Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1368710 | XP_003603281.1 | 99.171 | 362 | 3 | 0 | 1 | 362 | 1 | 362 | 0.0 | 751 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1368710 | sp|Q9SZ53|P2C60_ARATH | 79.155 | 355 | 72 | 1 | 1 | 355 | 1 | 353 | 0.0 | 607 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1368710 | G7J9T2 | 99.171 | 362 | 3 | 0 | 1 | 362 | 1 | 362 | 0.0 | 751 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0001830 | Msa1368710 | 0.824399 | 8.244058e-54 | -8.615850e-47 |
Msa1368530 | Msa1368710 | 0.803332 | 3.667186e-49 | -8.615850e-47 |
Msa1368710 | Msa1374830 | 0.972842 | 1.975005e-135 | -8.615850e-47 |
Msa1368710 | Msa1392980 | 0.836777 | 7.670515e-57 | -8.615850e-47 |
Msa1368710 | Msa1457620 | 0.816825 | 4.529899e-52 | -8.615850e-47 |
Msa1368710 | Msa1458090 | 0.833036 | 6.714690e-56 | -8.615850e-47 |
Msa0604290 | Msa1368710 | 0.810303 | 1.232561e-50 | -8.615850e-47 |
Msa0610550 | Msa1368710 | 0.817821 | 2.703206e-52 | -8.615850e-47 |
Msa0693210 | Msa1368710 | 0.804288 | 2.321399e-49 | -8.615850e-47 |
Msa0769970 | Msa1368710 | 0.822835 | 1.915365e-53 | -8.615850e-47 |
Msa0776560 | Msa1368710 | 0.805850 | 1.094034e-49 | -8.615850e-47 |
Msa0808090 | Msa1368710 | 0.803250 | 3.812703e-49 | -8.615850e-47 |
Msa0186540 | Msa1368710 | 0.823137 | 1.628498e-53 | -8.615850e-47 |
Msa0190590 | Msa1368710 | 0.826841 | 2.173949e-54 | -8.615850e-47 |
Msa0232790 | Msa1368710 | 0.817849 | 2.664549e-52 | -8.615850e-47 |
Msa1238840 | Msa1368710 | 0.823543 | 1.309108e-53 | -8.615850e-47 |
Msa1280340 | Msa1368710 | 0.817595 | 3.039405e-52 | -8.615850e-47 |
Msa1315890 | Msa1368710 | 0.820880 | 5.428849e-53 | -8.615850e-47 |
Msa1341060 | Msa1368710 | 0.816012 | 6.885023e-52 | -8.615850e-47 |
Msa0367760 | Msa1368710 | 0.821673 | 3.562139e-53 | -8.615850e-47 |
Msa0385500 | Msa1368710 | 0.842507 | 2.478478e-58 | -8.615850e-47 |
Msa0404630 | Msa1368710 | 0.825993 | 3.460974e-54 | -8.615850e-47 |
Msa0431980 | Msa1368710 | 0.992576 | 4.000561e-194 | -8.615850e-47 |
Msa1065240 | Msa1368710 | 0.810137 | 1.338613e-50 | -8.615850e-47 |
Msa0256140 | Msa1368710 | 0.809139 | 2.192778e-50 | -8.615850e-47 |
Msa0257490 | Msa1368710 | 0.810690 | 1.016954e-50 | -8.615850e-47 |
Msa0259680 | Msa1368710 | 0.814802 | 1.279781e-51 | -8.615850e-47 |
Msa0272300 | Msa1368710 | 0.828156 | 1.051450e-54 | -8.615850e-47 |
Msa0319640 | Msa1368710 | 0.803239 | 3.833358e-49 | -8.615850e-47 |
Msa0341480 | Msa1368710 | 0.813702 | 2.238754e-51 | -8.615850e-47 |
Msa1158640 | Msa1368710 | -0.831506 | 1.606066e-55 | -8.615850e-47 |
Msa1175350 | Msa1368710 | 0.805273 | 1.445609e-49 | -8.615850e-47 |
Msa0520850 | Msa1368710 | 0.995179 | 9.370989e-214 | -8.615850e-47 |
Msa0542560 | Msa1368710 | 0.817069 | 3.992324e-52 | -8.615850e-47 |
Msa0930740 | Msa1368710 | 0.811709 | 6.113944e-51 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1368710 | MtrunA17_Chr3g0136811 | 99.171 | 362 | 3 | 0 | 1 | 362 | 1 | 362 | 0.0 | 751 |
Msa1368710 | MtrunA17_Chr1g0150071 | 78.333 | 360 | 76 | 1 | 1 | 360 | 1 | 358 | 0.0 | 593 |
Msa1368710 | MtrunA17_Chr4g0001761 | 76.338 | 355 | 77 | 2 | 1 | 355 | 1 | 348 | 0.0 | 580 |
Msa1368710 | MtrunA17_Chr4g0007811 | 80.263 | 152 | 6 | 1 | 40 | 191 | 54 | 181 | 1.31e-80 | 245 |
Msa1368710 | MtrunA17_Chr5g0407161 | 31.464 | 321 | 152 | 8 | 22 | 331 | 84 | 347 | 1.69e-41 | 149 |
Msa1368710 | MtrunA17_Chr3g0138281 | 30.904 | 343 | 167 | 9 | 10 | 338 | 70 | 356 | 3.37e-39 | 143 |
Msa1368710 | MtrunA17_Chr5g0435721 | 33.942 | 274 | 134 | 7 | 23 | 291 | 192 | 423 | 6.83e-37 | 139 |
Msa1368710 | MtrunA17_Chr1g0194191 | 30.662 | 287 | 130 | 6 | 22 | 289 | 78 | 314 | 1.15e-34 | 131 |
Msa1368710 | MtrunA17_Chr2g0299981 | 31.395 | 344 | 179 | 11 | 24 | 334 | 221 | 540 | 6.55e-34 | 131 |
Msa1368710 | MtrunA17_Chr3g0136711 | 29.526 | 359 | 169 | 13 | 5 | 349 | 8 | 296 | 1.00e-33 | 126 |
Msa1368710 | MtrunA17_Chr1g0212961 | 32.278 | 316 | 140 | 11 | 19 | 329 | 91 | 337 | 1.09e-33 | 127 |
Msa1368710 | MtrunA17_Chr3g0126511 | 30.088 | 339 | 165 | 10 | 18 | 350 | 89 | 361 | 1.40e-33 | 127 |
Msa1368710 | MtrunA17_Chr1g0150451 | 29.231 | 325 | 160 | 9 | 18 | 337 | 72 | 331 | 2.08e-33 | 126 |
Msa1368710 | MtrunA17_Chr2g0293811 | 30.314 | 287 | 129 | 6 | 21 | 287 | 59 | 294 | 1.25e-32 | 125 |
Msa1368710 | MtrunA17_Chr3g0112291 | 33.333 | 276 | 135 | 9 | 23 | 291 | 92 | 325 | 8.32e-32 | 123 |
Msa1368710 | MtrunA17_Chr4g0070871 | 30.523 | 344 | 156 | 14 | 24 | 330 | 207 | 504 | 2.13e-30 | 121 |
Msa1368710 | MtrunA17_Chr3g0144111 | 34.759 | 187 | 111 | 4 | 143 | 329 | 52 | 227 | 3.76e-30 | 116 |
Msa1368710 | MtrunA17_Chr5g0396731 | 33.106 | 293 | 138 | 6 | 14 | 296 | 63 | 307 | 3.93e-30 | 118 |
Msa1368710 | MtrunA17_Chr6g0483411 | 27.469 | 324 | 159 | 9 | 30 | 331 | 51 | 320 | 4.67e-30 | 117 |
Msa1368710 | MtrunA17_Chr3g0105371 | 27.215 | 316 | 157 | 8 | 24 | 330 | 88 | 339 | 4.94e-30 | 117 |
Msa1368710 | MtrunA17_Chr5g0430481 | 30.797 | 276 | 121 | 8 | 24 | 290 | 124 | 338 | 8.66e-30 | 117 |
Msa1368710 | MtrunA17_Chr3g0105351 | 26.126 | 333 | 171 | 9 | 7 | 330 | 49 | 315 | 9.11e-30 | 116 |
Msa1368710 | MtrunA17_Chr3g0127091 | 28.169 | 355 | 188 | 9 | 22 | 351 | 59 | 371 | 1.20e-29 | 117 |
Msa1368710 | MtrunA17_Chr4g0065141 | 34.104 | 173 | 109 | 1 | 158 | 330 | 184 | 351 | 3.15e-28 | 113 |
Msa1368710 | MtrunA17_Chr8g0389921 | 28.947 | 342 | 163 | 9 | 19 | 330 | 144 | 435 | 1.76e-27 | 112 |
Msa1368710 | MtrunA17_Chr1g0171571 | 29.358 | 327 | 157 | 15 | 22 | 336 | 386 | 650 | 9.77e-27 | 111 |
Msa1368710 | MtrunA17_Chr1g0150781 | 28.669 | 293 | 135 | 5 | 24 | 286 | 240 | 488 | 1.42e-26 | 110 |
Msa1368710 | MtrunA17_Chr4g0050381 | 27.358 | 318 | 154 | 10 | 22 | 330 | 28 | 277 | 2.37e-26 | 106 |
Msa1368710 | MtrunA17_Chr5g0426141 | 28.213 | 319 | 150 | 13 | 22 | 330 | 33 | 282 | 2.43e-26 | 106 |
Msa1368710 | MtrunA17_Chr2g0279151 | 27.358 | 318 | 154 | 10 | 22 | 330 | 32 | 281 | 3.17e-26 | 105 |
Msa1368710 | MtrunA17_Chr3g0135961 | 27.986 | 293 | 142 | 7 | 24 | 286 | 231 | 484 | 4.92e-26 | 108 |
Msa1368710 | MtrunA17_Chr3g0115851 | 30.108 | 279 | 125 | 12 | 22 | 290 | 33 | 251 | 4.82e-25 | 102 |
Msa1368710 | MtrunA17_Chr1g0158781 | 30.514 | 331 | 159 | 11 | 22 | 336 | 111 | 386 | 1.95e-21 | 94.4 |
Msa1368710 | MtrunA17_Chr2g0317021 | 31.638 | 177 | 95 | 5 | 160 | 330 | 177 | 333 | 2.60e-21 | 93.6 |
Msa1368710 | MtrunA17_Chr8g0360351 | 26.298 | 289 | 139 | 8 | 47 | 329 | 61 | 281 | 2.23e-20 | 89.7 |
Msa1368710 | MtrunA17_Chr3g0089721 | 25.364 | 343 | 167 | 11 | 52 | 351 | 68 | 364 | 6.34e-19 | 87.0 |
Msa1368710 | MtrunA17_Chr1g0151781 | 28.929 | 280 | 145 | 10 | 28 | 287 | 43 | 288 | 2.03e-18 | 85.1 |
Msa1368710 | MtrunA17_Chr3g0089711 | 24.773 | 331 | 164 | 10 | 52 | 339 | 68 | 356 | 2.55e-18 | 85.1 |
Msa1368710 | MtrunA17_Chr4g0051661 | 23.239 | 284 | 143 | 8 | 52 | 329 | 183 | 397 | 1.29e-16 | 80.5 |
Msa1368710 | MtrunA17_Chr1g0213351 | 26.119 | 268 | 124 | 8 | 51 | 288 | 79 | 302 | 1.82e-16 | 80.1 |
Msa1368710 | MtrunA17_Chr1g0207571 | 25.965 | 285 | 133 | 9 | 35 | 287 | 46 | 284 | 2.74e-16 | 79.3 |
Msa1368710 | MtrunA17_Chr7g0256751 | 26.159 | 302 | 143 | 11 | 52 | 322 | 69 | 321 | 2.84e-16 | 79.7 |
Msa1368710 | MtrunA17_Chr1g0181901 | 25.623 | 281 | 143 | 9 | 33 | 287 | 57 | 297 | 4.79e-16 | 79.0 |
Msa1368710 | MtrunA17_Chr7g0263281 | 25.263 | 285 | 139 | 10 | 33 | 287 | 52 | 292 | 4.88e-16 | 78.6 |
Msa1368710 | MtrunA17_Chr4g0068971 | 34.507 | 142 | 82 | 3 | 200 | 338 | 110 | 243 | 5.13e-16 | 77.4 |
Msa1368710 | MtrunA17_Chr7g0249421 | 27.491 | 291 | 168 | 10 | 26 | 287 | 68 | 344 | 1.02e-15 | 78.2 |
Msa1368710 | MtrunA17_Chr7g0256771 | 25.407 | 307 | 156 | 10 | 35 | 315 | 54 | 313 | 2.50e-15 | 75.9 |
Msa1368710 | MtrunA17_Chr4g0067711 | 25.161 | 310 | 168 | 11 | 52 | 337 | 91 | 360 | 2.60e-15 | 76.3 |
Msa1368710 | MtrunA17_Chr2g0324061 | 28.873 | 284 | 153 | 11 | 28 | 287 | 65 | 323 | 4.29e-15 | 76.3 |
Msa1368710 | MtrunA17_Chr7g0243571 | 24.398 | 332 | 181 | 11 | 13 | 309 | 46 | 342 | 8.21e-15 | 75.5 |
Msa1368710 | MtrunA17_Chr2g0294291 | 24.254 | 268 | 130 | 7 | 51 | 288 | 74 | 298 | 8.73e-15 | 74.7 |
Msa1368710 | MtrunA17_Chr7g0221691 | 27.857 | 280 | 165 | 9 | 30 | 287 | 105 | 369 | 1.47e-14 | 74.7 |
Msa1368710 | MtrunA17_Chr3g0089691 | 26.471 | 238 | 126 | 7 | 160 | 351 | 51 | 285 | 1.92e-14 | 73.2 |
Msa1368710 | MtrunA17_Chr7g0272061 | 27.132 | 258 | 139 | 9 | 52 | 287 | 91 | 321 | 5.98e-14 | 72.4 |
Msa1368710 | MtrunA17_Chr1g0211251 | 26.217 | 267 | 123 | 10 | 51 | 287 | 80 | 302 | 7.24e-14 | 72.4 |
Msa1368710 | MtrunA17_Chr7g0250061 | 23.574 | 263 | 135 | 8 | 51 | 287 | 75 | 297 | 8.26e-14 | 72.0 |
Msa1368710 | MtrunA17_Chr4g0022171 | 28.826 | 281 | 158 | 10 | 28 | 287 | 71 | 330 | 8.48e-14 | 72.4 |
Msa1368710 | MtrunA17_Chr2g0295401 | 28.125 | 256 | 126 | 13 | 54 | 287 | 94 | 313 | 3.12e-13 | 70.1 |
Msa1368710 | MtrunA17_Chr4g0004971 | 24.460 | 278 | 162 | 10 | 30 | 287 | 54 | 303 | 3.79e-13 | 69.7 |
Msa1368710 | MtrunA17_Chr1g0209451 | 27.885 | 208 | 114 | 6 | 156 | 347 | 128 | 315 | 6.46e-13 | 69.7 |
Msa1368710 | MtrunA17_Chr1g0192421 | 32.653 | 147 | 73 | 4 | 159 | 287 | 172 | 310 | 6.52e-13 | 68.9 |
Msa1368710 | MtrunA17_Chr1g0153671 | 34.437 | 151 | 70 | 6 | 153 | 285 | 120 | 259 | 1.33e-12 | 68.6 |
Msa1368710 | MtrunA17_Chr8g0371321 | 24.911 | 281 | 145 | 9 | 33 | 287 | 60 | 300 | 1.47e-12 | 68.2 |
Msa1368710 | MtrunA17_Chr3g0133801 | 31.944 | 144 | 71 | 5 | 158 | 285 | 128 | 260 | 2.14e-12 | 67.8 |
Msa1368710 | MtrunA17_Chr8g0342431 | 24.590 | 305 | 159 | 11 | 26 | 287 | 58 | 334 | 2.60e-12 | 67.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1368710 | AT4G31860.1 | 79.155 | 355 | 72 | 1 | 1 | 355 | 1 | 353 | 0.0 | 607 |
Msa1368710 | AT2G25070.1 | 76.540 | 341 | 80 | 0 | 1 | 341 | 1 | 341 | 0.0 | 578 |
Msa1368710 | AT2G25070.2 | 76.540 | 341 | 80 | 0 | 1 | 341 | 1 | 341 | 0.0 | 578 |
Msa1368710 | AT4G31860.3 | 82.935 | 293 | 50 | 0 | 1 | 293 | 1 | 293 | 0.0 | 530 |
Msa1368710 | AT4G31860.2 | 84.000 | 275 | 44 | 0 | 1 | 275 | 1 | 275 | 0.0 | 503 |
Msa1368710 | AT2G25620.1 | 30.909 | 330 | 163 | 7 | 23 | 338 | 89 | 367 | 4.73e-38 | 140 |
Msa1368710 | AT2G25620.2 | 30.909 | 330 | 163 | 7 | 23 | 338 | 89 | 367 | 4.73e-38 | 140 |
Msa1368710 | AT5G10740.1 | 31.045 | 335 | 157 | 10 | 4 | 329 | 10 | 279 | 9.19e-38 | 139 |
Msa1368710 | AT5G10740.2 | 31.045 | 335 | 157 | 10 | 4 | 329 | 10 | 279 | 9.19e-38 | 139 |
Msa1368710 | AT5G24940.1 | 31.132 | 318 | 147 | 11 | 18 | 329 | 28 | 279 | 1.15e-36 | 138 |
Msa1368710 | AT3G51470.2 | 28.213 | 319 | 164 | 7 | 22 | 333 | 27 | 287 | 1.60e-36 | 135 |
Msa1368710 | AT3G51470.1 | 28.213 | 319 | 164 | 7 | 22 | 333 | 71 | 331 | 2.19e-36 | 135 |
Msa1368710 | AT2G33700.1 | 29.022 | 317 | 159 | 6 | 23 | 329 | 84 | 344 | 5.71e-36 | 135 |
Msa1368710 | AT4G31750.1 | 28.729 | 362 | 177 | 11 | 7 | 355 | 9 | 302 | 2.14e-34 | 129 |
Msa1368710 | AT4G31750.3 | 28.729 | 362 | 177 | 11 | 7 | 355 | 9 | 302 | 2.14e-34 | 129 |
Msa1368710 | AT1G43900.1 | 30.723 | 332 | 150 | 12 | 4 | 330 | 113 | 369 | 6.97e-34 | 129 |
Msa1368710 | AT4G31750.2 | 29.167 | 336 | 160 | 10 | 7 | 329 | 9 | 279 | 9.17e-34 | 127 |
Msa1368710 | AT1G07430.1 | 33.803 | 284 | 132 | 10 | 21 | 291 | 118 | 358 | 2.80e-33 | 129 |
Msa1368710 | AT1G48040.1 | 30.408 | 319 | 167 | 9 | 33 | 342 | 88 | 360 | 2.36e-32 | 125 |
Msa1368710 | AT5G53140.1 | 30.000 | 350 | 170 | 14 | 14 | 358 | 95 | 374 | 2.78e-32 | 125 |
Msa1368710 | AT5G53140.2 | 30.000 | 350 | 170 | 14 | 14 | 358 | 95 | 374 | 2.78e-32 | 125 |
Msa1368710 | AT2G29380.1 | 32.673 | 303 | 146 | 12 | 4 | 291 | 55 | 314 | 2.51e-31 | 122 |
Msa1368710 | AT4G27800.1 | 28.818 | 347 | 180 | 9 | 22 | 343 | 58 | 362 | 3.36e-31 | 122 |
Msa1368710 | AT1G67820.2 | 33.212 | 274 | 120 | 8 | 24 | 291 | 85 | 301 | 7.60e-31 | 121 |
Msa1368710 | AT1G67820.1 | 33.212 | 274 | 120 | 8 | 24 | 291 | 121 | 337 | 1.18e-30 | 121 |
Msa1368710 | AT3G62260.2 | 29.483 | 329 | 155 | 9 | 22 | 329 | 77 | 349 | 2.22e-30 | 119 |
Msa1368710 | AT3G62260.1 | 29.483 | 329 | 155 | 9 | 22 | 329 | 76 | 348 | 2.39e-30 | 119 |
Msa1368710 | AT3G62260.3 | 29.231 | 325 | 153 | 9 | 36 | 339 | 1 | 269 | 4.60e-30 | 117 |
Msa1368710 | AT1G07160.1 | 27.729 | 339 | 159 | 11 | 7 | 329 | 108 | 376 | 1.46e-29 | 117 |
Msa1368710 | AT4G26080.1 | 29.720 | 286 | 135 | 6 | 24 | 291 | 129 | 366 | 4.07e-29 | 117 |
Msa1368710 | AT3G11410.1 | 32.472 | 271 | 141 | 9 | 19 | 281 | 100 | 336 | 4.47e-29 | 116 |
Msa1368710 | AT5G51760.2 | 29.060 | 351 | 166 | 11 | 24 | 334 | 79 | 386 | 7.51e-29 | 115 |
Msa1368710 | AT5G59220.1 | 32.143 | 280 | 135 | 9 | 23 | 291 | 111 | 346 | 7.86e-29 | 116 |
Msa1368710 | AT5G51760.1 | 29.060 | 351 | 166 | 11 | 24 | 334 | 109 | 416 | 8.25e-29 | 116 |
Msa1368710 | AT4G27800.2 | 30.065 | 306 | 152 | 8 | 22 | 302 | 58 | 326 | 8.90e-29 | 114 |
Msa1368710 | AT5G57050.2 | 28.571 | 329 | 161 | 9 | 24 | 329 | 73 | 350 | 2.60e-28 | 114 |
Msa1368710 | AT4G27800.3 | 29.836 | 305 | 152 | 8 | 22 | 301 | 58 | 325 | 2.67e-28 | 113 |
Msa1368710 | AT5G57050.1 | 28.571 | 329 | 161 | 9 | 24 | 329 | 113 | 390 | 3.72e-28 | 114 |
Msa1368710 | AT1G18030.1 | 29.938 | 324 | 151 | 12 | 30 | 331 | 81 | 350 | 4.88e-28 | 112 |
Msa1368710 | AT1G17550.1 | 31.469 | 286 | 145 | 9 | 24 | 286 | 189 | 446 | 7.24e-28 | 114 |
Msa1368710 | AT1G17550.2 | 31.469 | 286 | 145 | 9 | 24 | 286 | 189 | 446 | 7.24e-28 | 114 |
Msa1368710 | AT2G30020.1 | 28.981 | 314 | 157 | 10 | 24 | 329 | 140 | 395 | 7.47e-28 | 113 |
Msa1368710 | AT3G17250.1 | 27.217 | 327 | 170 | 9 | 32 | 342 | 127 | 401 | 1.47e-27 | 112 |
Msa1368710 | AT1G72770.4 | 31.741 | 293 | 134 | 10 | 24 | 286 | 190 | 446 | 2.73e-27 | 112 |
Msa1368710 | AT1G72770.1 | 31.741 | 293 | 134 | 10 | 24 | 286 | 190 | 446 | 2.73e-27 | 112 |
Msa1368710 | AT1G72770.3 | 31.741 | 293 | 134 | 10 | 24 | 286 | 190 | 446 | 2.73e-27 | 112 |
Msa1368710 | AT1G78200.1 | 28.616 | 318 | 153 | 13 | 22 | 330 | 31 | 283 | 1.70e-26 | 107 |
Msa1368710 | AT1G78200.3 | 28.616 | 318 | 153 | 13 | 22 | 330 | 31 | 283 | 1.70e-26 | 107 |
Msa1368710 | AT1G78200.2 | 28.616 | 318 | 153 | 13 | 22 | 330 | 31 | 283 | 1.70e-26 | 107 |
Msa1368710 | AT2G40860.4 | 28.435 | 313 | 159 | 14 | 31 | 336 | 302 | 556 | 1.39e-25 | 108 |
Msa1368710 | AT2G40860.1 | 28.435 | 313 | 159 | 14 | 31 | 336 | 400 | 654 | 1.66e-25 | 108 |
Msa1368710 | AT2G40180.1 | 28.571 | 322 | 151 | 12 | 24 | 330 | 129 | 386 | 1.84e-25 | 106 |
Msa1368710 | AT1G78200.5 | 28.383 | 303 | 144 | 12 | 36 | 330 | 1 | 238 | 1.98e-24 | 100 |
Msa1368710 | AT1G78200.4 | 28.383 | 303 | 144 | 12 | 36 | 330 | 1 | 238 | 1.98e-24 | 100 |
Msa1368710 | AT2G40860.2 | 29.181 | 281 | 137 | 12 | 31 | 299 | 400 | 630 | 3.11e-23 | 101 |
Msa1368710 | AT1G18030.2 | 30.741 | 270 | 115 | 11 | 30 | 277 | 81 | 300 | 1.62e-22 | 96.7 |
Msa1368710 | AT3G15260.2 | 35.955 | 178 | 86 | 7 | 160 | 330 | 133 | 289 | 8.59e-22 | 94.4 |
Msa1368710 | AT3G15260.1 | 35.955 | 178 | 86 | 7 | 160 | 330 | 133 | 289 | 8.59e-22 | 94.4 |
Msa1368710 | AT4G28400.3 | 27.113 | 284 | 133 | 8 | 52 | 329 | 45 | 260 | 3.28e-21 | 92.0 |
Msa1368710 | AT1G34750.2 | 27.551 | 294 | 142 | 12 | 6 | 290 | 20 | 251 | 4.26e-21 | 92.4 |
Msa1368710 | AT1G34750.1 | 27.551 | 294 | 142 | 12 | 6 | 290 | 20 | 251 | 4.26e-21 | 92.4 |
Msa1368710 | AT1G34750.3 | 27.551 | 294 | 142 | 12 | 6 | 290 | 20 | 251 | 4.26e-21 | 92.4 |
Msa1368710 | AT4G28400.1 | 34.091 | 176 | 90 | 5 | 160 | 329 | 127 | 282 | 7.40e-21 | 91.7 |
Msa1368710 | AT2G20630.1 | 25.614 | 285 | 138 | 8 | 52 | 330 | 63 | 279 | 2.12e-20 | 90.1 |
Msa1368710 | AT5G59220.2 | 33.184 | 223 | 103 | 7 | 23 | 234 | 111 | 298 | 2.68e-20 | 90.5 |
Msa1368710 | AT2G20630.2 | 26.007 | 273 | 130 | 8 | 52 | 311 | 63 | 276 | 3.53e-19 | 87.0 |
Msa1368710 | AT1G72770.2 | 32.510 | 243 | 107 | 8 | 24 | 236 | 190 | 405 | 4.59e-19 | 88.2 |
Msa1368710 | AT1G72770.5 | 32.510 | 243 | 107 | 8 | 24 | 236 | 190 | 405 | 4.59e-19 | 88.2 |
Msa1368710 | AT1G22280.1 | 24.528 | 318 | 163 | 12 | 22 | 330 | 32 | 281 | 1.10e-18 | 85.5 |
Msa1368710 | AT1G34750.4 | 28.315 | 279 | 129 | 12 | 6 | 275 | 20 | 236 | 3.35e-18 | 83.6 |
Msa1368710 | AT5G36250.1 | 28.866 | 291 | 162 | 9 | 26 | 287 | 70 | 344 | 1.04e-17 | 84.3 |
Msa1368710 | AT2G34740.1 | 29.348 | 184 | 103 | 7 | 153 | 329 | 171 | 334 | 1.27e-17 | 83.2 |
Msa1368710 | AT1G22280.3 | 24.149 | 323 | 164 | 12 | 22 | 330 | 32 | 287 | 1.32e-17 | 82.4 |
Msa1368710 | AT5G57050.3 | 30.172 | 232 | 103 | 6 | 24 | 233 | 113 | 307 | 2.75e-17 | 82.0 |
Msa1368710 | AT4G28400.2 | 38.346 | 133 | 65 | 4 | 160 | 286 | 127 | 248 | 4.89e-17 | 80.1 |
Msa1368710 | AT1G16220.1 | 27.113 | 284 | 171 | 8 | 26 | 287 | 67 | 336 | 1.11e-16 | 81.6 |
Msa1368710 | AT3G55050.1 | 25.000 | 268 | 127 | 7 | 51 | 288 | 83 | 306 | 2.56e-16 | 80.1 |
Msa1368710 | AT3G55050.2 | 25.000 | 268 | 127 | 7 | 51 | 288 | 83 | 306 | 2.56e-16 | 80.1 |
Msa1368710 | AT3G12620.2 | 25.000 | 312 | 151 | 9 | 13 | 287 | 39 | 304 | 2.60e-16 | 80.1 |
Msa1368710 | AT3G12620.1 | 25.000 | 312 | 151 | 9 | 13 | 287 | 39 | 304 | 2.60e-16 | 80.1 |
Msa1368710 | AT5G02760.1 | 33.758 | 157 | 72 | 5 | 160 | 288 | 140 | 292 | 2.74e-16 | 79.7 |
Msa1368710 | AT1G03590.1 | 28.772 | 285 | 151 | 11 | 28 | 287 | 65 | 322 | 9.21e-16 | 78.6 |
Msa1368710 | AT4G33920.1 | 25.926 | 297 | 140 | 11 | 24 | 287 | 36 | 285 | 1.09e-15 | 78.2 |
Msa1368710 | AT2G34740.2 | 33.333 | 141 | 71 | 6 | 142 | 275 | 179 | 303 | 1.20e-15 | 77.4 |
Msa1368710 | AT1G79630.1 | 26.923 | 312 | 156 | 12 | 26 | 287 | 70 | 359 | 1.27e-15 | 78.6 |
Msa1368710 | AT2G34740.3 | 33.333 | 141 | 71 | 6 | 142 | 275 | 161 | 285 | 1.30e-15 | 77.0 |
Msa1368710 | AT1G79630.8 | 26.923 | 312 | 156 | 12 | 26 | 287 | 66 | 355 | 1.48e-15 | 78.2 |
Msa1368710 | AT4G03415.1 | 28.114 | 281 | 161 | 9 | 28 | 287 | 72 | 332 | 1.68e-15 | 77.8 |
Msa1368710 | AT4G03415.3 | 28.114 | 281 | 161 | 9 | 28 | 287 | 72 | 332 | 1.68e-15 | 77.8 |
Msa1368710 | AT4G03415.2 | 28.114 | 281 | 161 | 9 | 28 | 287 | 72 | 332 | 1.68e-15 | 77.8 |
Msa1368710 | AT5G26010.1 | 26.756 | 299 | 152 | 11 | 11 | 287 | 30 | 283 | 2.31e-15 | 76.6 |
Msa1368710 | AT3G17090.2 | 25.843 | 267 | 126 | 9 | 51 | 288 | 83 | 306 | 2.63e-15 | 76.3 |
Msa1368710 | AT4G32950.1 | 36.054 | 147 | 68 | 5 | 159 | 287 | 138 | 276 | 3.14e-15 | 76.3 |
Msa1368710 | AT3G63340.5 | 27.660 | 235 | 113 | 6 | 159 | 343 | 232 | 459 | 4.38e-15 | 77.4 |
Msa1368710 | AT3G63340.1 | 27.660 | 235 | 113 | 6 | 159 | 343 | 232 | 459 | 4.38e-15 | 77.4 |
Msa1368710 | AT3G17090.1 | 25.843 | 267 | 126 | 9 | 51 | 288 | 83 | 306 | 4.41e-15 | 76.3 |
Msa1368710 | AT3G63340.7 | 27.660 | 235 | 113 | 6 | 159 | 343 | 232 | 459 | 4.55e-15 | 77.4 |
Msa1368710 | AT3G63340.6 | 27.660 | 235 | 113 | 6 | 159 | 343 | 232 | 459 | 4.79e-15 | 77.0 |
Msa1368710 | AT3G63340.3 | 27.660 | 235 | 113 | 6 | 159 | 343 | 232 | 459 | 4.79e-15 | 77.0 |
Msa1368710 | AT3G63340.10 | 27.660 | 235 | 113 | 6 | 159 | 343 | 232 | 459 | 4.79e-15 | 77.0 |
Msa1368710 | AT3G63340.4 | 27.660 | 235 | 113 | 6 | 159 | 343 | 232 | 459 | 4.79e-15 | 77.0 |
Msa1368710 | AT3G63340.8 | 27.660 | 235 | 113 | 6 | 159 | 343 | 232 | 459 | 4.98e-15 | 77.0 |
Msa1368710 | AT3G63340.11 | 27.660 | 235 | 113 | 6 | 159 | 343 | 232 | 459 | 6.68e-15 | 76.6 |
Msa1368710 | AT1G79630.6 | 34.694 | 147 | 70 | 4 | 159 | 287 | 111 | 249 | 7.04e-15 | 75.9 |
Msa1368710 | AT1G79630.3 | 34.694 | 147 | 70 | 4 | 159 | 287 | 111 | 249 | 7.04e-15 | 75.9 |
Msa1368710 | AT1G79630.4 | 34.694 | 147 | 70 | 4 | 159 | 287 | 111 | 249 | 7.04e-15 | 75.9 |
Msa1368710 | AT1G79630.5 | 34.694 | 147 | 70 | 4 | 159 | 287 | 111 | 249 | 7.04e-15 | 75.9 |
Msa1368710 | AT1G79630.2 | 34.694 | 147 | 70 | 4 | 159 | 287 | 151 | 289 | 9.49e-15 | 75.5 |
Msa1368710 | AT1G79630.7 | 34.694 | 147 | 70 | 4 | 159 | 287 | 151 | 289 | 9.49e-15 | 75.5 |
Msa1368710 | AT3G63340.12 | 27.660 | 235 | 113 | 6 | 159 | 343 | 232 | 459 | 1.01e-14 | 75.9 |
Msa1368710 | AT3G16800.4 | 34.228 | 149 | 71 | 5 | 159 | 288 | 74 | 214 | 1.05e-14 | 73.6 |
Msa1368710 | AT3G16800.6 | 34.228 | 149 | 71 | 5 | 159 | 288 | 74 | 214 | 1.05e-14 | 73.6 |
Msa1368710 | AT4G38520.2 | 26.136 | 264 | 127 | 7 | 51 | 287 | 80 | 302 | 1.24e-14 | 75.1 |
Msa1368710 | AT4G38520.1 | 26.136 | 264 | 127 | 7 | 51 | 287 | 80 | 302 | 1.24e-14 | 75.1 |
Msa1368710 | AT3G02750.2 | 34.694 | 147 | 70 | 3 | 159 | 287 | 215 | 353 | 1.65e-14 | 75.1 |
Msa1368710 | AT3G02750.1 | 34.694 | 147 | 70 | 3 | 159 | 287 | 215 | 353 | 1.65e-14 | 75.1 |
Msa1368710 | AT5G36250.2 | 27.541 | 305 | 162 | 10 | 26 | 287 | 70 | 358 | 1.67e-14 | 75.1 |
Msa1368710 | AT3G16800.2 | 34.228 | 149 | 71 | 5 | 159 | 288 | 169 | 309 | 1.89e-14 | 73.9 |
Msa1368710 | AT3G16800.1 | 34.228 | 149 | 71 | 5 | 159 | 288 | 169 | 309 | 1.89e-14 | 73.9 |
Msa1368710 | AT3G16800.3 | 34.228 | 149 | 71 | 5 | 159 | 288 | 169 | 309 | 1.89e-14 | 73.9 |
Msa1368710 | AT5G27930.1 | 28.125 | 256 | 131 | 9 | 52 | 287 | 92 | 314 | 1.91e-14 | 74.3 |
Msa1368710 | AT5G27930.2 | 28.125 | 256 | 131 | 9 | 52 | 287 | 92 | 314 | 1.91e-14 | 74.3 |
Msa1368710 | AT3G51370.1 | 23.596 | 267 | 130 | 8 | 51 | 287 | 78 | 300 | 1.20e-13 | 72.0 |
Msa1368710 | AT3G51370.3 | 23.596 | 267 | 130 | 8 | 51 | 287 | 78 | 300 | 1.20e-13 | 72.0 |
Msa1368710 | AT5G66080.1 | 23.596 | 267 | 130 | 9 | 51 | 287 | 81 | 303 | 1.32e-13 | 72.0 |
Msa1368710 | AT3G63340.2 | 31.875 | 160 | 95 | 4 | 191 | 343 | 340 | 492 | 1.99e-13 | 72.4 |
Msa1368710 | AT5G06750.3 | 24.176 | 273 | 126 | 8 | 52 | 289 | 82 | 308 | 9.49e-13 | 69.3 |
Msa1368710 | AT5G06750.1 | 24.176 | 273 | 126 | 8 | 52 | 289 | 82 | 308 | 9.49e-13 | 69.3 |
Msa1368710 | AT5G01700.1 | 25.436 | 287 | 150 | 11 | 26 | 287 | 1 | 248 | 3.57e-12 | 67.0 |
Msa1368710 | AT5G01700.2 | 25.436 | 287 | 150 | 11 | 26 | 287 | 50 | 297 | 6.51e-12 | 66.6 |
Msa1368710 | AT3G05640.2 | 30.323 | 155 | 82 | 5 | 151 | 287 | 163 | 309 | 6.73e-12 | 66.6 |
Msa1368710 | AT3G05640.1 | 30.323 | 155 | 82 | 5 | 151 | 287 | 163 | 309 | 6.73e-12 | 66.6 |
Msa1368710 | AT3G05640.3 | 30.323 | 155 | 82 | 5 | 151 | 287 | 163 | 309 | 6.73e-12 | 66.6 |
Msa1368710 | AT3G51370.2 | 27.848 | 158 | 80 | 4 | 160 | 287 | 62 | 215 | 1.00e-11 | 65.5 |
Msa1368710 | AT4G33920.3 | 30.864 | 162 | 77 | 6 | 158 | 287 | 14 | 172 | 1.86e-11 | 64.3 |
Msa1368710 | AT4G33920.2 | 30.864 | 162 | 77 | 6 | 158 | 287 | 44 | 202 | 2.37e-11 | 64.3 |
Msa1368710 | AT5G66080.2 | 26.582 | 158 | 82 | 4 | 160 | 287 | 46 | 199 | 2.54e-11 | 63.9 |
Msa1368710 | AT5G06750.2 | 28.834 | 163 | 79 | 5 | 160 | 289 | 68 | 226 | 8.22e-11 | 62.8 |
Find 87 sgRNAs with CRISPR-Local
Find 295 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTGTGATGAAGATGAGTTTA+TGG | 0.265435 | tig0018650:+175175 | Msa1368710:CDS |
AAACTTACAGTGTTTATATC+TGG | 0.272615 | tig0018650:-174980 | None:intergenic |
ACTTCGCTTCTTTCCACTTT+CGG | 0.325357 | tig0018650:-176252 | None:intergenic |
TTAAACCTTGCAAGAGCTAT+TGG | 0.340623 | tig0018650:+174520 | Msa1368710:CDS |
GCATACTTAGCTGGAGATAT+AGG | 0.353334 | tig0018650:+173168 | Msa1368710:CDS |
GAAAATGACCGTCTTAGATA+TGG | 0.379194 | tig0018650:+172103 | Msa1368710:CDS |
AAGTTCAGTGGGATGATAGA+AGG | 0.381756 | tig0018650:+173743 | Msa1368710:CDS |
TCCTTCTCAATCTCAAGATC+AGG | 0.384503 | tig0018650:-174445 | None:intergenic |
CCTTCGCCACCAGCAGTTGA+TGG | 0.406279 | tig0018650:-176120 | None:intergenic |
GGATGATAGAAGGGTTGATT+TGG | 0.408042 | tig0018650:+173753 | Msa1368710:CDS |
GTATTAACCGAGTTGATGAT+TGG | 0.410347 | tig0018650:+173795 | Msa1368710:CDS |
ATGGAGGGAGCTATCAATCT+TGG | 0.415716 | tig0018650:+173706 | Msa1368710:CDS |
ACCAAGTACTGGGCACTTCA+TGG | 0.418333 | tig0018650:-176456 | None:intergenic |
GATGATGATTGCTCTTCTGC+AGG | 0.424321 | tig0018650:-176201 | None:intergenic |
GCAAGGCTGGCGTGCATCAA+TGG | 0.439275 | tig0018650:+172138 | Msa1368710:CDS |
TTGCTCTTCTGCAGGTGCAC+TGG | 0.443233 | tig0018650:-176193 | None:intergenic |
CAATCTCAAGATCAGGTTTG+TGG | 0.448649 | tig0018650:-174438 | None:intergenic |
GGTGTTAAATGAAAGGAGAA+TGG | 0.450263 | tig0018650:-176435 | None:intergenic |
AGTTCATGAACTACTGTGTT+CGG | 0.451450 | tig0018650:+175677 | Msa1368710:CDS |
ATACATTATATATATAGAAA+GGG | 0.452074 | tig0018650:-176346 | None:intergenic |
TATACATTATATATATAGAA+AGG | 0.454883 | tig0018650:-176347 | None:intergenic |
AAGAGTACTTGACCGGTGTT+TGG | 0.457534 | tig0018650:+176095 | Msa1368710:CDS |
TTTGAACTGCACCAAGATCA+TGG | 0.459378 | tig0018650:-176157 | None:intergenic |
CAGCATTTGCAACAACAACT+TGG | 0.462852 | tig0018650:-174101 | None:intergenic |
ACCATGAAGTGCCCAGTACT+TGG | 0.465399 | tig0018650:+176455 | Msa1368710:three_prime_UTR |
AGTTGATGATTGGGCCTTTG+AGG | 0.465711 | tig0018650:+173805 | Msa1368710:CDS |
GCAGGTGCACTGGACTGAGC+AGG | 0.465899 | tig0018650:-176183 | None:intergenic |
GCATGCTGCATATACTGATC+TGG | 0.467368 | tig0018650:+172681 | Msa1368710:intron |
TTAATACCATTGCTGCTTCG+TGG | 0.468931 | tig0018650:-173779 | None:intergenic |
GATAAGATAAACAAGTTCAG+TGG | 0.469232 | tig0018650:+173731 | Msa1368710:CDS |
TACAGTGTTTATATCTGGAT+TGG | 0.469339 | tig0018650:-174975 | None:intergenic |
CTGCTTGTCAAGTCAACAAT+TGG | 0.471070 | tig0018650:+175647 | Msa1368710:CDS |
ATCACATGTTGAACCGAAAG+TGG | 0.477597 | tig0018650:+176239 | Msa1368710:CDS |
TAGACATGAGAACCAAGTAC+TGG | 0.480598 | tig0018650:-176467 | None:intergenic |
CAATTGCTCTTCCTCTGCTC+AGG | 0.484154 | tig0018650:+171757 | Msa1368710:five_prime_UTR |
CAAGTTGTTGTTGCAAATGC+TGG | 0.490892 | tig0018650:+174102 | Msa1368710:CDS |
TGCTAGCTTGTGATGGCATA+TGG | 0.491268 | tig0018650:+175198 | Msa1368710:CDS |
GTGTTAAATGAAAGGAGAAT+GGG | 0.494985 | tig0018650:-176434 | None:intergenic |
TGTAATATCTCGGAAGGGCC+AGG | 0.495009 | tig0018650:+174137 | Msa1368710:CDS |
CCATCAACTGCTGGTGGCGA+AGG | 0.496781 | tig0018650:+176120 | Msa1368710:CDS |
TTAATACAGAAGATAGCAAT+GGG | 0.501982 | tig0018650:+172034 | Msa1368710:intron |
TGGAGGGAGCTATCAATCTT+GGG | 0.503649 | tig0018650:+173707 | Msa1368710:CDS |
GGTTCAACATGTGATTCAGC+TGG | 0.506557 | tig0018650:-176231 | None:intergenic |
TGATAACATGACCATGATCT+TGG | 0.508668 | tig0018650:+176146 | Msa1368710:CDS |
TCAGAAGAAGAAGATTGATA+AGG | 0.513547 | tig0018650:-171697 | None:intergenic |
AAGGAAAGAATCTTAAAAGC+TGG | 0.515169 | tig0018650:+174463 | Msa1368710:CDS |
CAGGCTGTGCTTCCTGAAGT+TGG | 0.537802 | tig0018650:-174057 | None:intergenic |
TTTGGCGTTTATGATGGTCA+TGG | 0.539479 | tig0018650:+172721 | Msa1368710:CDS |
TATTAACCGAGTTGATGATT+GGG | 0.540196 | tig0018650:+173796 | Msa1368710:CDS |
GAAATTGAATGAAGTAACTC+AGG | 0.547194 | tig0018650:-171671 | None:intergenic |
GTTTCTAATAACTGCAACAC+AGG | 0.558516 | tig0018650:-174076 | None:intergenic |
TTTAATACAGAAGATAGCAA+TGG | 0.559141 | tig0018650:+172033 | Msa1368710:intron |
ATAAGATAAACAAGTTCAGT+GGG | 0.564058 | tig0018650:+173732 | Msa1368710:CDS |
AGTTACCAATAGCTCTTGCA+AGG | 0.565687 | tig0018650:-174525 | None:intergenic |
TGATGCGTGGTCAAAGAGGA+TGG | 0.567410 | tig0018650:+173687 | Msa1368710:CDS |
ACTCAGGCAGAAGAAGAAGA+AGG | 0.574206 | tig0018650:-171655 | None:intergenic |
ATTCAGATGCAATATATCAC+AGG | 0.577550 | tig0018650:-176410 | None:intergenic |
TTTATGGTGCTAGCTTGTGA+TGG | 0.580225 | tig0018650:+175191 | Msa1368710:CDS |
ATTCGCGTTGTGTAATATCT+CGG | 0.580696 | tig0018650:+174127 | Msa1368710:CDS |
TCAATTCATTGTAGGTGACA+TGG | 0.582161 | tig0018650:+174904 | Msa1368710:intron |
GAAAGAATCTTAAAAGCTGG+TGG | 0.582557 | tig0018650:+174466 | Msa1368710:CDS |
GCGTTGTGTAATATCTCGGA+AGG | 0.584039 | tig0018650:+174131 | Msa1368710:CDS |
TACATTATATATATAGAAAG+GGG | 0.584054 | tig0018650:-176345 | None:intergenic |
GTTTATCATCAATGCAAGGC+TGG | 0.589422 | tig0018650:+172125 | Msa1368710:CDS |
CAGTTGATGGTGCCAAACAC+CGG | 0.590786 | tig0018650:-176107 | None:intergenic |
TGGTCTCCACGAAGCAGCAA+TGG | 0.594647 | tig0018650:+173773 | Msa1368710:CDS |
ACTTCATGGTGTTAAATGAA+AGG | 0.597498 | tig0018650:-176442 | None:intergenic |
AGTTCAGTGGGATGATAGAA+GGG | 0.599134 | tig0018650:+173744 | Msa1368710:CDS |
GCGTGGTCAAAGAGGATGGA+GGG | 0.599400 | tig0018650:+173691 | Msa1368710:CDS |
CAAAGGCCCAATCATCAACT+CGG | 0.600050 | tig0018650:-173802 | None:intergenic |
ATGATAAACCATATCTAAGA+CGG | 0.602011 | tig0018650:-172111 | None:intergenic |
ACCTGATCTTGAGATTGAGA+AGG | 0.604677 | tig0018650:+174444 | Msa1368710:CDS |
TGTTTGGCACCATCAACTGC+TGG | 0.605486 | tig0018650:+176111 | Msa1368710:CDS |
ATTCATGCAGGACGAGTGAA+CGG | 0.606384 | tig0018650:+174493 | Msa1368710:CDS |
TGATGATTGGGCCTTTGAGG+AGG | 0.617991 | tig0018650:+173808 | Msa1368710:CDS |
AGACATGAGAACCAAGTACT+GGG | 0.626098 | tig0018650:-176466 | None:intergenic |
TGTCAGACCTACCTCCTCAA+AGG | 0.629378 | tig0018650:-173819 | None:intergenic |
GGTCCAGCAAAATCAGAATG+AGG | 0.630449 | tig0018650:-174036 | None:intergenic |
TATGGTTTATCATCAATGCA+AGG | 0.642455 | tig0018650:+172121 | Msa1368710:CDS |
GGCGTTTATGATGGTCATGG+AGG | 0.652696 | tig0018650:+172724 | Msa1368710:CDS |
AAGCATGCGTACCTGAGCAG+AGG | 0.662812 | tig0018650:-171768 | None:intergenic |
GAGATGATGCGTGGTCAAAG+AGG | 0.678107 | tig0018650:+173683 | Msa1368710:CDS |
TGTGTGAAAGAGTACTTGAC+CGG | 0.686232 | tig0018650:+176088 | Msa1368710:CDS |
CGTTGTGTAATATCTCGGAA+GGG | 0.694273 | tig0018650:+174132 | Msa1368710:CDS |
TTGGCACCATCAACTGCTGG+TGG | 0.700424 | tig0018650:+176114 | Msa1368710:CDS |
TGCGTGGTCAAAGAGGATGG+AGG | 0.715747 | tig0018650:+173690 | Msa1368710:CDS |
AGAATGGATGAGATGATGCG+TGG | 0.759110 | tig0018650:+173674 | Msa1368710:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TGTAATTTGAATTTATTTTT+TGG | + | tig0018650:174004-174023 | Msa1368710:intron | 10.0% |
!!! | ATCAATTATTATTTTAAGAA+AGG | - | tig0018650:175606-175625 | None:intergenic | 10.0% |
!! | ATACATTATATATATAGAAA+GGG | - | tig0018650:176349-176368 | None:intergenic | 10.0% |
!! | TATACATTATATATATAGAA+AGG | - | tig0018650:176350-176369 | None:intergenic | 10.0% |
!! | CTTTATATATTAAAGAGAAA+AGG | - | tig0018650:173372-173391 | None:intergenic | 15.0% |
!! | AAACATACTTAAGTAAATTT+CGG | - | tig0018650:173416-173435 | None:intergenic | 15.0% |
!! | AATATTATGTCTTTATTCTT+TGG | + | tig0018650:175352-175371 | Msa1368710:intron | 15.0% |
!!! | AAAATAATAATTGATTTCCT+TGG | + | tig0018650:175611-175630 | Msa1368710:intron | 15.0% |
!!! | AAATAATAATTGATTTCCTT+GGG | + | tig0018650:175612-175631 | Msa1368710:intron | 15.0% |
!! | TACATTATATATATAGAAAG+GGG | - | tig0018650:176348-176367 | None:intergenic | 15.0% |
!! | TAAAAATCAAGAAAATGAGA+GGG | - | tig0018650:171847-171866 | None:intergenic | 20.0% |
!! | TTAAAAATCAAGAAAATGAG+AGG | - | tig0018650:171848-171867 | None:intergenic | 20.0% |
!! | TTCTGTATTAAAACAAAACA+GGG | - | tig0018650:172025-172044 | None:intergenic | 20.0% |
!! | GAATAAGATATACAAAACAA+AGG | - | tig0018650:173344-173363 | None:intergenic | 20.0% |
!!! | ATTTCAGATTTTAGTTTAGA+GGG | - | tig0018650:173617-173636 | None:intergenic | 20.0% |
!!! | TGAATTTATTTTTTGGAATC+AGG | + | tig0018650:174011-174030 | Msa1368710:intron | 20.0% |
!!! | GAATTTATTTTTTGGAATCA+GGG | + | tig0018650:174012-174031 | Msa1368710:intron | 20.0% |
!!! | AGATTTTTTATAGGATTTGA+GGG | + | tig0018650:174838-174857 | Msa1368710:intron | 20.0% |
!! | AATTGAGATATATCAAAGAT+AGG | - | tig0018650:174890-174909 | None:intergenic | 20.0% |
!!! | TTTGTTTTGACACTTATTAT+AGG | + | tig0018650:175145-175164 | Msa1368710:intron | 20.0% |
!! | TAGAAAAATAATTAAGCAGA+AGG | - | tig0018650:175499-175518 | None:intergenic | 20.0% |
!! | TAATACTTCATCTTCTTATT+AGG | - | tig0018650:175728-175747 | None:intergenic | 20.0% |
! | AAGGATTAGATAACAAAAAC+AGG | - | tig0018650:171812-171831 | None:intergenic | 25.0% |
! | TTTATACTATGAACAAATCG+AGG | - | tig0018650:171922-171941 | None:intergenic | 25.0% |
! | CTTCTGTATTAAAACAAAAC+AGG | - | tig0018650:172026-172045 | None:intergenic | 25.0% |
! | TTTAATACAGAAGATAGCAA+TGG | + | tig0018650:172033-172052 | Msa1368710:intron | 25.0% |
! | TTAATACAGAAGATAGCAAT+GGG | + | tig0018650:172034-172053 | Msa1368710:intron | 25.0% |
! | ATGATAAACCATATCTAAGA+CGG | - | tig0018650:172114-172133 | None:intergenic | 25.0% |
!!! | TGTGGTATATTTGTTGATTT+TGG | + | tig0018650:172270-172289 | Msa1368710:intron | 25.0% |
!!! | GTGGTATATTTGTTGATTTT+GGG | + | tig0018650:172271-172290 | Msa1368710:intron | 25.0% |
! | CATTGTTTGAAAAGATTCAA+AGG | + | tig0018650:172382-172401 | Msa1368710:intron | 25.0% |
!! | AAACTTAAAAGCGTAATTGA+TGG | - | tig0018650:172448-172467 | None:intergenic | 25.0% |
!!! | GATAAGTCTACTTCATTTTT+TGG | + | tig0018650:172703-172722 | Msa1368710:CDS | 25.0% |
! | AGGTAAGATTTGAAAATGTT+TGG | + | tig0018650:172744-172763 | Msa1368710:intron | 25.0% |
! | GATTATTGAGATCTGTAAAT+TGG | - | tig0018650:173023-173042 | None:intergenic | 25.0% |
!! | TTACCTGAAAATTTTGGATT+CGG | - | tig0018650:173093-173112 | None:intergenic | 25.0% |
! | TTGTGTAAATAAGTGACAAT+TGG | + | tig0018650:173251-173270 | Msa1368710:intron | 25.0% |
!! | GTTTTTACTGATAATCCAAA+TGG | - | tig0018650:173322-173341 | None:intergenic | 25.0% |
! | CATGATCATAACTAACAAAT+AGG | - | tig0018650:173504-173523 | None:intergenic | 25.0% |
!! | CTATTTGTTAGTTATGATCA+TGG | + | tig0018650:173502-173521 | Msa1368710:intron | 25.0% |
!!! | TTTCAGATTTTAGTTTAGAG+GGG | - | tig0018650:173616-173635 | None:intergenic | 25.0% |
!!! | CATTTCAGATTTTAGTTTAG+AGG | - | tig0018650:173618-173637 | None:intergenic | 25.0% |
! | CTCTAAACTAAAATCTGAAA+TGG | + | tig0018650:173616-173635 | Msa1368710:intron | 25.0% |
!! | ATTTTCAATACTATGCAGAA+TGG | + | tig0018650:173658-173677 | Msa1368710:intron | 25.0% |
! | ATAAGATAAACAAGTTCAGT+GGG | + | tig0018650:173732-173751 | Msa1368710:CDS | 25.0% |
!! | GACAAATCATTTTCAAAAAG+AGG | - | tig0018650:174303-174322 | None:intergenic | 25.0% |
! | TTTCTAAGTGATAAATCTTG+CGG | + | tig0018650:174355-174374 | Msa1368710:intron | 25.0% |
! | GATTATAATTGGAAAAAGAG+GGG | - | tig0018650:174605-174624 | None:intergenic | 25.0% |
! | GGATTATAATTGGAAAAAGA+GGG | - | tig0018650:174606-174625 | None:intergenic | 25.0% |
!!! | TCTTCAGAGAGATTTTTTAT+AGG | + | tig0018650:174829-174848 | Msa1368710:intron | 25.0% |
!!! | GAGATTTTTTATAGGATTTG+AGG | + | tig0018650:174837-174856 | Msa1368710:intron | 25.0% |
!!! | GATTTTTTATAGGATTTGAG+GGG | + | tig0018650:174839-174858 | Msa1368710:intron | 25.0% |
! | GATATATCTCAATTCATTGT+AGG | + | tig0018650:174896-174915 | Msa1368710:intron | 25.0% |
! | AAACTTACAGTGTTTATATC+TGG | - | tig0018650:174983-175002 | None:intergenic | 25.0% |
!! | CACATTTTCCATTTTCTTTA+TGG | + | tig0018650:175055-175074 | Msa1368710:intron | 25.0% |
! | CCATGCATTATACTATTTAT+GGG | - | tig0018650:175086-175105 | None:intergenic | 25.0% |
! | ACCATGCATTATACTATTTA+TGG | - | tig0018650:175087-175106 | None:intergenic | 25.0% |
! | ATTAATAGGATTTCCATTCT+AGG | + | tig0018650:175312-175331 | Msa1368710:intron | 25.0% |
! | AGTGTAATTTACTCATATAG+AGG | - | tig0018650:175403-175422 | None:intergenic | 25.0% |
!!! | TTTGATTCTGGAATTAGTTT+CGG | + | tig0018650:175559-175578 | Msa1368710:intron | 25.0% |
! | AAAAATAGCAGAATGCTTAT+CGG | - | tig0018650:175830-175849 | None:intergenic | 25.0% |
GAAATTGAATGAAGTAACTC+AGG | - | tig0018650:171674-171693 | None:intergenic | 30.0% | |
TCAGAAGAAGAAGATTGATA+AGG | - | tig0018650:171700-171719 | None:intergenic | 30.0% | |
! | TCAGAAAACTTTTCGGTTTT+GGG | - | tig0018650:172076-172095 | None:intergenic | 30.0% |
! | ATCAGAAAACTTTTCGGTTT+TGG | - | tig0018650:172077-172096 | None:intergenic | 30.0% |
TATGGTTTATCATCAATGCA+AGG | + | tig0018650:172121-172140 | Msa1368710:CDS | 30.0% | |
TGAGAGATATTGATGTTATC+AGG | + | tig0018650:172327-172346 | Msa1368710:intron | 30.0% | |
GAGAGATATTGATGTTATCA+GGG | + | tig0018650:172328-172347 | Msa1368710:intron | 30.0% | |
TATTGATGTTATCAGGGTAA+CGG | + | tig0018650:172334-172353 | Msa1368710:intron | 30.0% | |
TGCAATTTCAGGAATATATG+TGG | + | tig0018650:172419-172438 | Msa1368710:intron | 30.0% | |
!!! | TCATTTTTTGGCGTTTATGA+TGG | + | tig0018650:172715-172734 | Msa1368710:CDS | 30.0% |
! | TGAAAAGTGCATAAGCTTAA+GGG | + | tig0018650:172837-172856 | Msa1368710:intron | 30.0% |
!! | TTTGGATTGATGGTGTAAAA+TGG | + | tig0018650:172864-172883 | Msa1368710:intron | 30.0% |
!! | ATTGATGGTGTAAAATGGAA+TGG | + | tig0018650:172869-172888 | Msa1368710:intron | 30.0% |
! | TTACCGAATCCAAAATTTTC+AGG | + | tig0018650:173087-173106 | Msa1368710:intron | 30.0% |
!!! | GAATCCAAAATTTTCAGGTA+AGG | + | tig0018650:173092-173111 | Msa1368710:intron | 30.0% |
!!! | CTTCATTTTTTAGCATCTGT+TGG | - | tig0018650:173149-173168 | None:intergenic | 30.0% |
AAAAATGAAGCATACTTAGC+TGG | + | tig0018650:173159-173178 | Msa1368710:CDS | 30.0% | |
!! | TAAAAAAGCTTGTTGAAGAG+AGG | - | tig0018650:173196-173215 | None:intergenic | 30.0% |
!!! | CTCTTCAACAAGCTTTTTTA+AGG | + | tig0018650:173196-173215 | Msa1368710:CDS | 30.0% |
GTCACTTATTTACACAATAC+AGG | - | tig0018650:173248-173267 | None:intergenic | 30.0% | |
TTACTGATAATCCAAATGGA+AGG | - | tig0018650:173318-173337 | None:intergenic | 30.0% | |
TACTTAAGTATGTTTCATGC+TGG | + | tig0018650:173421-173440 | Msa1368710:intron | 30.0% | |
!!! | TTCAGATTTTAGTTTAGAGG+GGG | - | tig0018650:173615-173634 | None:intergenic | 30.0% |
AATGGAACTTAGTTATGAAC+TGG | + | tig0018650:173634-173653 | Msa1368710:intron | 30.0% | |
GATAAGATAAACAAGTTCAG+TGG | + | tig0018650:173731-173750 | Msa1368710:CDS | 30.0% | |
!! | TATTAACCGAGTTGATGATT+GGG | + | tig0018650:173796-173815 | Msa1368710:CDS | 30.0% |
ACAACTTAGTTGGATATACT+TGG | + | tig0018650:173873-173892 | Msa1368710:intron | 30.0% | |
! | GTTGGATATACTTGGTAATT+AGG | + | tig0018650:173881-173900 | Msa1368710:intron | 30.0% |
! | AAATGATTTGTCTCTTTCTC+TGG | + | tig0018650:174311-174330 | Msa1368710:intron | 30.0% |
AAGGAAAGAATCTTAAAAGC+TGG | + | tig0018650:174463-174482 | Msa1368710:CDS | 30.0% | |
CGGATTATAATTGGAAAAAG+AGG | - | tig0018650:174607-174626 | None:intergenic | 30.0% | |
! | TTTCCTTGTATGCTGTATTT+TGG | + | tig0018650:174722-174741 | Msa1368710:intron | 30.0% |
TACAGTGTTTATATCTGGAT+TGG | - | tig0018650:174978-174997 | None:intergenic | 30.0% | |
AGTTTATGTGTATCACTTAG+TGG | - | tig0018650:175023-175042 | None:intergenic | 30.0% | |
CCCATAAATAGTATAATGCA+TGG | + | tig0018650:175083-175102 | Msa1368710:intron | 30.0% | |
TTGTGATGAAGATGAGTTTA+TGG | + | tig0018650:175175-175194 | Msa1368710:CDS | 30.0% | |
TCACAACATTCAGAATCATA+TGG | - | tig0018650:175248-175267 | None:intergenic | 30.0% | |
TGTCATAGTTATTCAGAGAT+TGG | + | tig0018650:175761-175780 | Msa1368710:intron | 30.0% | |
ATGATATTGAATGCAGTACT+TGG | + | tig0018650:175796-175815 | Msa1368710:intron | 30.0% | |
CTAGTCGTTATAAAAGACAA+TGG | - | tig0018650:175976-175995 | None:intergenic | 30.0% | |
TTACAGATCAGCTGATTAAT+AGG | - | tig0018650:176038-176057 | None:intergenic | 30.0% | |
ATTCAGATGCAATATATCAC+AGG | - | tig0018650:176413-176432 | None:intergenic | 30.0% | |
GTGTTAAATGAAAGGAGAAT+GGG | - | tig0018650:176437-176456 | None:intergenic | 30.0% | |
! | ACTTCATGGTGTTAAATGAA+AGG | - | tig0018650:176445-176464 | None:intergenic | 30.0% |
ATGAACAAATCGAGGAGTTA+AGG | - | tig0018650:171914-171933 | None:intergenic | 35.0% | |
! | ACCGAAAAGTTTTCTGATGA+CGG | + | tig0018650:172079-172098 | Msa1368710:CDS | 35.0% |
GAAAATGACCGTCTTAGATA+TGG | + | tig0018650:172103-172122 | Msa1368710:CDS | 35.0% | |
AGCCTCATTCAACATTTCTA+CGG | + | tig0018650:172224-172243 | Msa1368710:intron | 35.0% | |
!!! | GGGTATTGTTTTAGTATGTG+AGG | + | tig0018650:172245-172264 | Msa1368710:intron | 35.0% |
!! | GTTTTAGTATGTGAGGATTG+TGG | + | tig0018650:172252-172271 | Msa1368710:intron | 35.0% |
ACATCAATATCTCTCAACCA+GGG | - | tig0018650:172323-172342 | None:intergenic | 35.0% | |
AACATCAATATCTCTCAACC+AGG | - | tig0018650:172324-172343 | None:intergenic | 35.0% | |
ATTGATGTTATCAGGGTAAC+GGG | + | tig0018650:172335-172354 | Msa1368710:intron | 35.0% | |
ATCCAGTCAATTGCAATTTC+AGG | + | tig0018650:172408-172427 | Msa1368710:intron | 35.0% | |
TTCCTGAAATTGCAATTGAC+TGG | - | tig0018650:172413-172432 | None:intergenic | 35.0% | |
AATCATCATCAGCACAACAA+TGG | - | tig0018650:172530-172549 | None:intergenic | 35.0% | |
GTATGCTGCATATACTAATC+TGG | + | tig0018650:172571-172590 | Msa1368710:intron | 35.0% | |
!!! | TCGTGTTTTGGTGTTTATGA+TGG | + | tig0018650:172605-172624 | Msa1368710:intron | 35.0% |
TCATCAGCATACTAATGAAG+TGG | - | tig0018650:172636-172655 | None:intergenic | 35.0% | |
TGTTTGGCTACTTGAATTGA+TGG | + | tig0018650:172760-172779 | Msa1368710:intron | 35.0% | |
CACAATGGAAAGTAGACATT+TGG | - | tig0018650:172819-172838 | None:intergenic | 35.0% | |
! | AGCTTATGCACTTTTCACAA+TGG | - | tig0018650:172834-172853 | None:intergenic | 35.0% |
! | GTGAAAAGTGCATAAGCTTA+AGG | + | tig0018650:172836-172855 | Msa1368710:intron | 35.0% |
GGTGTAAAATGGAATGGAAT+AGG | + | tig0018650:172875-172894 | Msa1368710:intron | 35.0% | |
!! | TATGTTTGGATTGGTGGTAT+AGG | - | tig0018650:172950-172969 | None:intergenic | 35.0% |
TTTGCAAAAGTTGCAAGTGT+GGG | - | tig0018650:172974-172993 | None:intergenic | 35.0% | |
ATTTGCAAAAGTTGCAAGTG+TGG | - | tig0018650:172975-172994 | None:intergenic | 35.0% | |
! | CACTTGCAACTTTTGCAAAT+AGG | + | tig0018650:172975-172994 | Msa1368710:intron | 35.0% |
!!! | TCCAAAATTTTCAGGTAAGG+TGG | + | tig0018650:173095-173114 | Msa1368710:intron | 35.0% |
! | ACCACCTTACCTGAAAATTT+TGG | - | tig0018650:173099-173118 | None:intergenic | 35.0% |
TATTTACACAATACAGGCAG+AGG | - | tig0018650:173242-173261 | None:intergenic | 35.0% | |
! | GTGACAATTGGTTTCATGTT+TGG | + | tig0018650:173263-173282 | Msa1368710:intron | 35.0% |
TGTTTCATGCTGGACTAATT+TGG | + | tig0018650:173431-173450 | Msa1368710:intron | 35.0% | |
GTTTCATGCTGGACTAATTT+GGG | + | tig0018650:173432-173451 | Msa1368710:intron | 35.0% | |
!! | GTATTAACCGAGTTGATGAT+TGG | + | tig0018650:173795-173814 | Msa1368710:CDS | 35.0% |
CAACAGTATCACAACTTAGT+TGG | + | tig0018650:173863-173882 | Msa1368710:intron | 35.0% | |
GCAATGAAATATCATGCTCT+TGG | + | tig0018650:173910-173929 | Msa1368710:intron | 35.0% | |
ACTCACATAAACAAGCATGT+CGG | - | tig0018650:173956-173975 | None:intergenic | 35.0% | |
GTTTCTAATAACTGCAACAC+AGG | - | tig0018650:174079-174098 | None:intergenic | 35.0% | |
ATTCGCGTTGTGTAATATCT+CGG | + | tig0018650:174127-174146 | Msa1368710:CDS | 35.0% | |
!! | ATTTCCATTCTAGAGTTACC+TGG | - | tig0018650:174158-174177 | None:intergenic | 35.0% |
GAAAGAATCTTAAAAGCTGG+TGG | + | tig0018650:174466-174485 | Msa1368710:CDS | 35.0% | |
TTAAACCTTGCAAGAGCTAT+TGG | + | tig0018650:174520-174539 | Msa1368710:CDS | 35.0% | |
AAAAAAGTTCACAATCCCAG+AGG | - | tig0018650:174552-174571 | None:intergenic | 35.0% | |
AAAAAGAGGGGCAACAAAAA+TGG | - | tig0018650:174593-174612 | None:intergenic | 35.0% | |
ATCCTGAGCTAAAGATACAA+AGG | - | tig0018650:174657-174676 | None:intergenic | 35.0% | |
GAACCAAAATACAGCATACA+AGG | - | tig0018650:174728-174747 | None:intergenic | 35.0% | |
!!! | CTGTATTTTGGTTCTTCACA+AGG | + | tig0018650:174734-174753 | Msa1368710:intron | 35.0% |
! | TCTCTGAAGAAATCAGTGTT+AGG | - | tig0018650:174819-174838 | None:intergenic | 35.0% |
TCAATTCATTGTAGGTGACA+TGG | + | tig0018650:174904-174923 | Msa1368710:intron | 35.0% | |
GGGATCTACCATAAAGAAAA+TGG | - | tig0018650:175066-175085 | None:intergenic | 35.0% | |
TATGTCTTTATTCTTTGGCG+TGG | + | tig0018650:175357-175376 | Msa1368710:intron | 35.0% | |
ATGTCTTTATTCTTTGGCGT+GGG | + | tig0018650:175358-175377 | Msa1368710:intron | 35.0% | |
GTCTTACTATTGTTGACACT+TGG | + | tig0018650:175536-175555 | Msa1368710:intron | 35.0% | |
! | TGATTTCCTTGGGTTATTTC+AGG | + | tig0018650:175622-175641 | Msa1368710:intron | 35.0% |
! | GATTTCCTTGGGTTATTTCA+GGG | + | tig0018650:175623-175642 | Msa1368710:intron | 35.0% |
AGTTCATGAACTACTGTGTT+CGG | + | tig0018650:175677-175696 | Msa1368710:CDS | 35.0% | |
CACATCACATTTCTTTACCA+TGG | + | tig0018650:175902-175921 | Msa1368710:intron | 35.0% | |
TCAATGGATGTAGAACATCA+TGG | - | tig0018650:175935-175954 | None:intergenic | 35.0% | |
ATTAAAGCCTAGTGCATCAA+TGG | - | tig0018650:175951-175970 | None:intergenic | 35.0% | |
ATTTCACGTAATGCACTAGA+AGG | + | tig0018650:175997-176016 | Msa1368710:intron | 35.0% | |
TGATAACATGACCATGATCT+TGG | + | tig0018650:176146-176165 | Msa1368710:CDS | 35.0% | |
GGTGTTAAATGAAAGGAGAA+TGG | - | tig0018650:176438-176457 | None:intergenic | 35.0% | |
GAGGAGTTAAGGAATCAAGA+AGG | - | tig0018650:171903-171922 | None:intergenic | 40.0% | |
! | GCCGTCATCAGAAAACTTTT+CGG | - | tig0018650:172083-172102 | None:intergenic | 40.0% |
GTTTATCATCAATGCAAGGC+TGG | + | tig0018650:172125-172144 | Msa1368710:CDS | 40.0% | |
GCCTCATTCAACATTTCTAC+GGG | + | tig0018650:172225-172244 | Msa1368710:intron | 40.0% | |
ACCCGTAGAAATGTTGAATG+AGG | - | tig0018650:172229-172248 | None:intergenic | 40.0% | |
GCAGCATACTAACAAACGAA+AGG | - | tig0018650:172560-172579 | None:intergenic | 40.0% | |
GCTGCATATACTAATCTGGA+TGG | + | tig0018650:172575-172594 | Msa1368710:intron | 40.0% | |
!! | GATGGCTCTATTTCGTGTTT+TGG | + | tig0018650:172593-172612 | Msa1368710:intron | 40.0% |
TTTGGCGTTTATGATGGTCA+TGG | + | tig0018650:172721-172740 | Msa1368710:CDS | 40.0% | |
! | CATAAGCTTAAGGGTGTGTT+TGG | + | tig0018650:172846-172865 | Msa1368710:intron | 40.0% |
! | TAAGGGTGTGTTTGGATTGA+TGG | + | tig0018650:172854-172873 | Msa1368710:intron | 40.0% |
TGGTATAGGATGGAATGGTA+TGG | - | tig0018650:172936-172955 | None:intergenic | 40.0% | |
! | ATTGGTGGTATAGGATGGAA+TGG | - | tig0018650:172941-172960 | None:intergenic | 40.0% |
!! | TTTGGATTGGTGGTATAGGA+TGG | - | tig0018650:172946-172965 | None:intergenic | 40.0% |
TTGCAAAAGTTGCAAGTGTG+GGG | - | tig0018650:172973-172992 | None:intergenic | 40.0% | |
GCATACTTAGCTGGAGATAT+AGG | + | tig0018650:173168-173187 | Msa1368710:CDS | 40.0% | |
GCTGTTCAAAACCTTCCATT+TGG | + | tig0018650:173304-173323 | Msa1368710:intron | 40.0% | |
TCATGTCTACTCGGTAATGT+TGG | - | tig0018650:173562-173581 | None:intergenic | 40.0% | |
TGTCACACTTCATGTCTACT+CGG | - | tig0018650:173571-173590 | None:intergenic | 40.0% | |
AAGTTCAGTGGGATGATAGA+AGG | + | tig0018650:173743-173762 | Msa1368710:CDS | 40.0% | |
AGTTCAGTGGGATGATAGAA+GGG | + | tig0018650:173744-173763 | Msa1368710:CDS | 40.0% | |
! | GGATGATAGAAGGGTTGATT+TGG | + | tig0018650:173753-173772 | Msa1368710:CDS | 40.0% |
! | TTAATACCATTGCTGCTTCG+TGG | - | tig0018650:173782-173801 | None:intergenic | 40.0% |
! | ATACTTGGTAATTAGGTGCC+TGG | + | tig0018650:173888-173907 | Msa1368710:intron | 40.0% |
GAGCATGATATTTCATTGCC+AGG | - | tig0018650:173909-173928 | None:intergenic | 40.0% | |
CTCACATAAACAAGCATGTC+GGG | - | tig0018650:173955-173974 | None:intergenic | 40.0% | |
CAGCATTTGCAACAACAACT+TGG | - | tig0018650:174104-174123 | None:intergenic | 40.0% | |
! | CAAGTTGTTGTTGCAAATGC+TGG | + | tig0018650:174102-174121 | Msa1368710:CDS | 40.0% |
CGTTGTGTAATATCTCGGAA+GGG | + | tig0018650:174132-174151 | Msa1368710:CDS | 40.0% | |
GTTACTTGACTACTGCACAT+TGG | + | tig0018650:174264-174283 | Msa1368710:intron | 40.0% | |
! | TAACTGCAGCTCTTTTCTGT+AGG | + | tig0018650:174396-174415 | Msa1368710:intron | 40.0% |
CAATCTCAAGATCAGGTTTG+TGG | - | tig0018650:174441-174460 | None:intergenic | 40.0% | |
ACCTGATCTTGAGATTGAGA+AGG | + | tig0018650:174444-174463 | Msa1368710:CDS | 40.0% | |
TCCTTCTCAATCTCAAGATC+AGG | - | tig0018650:174448-174467 | None:intergenic | 40.0% | |
AGTTACCAATAGCTCTTGCA+AGG | - | tig0018650:174528-174547 | None:intergenic | 40.0% | |
! | AGCTATTGGTAACTTCCTCT+GGG | + | tig0018650:174534-174553 | Msa1368710:intron | 40.0% |
! | TTGGTTCTTCACAAGGCATT+AGG | + | tig0018650:174741-174760 | Msa1368710:intron | 40.0% |
! | TTCACAAGGCATTAGGAGTT+TGG | + | tig0018650:174748-174767 | Msa1368710:intron | 40.0% |
TAGGATTTGAGGGGTGAAAT+TGG | + | tig0018650:174848-174867 | Msa1368710:intron | 40.0% | |
AGGATTTGAGGGGTGAAATT+GGG | + | tig0018650:174849-174868 | Msa1368710:intron | 40.0% | |
!! | GTTACAACTTGCTTTTCAGC+AGG | - | tig0018650:174953-174972 | None:intergenic | 40.0% |
! | TTTATGGTGCTAGCTTGTGA+TGG | + | tig0018650:175191-175210 | Msa1368710:CDS | 40.0% |
TCCATTCTAGGCACACATAT+AGG | + | tig0018650:175324-175343 | Msa1368710:intron | 40.0% | |
TCCTCATGTATAGACACTGA+TGG | + | tig0018650:175427-175446 | Msa1368710:intron | 40.0% | |
TCCATCAGTGTCTATACATG+AGG | - | tig0018650:175431-175450 | None:intergenic | 40.0% | |
TTCTAGACACATGTGAGTTG+AGG | + | tig0018650:175514-175533 | Msa1368710:intron | 40.0% | |
! | GTTGACACTTGGTTTGATTC+TGG | + | tig0018650:175547-175566 | Msa1368710:intron | 40.0% |
TTTAAGAAAGGCAGTACGAG+AGG | - | tig0018650:175594-175613 | None:intergenic | 40.0% | |
CTGCTTGTCAAGTCAACAAT+TGG | + | tig0018650:175647-175666 | Msa1368710:CDS | 40.0% | |
AATAGCAGAATGCTTATCGG+TGG | - | tig0018650:175827-175846 | None:intergenic | 40.0% | |
TTGCTTGCAATTAGTGTGAG+AGG | + | tig0018650:175848-175867 | Msa1368710:intron | 40.0% | |
CACATTTCTTTACCATGGAC+AGG | + | tig0018650:175907-175926 | Msa1368710:intron | 40.0% | |
TCTACATCCATTGATGCACT+AGG | + | tig0018650:175941-175960 | Msa1368710:intron | 40.0% | |
CTGATCTGTAATTATGCTGC+AGG | + | tig0018650:176047-176066 | Msa1368710:intron | 40.0% | |
!! | TGTGTGAAAGAGTACTTGAC+CGG | + | tig0018650:176088-176107 | Msa1368710:CDS | 40.0% |
TTTGAACTGCACCAAGATCA+TGG | - | tig0018650:176160-176179 | None:intergenic | 40.0% | |
ATCACATGTTGAACCGAAAG+TGG | + | tig0018650:176239-176258 | Msa1368710:CDS | 40.0% | |
ACTTCGCTTCTTTCCACTTT+CGG | - | tig0018650:176255-176274 | None:intergenic | 40.0% | |
ACTCAGGCAGAAGAAGAAGA+AGG | - | tig0018650:171658-171677 | None:intergenic | 45.0% | |
GAGAGGGACGATGATTGAAA+AGG | - | tig0018650:171831-171850 | None:intergenic | 45.0% | |
!! | TGATTTTGGGCACTGCGTAA+TGG | + | tig0018650:172284-172303 | Msa1368710:intron | 45.0% |
!! | GATTTTGGGCACTGCGTAAT+GGG | + | tig0018650:172285-172304 | Msa1368710:intron | 45.0% |
CTCAACCAGGGTGATAAGTT+AGG | - | tig0018650:172311-172330 | None:intergenic | 45.0% | |
GCATGCTGCATATACTGATC+TGG | + | tig0018650:172681-172700 | Msa1368710:intron | 45.0% | |
AGTGTGGGGTATGTTTGGAT+TGG | - | tig0018650:172959-172978 | None:intergenic | 45.0% | |
TTGCAAGTGTGGGGTATGTT+TGG | - | tig0018650:172964-172983 | None:intergenic | 45.0% | |
GCTGGACTAATTTGGGAGTA+TGG | + | tig0018650:173439-173458 | Msa1368710:intron | 45.0% | |
!! | CTACTCGGTAATGTTGGTTC+TGG | - | tig0018650:173556-173575 | None:intergenic | 45.0% |
AGAATGGATGAGATGATGCG+TGG | + | tig0018650:173674-173693 | Msa1368710:intron | 45.0% | |
ATGGAGGGAGCTATCAATCT+TGG | + | tig0018650:173706-173725 | Msa1368710:CDS | 45.0% | |
TGGAGGGAGCTATCAATCTT+GGG | + | tig0018650:173707-173726 | Msa1368710:CDS | 45.0% | |
CAAAGGCCCAATCATCAACT+CGG | - | tig0018650:173805-173824 | None:intergenic | 45.0% | |
!! | AGTTGATGATTGGGCCTTTG+AGG | + | tig0018650:173805-173824 | Msa1368710:CDS | 45.0% |
GAGGTAGGTCTGACATTTGA+AGG | + | tig0018650:173827-173846 | Msa1368710:intron | 45.0% | |
! | GGACCTCATTCTGATTTTGC+TGG | + | tig0018650:174033-174052 | Msa1368710:CDS | 45.0% |
GGTCCAGCAAAATCAGAATG+AGG | - | tig0018650:174039-174058 | None:intergenic | 45.0% | |
! | GATTTTGCTGGACCAACTTC+AGG | + | tig0018650:174045-174064 | Msa1368710:CDS | 45.0% |
GCGTTGTGTAATATCTCGGA+AGG | + | tig0018650:174131-174150 | Msa1368710:CDS | 45.0% | |
!!! | GCTGGTGGTTTTATTCATGC+AGG | + | tig0018650:174481-174500 | Msa1368710:CDS | 45.0% |
ATTCATGCAGGACGAGTGAA+CGG | + | tig0018650:174493-174512 | Msa1368710:CDS | 45.0% | |
! | GAGCTATTGGTAACTTCCTC+TGG | + | tig0018650:174533-174552 | Msa1368710:intron | 45.0% |
TTCCAATTATAATCCGCCCC+CGG | + | tig0018650:174611-174630 | Msa1368710:intron | 45.0% | |
! | GGCCTTTGTATCTTTAGCTC+AGG | + | tig0018650:174652-174671 | Msa1368710:intron | 45.0% |
! | TGCTAGCTTGTGATGGCATA+TGG | + | tig0018650:175198-175217 | Msa1368710:CDS | 45.0% |
GCCTATATGTGTGCCTAGAA+TGG | - | tig0018650:175328-175347 | None:intergenic | 45.0% | |
AACATCATGGATCCTGTCCA+TGG | - | tig0018650:175922-175941 | None:intergenic | 45.0% | |
ACGTAATGCACTAGAAGGTC+TGG | + | tig0018650:176002-176021 | Msa1368710:intron | 45.0% | |
!! | AAGAGTACTTGACCGGTGTT+TGG | + | tig0018650:176095-176114 | Msa1368710:CDS | 45.0% |
GATGATGATTGCTCTTCTGC+AGG | - | tig0018650:176204-176223 | None:intergenic | 45.0% | |
GGTTCAACATGTGATTCAGC+TGG | - | tig0018650:176234-176253 | None:intergenic | 45.0% | |
!!! | AATTTTTTATAAATTGATTA+AGG | + | tig0018650:172189-172208 | Msa1368710:intron | 5.0% |
!! | ATTAAAATGTAATAATTAAT+AGG | + | tig0018650:175298-175317 | Msa1368710:intron | 5.0% |
CAATTGCTCTTCCTCTGCTC+AGG | + | tig0018650:171757-171776 | Msa1368710:five_prime_UTR | 50.0% | |
ATGGGCCTAACTTATCACCC+TGG | + | tig0018650:172303-172322 | Msa1368710:intron | 50.0% | |
GGCGTTTATGATGGTCATGG+AGG | + | tig0018650:172724-172743 | Msa1368710:CDS | 50.0% | |
! | GTGGGGTATGTTTGGATTGG+TGG | - | tig0018650:172956-172975 | None:intergenic | 50.0% |
GAGATGATGCGTGGTCAAAG+AGG | + | tig0018650:173683-173702 | Msa1368710:CDS | 50.0% | |
TGATGCGTGGTCAAAGAGGA+TGG | + | tig0018650:173687-173706 | Msa1368710:CDS | 50.0% | |
! | TGATGATTGGGCCTTTGAGG+AGG | + | tig0018650:173808-173827 | Msa1368710:CDS | 50.0% |
TGTCAGACCTACCTCCTCAA+AGG | - | tig0018650:173822-173841 | None:intergenic | 50.0% | |
TGTAATATCTCGGAAGGGCC+AGG | + | tig0018650:174137-174156 | Msa1368710:CDS | 50.0% | |
! | AGGGCCAGGTAACTCTAGAA+TGG | + | tig0018650:174151-174170 | Msa1368710:intron | 50.0% |
TCCAATTATAATCCGCCCCC+GGG | + | tig0018650:174612-174631 | Msa1368710:intron | 50.0% | |
GCAGTCCCTGAAATAACCCA+AGG | - | tig0018650:175631-175650 | None:intergenic | 50.0% | |
!! | CAGTTGATGGTGCCAAACAC+CGG | - | tig0018650:176110-176129 | None:intergenic | 50.0% |
TGTTTGGCACCATCAACTGC+TGG | + | tig0018650:176111-176130 | Msa1368710:CDS | 50.0% | |
! | ACCATGAAGTGCCCAGTACT+TGG | + | tig0018650:176455-176474 | Msa1368710:three_prime_UTR | 50.0% |
!! | ACCAAGTACTGGGCACTTCA+TGG | - | tig0018650:176459-176478 | None:intergenic | 50.0% |
AAGCATGCGTACCTGAGCAG+AGG | - | tig0018650:171771-171790 | None:intergenic | 55.0% | |
TGCGTGGTCAAAGAGGATGG+AGG | + | tig0018650:173690-173709 | Msa1368710:CDS | 55.0% | |
GCGTGGTCAAAGAGGATGGA+GGG | + | tig0018650:173691-173710 | Msa1368710:CDS | 55.0% | |
TGGTCTCCACGAAGCAGCAA+TGG | + | tig0018650:173773-173792 | Msa1368710:CDS | 55.0% | |
! | GATTGGGCCTTTGAGGAGGT+AGG | + | tig0018650:173812-173831 | Msa1368710:intron | 55.0% |
CAGGCTGTGCTTCCTGAAGT+TGG | - | tig0018650:174060-174079 | None:intergenic | 55.0% | |
!! | ACCCGGGGGCGGATTATAAT+TGG | - | tig0018650:174616-174635 | None:intergenic | 55.0% |
AGATACAAAGGCCCTTGCCC+AGG | - | tig0018650:174645-174664 | None:intergenic | 55.0% | |
TTGGCACCATCAACTGCTGG+TGG | + | tig0018650:176114-176133 | Msa1368710:CDS | 55.0% | |
TTGCTCTTCTGCAGGTGCAC+TGG | - | tig0018650:176196-176215 | None:intergenic | 55.0% | |
GCAAGGCTGGCGTGCATCAA+TGG | + | tig0018650:172138-172157 | Msa1368710:CDS | 60.0% | |
CCTTCGCCACCAGCAGTTGA+TGG | - | tig0018650:176123-176142 | None:intergenic | 60.0% | |
! | CCATCAACTGCTGGTGGCGA+AGG | + | tig0018650:176120-176139 | Msa1368710:CDS | 60.0% |
TTGCCCAGGTTGCTCACCCG+GGG | - | tig0018650:174631-174650 | None:intergenic | 65.0% | |
CTTGCCCAGGTTGCTCACCC+GGG | - | tig0018650:174632-174651 | None:intergenic | 65.0% | |
CCTTGCCCAGGTTGCTCACC+CGG | - | tig0018650:174633-174652 | None:intergenic | 65.0% | |
CGGGTGAGCAACCTGGGCAA+GGG | + | tig0018650:174631-174650 | Msa1368710:intron | 65.0% | |
GCAGGTGCACTGGACTGAGC+AGG | - | tig0018650:176186-176205 | None:intergenic | 65.0% | |
TGCCCAGGTTGCTCACCCGG+GGG | - | tig0018650:174630-174649 | None:intergenic | 70.0% | |
CCGGGTGAGCAACCTGGGCA+AGG | + | tig0018650:174630-174649 | Msa1368710:intron | 70.0% | |
CCAGGTTGCTCACCCGGGGG+CGG | - | tig0018650:174627-174646 | None:intergenic | 75.0% | |
CGCCCCCGGGTGAGCAACCT+GGG | + | tig0018650:174625-174644 | Msa1368710:intron | 75.0% | |
! | CCGCCCCCGGGTGAGCAACC+TGG | + | tig0018650:174624-174643 | Msa1368710:intron | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
tig0018650 | gene | 171579 | 176483 | 171579 | ID=Msa1368710;Name=Msa1368710 |
tig0018650 | mRNA | 171579 | 176483 | 171579 | ID=Msa1368710-mRNA-1;Parent=Msa1368710;Name=Msa1368710-mRNA-1;_AED=0.14;_eAED=0.14;_QI=209|1|1|1|1|1|11|205|362 |
tig0018650 | exon | 171579 | 171778 | 171579 | ID=Msa1368710-mRNA-1:exon:571;Parent=Msa1368710-mRNA-1 |
tig0018650 | exon | 172043 | 172168 | 172043 | ID=Msa1368710-mRNA-1:exon:572;Parent=Msa1368710-mRNA-1 |
tig0018650 | exon | 172682 | 172745 | 172682 | ID=Msa1368710-mRNA-1:exon:573;Parent=Msa1368710-mRNA-1 |
tig0018650 | exon | 173109 | 173217 | 173109 | ID=Msa1368710-mRNA-1:exon:574;Parent=Msa1368710-mRNA-1 |
tig0018650 | exon | 173676 | 173829 | 173676 | ID=Msa1368710-mRNA-1:exon:575;Parent=Msa1368710-mRNA-1 |
tig0018650 | exon | 174033 | 174158 | 174033 | ID=Msa1368710-mRNA-1:exon:576;Parent=Msa1368710-mRNA-1 |
tig0018650 | exon | 174418 | 174541 | 174418 | ID=Msa1368710-mRNA-1:exon:577;Parent=Msa1368710-mRNA-1 |
tig0018650 | exon | 174918 | 174994 | 174918 | ID=Msa1368710-mRNA-1:exon:578;Parent=Msa1368710-mRNA-1 |
tig0018650 | exon | 175167 | 175219 | 175167 | ID=Msa1368710-mRNA-1:exon:579;Parent=Msa1368710-mRNA-1 |
tig0018650 | exon | 175644 | 175698 | 175644 | ID=Msa1368710-mRNA-1:exon:580;Parent=Msa1368710-mRNA-1 |
tig0018650 | exon | 176069 | 176483 | 176069 | ID=Msa1368710-mRNA-1:exon:581;Parent=Msa1368710-mRNA-1 |
tig0018650 | five_prime_UTR | 171579 | 171778 | 171579 | ID=Msa1368710-mRNA-1:five_prime_utr;Parent=Msa1368710-mRNA-1 |
tig0018650 | five_prime_UTR | 172043 | 172051 | 172043 | ID=Msa1368710-mRNA-1:five_prime_utr;Parent=Msa1368710-mRNA-1 |
tig0018650 | CDS | 172052 | 172168 | 172052 | ID=Msa1368710-mRNA-1:cds;Parent=Msa1368710-mRNA-1 |
tig0018650 | CDS | 172682 | 172745 | 172682 | ID=Msa1368710-mRNA-1:cds;Parent=Msa1368710-mRNA-1 |
tig0018650 | CDS | 173109 | 173217 | 173109 | ID=Msa1368710-mRNA-1:cds;Parent=Msa1368710-mRNA-1 |
tig0018650 | CDS | 173676 | 173829 | 173676 | ID=Msa1368710-mRNA-1:cds;Parent=Msa1368710-mRNA-1 |
tig0018650 | CDS | 174033 | 174158 | 174033 | ID=Msa1368710-mRNA-1:cds;Parent=Msa1368710-mRNA-1 |
tig0018650 | CDS | 174418 | 174541 | 174418 | ID=Msa1368710-mRNA-1:cds;Parent=Msa1368710-mRNA-1 |
tig0018650 | CDS | 174918 | 174994 | 174918 | ID=Msa1368710-mRNA-1:cds;Parent=Msa1368710-mRNA-1 |
tig0018650 | CDS | 175167 | 175219 | 175167 | ID=Msa1368710-mRNA-1:cds;Parent=Msa1368710-mRNA-1 |
tig0018650 | CDS | 175644 | 175698 | 175644 | ID=Msa1368710-mRNA-1:cds;Parent=Msa1368710-mRNA-1 |
tig0018650 | CDS | 176069 | 176278 | 176069 | ID=Msa1368710-mRNA-1:cds;Parent=Msa1368710-mRNA-1 |
tig0018650 | three_prime_UTR | 176279 | 176483 | 176279 | ID=Msa1368710-mRNA-1:three_prime_utr;Parent=Msa1368710-mRNA-1 |
Gene Sequence |
Protein sequence |