA+TGG | + | chr3_4:73374300-73374319 | Msa0520850:CDS | 30.0% | |
TCACAACATTCAGAATCATA+TGG | - | chr3_4:73374373-73374392 | None:intergenic | 30.0% | |
TGTCATAGTTATTCAGAGAT+TGG | + | chr3_4:73374886-73374905 | Msa0520850:intron | 30.0% | |
ATGATATTGAATGCAGTACT+TGG | + | chr3_4:73374921-73374940 | Msa0520850:intron | 30.0% | |
CTAGACGTTATAAAAGACAA+TGG | - | chr3_4:73375101-73375120 | None:intergenic | 30.0% | |
TTACAGATCAGCTGATTAAT+AGG | - | chr3_4:73375163-73375182 | None:intergenic | 30.0% | |
ATTCAGATGCAATATATCAC+AGG | - | chr3_4:73375538-73375557 | None:intergenic | 30.0% | |
GTGTTAAATGAAAGGAGAAT+GGG | - | chr3_4:73375562-73375581 | None:intergenic | 30.0% | |
AGTGTTAAATGAAAGGAGAA+TGG | - | chr3_4:73375563-73375582 | None:intergenic | 30.0% | |
ATGAACAAATCGAGGAGTTA+AGG | - | chr3_4:73371039-73371058 | None:intergenic | 35.0% | |
! | ACCGAAAAGTTTTCTGATGA+CGG | + | chr3_4:73371207-73371226 | Msa0520850:CDS | 35.0% |
GAAAATGACCGTCTTAGATA+TGG | + | chr3_4:73371231-73371250 | Msa0520850:CDS | 35.0% | |
AGCCTCATTCAACATTTCTA+CGG | + | chr3_4:73371352-73371371 | Msa0520850:intron | 35.0% | |
!!! | GGGTATTGTTTTAGTATGTG+AGG | + | chr3_4:73371373-73371392 | Msa0520850:intron | 35.0% |
!! | GTTTTAGTATGTGAGGATTG+TGG | + | chr3_4:73371380-73371399 | Msa0520850:intron | 35.0% |
ACATCAATATCTCTCAACCA+GGG | - | chr3_4:73371451-73371470 | None:intergenic | 35.0% | |
AACATCAATATCTCTCAACC+AGG | - | chr3_4:73371452-73371471 | None:intergenic | 35.0% | |
ATTGATGTTATCAGGGTAAC+GGG | + | chr3_4:73371463-73371482 | Msa0520850:intron | 35.0% | |
ATCCAGTCAATTGCAATTTC+AGG | + | chr3_4:73371536-73371555 | Msa0520850:intron | 35.0% | |
TTCCTGAAATTGCAATTGAC+TGG | - | chr3_4:73371541-73371560 | None:intergenic | 35.0% | |
AAACATCATCAGCACAACAA+TGG | - | chr3_4:73371658-73371677 | None:intergenic | 35.0% | |
GTATGCTGCATATACTAATC+TGG | + | chr3_4:73371699-73371718 | Msa0520850:intron | 35.0% | |
!!! | TCGTGTTTTGGTGTTTATGA+TGG | + | chr3_4:73371733-73371752 | Msa0520850:intron | 35.0% |
TCATCAGCATACTAATGAAG+TGG | - | chr3_4:73371764-73371783 | None:intergenic | 35.0% | |
TGTTTGGCTACTTGAATTGA+TGG | + | chr3_4:73371888-73371907 | Msa0520850:intron | 35.0% | |
CACAATGGAAAGTAGACATT+TGG | - | chr3_4:73371947-73371966 | None:intergenic | 35.0% | |
! | AGCTTATGCACTTTTCACAA+TGG | - | chr3_4:73371962-73371981 | None:intergenic | 35.0% |
! | GTGAAAAGTGCATAAGCTTA+AGG | + | chr3_4:73371964-73371983 | Msa0520850:intron | 35.0% |
GGTGTAAAATGGAATGGAAT+AGG | + | chr3_4:73372003-73372022 | Msa0520850:intron | 35.0% | |
!! | TATGTTTGGATTGGTGGTAT+AGG | - | chr3_4:73372078-73372097 | None:intergenic | 35.0% |
TTTGCAAAAGTTGCAAGTGT+GGG | - | chr3_4:73372102-73372121 | None:intergenic | 35.0% | |
ATTTGCAAAAGTTGCAAGTG+TGG | - | chr3_4:73372103-73372122 | None:intergenic | 35.0% | |
! | CACTTGCAACTTTTGCAAAT+AGG | + | chr3_4:73372103-73372122 | Msa0520850:intron | 35.0% |
!!! | TCCAAAATTTTCAGGTAAGG+TGG | + | chr3_4:73372223-73372242 | Msa0520850:intron | 35.0% |
! | ACCACCTTACCTGAAAATTT+TGG | - | chr3_4:73372227-73372246 | None:intergenic | 35.0% |
TATTTACACAATACAGGCAG+AGG | - | chr3_4:73372370-73372389 | None:intergenic | 35.0% | |
! | GTGACAATTGGTTTCATGTT+TGG | + | chr3_4:73372391-73372410 | Msa0520850:intron | 35.0% |
TGTTTCATGCTGGACTAATT+TGG | + | chr3_4:73372559-73372578 | Msa0520850:intron | 35.0% | |
GTTTCATGCTGGACTAATTT+GGG | + | chr3_4:73372560-73372579 | Msa0520850:intron | 35.0% | |
!! | GTATTAACCGAGTTGATGAT+TGG | + | chr3_4:73372923-73372942 | Msa0520850:CDS | 35.0% |
CAACAGTATCACAACTTAGT+TGG | + | chr3_4:73372991-73373010 | Msa0520850:intron | 35.0% | |
GCAATGAAATATCATGCTCT+TGG | + | chr3_4:73373038-73373057 | Msa0520850:intron | 35.0% | |
ACTCACATAAACAAGCATGT+CGG | - | chr3_4:73373084-73373103 | None:intergenic | 35.0% | |
GTTTCTAATAACTGCAACAC+AGG | - | chr3_4:73373207-73373226 | None:intergenic | 35.0% | |
ATTCGCGTTGTGTAATATCT+CGG | + | chr3_4:73373255-73373274 | Msa0520850:CDS | 35.0% | |
!! | ATTTCCATTCTAGAGTTACC+TGG | - | chr3_4:73373286-73373305 | None:intergenic | 35.0% |
! | GAAAATGATTTGTCTCTCTC+TGG | + | chr3_4:73373437-73373456 | Msa0520850:intron | 35.0% |
! | TAACTACAGCTCTTTTCTGT+AGG | + | chr3_4:73373522-73373541 | Msa0520850:intron | 35.0% |
GAAAGAATCTTAAAAGCTGG+TGG | + | chr3_4:73373592-73373611 | Msa0520850:CDS | 35.0% | |
TTAAACCTTGCAAGAGCTAT+TGG | + | chr3_4:73373646-73373665 | Msa0520850:CDS | 35.0% | |
AAAAAAGTTCACAATCCCAG+AGG | - | chr3_4:73373678-73373697 | None:intergenic | 35.0% | |
AAAAAGAGGGGCAACAAAAA+TGG | - | chr3_4:73373719-73373738 | None:intergenic | 35.0% | |
ATCCTGAGCTAAAGATACAA+AGG | - | chr3_4:73373783-73373802 | None:intergenic | 35.0% | |
GAACCAAAATACAGCATACA+AGG | - | chr3_4:73373854-73373873 | None:intergenic | 35.0% | |
!!! | CTGTATTTTGGTTCTTCACA+AGG | + | chr3_4:73373860-73373879 | Msa0520850:intron | 35.0% |
! | TCTCTGAAGAAATCAGTGTT+AGG | - | chr3_4:73373944-73373963 | None:intergenic | 35.0% |
TCAATTCATTGTAGGTGACA+TGG | + | chr3_4:73374029-73374048 | Msa0520850:intron | 35.0% | |
GGGATCTACCATAAAGAAAA+TGG | - | chr3_4:73374191-73374210 | None:intergenic | 35.0% | |
TATGTCTTTATTCTTTGGCG+TGG | + | chr3_4:73374482-73374501 | Msa0520850:intron | 35.0% | |
ATGTCTTTATTCTTTGGCGT+GGG | + | chr3_4:73374483-73374502 | Msa0520850:intron | 35.0% | |
GTCTTACTATTGTTGACACT+TGG | + | chr3_4:73374661-73374680 | Msa0520850:intron | 35.0% | |
! | TGATTTCCTTGGGTTATTTC+AGG | + | chr3_4:73374747-73374766 | Msa0520850:intron | 35.0% |
! | GATTTCCTTGGGTTATTTCA+GGG | + | chr3_4:73374748-73374767 | Msa0520850:intron | 35.0% |
AGTTCATGAACTACTGTGTT+CGG | + | chr3_4:73374802-73374821 | Msa0520850:CDS | 35.0% | |
CACATCACATTTCTTTACCA+TGG | + | chr3_4:73375027-73375046 | Msa0520850:intron | 35.0% | |
ATTAAAGCCTAGTGCATCAA+CGG | - | chr3_4:73375076-73375095 | None:intergenic | 35.0% | |
ATTTCACGTAATGCACTAGA+AGG | + | chr3_4:73375122-73375141 | Msa0520850:intron | 35.0% | |
TGATAACATGACCATGATCT+TGG | + | chr3_4:73375271-73375290 | Msa0520850:CDS | 35.0% | |
GAGGAGTTAAGGAATCAAGA+AGG | - | chr3_4:73371028-73371047 | None:intergenic | 40.0% | |
! | GCCGTCATCAGAAAACTTTT+CGG | - | chr3_4:73371211-73371230 | None:intergenic | 40.0% |
GTTTATCATCAATGCAAGGC+TGG | + | chr3_4:73371253-73371272 | Msa0520850:CDS | 40.0% | |
GCCTCATTCAACATTTCTAC+GGG | + | chr3_4:73371353-73371372 | Msa0520850:intron | 40.0% | |
ACCCGTAGAAATGTTGAATG+AGG | - | chr3_4:73371357-73371376 | None:intergenic | 40.0% | |
!! | TGATTTTAGGCACTGCGTAA+TGG | + | chr3_4:73371412-73371431 | Msa0520850:intron | 40.0% |
!! | GATTTTAGGCACTGCGTAAT+GGG | + | chr3_4:73371413-73371432 | Msa0520850:intron | 40.0% |
GCAGCATACTAACAAACGAA+AGG | - | chr3_4:73371688-73371707 | None:intergenic | 40.0% | |
GCTGCATATACTAATCTGGA+TGG | + | chr3_4:73371703-73371722 | Msa0520850:intron | 40.0% | |
TTTGGCGTTTATGATGGTCA+TGG | + | chr3_4:73371849-73371868 | Msa0520850:CDS | 40.0% | |
! | CATAAGCTTAAGGGTGTGTT+TGG | + | chr3_4:73371974-73371993 | Msa0520850:intron | 40.0% |
! | TAAGGGTGTGTTTGGATTGA+TGG | + | chr3_4:73371982-73372001 | Msa0520850:intron | 40.0% |
TGGTATAGGATGGAATGGTA+TGG | - | chr3_4:73372064-73372083 | None:intergenic | 40.0% | |
! | ATTGGTGGTATAGGATGGAA+TGG | - | chr3_4:73372069-73372088 | None:intergenic | 40.0% |
!! | TTTGGATTGGTGGTATAGGA+TGG | - | chr3_4:73372074-73372093 | None:intergenic | 40.0% |
TTGCAAAAGTTGCAAGTGTG+GGG | - | chr3_4:73372101-73372120 | None:intergenic | 40.0% | |
GCATACTTAGCTGGAGATAT+AGG | + | chr3_4:73372296-73372315 | Msa0520850:CDS | 40.0% | |
GCTGTTCAAAACCTTCCATT+TGG | + | chr3_4:73372432-73372451 | Msa0520850:intron | 40.0% | |
TCATGTCTACTCGGTAATGT+TGG | - | chr3_4:73372690-73372709 | None:intergenic | 40.0% | |
TGTCACACTTCATGTCTACT+CGG | - | chr3_4:73372699-73372718 | None:intergenic | 40.0% | |
AAGTTCAGTGGGATGATAGA+AGG | + | chr3_4:73372871-73372890 | Msa0520850:CDS | 40.0% | |
AGTTCAGTGGGATGATAGAA+GGG | + | chr3_4:73372872-73372891 | Msa0520850:CDS | 40.0% | |
! | GGATGATAGAAGGGTTGATT+TGG | + | chr3_4:73372881-73372900 | Msa0520850:CDS | 40.0% |
! | TTAATACCATTGCTGCTTCG+TGG | - | chr3_4:73372910-73372929 | None:intergenic | 40.0% |
! | ATACTTGGTAATTAGGTGCC+TGG | + | chr3_4:73373016-73373035 | Msa0520850:intron | 40.0% |
GAGCATGATATTTCATTGCC+AGG | - | chr3_4:73373037-73373056 | None:intergenic | 40.0% | |
CTCACATAAACAAGCATGTC+GGG | - | chr3_4:73373083-73373102 | None:intergenic | 40.0% | |
CAGCATTTGCAACAACAACT+TGG | - | chr3_4:73373232-73373251 | None:intergenic | 40.0% | |
! | CAAGTTGTTGTTGCAAATGC+TGG | + | chr3_4:73373230-73373249 | Msa0520850:CDS | 40.0% |
CGTTGTGTAATATCTCGGAA+GGG | + | chr3_4:73373260-73373279 | Msa0520850:CDS | 40.0% | |
GTTACTTGACTACTGCACAT+TGG | + | chr3_4:73373392-73373411 | Msa0520850:intron | 40.0% | |
CAATCTCAAGATCAGGTTTG+TGG | - | chr3_4:73373567-73373586 | None:intergenic | 40.0% | |
ACCTGATCTTGAGATTGAGA+AGG | + | chr3_4:73373570-73373589 | Msa0520850:CDS | 40.0% | |
TCCTTCTCAATCTCAAGATC+AGG | - | chr3_4:73373574-73373593 | None:intergenic | 40.0% | |
AGTTACCAATAGCTCTTGCA+AGG | - | chr3_4:73373654-73373673 | None:intergenic | 40.0% | |
! | AGCTATTGGTAACTTCCTCT+GGG | + | chr3_4:73373660-73373679 | Msa0520850:intron | 40.0% |
! | TTGGTTCTTCACAAGGCATT+AGG | + | chr3_4:73373867-73373886 | Msa0520850:intron | 40.0% |
! | TTCACAAGGCATTAGGAGTT+TGG | + | chr3_4:73373874-73373893 | Msa0520850:intron | 40.0% |
TAGGATTTGAGGGGTGAAAT+TGG | + | chr3_4:73373973-73373992 | Msa0520850:intron | 40.0% | |
AGGATTTGAGGGGTGAAATT+GGG | + | chr3_4:73373974-73373993 | Msa0520850:intron | 40.0% | |
!! | GTTACAACTTGCTTTTCAGC+AGG | - | chr3_4:73374078-73374097 | None:intergenic | 40.0% |
! | TTTATGGTGCTAGCTTGTGA+TGG | + | chr3_4:73374316-73374335 | Msa0520850:CDS | 40.0% |
TCCATTCTAGGCACACATAT+AGG | + | chr3_4:73374449-73374468 | Msa0520850:intron | 40.0% | |
TCCTCATGTATAGACACTGA+TGG | + | chr3_4:73374552-73374571 | Msa0520850:intron | 40.0% | |
TCCATCAGTGTCTATACATG+AGG | - | chr3_4:73374556-73374575 | None:intergenic | 40.0% | |
TTCTAGACACATGTGAGTTG+AGG | + | chr3_4:73374639-73374658 | Msa0520850:intron | 40.0% | |
! | GTTGACACTTGGTTTGATTC+TGG | + | chr3_4:73374672-73374691 | Msa0520850:intron | 40.0% |
TTTAAGAAAGGCAGTACGAG+AGG | - | chr3_4:73374719-73374738 | None:intergenic | 40.0% | |
CTGCTTGTCAAGTCAACAAT+TGG | + | chr3_4:73374772-73374791 | Msa0520850:CDS | 40.0% | |
AATAGCAGAATGCTTATCGG+TGG | - | chr3_4:73374952-73374971 | None:intergenic | 40.0% | |
TTGCTTGCAATTAGTGTGAG+AGG | + | chr3_4:73374973-73374992 | Msa0520850:intron | 40.0% | |
CACATTTCTTTACCATGGAC+AGG | + | chr3_4:73375032-73375051 | Msa0520850:intron | 40.0% | |
TCAACGGATGTAGAACATCA+TGG | - | chr3_4:73375060-73375079 | None:intergenic | 40.0% | |
CTGATCTGTAATTATGCTGC+AGG | + | chr3_4:73375172-73375191 | Msa0520850:intron | 40.0% | |
!! | TGTGTGAAAGAGTACTTGAC+CGG | + | chr3_4:73375213-73375232 | Msa0520850:CDS | 40.0% |
TTTGAACTGCACCAAGATCA+TGG | - | chr3_4:73375285-73375304 | None:intergenic | 40.0% | |
ATCACATGTTGAACCGAAAG+TGG | + | chr3_4:73375364-73375383 | Msa0520850:CDS | 40.0% | |
ACTTCGCTTCTTTCCACTTT+CGG | - | chr3_4:73375380-73375399 | None:intergenic | 40.0% | |
GTAACTCAGGCAGAAGTAGA+AGG | - | chr3_4:73370786-73370805 | None:intergenic | 45.0% | |
GAGAGGGACGATGATTGAAA+AGG | - | chr3_4:73370956-73370975 | None:intergenic | 45.0% | |
CTCAACCAGGGTGATAAGTT+AGG | - | chr3_4:73371439-73371458 | None:intergenic | 45.0% | |
!! | GATGGCTCTACTTCGTGTTT+TGG | + | chr3_4:73371721-73371740 | Msa0520850:intron | 45.0% |
GCATGCTGCATATACTGATC+TGG | + | chr3_4:73371809-73371828 | Msa0520850:intron | 45.0% | |
AGTGTGGGGTATGTTTGGAT+TGG | - | chr3_4:73372087-73372106 | None:intergenic | 45.0% | |
TTGCAAGTGTGGGGTATGTT+TGG | - | chr3_4:73372092-73372111 | None:intergenic | 45.0% | |
GCTGGACTAATTTGGGAGTA+TGG | + | chr3_4:73372567-73372586 | Msa0520850:intron | 45.0% | |
!! | CTACTCGGTAATGTTGGTTC+TGG | - | chr3_4:73372684-73372703 | None:intergenic | 45.0% |
AGAATGGATGAGATGATGCG+TGG | + | chr3_4:73372802-73372821 | Msa0520850:intron | 45.0% | |
ATGGAGGGAGCTATCAATCT+TGG | + | chr3_4:73372834-73372853 | Msa0520850:CDS | 45.0% | |
TGGAGGGAGCTATCAATCTT+GGG | + | chr3_4:73372835-73372854 | Msa0520850:CDS | 45.0% | |
CAAAGGCCCAATCATCAACT+CGG | - | chr3_4:73372933-73372952 | None:intergenic | 45.0% | |
!! | AGTTGATGATTGGGCCTTTG+AGG | + | chr3_4:73372933-73372952 | Msa0520850:CDS | 45.0% |
GAGGTAGGTCTGACATTTGA+AGG | + | chr3_4:73372955-73372974 | Msa0520850:intron | 45.0% | |
! | GGACCTCATTCTGATTTTGC+TGG | + | chr3_4:73373161-73373180 | Msa0520850:CDS | 45.0% |
GGTCCAGCAAAATCAGAATG+AGG | - | chr3_4:73373167-73373186 | None:intergenic | 45.0% | |
! | GATTTTGCTGGACCAACTTC+AGG | + | chr3_4:73373173-73373192 | Msa0520850:CDS | 45.0% |
GCGTTGTGTAATATCTCGGA+AGG | + | chr3_4:73373259-73373278 | Msa0520850:CDS | 45.0% | |
!!! | GCTGGTGGTTTTATTCATGC+AGG | + | chr3_4:73373607-73373626 | Msa0520850:CDS | 45.0% |
ATTCATGCAGGACGAGTGAA+CGG | + | chr3_4:73373619-73373638 | Msa0520850:CDS | 45.0% | |
! | GAGCTATTGGTAACTTCCTC+TGG | + | chr3_4:73373659-73373678 | Msa0520850:intron | 45.0% |
TTCCAATTATAATCCGCCCC+CGG | + | chr3_4:73373737-73373756 | Msa0520850:intron | 45.0% | |
! | GGCCTTTGTATCTTTAGCTC+AGG | + | chr3_4:73373778-73373797 | Msa0520850:intron | 45.0% |
! | TGCTAGCTTGTGATGGCATA+TGG | + | chr3_4:73374323-73374342 | Msa0520850:CDS | 45.0% |
GCCTATATGTGTGCCTAGAA+TGG | - | chr3_4:73374453-73374472 | None:intergenic | 45.0% | |
AACATCATGGATCCTGTCCA+TGG | - | chr3_4:73375047-73375066 | None:intergenic | 45.0% | |
TCTACATCCGTTGATGCACT+AGG | + | chr3_4:73375066-73375085 | Msa0520850:intron | 45.0% | |
ACGTAATGCACTAGAAGGTC+TGG | + | chr3_4:73375127-73375146 | Msa0520850:intron | 45.0% | |
!! | AAGAGTACTTGACCGGTGTT+TGG | + | chr3_4:73375220-73375239 | Msa0520850:CDS | 45.0% |
GATGATGATTGCTCTTCTGC+AGG | - | chr3_4:73375329-73375348 | None:intergenic | 45.0% | |
GGTTCAACATGTGATTCAGC+TGG | - | chr3_4:73375359-73375378 | None:intergenic | 45.0% | |
! | ACTATGAAGTGCCCAGTACT+TGG | + | chr3_4:73375580-73375599 | Msa0520850:three_prime_UTR | 45.0% |
!!! | AATTTTTTATAAATTGATTA+AGG | + | chr3_4:73371317-73371336 | Msa0520850:intron | 5.0% |
!! | ATTAAAATGTAATAATTAAT+AGG | + | chr3_4:73374423-73374442 | Msa0520850:intron | 5.0% |
CAATTGCTCTTCCTCTGCTC+AGG | + | chr3_4:73370882-73370901 | Msa0520850:CDS | 50.0% | |
ATGGGCCTAACTTATCACCC+TGG | + | chr3_4:73371431-73371450 | Msa0520850:intron | 50.0% | |
GGCGTTTATGATGGTCATGG+AGG | + | chr3_4:73371852-73371871 | Msa0520850:CDS | 50.0% | |
! | GTGGGGTATGTTTGGATTGG+TGG | - | chr3_4:73372084-73372103 | None:intergenic | 50.0% |
GAGATGATGCGTGGTCAAAG+AGG | + | chr3_4:73372811-73372830 | Msa0520850:CDS | 50.0% | |
TGATGCGTGGTCAAAGAGGA+TGG | + | chr3_4:73372815-73372834 | Msa0520850:CDS | 50.0% | |
! | TGATGATTGGGCCTTTGAGG+AGG | + | chr3_4:73372936-73372955 | Msa0520850:CDS | 50.0% |
TGTCAGACCTACCTCCTCAA+AGG | - | chr3_4:73372950-73372969 | None:intergenic | 50.0% | |
TGTAATATCTCGGAAGGGCC+AGG | + | chr3_4:73373265-73373284 | Msa0520850:CDS | 50.0% | |
! | AGGGCCAGGTAACTCTAGAA+TGG | + | chr3_4:73373279-73373298 | Msa0520850:intron | 50.0% |
TCCAATTATAATCCGCCCCC+GGG | + | chr3_4:73373738-73373757 | Msa0520850:intron | 50.0% | |
GCAGTCCCTGAAATAACCCA+AGG | - | chr3_4:73374756-73374775 | None:intergenic | 50.0% | |
!! | CAGTTGATGGTGCCAAACAC+CGG | - | chr3_4:73375235-73375254 | None:intergenic | 50.0% |
TGTTTGGCACCATCAACTGC+TGG | + | chr3_4:73375236-73375255 | Msa0520850:CDS | 50.0% | |
AAGCATGCGTACCTGAGCAG+AGG | - | chr3_4:73370896-73370915 | None:intergenic | 55.0% | |
TGCGTGGTCAAAGAGGATGG+AGG | + | chr3_4:73372818-73372837 | Msa0520850:CDS | 55.0% | |
GCGTGGTCAAAGAGGATGGA+GGG | + | chr3_4:73372819-73372838 | Msa0520850:CDS | 55.0% | |
TGGTCTCCACGAAGCAGCAA+TGG | + | chr3_4:73372901-73372920 | Msa0520850:CDS | 55.0% | |
! | GATTGGGCCTTTGAGGAGGT+AGG | + | chr3_4:73372940-73372959 | Msa0520850:intron | 55.0% |
CAGGCTGTGCTTCCTGAAGT+TGG | - | chr3_4:73373188-73373207 | None:intergenic | 55.0% | |
!! | ACCCGGGGGCGGATTATAAT+TGG | - | chr3_4:73373742-73373761 | None:intergenic | 55.0% |
AGATACAAAGGCCCTTGCCC+AGG | - | chr3_4:73373771-73373790 | None:intergenic | 55.0% | |
TTGGCACCATCAACTGCTGG+TGG | + | chr3_4:73375239-73375258 | Msa0520850:CDS | 55.0% | |
TTGCTCTTCTGCAGGTGCAC+TGG | - | chr3_4:73375321-73375340 | None:intergenic | 55.0% | |
GCAAGGCTGGCGTGCATCAA+TGG | + | chr3_4:73371266-73371285 | Msa0520850:CDS | 60.0% | |
CCTTCGCCACCAGCAGTTGA+TGG | - | chr3_4:73375248-73375267 | None:intergenic | 60.0% | |
! | CCATCAACTGCTGGTGGCGA+AGG | + | chr3_4:73375245-73375264 | Msa0520850:CDS | 60.0% |
TTGCCCAGGTTGCTCACCCG+GGG | - | chr3_4:73373757-73373776 | None:intergenic | 65.0% | |
CTTGCCCAGGTTGCTCACCC+GGG | - | chr3_4:73373758-73373777 | None:intergenic | 65.0% | |
CCTTGCCCAGGTTGCTCACC+CGG | - | chr3_4:73373759-73373778 | None:intergenic | 65.0% | |
CGGGTGAGCAACCTGGGCAA+GGG | + | chr3_4:73373757-73373776 | Msa0520850:intron | 65.0% | |
GCAGGTGCACTGGACTGAGC+AGG | - | chr3_4:73375311-73375330 | None:intergenic | 65.0% | |
TGCCCAGGTTGCTCACCCGG+GGG | - | chr3_4:73373756-73373775 | None:intergenic | 70.0% | |
CCGGGTGAGCAACCTGGGCA+AGG | + | chr3_4:73373756-73373775 | Msa0520850:intron | 70.0% | |
CCAGGTTGCTCACCCGGGGG+CGG | - | chr3_4:73373753-73373772 | None:intergenic | 75.0% | |
CGCCCCCGGGTGAGCAACCT+GGG | + | chr3_4:73373751-73373770 | Msa0520850:intron | 75.0% | |
! | CCGCCCCCGGGTGAGCAACC+TGG | + | chr3_4:73373750-73373769 | Msa0520850:intron | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_4 | gene | 73370738 | 73375608 | 73370738 | ID=Msa0520850;Name=Msa0520850 |
chr3_4 | mRNA | 73370738 | 73375608 | 73370738 | ID=Msa0520850-mRNA-1;Parent=Msa0520850;Name=Msa0520850-mRNA-1;_AED=0.15;_eAED=0.15;_QI=0|0.90|0.83|1|0.90|1|12|205|415 |
chr3_4 | exon | 73370738 | 73370745 | 73370738 | ID=Msa0520850-mRNA-1:exon:20541;Parent=Msa0520850-mRNA-1 |
chr3_4 | exon | 73370762 | 73370903 | 73370762 | ID=Msa0520850-mRNA-1:exon:20542;Parent=Msa0520850-mRNA-1 |
chr3_4 | exon | 73371171 | 73371296 | 73371171 | ID=Msa0520850-mRNA-1:exon:20543;Parent=Msa0520850-mRNA-1 |
chr3_4 | exon | 73371810 | 73371873 | 73371810 | ID=Msa0520850-mRNA-1:exon:20544;Parent=Msa0520850-mRNA-1 |
chr3_4 | exon | 73372237 | 73372345 | 73372237 | ID=Msa0520850-mRNA-1:exon:20545;Parent=Msa0520850-mRNA-1 |
chr3_4 | exon | 73372804 | 73372957 | 73372804 | ID=Msa0520850-mRNA-1:exon:20546;Parent=Msa0520850-mRNA-1 |
chr3_4 | exon | 73373161 | 73373286 | 73373161 | ID=Msa0520850-mRNA-1:exon:20547;Parent=Msa0520850-mRNA-1 |
chr3_4 | exon | 73373544 | 73373667 | 73373544 | ID=Msa0520850-mRNA-1:exon:20548;Parent=Msa0520850-mRNA-1 |
chr3_4 | exon | 73374043 | 73374119 | 73374043 | ID=Msa0520850-mRNA-1:exon:20549;Parent=Msa0520850-mRNA-1 |
chr3_4 | exon | 73374292 | 73374344 | 73374292 | ID=Msa0520850-mRNA-1:exon:20550;Parent=Msa0520850-mRNA-1 |
chr3_4 | exon | 73374769 | 73374823 | 73374769 | ID=Msa0520850-mRNA-1:exon:20551;Parent=Msa0520850-mRNA-1 |
chr3_4 | exon | 73375194 | 73375608 | 73375194 | ID=Msa0520850-mRNA-1:exon:20552;Parent=Msa0520850-mRNA-1 |
chr3_4 | CDS | 73370738 | 73370745 | 73370738 | ID=Msa0520850-mRNA-1:cds;Parent=Msa0520850-mRNA-1 |
chr3_4 | CDS | 73370762 | 73370903 | 73370762 | ID=Msa0520850-mRNA-1:cds;Parent=Msa0520850-mRNA-1 |
chr3_4 | CDS | 73371171 | 73371296 | 73371171 | ID=Msa0520850-mRNA-1:cds;Parent=Msa0520850-mRNA-1 |
chr3_4 | CDS | 73371810 | 73371873 | 73371810 | ID=Msa0520850-mRNA-1:cds;Parent=Msa0520850-mRNA-1 |
chr3_4 | CDS | 73372237 | 73372345 | 73372237 | ID=Msa0520850-mRNA-1:cds;Parent=Msa0520850-mRNA-1 |
chr3_4 | CDS | 73372804 | 73372957 | 73372804 | ID=Msa0520850-mRNA-1:cds;Parent=Msa0520850-mRNA-1 |
chr3_4 | CDS | 73373161 | 73373286 | 73373161 | ID=Msa0520850-mRNA-1:cds;Parent=Msa0520850-mRNA-1 |
chr3_4 | CDS | 73373544 | 73373667 | 73373544 | ID=Msa0520850-mRNA-1:cds;Parent=Msa0520850-mRNA-1 |
chr3_4 | CDS | 73374043 | 73374119 | 73374043 | ID=Msa0520850-mRNA-1:cds;Parent=Msa0520850-mRNA-1 |
chr3_4 | CDS | 73374292 | 73374344 | 73374292 | ID=Msa0520850-mRNA-1:cds;Parent=Msa0520850-mRNA-1 |
chr3_4 | CDS | 73374769 | 73374823 | 73374769 | ID=Msa0520850-mRNA-1:cds;Parent=Msa0520850-mRNA-1 |
chr3_4 | CDS | 73375194 | 73375403 | 73375194 | ID=Msa0520850-mRNA-1:cds;Parent=Msa0520850-mRNA-1 |
chr3_4 | three_prime_UTR | 73375404 | 73375608 | 73375404 | ID=Msa0520850-mRNA-1:three_prime_utr;Parent=Msa0520850-mRNA-1 |
Gene Sequence |
Protein sequence |