Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1027070 | XP_003623690.1 | 98.921 | 556 | 4 | 1 | 1 | 554 | 1 | 556 | 0.0 | 1123 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1027070 | sp|Q42908|PMGI_MESCR | 87.253 | 557 | 68 | 2 | 1 | 554 | 1 | 557 | 0.0 | 1018 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1027070 | B7FLD9 | 98.921 | 556 | 4 | 1 | 1 | 554 | 1 | 556 | 0.0 | 1123 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0007850 | Msa1027070 | 0.831500 | 1.611811e-55 | -8.615850e-47 |
| Msa0056270 | Msa1027070 | 0.828221 | 1.013926e-54 | -8.615850e-47 |
| Msa0095360 | Msa1027070 | 0.816558 | 5.199338e-52 | -8.615850e-47 |
| Msa0095770 | Msa1027070 | 0.815019 | 1.145761e-51 | -8.615850e-47 |
| Msa0656810 | Msa1027070 | 0.801731 | 7.839761e-49 | -8.615850e-47 |
| Msa0689440 | Msa1027070 | 0.819637 | 1.046141e-52 | -8.615850e-47 |
| Msa0746170 | Msa1027070 | 0.810687 | 1.018230e-50 | -8.615850e-47 |
| Msa0746210 | Msa1027070 | 0.813511 | 2.466770e-51 | -8.615850e-47 |
| Msa0149440 | Msa1027070 | 0.806962 | 6.376165e-50 | -8.615850e-47 |
| Msa0194350 | Msa1027070 | -0.811418 | 7.072232e-51 | -8.615850e-47 |
| Msa1027070 | Msa1065240 | 0.861921 | 7.304078e-64 | -8.615850e-47 |
| Msa1027070 | Msa1070390 | 0.806896 | 6.582787e-50 | -8.615850e-47 |
| Msa1027070 | Msa1110860 | 0.814458 | 1.524960e-51 | -8.615850e-47 |
| Msa1027070 | Msa1205480 | 0.823359 | 1.445532e-53 | -8.615850e-47 |
| Msa1027070 | Msa1420660 | 0.810634 | 1.045397e-50 | -8.615850e-47 |
| Msa1027070 | Msa1433600 | 0.808180 | 3.515824e-50 | -8.615850e-47 |
| Msa1027070 | Msa1458090 | 0.844366 | 7.902684e-59 | -8.615850e-47 |
| Msa0244970 | Msa1027070 | 0.803288 | 3.744642e-49 | -8.615850e-47 |
| Msa0491000 | Msa1027070 | 0.807100 | 5.959961e-50 | -8.615850e-47 |
| Msa0523810 | Msa1027070 | 0.839528 | 1.501882e-57 | -8.615850e-47 |
| Msa0542560 | Msa1027070 | 0.806104 | 9.672214e-50 | -8.615850e-47 |
| Msa0870750 | Msa1027070 | 0.807779 | 4.278877e-50 | -8.615850e-47 |
| Msa0883520 | Msa1027070 | 0.823740 | 1.176927e-53 | -8.615850e-47 |
| Msa0913240 | Msa1027070 | 0.804221 | 2.396893e-49 | -8.615850e-47 |
| Msa0973420 | Msa1027070 | 0.823589 | 1.276830e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1027070 | MtrunA17_Chr7g0245561 | 98.921 | 556 | 4 | 1 | 1 | 554 | 1 | 556 | 0.0 | 1123 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1027070 | AT1G09780.1 | 84.144 | 555 | 85 | 2 | 3 | 554 | 2 | 556 | 0.0 | 964 |
| Msa1027070 | AT3G08590.1 | 82.616 | 558 | 93 | 3 | 1 | 554 | 1 | 558 | 0.0 | 952 |
| Msa1027070 | AT3G08590.2 | 82.616 | 558 | 93 | 3 | 1 | 554 | 1 | 558 | 0.0 | 952 |
Find 157 sgRNAs with CRISPR-Local
Find 303 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTACTAATATACCTGTTTA+AGG | 0.133335 | 7_1:-59301706 | None:intergenic |
| ATCTCCAAAGCCTTCATTAA+TGG | 0.187385 | 7_1:-59304794 | None:intergenic |
| TTTGTACAGTTGTTGCTTAA+AGG | 0.258662 | 7_1:+59303145 | Msa1027070:intron |
| GACAGTTGCTGTTATTGTTT+TGG | 0.277615 | 7_1:+59301613 | Msa1027070:CDS |
| TGCTGCCCTCAATGTCTTGA+TGG | 0.289323 | 7_1:-59304127 | None:intergenic |
| GTCTTTCCCTTTGGTAGCTT+AGG | 0.293931 | 7_1:-59301593 | None:intergenic |
| TACTGATGGTCGTGATGTTT+TGG | 0.304185 | 7_1:+59303210 | Msa1027070:CDS |
| ACTTCCAACTGAGGATGATA+TGG | 0.315941 | 7_1:+59301856 | Msa1027070:CDS |
| CACGACCATCAGTAAGAATA+TGG | 0.334028 | 7_1:-59303201 | None:intergenic |
| CATTCCTCCACACTTGTTTG+TGG | 0.335160 | 7_1:+59305846 | Msa1027070:three_prime_UTR |
| CTGAACATTGGAGATTGGTT+AGG | 0.338075 | 7_1:+59301813 | Msa1027070:CDS |
| AATTCAACAGGTTAAGGTTT+TGG | 0.344300 | 7_1:+59301268 | Msa1027070:five_prime_UTR |
| GTTGACATTGCTCTAGAAAC+TGG | 0.347541 | 7_1:+59302929 | Msa1027070:CDS |
| CCAGAGATCGACAGGACTTC+TGG | 0.356747 | 7_1:+59304405 | Msa1027070:CDS |
| CAACACAATTCAACAGGTTA+AGG | 0.357106 | 7_1:+59301262 | Msa1027070:five_prime_UTR |
| CTTCAGTTATGTTTGGCAAC+TGG | 0.372380 | 7_1:+59306047 | Msa1027070:three_prime_UTR |
| TCTTTCCCTTTGGTAGCTTA+GGG | 0.372466 | 7_1:-59301592 | None:intergenic |
| AGTTGTGCTGAATAATAATC+AGG | 0.373953 | 7_1:+59305954 | Msa1027070:three_prime_UTR |
| TCGTGCCTTTACAGCTTTGT+CGG | 0.375793 | 7_1:-59305032 | None:intergenic |
| CTGTTGTTACATTTAACTTC+CGG | 0.377986 | 7_1:+59304235 | Msa1027070:CDS |
| AACAGTGAGACTGTTAAGTT+TGG | 0.381769 | 7_1:+59304665 | Msa1027070:intron |
| CCAATTGCCATTGGAGGTCC+TGG | 0.386522 | 7_1:+59305622 | Msa1027070:CDS |
| TTAATGAAGGCTTTGGAGAT+TGG | 0.387440 | 7_1:+59304797 | Msa1027070:CDS |
| GGAGAAACAAGGTAATGTTT+TGG | 0.390958 | 7_1:-59304381 | None:intergenic |
| TTCTGGAACGGGAACCGGTC+TGG | 0.391463 | 7_1:+59304701 | Msa1027070:CDS |
| TGTTGTTACATTTAACTTCC+GGG | 0.395703 | 7_1:+59304236 | Msa1027070:CDS |
| AGATACTGGTCATTGGCCTT+TGG | 0.400766 | 7_1:-59304150 | None:intergenic |
| GCAACTGTGATGAATCTTCA+TGG | 0.403570 | 7_1:+59305706 | Msa1027070:CDS |
| TTACTAATATACCTGTTTAA+GGG | 0.403910 | 7_1:-59301705 | None:intergenic |
| GCAACCATTAATGAAGGCTT+TGG | 0.407578 | 7_1:+59304790 | Msa1027070:CDS |
| AGCAACAGTTGTGGCTTGTA+AGG | 0.410007 | 7_1:+59305006 | Msa1027070:CDS |
| AGATGGTTTCAATTACATAA+AGG | 0.411347 | 7_1:+59302967 | Msa1027070:CDS |
| CACCTGCACTTGATCAAGTC+TGG | 0.413686 | 7_1:-59303050 | None:intergenic |
| TACCATGGATTCCCTTAAAC+AGG | 0.414228 | 7_1:+59301694 | Msa1027070:CDS |
| AGAGCATTTGTGAACTTATG+AGG | 0.415990 | 7_1:-59304099 | None:intergenic |
| CTAACCAATCTCCAATGTTC+AGG | 0.418987 | 7_1:-59301812 | None:intergenic |
| ACAGCAACTGTCTTTCCCTT+TGG | 0.421353 | 7_1:-59301602 | None:intergenic |
| CCATGGTAATGCAGAAGATA+TGG | 0.423304 | 7_1:+59305374 | Msa1027070:CDS |
| GATGAATCTTCATGGATTTG+AGG | 0.427831 | 7_1:+59305714 | Msa1027070:CDS |
| TAACAAAAGGAGGCAGATAC+TGG | 0.428820 | 7_1:-59304164 | None:intergenic |
| GGATGGGATGCTCAAGTTCT+TGG | 0.428911 | 7_1:+59304069 | Msa1027070:CDS |
| GAGTATGAGAAGTAAGAATC+TGG | 0.431285 | 7_1:-59305443 | None:intergenic |
| TCTTAGCGGTAAATTTGATC+AGG | 0.431308 | 7_1:+59304841 | Msa1027070:CDS |
| TGCCCCACCATGTCACCATT+TGG | 0.436909 | 7_1:-59304968 | None:intergenic |
| AAATCAACTTGCAGAATGAC+TGG | 0.438202 | 7_1:+59304031 | Msa1027070:intron |
| CCAGAAGTCCTGTCGATCTC+TGG | 0.438388 | 7_1:-59304405 | None:intergenic |
| ACAGCATCTCCGTCGACTAT+AGG | 0.445604 | 7_1:-59304216 | None:intergenic |
| GGAGGTCCTGGATTGGCTCC+TGG | 0.446044 | 7_1:+59305634 | Msa1027070:CDS |
| AGTTATGTTTGGCAACTGGC+TGG | 0.448984 | 7_1:+59306051 | Msa1027070:three_prime_UTR |
| TGCTCCTGAACATTGGAGAT+TGG | 0.449270 | 7_1:+59301808 | Msa1027070:CDS |
| GGGGTGTTGTGAAGCGTGGA+TGG | 0.450716 | 7_1:+59304052 | Msa1027070:CDS |
| TGCCATTGGAGGTCCTGGAT+TGG | 0.455036 | 7_1:+59305627 | Msa1027070:CDS |
| CGCAACGATGTTCCCACCGG+TGG | 0.455928 | 7_1:+59305667 | Msa1027070:CDS |
| GGTCACAACGCCCTTGGTGC+TGG | 0.456554 | 7_1:+59301893 | Msa1027070:CDS |
| CCAGGACCTCCAATGGCAAT+TGG | 0.459761 | 7_1:-59305622 | None:intergenic |
| GATATGGGTAATAGTGAAGT+TGG | 0.460793 | 7_1:+59301872 | Msa1027070:CDS |
| TGGAGATTGGTTAGGGCTCA+TGG | 0.464251 | 7_1:+59301821 | Msa1027070:CDS |
| ACTGGCACATTGCATCTCAT+TGG | 0.465570 | 7_1:+59303001 | Msa1027070:CDS |
| TGAACATTGGAGATTGGTTA+GGG | 0.470075 | 7_1:+59301814 | Msa1027070:CDS |
| GGTGACATGGTGGGGCATAC+AGG | 0.472436 | 7_1:+59304974 | Msa1027070:CDS |
| CAAACACAACACAATTCAAC+AGG | 0.472490 | 7_1:+59301256 | None:intergenic |
| GAATCTGTTATAAACAAAGA+TGG | 0.474550 | 7_1:+59301535 | Msa1027070:intron |
| GTTGAGATTCCAAGTGACTC+TGG | 0.483060 | 7_1:+59304752 | Msa1027070:CDS |
| TTCCCTAAAATCCGTTATGC+TGG | 0.483311 | 7_1:+59304327 | Msa1027070:CDS |
| CTTGCAAAATTGCGTGAGAA+AGG | 0.491835 | 7_1:+59303274 | Msa1027070:CDS |
| ATTGATGCACAGATTGCATC+AGG | 0.498147 | 7_1:+59303298 | Msa1027070:CDS |
| CAATGAGCAACCATTAATGA+AGG | 0.499084 | 7_1:+59304784 | Msa1027070:CDS |
| GGCTTTGGAGATTGGCGAGA+AGG | 0.502528 | 7_1:+59304805 | Msa1027070:CDS |
| CTCTCATCAACAATAACAAA+AGG | 0.513371 | 7_1:-59304177 | None:intergenic |
| CTCATTGGACTGCTGAGTGA+TGG | 0.513603 | 7_1:+59303016 | Msa1027070:CDS |
| GTTAAGGTGCCAATTGCCAT+TGG | 0.515652 | 7_1:+59305613 | Msa1027070:intron |
| TTTGGTAGCTTAGGGTGATC+CGG | 0.517134 | 7_1:-59301584 | None:intergenic |
| TGGAGATTGGCGAGAAGGCA+AGG | 0.517986 | 7_1:+59304810 | Msa1027070:CDS |
| TTTCTCCACCAGAGATCGAC+AGG | 0.519139 | 7_1:+59304397 | Msa1027070:CDS |
| AGTATTTGATTGACAATGCT+AGG | 0.519238 | 7_1:-59305977 | None:intergenic |
| GTCTCTCTCACAACATCGTT+AGG | 0.523353 | 7_1:+59301335 | Msa1027070:five_prime_UTR |
| TACCAAATGGTGACATGGTG+GGG | 0.524171 | 7_1:+59304966 | Msa1027070:CDS |
| TTTGTTATTGTTGATGAGAG+TGG | 0.528332 | 7_1:+59304180 | Msa1027070:CDS |
| TGTCACAATGGATCGTTATG+AGG | 0.530211 | 7_1:+59303336 | Msa1027070:CDS |
| GGCTGGAAAACCTTTGCTAA+AGG | 0.530362 | 7_1:+59305410 | Msa1027070:CDS |
| AGGAGGCAGATACTGGTCAT+TGG | 0.531953 | 7_1:-59304157 | None:intergenic |
| GGAAAACCTTTGCTAAAGGA+TGG | 0.537463 | 7_1:+59305414 | Msa1027070:CDS |
| AATGTTATCCCAGAGTCACT+TGG | 0.538076 | 7_1:-59304761 | None:intergenic |
| GCTGGTCGTATATTTGCTCA+AGG | 0.538202 | 7_1:+59301911 | Msa1027070:CDS |
| CTTCCAACTGAGGATGATAT+GGG | 0.540266 | 7_1:+59301857 | Msa1027070:CDS |
| TGAAGCCATCAAGACATTGA+GGG | 0.541403 | 7_1:+59304122 | Msa1027070:CDS |
| ATACGTGTCAACATACCAAA+TGG | 0.544604 | 7_1:+59304953 | Msa1027070:CDS |
| ATGGTCAAGAGGGACAAGGC+TGG | 0.548538 | 7_1:+59305393 | Msa1027070:CDS |
| CTGACACCAGGAGCCAATCC+AGG | 0.549594 | 7_1:-59305640 | None:intergenic |
| CGATCTCTGGTGGAGAAACA+AGG | 0.551237 | 7_1:-59304392 | None:intergenic |
| CTCCAGACTTGATCAAGTGC+AGG | 0.551379 | 7_1:+59303048 | Msa1027070:CDS |
| GAAGTTGGTCACAACGCCCT+TGG | 0.555319 | 7_1:+59301887 | Msa1027070:CDS |
| TTGAAGCCATCAAGACATTG+AGG | 0.561074 | 7_1:+59304121 | Msa1027070:CDS |
| AGCTACGTTGGCTAACCCAC+CGG | 0.561680 | 7_1:-59305683 | None:intergenic |
| AAGGTGCCAATTGCCATTGG+AGG | 0.563279 | 7_1:+59305616 | Msa1027070:intron |
| TAAATTGCTGTATTAGTCTG+CGG | 0.563559 | 7_1:+59305880 | Msa1027070:three_prime_UTR |
| GGAGATTGGCGAGAAGGCAA+GGG | 0.563927 | 7_1:+59304811 | Msa1027070:CDS |
| GCACAGATTGCATCAGGTGG+AGG | 0.564406 | 7_1:+59303304 | Msa1027070:CDS |
| AATCTGTTATAAACAAAGAT+GGG | 0.564502 | 7_1:+59301536 | Msa1027070:exon |
| TACCTGTTTAAGGGAATCCA+TGG | 0.566051 | 7_1:-59301696 | None:intergenic |
| GACATTGAGGGCAGCACCAA+AGG | 0.566064 | 7_1:+59304134 | Msa1027070:CDS |
| GAAGTCCTGTCGATCTCTGG+TGG | 0.566154 | 7_1:-59304402 | None:intergenic |
| CGTCTCCATATTCTTACTGA+TGG | 0.566206 | 7_1:+59303196 | Msa1027070:CDS |
| TTGAGATTCCAAGTGACTCT+GGG | 0.569734 | 7_1:+59304753 | Msa1027070:CDS |
| TCGTATGACTATGCTTGCTA+AGG | 0.572285 | 7_1:+59304263 | Msa1027070:CDS |
| AATCAACTTGCAGAATGACT+GGG | 0.575871 | 7_1:+59304032 | Msa1027070:intron |
| TCTCATCAAAATATCCAGAC+CGG | 0.576005 | 7_1:-59304715 | None:intergenic |
| ATACCAAATGGTGACATGGT+GGG | 0.577688 | 7_1:+59304965 | Msa1027070:CDS |
| CATCACAGTTGCAGCTACGT+TGG | 0.580102 | 7_1:-59305695 | None:intergenic |
| AGCCAATCCAGGACCTCCAA+TGG | 0.580715 | 7_1:-59305629 | None:intergenic |
| GGGTGTTGTGAAGCGTGGAT+GGG | 0.582040 | 7_1:+59304053 | Msa1027070:CDS |
| AGGGCTCATGGTAAAGCAGT+AGG | 0.583787 | 7_1:+59301833 | Msa1027070:CDS |
| CTTAAAGGAGCTAGCGAGCG+AGG | 0.588541 | 7_1:+59303160 | Msa1027070:CDS |
| GCATAGTCATACGATCTGCC+CGG | 0.589819 | 7_1:-59304254 | None:intergenic |
| CAACGCTGAAACACCTACCA+TGG | 0.590025 | 7_1:+59301679 | Msa1027070:CDS |
| GCAAGGGATGCAATTCTTAG+CGG | 0.592103 | 7_1:+59304827 | Msa1027070:CDS |
| TGCAGAAGATATGGTCAAGA+GGG | 0.593650 | 7_1:+59305383 | Msa1027070:CDS |
| TTACCCATATCATCCTCAGT+TGG | 0.593902 | 7_1:-59301860 | None:intergenic |
| GATCACCCTAAGCTACCAAA+GGG | 0.594226 | 7_1:+59301587 | Msa1027070:CDS |
| ATTGGACTGCTGAGTGATGG+AGG | 0.601224 | 7_1:+59303019 | Msa1027070:CDS |
| GCAACGATGTTCCCACCGGT+GGG | 0.602898 | 7_1:+59305668 | Msa1027070:CDS |
| CATACCAAATGGTGACATGG+TGG | 0.606564 | 7_1:+59304964 | Msa1027070:CDS |
| TTCCGCAACGATGTTCCCAC+CGG | 0.606749 | 7_1:+59305664 | Msa1027070:CDS |
| TACGTTGGCTAACCCACCGG+TGG | 0.608418 | 7_1:-59305680 | None:intergenic |
| ATTCGAGCATACCAGCATAA+CGG | 0.610168 | 7_1:-59304338 | None:intergenic |
| AGAGTTGTCTCATAGTCACT+TGG | 0.611671 | 7_1:-59305739 | None:intergenic |
| CAACATACCAAATGGTGACA+TGG | 0.612215 | 7_1:+59304961 | Msa1027070:CDS |
| GACTGGGGTGTTGTGAAGCG+TGG | 0.613541 | 7_1:+59304048 | Msa1027070:CDS |
| TGTTTAAGGGAATCCATGGT+AGG | 0.617690 | 7_1:-59301692 | None:intergenic |
| TGTAGGGTGCTCCTGAACAT+TGG | 0.618822 | 7_1:+59301801 | Msa1027070:intron |
| GCTGGTATGCTCGAATATGA+TGG | 0.622683 | 7_1:+59304345 | Msa1027070:CDS |
| TGACATTGAAGCAACAGTTG+TGG | 0.622685 | 7_1:+59304997 | Msa1027070:CDS |
| CAAAAGTCCACAAACAAGTG+TGG | 0.628067 | 7_1:-59305853 | None:intergenic |
| TCTTGACGCAATTGAGCAAG+TGG | 0.628618 | 7_1:+59305326 | Msa1027070:CDS |
| AAATATACGACCAGCACCAA+GGG | 0.629567 | 7_1:-59301903 | None:intergenic |
| CAAATATACGACCAGCACCA+AGG | 0.631880 | 7_1:-59301904 | None:intergenic |
| GACGCAATTGAGCAAGTGGG+TGG | 0.633330 | 7_1:+59305330 | Msa1027070:CDS |
| CCATATCTTCTGCATTACCA+TGG | 0.633988 | 7_1:-59305374 | None:intergenic |
| ATGCAGAAGATATGGTCAAG+AGG | 0.636234 | 7_1:+59305382 | Msa1027070:CDS |
| TCTGTTGGTCCTATAGTCGA+CGG | 0.637014 | 7_1:+59304207 | Msa1027070:CDS |
| TCATCAACAATAACAAAAGG+AGG | 0.644114 | 7_1:-59304174 | None:intergenic |
| GATGAGAGTGGAAAATCTGT+TGG | 0.645227 | 7_1:+59304192 | Msa1027070:CDS |
| CTTGACGCAATTGAGCAAGT+GGG | 0.650945 | 7_1:+59305327 | Msa1027070:CDS |
| GGATCACCCTAAGCTACCAA+AGG | 0.651509 | 7_1:+59301586 | Msa1027070:CDS |
| CTGGTCGTATATTTGCTCAA+GGG | 0.654046 | 7_1:+59301912 | Msa1027070:CDS |
| TCGTTGCGGAATCTGACACC+AGG | 0.655685 | 7_1:-59305652 | None:intergenic |
| CACCGGTGGGAACATCGTTG+CGG | 0.658913 | 7_1:-59305666 | None:intergenic |
| AGATATGGTCAAGAGGGACA+AGG | 0.667213 | 7_1:+59305389 | Msa1027070:CDS |
| AAGTCCACAAACAAGTGTGG+AGG | 0.667381 | 7_1:-59305850 | None:intergenic |
| ATCAACTTGCAGAATGACTG+GGG | 0.675981 | 7_1:+59304033 | Msa1027070:intron |
| CATCAGTAAGAATATGGAGA+CGG | 0.682014 | 7_1:-59303195 | None:intergenic |
| TATGTTGTGACTGCTGACCA+TGG | 0.691967 | 7_1:+59305357 | Msa1027070:CDS |
| GGAAACGTACTCTATCAAAG+TGG | 0.700257 | 7_1:-59304308 | None:intergenic |
| GATGCACAGATTGCATCAGG+TGG | 0.709624 | 7_1:+59303301 | Msa1027070:CDS |
| AGCAGTAGGACTTCCAACTG+AGG | 0.710284 | 7_1:+59301847 | Msa1027070:CDS |
| AGGTCGCATGAATGTCACAA+TGG | 0.722117 | 7_1:+59303324 | Msa1027070:CDS |
| CTGTTACACAAATGTCACAG+AGG | 0.742719 | 7_1:-59301304 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATTAAATTAAACTAAAC+AGG | - | chr7_1:59301440-59301459 | None:intergenic | 10.0% |
| !! | TAATTATATACTAATCTAAA+GGG | + | chr7_1:59302026-59302045 | Msa1027070:intron | 10.0% |
| !! | CAAAAAAAAAACAAAAAAAT+AGG | - | chr7_1:59302534-59302553 | None:intergenic | 10.0% |
| !! | GTAATTATATACTAATCTAA+AGG | + | chr7_1:59302025-59302044 | Msa1027070:intron | 15.0% |
| !! | TGTTAACATATTAAATGAAA+TGG | - | chr7_1:59303382-59303401 | None:intergenic | 15.0% |
| !! | AAAAAAGAAAGAATAGTTAA+CGG | + | chr7_1:59303467-59303486 | Msa1027070:intron | 15.0% |
| !! | TCAATAAACAGAATAAAATT+GGG | - | chr7_1:59303675-59303694 | None:intergenic | 15.0% |
| !! | TTCAATAAACAGAATAAAAT+TGG | - | chr7_1:59303676-59303695 | None:intergenic | 15.0% |
| !! | TTCAATAAACAGAATAAAAT+TGG | - | chr7_1:59303676-59303695 | None:intergenic | 15.0% |
| !!! | TACAAACTTAAAATACTTTT+TGG | + | chr7_1:59305999-59306018 | Msa1027070:three_prime_UTR | 15.0% |
| !! | TTAAACTAAACAGGTTAATT+TGG | - | chr7_1:59301431-59301450 | None:intergenic | 20.0% |
| !! | AATCTGTTATAAACAAAGAT+GGG | + | chr7_1:59301536-59301555 | Msa1027070:exon | 20.0% |
| !! | TTACTAATATACCTGTTTAA+GGG | - | chr7_1:59301708-59301727 | None:intergenic | 20.0% |
| !! | ATTACTAATATACCTGTTTA+AGG | - | chr7_1:59301709-59301728 | None:intergenic | 20.0% |
| !!! | GGTATATTAGTAATCTTTTT+TGG | + | chr7_1:59301715-59301734 | Msa1027070:intron | 20.0% |
| !!! | AATCTTTTTTGGATTGAATA+TGG | + | chr7_1:59301726-59301745 | Msa1027070:intron | 20.0% |
| !!! | AAATTGTTTTGTTATGTTGT+AGG | + | chr7_1:59301784-59301803 | Msa1027070:intron | 20.0% |
| !!! | AATTGTTTTGTTATGTTGTA+GGG | + | chr7_1:59301785-59301804 | Msa1027070:intron | 20.0% |
| !! | AAAACACTTTCAAAAAGAAA+AGG | - | chr7_1:59302370-59302389 | None:intergenic | 20.0% |
| !! | ATGTTTGAAAGAAACAAAAT+TGG | - | chr7_1:59302497-59302516 | None:intergenic | 20.0% |
| !!! | TTTTGTTTCTTTCAAACATT+TGG | + | chr7_1:59302498-59302517 | Msa1027070:intron | 20.0% |
| !!! | TTTGTTTTTTTTTTGTGTCA+TGG | + | chr7_1:59302539-59302558 | Msa1027070:intron | 20.0% |
| !! | TAACATATTAAATGAAATGG+TGG | - | chr7_1:59303379-59303398 | None:intergenic | 20.0% |
| !! | ATTAAACGTAGTTTACTATA+TGG | + | chr7_1:59303512-59303531 | Msa1027070:intron | 20.0% |
| !! | ATCAGTAAAAAAAAGAAACT+AGG | - | chr7_1:59303623-59303642 | None:intergenic | 20.0% |
| !!! | TTTTTGTTGTATTACCATAT+TGG | + | chr7_1:59303767-59303786 | Msa1027070:intron | 20.0% |
| !! | TCAAGTCAACAAAATTTATT+TGG | - | chr7_1:59303956-59303975 | None:intergenic | 20.0% |
| !! | AATAGTAGTTTCATATAGAA+TGG | - | chr7_1:59304553-59304572 | None:intergenic | 20.0% |
| !!! | ACTTAATTTTTGAAATTTGC+TGG | + | chr7_1:59305055-59305074 | Msa1027070:intron | 20.0% |
| !!! | CTTAATTTTTGAAATTTGCT+GGG | + | chr7_1:59305056-59305075 | Msa1027070:intron | 20.0% |
| !! | AAATACACAGTATTATTACA+AGG | - | chr7_1:59305285-59305304 | None:intergenic | 20.0% |
| !!! | TTTTGTACTTTTGTTTGTTA+AGG | + | chr7_1:59305597-59305616 | Msa1027070:intron | 20.0% |
| !! | AAAAGACAACAAAACAAAAA+AGG | - | chr7_1:59306082-59306101 | None:intergenic | 20.0% |
| !!! | ATCAACAGTTTCATTATTTT+TGG | - | chr7_1:59306193-59306212 | None:intergenic | 20.0% |
| ! | CATAGATATTATCAATGATG+AGG | + | chr7_1:59301478-59301497 | Msa1027070:intron | 25.0% |
| ! | GAATCTGTTATAAACAAAGA+TGG | + | chr7_1:59301535-59301554 | Msa1027070:intron | 25.0% |
| ! | GCTTATAATTTCGATCTATT+TGG | + | chr7_1:59301947-59301966 | Msa1027070:intron | 25.0% |
| ! | TAATTTCGATCTATTTGGTT+TGG | + | chr7_1:59301952-59301971 | Msa1027070:intron | 25.0% |
| ! | AATAAGTTGTTTATCCAAAC+AGG | - | chr7_1:59302052-59302071 | None:intergenic | 25.0% |
| !!! | TAAGTTTTGTGAGACTATTT+GGG | - | chr7_1:59302193-59302212 | None:intergenic | 25.0% |
| !!! | ATAAGTTTTGTGAGACTATT+TGG | - | chr7_1:59302194-59302213 | None:intergenic | 25.0% |
| !! | TAATTTTTGCCTGTTTAGAT+TGG | - | chr7_1:59302240-59302259 | None:intergenic | 25.0% |
| ! | TTATTTATTCACCTATGTCT+TGG | + | chr7_1:59302395-59302414 | Msa1027070:intron | 25.0% |
| ! | CTTAGAGTAATTCAAGAAAA+AGG | - | chr7_1:59302609-59302628 | None:intergenic | 25.0% |
| ! | GTCAATATGCATATACAATA+CGG | - | chr7_1:59302834-59302853 | None:intergenic | 25.0% |
| ! | AGATGGTTTCAATTACATAA+AGG | + | chr7_1:59302967-59302986 | Msa1027070:CDS | 25.0% |
| !!! | ATAAAGGAAAGTTTTGAAAC+TGG | + | chr7_1:59302983-59303002 | Msa1027070:CDS | 25.0% |
| ! | ATAGTTAGTTAGAACAAAGA+AGG | - | chr7_1:59303124-59303143 | None:intergenic | 25.0% |
| !! | TTTTGCAAGATCATTTTCAA+GGG | - | chr7_1:59303263-59303282 | None:intergenic | 25.0% |
| !! | ATTTTGCAAGATCATTTTCA+AGG | - | chr7_1:59303264-59303283 | None:intergenic | 25.0% |
| !! | TTTTCTGTTATTATGCATTC+TGG | + | chr7_1:59303424-59303443 | Msa1027070:intron | 25.0% |
| ! | AAAACAGTCATGATTTCTTA+GGG | - | chr7_1:59303831-59303850 | None:intergenic | 25.0% |
| ! | TAAAACAGTCATGATTTCTT+AGG | - | chr7_1:59303832-59303851 | None:intergenic | 25.0% |
| !! | GTTATTAGATTTCCTTTTTG+TGG | + | chr7_1:59303897-59303916 | Msa1027070:intron | 25.0% |
| ! | TACAAAACAAAACCACAAAA+AGG | - | chr7_1:59303912-59303931 | None:intergenic | 25.0% |
| ! | GGTGAATATTTAGTCAAAAA+TGG | + | chr7_1:59304426-59304445 | Msa1027070:CDS | 25.0% |
| ! | TTATCACCTATTTAATCTGT+TGG | + | chr7_1:59304475-59304494 | Msa1027070:intron | 25.0% |
| ! | AGAAAACCAACAGATTAAAT+AGG | - | chr7_1:59304484-59304503 | None:intergenic | 25.0% |
| !!! | AAATGTTTGCTTTTGAATGA+TGG | + | chr7_1:59304612-59304631 | Msa1027070:intron | 25.0% |
| ! | AATTTGATCAGGTAAGTAAA+TGG | + | chr7_1:59304852-59304871 | Msa1027070:intron | 25.0% |
| !! | TATTTAAATACAGCACTGAA+AGG | - | chr7_1:59305205-59305224 | None:intergenic | 25.0% |
| ! | AATTAGGTAGTAAAACTTAC+TGG | - | chr7_1:59305474-59305493 | None:intergenic | 25.0% |
| ! | GTCGGAACTAATTATAAATT+AGG | - | chr7_1:59305490-59305509 | None:intergenic | 25.0% |
| !! | TCTTTTACTTCAGTTATGTT+TGG | + | chr7_1:59306040-59306059 | Msa1027070:three_prime_UTR | 25.0% |
| ! | AATTCAACAGGTTAAGGTTT+TGG | + | chr7_1:59301268-59301287 | Msa1027070:five_prime_UTR | 30.0% |
| !! | TGAGGTTTGTTGTTGATTTA+TGG | + | chr7_1:59301496-59301515 | Msa1027070:intron | 30.0% |
| ! | TGATTTTTCATGGAAACTAC+CGG | + | chr7_1:59301565-59301584 | Msa1027070:CDS | 30.0% |
| !!! | TGTTATTGTTTTGGATGGTT+GGG | + | chr7_1:59301622-59301641 | Msa1027070:CDS | 30.0% |
| !!! | GTTAGATCTATTGCTGTTTT+AGG | + | chr7_1:59301748-59301767 | Msa1027070:intron | 30.0% |
| TATTGCAAGCAAAATACACA+CGG | - | chr7_1:59301980-59301999 | None:intergenic | 30.0% | |
| ACAAGAGCTTATCATGATAA+TGG | + | chr7_1:59302085-59302104 | Msa1027070:intron | 30.0% | |
| TCAAATAAGCCAATCTAAAC+AGG | + | chr7_1:59302228-59302247 | Msa1027070:intron | 30.0% | |
| AAGTTAATTGCTCATGTTCA+CGG | + | chr7_1:59302295-59302314 | Msa1027070:intron | 30.0% | |
| !!! | TTCACGGCTAATTTAGTTTT+AGG | + | chr7_1:59302311-59302330 | Msa1027070:intron | 30.0% |
| TGCTTCTTGATTTACAATAC+TGG | + | chr7_1:59302461-59302480 | Msa1027070:intron | 30.0% | |
| AGAACAAGACATAGCAATAA+CGG | - | chr7_1:59302577-59302596 | None:intergenic | 30.0% | |
| GAGTAATTCAAGAAAAAGGA+TGG | - | chr7_1:59302605-59302624 | None:intergenic | 30.0% | |
| !!! | CTCATGCATAGTTTAGTTTT+AGG | + | chr7_1:59302657-59302676 | Msa1027070:intron | 30.0% |
| ! | ATGAATAGTCAACTTGTTTG+TGG | + | chr7_1:59302686-59302705 | Msa1027070:intron | 30.0% |
| TTCTTTCCAAACATTAGGAT+TGG | + | chr7_1:59302767-59302786 | Msa1027070:intron | 30.0% | |
| TCTTTCCAAACATTAGGATT+GGG | + | chr7_1:59302768-59302787 | Msa1027070:intron | 30.0% | |
| AAGAATTAGCGAAACATTTC+AGG | - | chr7_1:59302811-59302830 | None:intergenic | 30.0% | |
| ! | TTTGTACAGTTGTTGCTTAA+AGG | + | chr7_1:59303145-59303164 | Msa1027070:intron | 30.0% |
| TTACTATATGGTGTCTGATT+AGG | + | chr7_1:59303524-59303543 | Msa1027070:intron | 30.0% | |
| TAACCGAAGGATTCAAATTA+TGG | + | chr7_1:59303850-59303869 | Msa1027070:intron | 30.0% | |
| TCACCATAATTTGAATCCTT+CGG | - | chr7_1:59303856-59303875 | None:intergenic | 30.0% | |
| TCATCAACAATAACAAAAGG+AGG | - | chr7_1:59304177-59304196 | None:intergenic | 30.0% | |
| CTCTCATCAACAATAACAAA+AGG | - | chr7_1:59304180-59304199 | None:intergenic | 30.0% | |
| !! | TTTGTTATTGTTGATGAGAG+TGG | + | chr7_1:59304180-59304199 | Msa1027070:CDS | 30.0% |
| ! | CTGTTGTTACATTTAACTTC+CGG | + | chr7_1:59304235-59304254 | Msa1027070:CDS | 30.0% |
| ! | TGTTGTTACATTTAACTTCC+GGG | + | chr7_1:59304236-59304255 | Msa1027070:CDS | 30.0% |
| ! | TTTGACTGTAGTTTTTACGT+TGG | + | chr7_1:59304572-59304591 | Msa1027070:intron | 30.0% |
| ! | TTGACTGTAGTTTTTACGTT+GGG | + | chr7_1:59304573-59304592 | Msa1027070:intron | 30.0% |
| !!! | TGGATATTTTGATGAGAAAC+TGG | + | chr7_1:59304721-59304740 | Msa1027070:CDS | 30.0% |
| !!! | ATATTTTGATGAGAAACTGG+AGG | + | chr7_1:59304724-59304743 | Msa1027070:CDS | 30.0% |
| !! | GGTAAGTAAATGGATTATCT+CGG | + | chr7_1:59304862-59304881 | Msa1027070:intron | 30.0% |
| !! | GTAAGTAAATGGATTATCTC+GGG | + | chr7_1:59304863-59304882 | Msa1027070:intron | 30.0% |
| ! | TAAATTGCTGTATTAGTCTG+CGG | + | chr7_1:59305880-59305899 | Msa1027070:three_prime_UTR | 30.0% |
| AGTTGTGCTGAATAATAATC+AGG | + | chr7_1:59305954-59305973 | Msa1027070:three_prime_UTR | 30.0% | |
| AGTATTTGATTGACAATGCT+AGG | - | chr7_1:59305980-59305999 | None:intergenic | 30.0% | |
| ! | GTTGTCTTTTCATTTGTATG+AGG | + | chr7_1:59306092-59306111 | Msa1027070:three_prime_UTR | 30.0% |
| CAACACAATTCAACAGGTTA+AGG | + | chr7_1:59301262-59301281 | Msa1027070:five_prime_UTR | 35.0% | |
| !! | GACAGTTGCTGTTATTGTTT+TGG | + | chr7_1:59301613-59301632 | Msa1027070:CDS | 35.0% |
| !!! | GTTGCTGTTATTGTTTTGGA+TGG | + | chr7_1:59301617-59301636 | Msa1027070:CDS | 35.0% |
| !!! | CTGTTATTGTTTTGGATGGT+TGG | + | chr7_1:59301621-59301640 | Msa1027070:CDS | 35.0% |
| !!! | GTTATTGTTTTGGATGGTTG+GGG | + | chr7_1:59301623-59301642 | Msa1027070:CDS | 35.0% |
| ! | TGAACATTGGAGATTGGTTA+GGG | + | chr7_1:59301814-59301833 | Msa1027070:CDS | 35.0% |
| GATATGGGTAATAGTGAAGT+TGG | + | chr7_1:59301872-59301891 | Msa1027070:CDS | 35.0% | |
| CTATTTGGGAGAACTAATGA+GGG | - | chr7_1:59302179-59302198 | None:intergenic | 35.0% | |
| ACTATTTGGGAGAACTAATG+AGG | - | chr7_1:59302180-59302199 | None:intergenic | 35.0% | |
| GCTTATTTGAGCTTATCTAC+TGG | - | chr7_1:59302218-59302237 | None:intergenic | 35.0% | |
| GAAAACTGACATGCATAGTA+AGG | - | chr7_1:59302717-59302736 | None:intergenic | 35.0% | |
| ! | TATGCATGTCAGTTTTCCTA+AGG | + | chr7_1:59302720-59302739 | Msa1027070:intron | 35.0% |
| GGTGATTCTTTCCAAACATT+AGG | + | chr7_1:59302762-59302781 | Msa1027070:intron | 35.0% | |
| ! | GAAACTGGAAAGATTTTCGA+AGG | + | chr7_1:59302944-59302963 | Msa1027070:CDS | 35.0% |
| CATCAGTAAGAATATGGAGA+CGG | - | chr7_1:59303198-59303217 | None:intergenic | 35.0% | |
| TGGGCAGTGTATAATACTAA+TGG | - | chr7_1:59303656-59303675 | None:intergenic | 35.0% | |
| !! | TTGCCATTAGTCTTATACAC+TGG | + | chr7_1:59303711-59303730 | Msa1027070:intron | 35.0% |
| ! | GTTGTATTACCATATTGGCT+CGG | + | chr7_1:59303772-59303791 | Msa1027070:intron | 35.0% |
| !!! | ATCATGACTGTTTTAACCGA+AGG | + | chr7_1:59303837-59303856 | Msa1027070:intron | 35.0% |
| AAATCAACTTGCAGAATGAC+TGG | + | chr7_1:59304031-59304050 | Msa1027070:intron | 35.0% | |
| AATCAACTTGCAGAATGACT+GGG | + | chr7_1:59304032-59304051 | Msa1027070:intron | 35.0% | |
| ! | AGAGCATTTGTGAACTTATG+AGG | - | chr7_1:59304102-59304121 | None:intergenic | 35.0% |
| !!! | TACCAGCATAACGGATTTTA+GGG | - | chr7_1:59304332-59304351 | None:intergenic | 35.0% |
| !!! | ATACCAGCATAACGGATTTT+AGG | - | chr7_1:59304333-59304352 | None:intergenic | 35.0% |
| ! | GGAGAAACAAGGTAATGTTT+TGG | - | chr7_1:59304384-59304403 | None:intergenic | 35.0% |
| AACAGTGAGACTGTTAAGTT+TGG | + | chr7_1:59304665-59304684 | Msa1027070:intron | 35.0% | |
| ! | TTGGTCATGTCACATTTTTC+TGG | + | chr7_1:59304684-59304703 | Msa1027070:CDS | 35.0% |
| !! | CATGTCACATTTTTCTGGAA+CGG | + | chr7_1:59304689-59304708 | Msa1027070:CDS | 35.0% |
| !!! | ATGTCACATTTTTCTGGAAC+GGG | + | chr7_1:59304690-59304709 | Msa1027070:CDS | 35.0% |
| TCTCATCAAAATATCCAGAC+CGG | - | chr7_1:59304718-59304737 | None:intergenic | 35.0% | |
| CAATGAGCAACCATTAATGA+AGG | + | chr7_1:59304784-59304803 | Msa1027070:CDS | 35.0% | |
| ATCTCCAAAGCCTTCATTAA+TGG | - | chr7_1:59304797-59304816 | None:intergenic | 35.0% | |
| !! | TTAATGAAGGCTTTGGAGAT+TGG | + | chr7_1:59304797-59304816 | Msa1027070:CDS | 35.0% |
| TCTTAGCGGTAAATTTGATC+AGG | + | chr7_1:59304841-59304860 | Msa1027070:CDS | 35.0% | |
| ATACGTGTCAACATACCAAA+TGG | + | chr7_1:59304953-59304972 | Msa1027070:CDS | 35.0% | |
| AGGCAATAACACATACTGAA+AGG | - | chr7_1:59305185-59305204 | None:intergenic | 35.0% | |
| TGTTATTGCCCATTAAGTGA+AGG | + | chr7_1:59305246-59305265 | Msa1027070:intron | 35.0% | |
| ! | CTGTTTAGCCTTCACTTAAT+GGG | - | chr7_1:59305257-59305276 | None:intergenic | 35.0% |
| ! | ACTTTTCCATCCTTTAGCAA+AGG | - | chr7_1:59305423-59305442 | None:intergenic | 35.0% |
| GAGTATGAGAAGTAAGAATC+TGG | - | chr7_1:59305446-59305465 | None:intergenic | 35.0% | |
| CTTAACATATACTACATGCG+TGG | + | chr7_1:59305534-59305553 | Msa1027070:intron | 35.0% | |
| GATGAATCTTCATGGATTTG+AGG | + | chr7_1:59305714-59305733 | Msa1027070:CDS | 35.0% | |
| !! | GTTAAGGTTTTGGTCGTGTT+AGG | + | chr7_1:59301278-59301297 | Msa1027070:five_prime_UTR | 40.0% |
| CTGTTACACAAATGTCACAG+AGG | - | chr7_1:59301307-59301326 | None:intergenic | 40.0% | |
| !!! | TGGGTAGCACTGATTTTTCA+TGG | + | chr7_1:59301555-59301574 | Msa1027070:CDS | 40.0% |
| ! | TCTTTCCCTTTGGTAGCTTA+GGG | - | chr7_1:59301595-59301614 | None:intergenic | 40.0% |
| TGTTTAAGGGAATCCATGGT+AGG | - | chr7_1:59301695-59301714 | None:intergenic | 40.0% | |
| TACCATGGATTCCCTTAAAC+AGG | + | chr7_1:59301694-59301713 | Msa1027070:CDS | 40.0% | |
| TACCTGTTTAAGGGAATCCA+TGG | - | chr7_1:59301699-59301718 | None:intergenic | 40.0% | |
| CTAACCAATCTCCAATGTTC+AGG | - | chr7_1:59301815-59301834 | None:intergenic | 40.0% | |
| ! | CTGAACATTGGAGATTGGTT+AGG | + | chr7_1:59301813-59301832 | Msa1027070:CDS | 40.0% |
| ACTTCCAACTGAGGATGATA+TGG | + | chr7_1:59301856-59301875 | Msa1027070:CDS | 40.0% | |
| CTTCCAACTGAGGATGATAT+GGG | + | chr7_1:59301857-59301876 | Msa1027070:CDS | 40.0% | |
| TTACCCATATCATCCTCAGT+TGG | - | chr7_1:59301863-59301882 | None:intergenic | 40.0% | |
| AAATATACGACCAGCACCAA+GGG | - | chr7_1:59301906-59301925 | None:intergenic | 40.0% | |
| CTGGTCGTATATTTGCTCAA+GGG | + | chr7_1:59301912-59301931 | Msa1027070:CDS | 40.0% | |
| ACTAATCTAAAGGGCCTGTT+TGG | + | chr7_1:59302035-59302054 | Msa1027070:intron | 40.0% | |
| CCAAGTACTTACCAAGACAT+AGG | - | chr7_1:59302409-59302428 | None:intergenic | 40.0% | |
| CCTATGTCTTGGTAAGTACT+TGG | + | chr7_1:59302406-59302425 | Msa1027070:intron | 40.0% | |
| CGATGCGTCATAAATGTAAC+CGG | + | chr7_1:59302433-59302452 | Msa1027070:intron | 40.0% | |
| !! | TAAATCAAGAAGCACCACAC+CGG | - | chr7_1:59302455-59302474 | None:intergenic | 40.0% |
| AACTAAACTATGCATGAGCG+AGG | - | chr7_1:59302655-59302674 | None:intergenic | 40.0% | |
| ACATAAGAACGTGAGTCCTT+AGG | - | chr7_1:59302739-59302758 | None:intergenic | 40.0% | |
| AGGACTCACGTTCTTATGTT+TGG | + | chr7_1:59302740-59302759 | Msa1027070:intron | 40.0% | |
| GGACTCACGTTCTTATGTTT+GGG | + | chr7_1:59302741-59302760 | Msa1027070:intron | 40.0% | |
| CAAGACCCAATCCTAATGTT+TGG | - | chr7_1:59302776-59302795 | None:intergenic | 40.0% | |
| TTCCTAGCACATGTGATGAT+TGG | + | chr7_1:59302866-59302885 | Msa1027070:intron | 40.0% | |
| TCCTAGCACATGTGATGATT+GGG | + | chr7_1:59302867-59302886 | Msa1027070:intron | 40.0% | |
| ATGTGATGATTGGGATGTAC+TGG | + | chr7_1:59302876-59302895 | Msa1027070:intron | 40.0% | |
| !! | GTTGACATTGCTCTAGAAAC+TGG | + | chr7_1:59302929-59302948 | Msa1027070:CDS | 40.0% |
| ! | GGAAAGATTTTCGAAGGAGA+TGG | + | chr7_1:59302950-59302969 | Msa1027070:CDS | 40.0% |
| CGTCTCCATATTCTTACTGA+TGG | + | chr7_1:59303196-59303215 | Msa1027070:CDS | 40.0% | |
| CACGACCATCAGTAAGAATA+TGG | - | chr7_1:59303204-59303223 | None:intergenic | 40.0% | |
| ! | TACTGATGGTCGTGATGTTT+TGG | + | chr7_1:59303210-59303229 | Msa1027070:CDS | 40.0% |
| CTTGCAAAATTGCGTGAGAA+AGG | + | chr7_1:59303274-59303293 | Msa1027070:CDS | 40.0% | |
| ATTGATGCACAGATTGCATC+AGG | + | chr7_1:59303298-59303317 | Msa1027070:CDS | 40.0% | |
| TGTCACAATGGATCGTTATG+AGG | + | chr7_1:59303336-59303355 | Msa1027070:CDS | 40.0% | |
| TGGCCAGTGTATAAGACTAA+TGG | - | chr7_1:59303717-59303736 | None:intergenic | 40.0% | |
| ATCAAACTTCCGAGCCAATA+TGG | - | chr7_1:59303784-59303803 | None:intergenic | 40.0% | |
| ! | TGGCTCGGAAGTTTGATAAA+AGG | + | chr7_1:59303787-59303806 | Msa1027070:intron | 40.0% |
| ATCAACTTGCAGAATGACTG+GGG | + | chr7_1:59304033-59304052 | Msa1027070:intron | 40.0% | |
| TTGAAGCCATCAAGACATTG+AGG | + | chr7_1:59304121-59304140 | Msa1027070:CDS | 40.0% | |
| TGAAGCCATCAAGACATTGA+GGG | + | chr7_1:59304122-59304141 | Msa1027070:CDS | 40.0% | |
| TAACAAAAGGAGGCAGATAC+TGG | - | chr7_1:59304167-59304186 | None:intergenic | 40.0% | |
| GATGAGAGTGGAAAATCTGT+TGG | + | chr7_1:59304192-59304211 | Msa1027070:CDS | 40.0% | |
| ! | TCGTATGACTATGCTTGCTA+AGG | + | chr7_1:59304263-59304282 | Msa1027070:CDS | 40.0% |
| GGAAACGTACTCTATCAAAG+TGG | - | chr7_1:59304311-59304330 | None:intergenic | 40.0% | |
| TTCCCTAAAATCCGTTATGC+TGG | + | chr7_1:59304327-59304346 | Msa1027070:CDS | 40.0% | |
| ATTCGAGCATACCAGCATAA+CGG | - | chr7_1:59304341-59304360 | None:intergenic | 40.0% | |
| TTGAGATTCCAAGTGACTCT+GGG | + | chr7_1:59304753-59304772 | Msa1027070:CDS | 40.0% | |
| AATGTTATCCCAGAGTCACT+TGG | - | chr7_1:59304764-59304783 | None:intergenic | 40.0% | |
| GCAACCATTAATGAAGGCTT+TGG | + | chr7_1:59304790-59304809 | Msa1027070:CDS | 40.0% | |
| !! | AGTAAATGGATTATCTCGGG+TGG | + | chr7_1:59304866-59304885 | Msa1027070:intron | 40.0% |
| CAACATACCAAATGGTGACA+TGG | + | chr7_1:59304961-59304980 | Msa1027070:CDS | 40.0% | |
| ATACCAAATGGTGACATGGT+GGG | + | chr7_1:59304965-59304984 | Msa1027070:CDS | 40.0% | |
| TGACATTGAAGCAACAGTTG+TGG | + | chr7_1:59304997-59305016 | Msa1027070:CDS | 40.0% | |
| GGGCAATAACACATACTGAA+AGG | - | chr7_1:59305237-59305256 | None:intergenic | 40.0% | |
| ! | GCTGTTTAGCCTTCACTTAA+TGG | - | chr7_1:59305258-59305277 | None:intergenic | 40.0% |
| CCATATCTTCTGCATTACCA+TGG | - | chr7_1:59305377-59305396 | None:intergenic | 40.0% | |
| ! | CCATGGTAATGCAGAAGATA+TGG | + | chr7_1:59305374-59305393 | Msa1027070:CDS | 40.0% |
| ATGCAGAAGATATGGTCAAG+AGG | + | chr7_1:59305382-59305401 | Msa1027070:CDS | 40.0% | |
| TGCAGAAGATATGGTCAAGA+GGG | + | chr7_1:59305383-59305402 | Msa1027070:CDS | 40.0% | |
| GGAAAACCTTTGCTAAAGGA+TGG | + | chr7_1:59305414-59305433 | Msa1027070:CDS | 40.0% | |
| TTCCGACTATGCATTCAGTT+CGG | + | chr7_1:59305503-59305522 | Msa1027070:intron | 40.0% | |
| GCAACTGTGATGAATCTTCA+TGG | + | chr7_1:59305706-59305725 | Msa1027070:CDS | 40.0% | |
| AGAGTTGTCTCATAGTCACT+TGG | - | chr7_1:59305742-59305761 | None:intergenic | 40.0% | |
| CAAAAGTCCACAAACAAGTG+TGG | - | chr7_1:59305856-59305875 | None:intergenic | 40.0% | |
| CTTCAGTTATGTTTGGCAAC+TGG | + | chr7_1:59306047-59306066 | Msa1027070:three_prime_UTR | 40.0% | |
| GTCTCTCTCACAACATCGTT+AGG | + | chr7_1:59301335-59301354 | Msa1027070:five_prime_UTR | 45.0% | |
| ! | TTTGGTAGCTTAGGGTGATC+CGG | - | chr7_1:59301587-59301606 | None:intergenic | 45.0% |
| GATCACCCTAAGCTACCAAA+GGG | + | chr7_1:59301587-59301606 | Msa1027070:CDS | 45.0% | |
| ! | GTCTTTCCCTTTGGTAGCTT+AGG | - | chr7_1:59301596-59301615 | None:intergenic | 45.0% |
| ACAGCAACTGTCTTTCCCTT+TGG | - | chr7_1:59301605-59301624 | None:intergenic | 45.0% | |
| TGCTCCTGAACATTGGAGAT+TGG | + | chr7_1:59301808-59301827 | Msa1027070:CDS | 45.0% | |
| CAAATATACGACCAGCACCA+AGG | - | chr7_1:59301907-59301926 | None:intergenic | 45.0% | |
| GCTGGTCGTATATTTGCTCA+AGG | + | chr7_1:59301911-59301930 | Msa1027070:CDS | 45.0% | |
| CGTCATAAATGTAACCGGTG+TGG | + | chr7_1:59302438-59302457 | Msa1027070:intron | 45.0% | |
| TCCCAATCATCACATGTGCT+AGG | - | chr7_1:59302871-59302890 | None:intergenic | 45.0% | |
| ACTGGCACATTGCATCTCAT+TGG | + | chr7_1:59303001-59303020 | Msa1027070:CDS | 45.0% | |
| !! | GATGGTCGTGATGTTTTGGA+TGG | + | chr7_1:59303214-59303233 | Msa1027070:CDS | 45.0% |
| !! | TGTTTTGGATGGCTCAAGTG+TGG | + | chr7_1:59303225-59303244 | Msa1027070:CDS | 45.0% |
| !! | GTTTTGGATGGCTCAAGTGT+GGG | + | chr7_1:59303226-59303245 | Msa1027070:CDS | 45.0% |
| AGGTCGCATGAATGTCACAA+TGG | + | chr7_1:59303324-59303343 | Msa1027070:CDS | 45.0% | |
| CTTAAGTTCAGCTCTGCATC+AGG | + | chr7_1:59303549-59303568 | Msa1027070:intron | 45.0% | |
| !! | AGATACTGGTCATTGGCCTT+TGG | - | chr7_1:59304153-59304172 | None:intergenic | 45.0% |
| TCTGTTGGTCCTATAGTCGA+CGG | + | chr7_1:59304207-59304226 | Msa1027070:CDS | 45.0% | |
| GCTGGTATGCTCGAATATGA+TGG | + | chr7_1:59304345-59304364 | Msa1027070:CDS | 45.0% | |
| !!! | CATTTTTCTGGAACGGGAAC+CGG | + | chr7_1:59304696-59304715 | Msa1027070:CDS | 45.0% |
| GTTGAGATTCCAAGTGACTC+TGG | + | chr7_1:59304752-59304771 | Msa1027070:CDS | 45.0% | |
| GCAAGGGATGCAATTCTTAG+CGG | + | chr7_1:59304827-59304846 | Msa1027070:CDS | 45.0% | |
| CATACCAAATGGTGACATGG+TGG | + | chr7_1:59304964-59304983 | Msa1027070:CDS | 45.0% | |
| TACCAAATGGTGACATGGTG+GGG | + | chr7_1:59304966-59304985 | Msa1027070:CDS | 45.0% | |
| ! | AGCAACAGTTGTGGCTTGTA+AGG | + | chr7_1:59305006-59305025 | Msa1027070:CDS | 45.0% |
| ! | TCGTGCCTTTACAGCTTTGT+CGG | - | chr7_1:59305035-59305054 | None:intergenic | 45.0% |
| TCTTGACGCAATTGAGCAAG+TGG | + | chr7_1:59305326-59305345 | Msa1027070:CDS | 45.0% | |
| CTTGACGCAATTGAGCAAGT+GGG | + | chr7_1:59305327-59305346 | Msa1027070:CDS | 45.0% | |
| TATGTTGTGACTGCTGACCA+TGG | + | chr7_1:59305357-59305376 | Msa1027070:CDS | 45.0% | |
| AGATATGGTCAAGAGGGACA+AGG | + | chr7_1:59305389-59305408 | Msa1027070:CDS | 45.0% | |
| GGCTGGAAAACCTTTGCTAA+AGG | + | chr7_1:59305410-59305429 | Msa1027070:CDS | 45.0% | |
| TCCGACTATGCATTCAGTTC+GGG | + | chr7_1:59305504-59305523 | Msa1027070:intron | 45.0% | |
| ! | GTTAAGGTGCCAATTGCCAT+TGG | + | chr7_1:59305613-59305632 | Msa1027070:intron | 45.0% |
| CATTCCTCCACACTTGTTTG+TGG | + | chr7_1:59305846-59305865 | Msa1027070:three_prime_UTR | 45.0% | |
| AAGTCCACAAACAAGTGTGG+AGG | - | chr7_1:59305853-59305872 | None:intergenic | 45.0% | |
| AGTTATGTTTGGCAACTGGC+TGG | + | chr7_1:59306051-59306070 | Msa1027070:three_prime_UTR | 45.0% | |
| GGATCACCCTAAGCTACCAA+AGG | + | chr7_1:59301586-59301605 | Msa1027070:CDS | 50.0% | |
| CAACGCTGAAACACCTACCA+TGG | + | chr7_1:59301679-59301698 | Msa1027070:CDS | 50.0% | |
| ! | TGTAGGGTGCTCCTGAACAT+TGG | + | chr7_1:59301801-59301820 | Msa1027070:intron | 50.0% |
| ! | TGGAGATTGGTTAGGGCTCA+TGG | + | chr7_1:59301821-59301840 | Msa1027070:CDS | 50.0% |
| AGGGCTCATGGTAAAGCAGT+AGG | + | chr7_1:59301833-59301852 | Msa1027070:CDS | 50.0% | |
| AGCAGTAGGACTTCCAACTG+AGG | + | chr7_1:59301847-59301866 | Msa1027070:CDS | 50.0% | |
| CTCATTGGACTGCTGAGTGA+TGG | + | chr7_1:59303016-59303035 | Msa1027070:CDS | 50.0% | |
| ATTGGACTGCTGAGTGATGG+AGG | + | chr7_1:59303019-59303038 | Msa1027070:CDS | 50.0% | |
| CTCCAGACTTGATCAAGTGC+AGG | + | chr7_1:59303048-59303067 | Msa1027070:CDS | 50.0% | |
| CACCTGCACTTGATCAAGTC+TGG | - | chr7_1:59303053-59303072 | None:intergenic | 50.0% | |
| ! | TGGCTCAAGTGTGGGTTTTG+TGG | + | chr7_1:59303234-59303253 | Msa1027070:CDS | 50.0% |
| GATGCACAGATTGCATCAGG+TGG | + | chr7_1:59303301-59303320 | Msa1027070:CDS | 50.0% | |
| GGATGGGATGCTCAAGTTCT+TGG | + | chr7_1:59304069-59304088 | Msa1027070:CDS | 50.0% | |
| TGCTGCCCTCAATGTCTTGA+TGG | - | chr7_1:59304130-59304149 | None:intergenic | 50.0% | |
| AGGAGGCAGATACTGGTCAT+TGG | - | chr7_1:59304160-59304179 | None:intergenic | 50.0% | |
| ! | ACAGCATCTCCGTCGACTAT+AGG | - | chr7_1:59304219-59304238 | None:intergenic | 50.0% |
| GCATAGTCATACGATCTGCC+CGG | - | chr7_1:59304257-59304276 | None:intergenic | 50.0% | |
| CGATCTCTGGTGGAGAAACA+AGG | - | chr7_1:59304395-59304414 | None:intergenic | 50.0% | |
| TTTCTCCACCAGAGATCGAC+AGG | + | chr7_1:59304397-59304416 | Msa1027070:CDS | 50.0% | |
| ! | GTGTTCGCACTTTTGCTTGC+AGG | + | chr7_1:59304448-59304467 | Msa1027070:CDS | 50.0% |
| CCCCGAACTGAATGCATAGT+CGG | - | chr7_1:59305508-59305527 | None:intergenic | 50.0% | |
| CCGACTATGCATTCAGTTCG+GGG | + | chr7_1:59305505-59305524 | Msa1027070:intron | 50.0% | |
| ! | AAGGTGCCAATTGCCATTGG+AGG | + | chr7_1:59305616-59305635 | Msa1027070:intron | 50.0% |
| CATCACAGTTGCAGCTACGT+TGG | - | chr7_1:59305698-59305717 | None:intergenic | 50.0% | |
| ! | GAAGTTGGTCACAACGCCCT+TGG | + | chr7_1:59301887-59301906 | Msa1027070:CDS | 55.0% |
| CTTAAAGGAGCTAGCGAGCG+AGG | + | chr7_1:59303160-59303179 | Msa1027070:CDS | 55.0% | |
| GCACAGATTGCATCAGGTGG+AGG | + | chr7_1:59303304-59303323 | Msa1027070:CDS | 55.0% | |
| ! | GGGTGTTGTGAAGCGTGGAT+GGG | + | chr7_1:59304053-59304072 | Msa1027070:CDS | 55.0% |
| GACATTGAGGGCAGCACCAA+AGG | + | chr7_1:59304134-59304153 | Msa1027070:CDS | 55.0% | |
| GAAGTCCTGTCGATCTCTGG+TGG | - | chr7_1:59304405-59304424 | None:intergenic | 55.0% | |
| CCAGAAGTCCTGTCGATCTC+TGG | - | chr7_1:59304408-59304427 | None:intergenic | 55.0% | |
| CCAGAGATCGACAGGACTTC+TGG | + | chr7_1:59304405-59304424 | Msa1027070:CDS | 55.0% | |
| !! | GGCTTTGGAGATTGGCGAGA+AGG | + | chr7_1:59304805-59304824 | Msa1027070:CDS | 55.0% |
| TGGAGATTGGCGAGAAGGCA+AGG | + | chr7_1:59304810-59304829 | Msa1027070:CDS | 55.0% | |
| GGAGATTGGCGAGAAGGCAA+GGG | + | chr7_1:59304811-59304830 | Msa1027070:CDS | 55.0% | |
| TGCCCCACCATGTCACCATT+TGG | - | chr7_1:59304971-59304990 | None:intergenic | 55.0% | |
| GGCAGCCGACAAAGCTGTAA+AGG | + | chr7_1:59305027-59305046 | Msa1027070:intron | 55.0% | |
| GACGCAATTGAGCAAGTGGG+TGG | + | chr7_1:59305330-59305349 | Msa1027070:CDS | 55.0% | |
| ATGGTCAAGAGGGACAAGGC+TGG | + | chr7_1:59305393-59305412 | Msa1027070:CDS | 55.0% | |
| CCAGGACCTCCAATGGCAAT+TGG | - | chr7_1:59305625-59305644 | None:intergenic | 55.0% | |
| CCAATTGCCATTGGAGGTCC+TGG | + | chr7_1:59305622-59305641 | Msa1027070:CDS | 55.0% | |
| TGCCATTGGAGGTCCTGGAT+TGG | + | chr7_1:59305627-59305646 | Msa1027070:CDS | 55.0% | |
| AGCCAATCCAGGACCTCCAA+TGG | - | chr7_1:59305632-59305651 | None:intergenic | 55.0% | |
| TCGTTGCGGAATCTGACACC+AGG | - | chr7_1:59305655-59305674 | None:intergenic | 55.0% | |
| TTCCGCAACGATGTTCCCAC+CGG | + | chr7_1:59305664-59305683 | Msa1027070:CDS | 55.0% | |
| ! | AGCTACGTTGGCTAACCCAC+CGG | - | chr7_1:59305686-59305705 | None:intergenic | 55.0% |
| !! | GACTGGGGTGTTGTGAAGCG+TGG | + | chr7_1:59304048-59304067 | Msa1027070:CDS | 60.0% |
| !! | GGGGTGTTGTGAAGCGTGGA+TGG | + | chr7_1:59304052-59304071 | Msa1027070:CDS | 60.0% |
| !! | TTCTGGAACGGGAACCGGTC+TGG | + | chr7_1:59304701-59304720 | Msa1027070:CDS | 60.0% |
| ! | GGTGACATGGTGGGGCATAC+AGG | + | chr7_1:59304974-59304993 | Msa1027070:CDS | 60.0% |
| CTGACACCAGGAGCCAATCC+AGG | - | chr7_1:59305643-59305662 | None:intergenic | 60.0% | |
| CACCGGTGGGAACATCGTTG+CGG | - | chr7_1:59305669-59305688 | None:intergenic | 60.0% | |
| GCAACGATGTTCCCACCGGT+GGG | + | chr7_1:59305668-59305687 | Msa1027070:CDS | 60.0% | |
| ! | ACGTTGGCTAACCCACCGGT+GGG | - | chr7_1:59305682-59305701 | None:intergenic | 60.0% |
| ! | TACGTTGGCTAACCCACCGG+TGG | - | chr7_1:59305683-59305702 | None:intergenic | 60.0% |
| ! | GGTCACAACGCCCTTGGTGC+TGG | + | chr7_1:59301893-59301912 | Msa1027070:CDS | 65.0% |
| !! | GGAGGTCCTGGATTGGCTCC+TGG | + | chr7_1:59305634-59305653 | Msa1027070:CDS | 65.0% |
| CGCAACGATGTTCCCACCGG+TGG | + | chr7_1:59305667-59305686 | Msa1027070:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 59301261 | 59306225 | 59301261 | ID=Msa1027070;Name=Msa1027070 |
| chr7_1 | mRNA | 59301261 | 59306225 | 59301261 | ID=Msa1027070-mRNA-1;Parent=Msa1027070;Name=Msa1027070-mRNA-1;_AED=0.06;_eAED=0.06;_QI=114|0.88|0.9|1|0.88|0.8|10|448|554 |
| chr7_1 | exon | 59301261 | 59301356 | 59301261 | ID=Msa1027070-mRNA-1:exon:12038;Parent=Msa1027070-mRNA-1 |
| chr7_1 | exon | 59301536 | 59301715 | 59301536 | ID=Msa1027070-mRNA-1:exon:12039;Parent=Msa1027070-mRNA-1 |
| chr7_1 | exon | 59301806 | 59301933 | 59301806 | ID=Msa1027070-mRNA-1:exon:12040;Parent=Msa1027070-mRNA-1 |
| chr7_1 | exon | 59302919 | 59303069 | 59302919 | ID=Msa1027070-mRNA-1:exon:12041;Parent=Msa1027070-mRNA-1 |
| chr7_1 | exon | 59303154 | 59303357 | 59303154 | ID=Msa1027070-mRNA-1:exon:12042;Parent=Msa1027070-mRNA-1 |
| chr7_1 | exon | 59304045 | 59304469 | 59304045 | ID=Msa1027070-mRNA-1:exon:12043;Parent=Msa1027070-mRNA-1 |
| chr7_1 | exon | 59304670 | 59304862 | 59304670 | ID=Msa1027070-mRNA-1:exon:12044;Parent=Msa1027070-mRNA-1 |
| chr7_1 | exon | 59304953 | 59305042 | 59304953 | ID=Msa1027070-mRNA-1:exon:12045;Parent=Msa1027070-mRNA-1 |
| chr7_1 | exon | 59305321 | 59305473 | 59305321 | ID=Msa1027070-mRNA-1:exon:12046;Parent=Msa1027070-mRNA-1 |
| chr7_1 | exon | 59305619 | 59306225 | 59305619 | ID=Msa1027070-mRNA-1:exon:12047;Parent=Msa1027070-mRNA-1 |
| chr7_1 | five_prime_UTR | 59301261 | 59301356 | 59301261 | ID=Msa1027070-mRNA-1:five_prime_utr;Parent=Msa1027070-mRNA-1 |
| chr7_1 | five_prime_UTR | 59301536 | 59301553 | 59301536 | ID=Msa1027070-mRNA-1:five_prime_utr;Parent=Msa1027070-mRNA-1 |
| chr7_1 | CDS | 59301554 | 59301715 | 59301554 | ID=Msa1027070-mRNA-1:cds;Parent=Msa1027070-mRNA-1 |
| chr7_1 | CDS | 59301806 | 59301933 | 59301806 | ID=Msa1027070-mRNA-1:cds;Parent=Msa1027070-mRNA-1 |
| chr7_1 | CDS | 59302919 | 59303069 | 59302919 | ID=Msa1027070-mRNA-1:cds;Parent=Msa1027070-mRNA-1 |
| chr7_1 | CDS | 59303154 | 59303357 | 59303154 | ID=Msa1027070-mRNA-1:cds;Parent=Msa1027070-mRNA-1 |
| chr7_1 | CDS | 59304045 | 59304469 | 59304045 | ID=Msa1027070-mRNA-1:cds;Parent=Msa1027070-mRNA-1 |
| chr7_1 | CDS | 59304670 | 59304862 | 59304670 | ID=Msa1027070-mRNA-1:cds;Parent=Msa1027070-mRNA-1 |
| chr7_1 | CDS | 59304953 | 59305042 | 59304953 | ID=Msa1027070-mRNA-1:cds;Parent=Msa1027070-mRNA-1 |
| chr7_1 | CDS | 59305321 | 59305473 | 59305321 | ID=Msa1027070-mRNA-1:cds;Parent=Msa1027070-mRNA-1 |
| chr7_1 | CDS | 59305619 | 59305777 | 59305619 | ID=Msa1027070-mRNA-1:cds;Parent=Msa1027070-mRNA-1 |
| chr7_1 | three_prime_UTR | 59305778 | 59306225 | 59305778 | ID=Msa1027070-mRNA-1:three_prime_utr;Parent=Msa1027070-mRNA-1 |
| Gene Sequence |
| Protein sequence |
