AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1066070

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1066070 MtrunA17_Chr7g0246631 97.429 778 19 1 1 777 1 778 0.0 1570
Msa1066070 MtrunA17_Chr8g0350321 80.377 795 124 13 1 777 30 810 0.0 1268
Msa1066070 MtrunA17_Chr1g0203671 64.753 749 225 11 53 774 54 790 0.0 951
Msa1066070 MtrunA17_Chr4g0024351 53.816 760 311 13 30 777 2 733 0.0 780
Msa1066070 MtrunA17_Chr6g0472471 51.535 782 322 17 27 773 6 765 0.0 773
Msa1066070 MtrunA17_Chr2g0322731 54.211 760 294 15 38 776 42 768 0.0 771
Msa1066070 MtrunA17_Chr6g0481041 48.664 711 329 11 91 777 29 727 0.0 660
Msa1066070 MtrunA17_Chr5g0410711 44.059 749 367 19 55 773 52 778 0.0 603
Msa1066070 MtrunA17_Chr2g0331581 43.541 689 343 10 95 776 143 792 0.0 603
Msa1066070 MtrunA17_Chr5g0394111 40.960 708 332 13 74 773 17 646 4.81e-169 502
Msa1066070 MtrunA17_Chr7g0224451 42.424 495 214 9 85 571 10 441 2.59e-124 379
Msa1066070 MtrunA17_Chr2g0292731 36.864 491 287 9 294 773 70 548 1.20e-97 313
Msa1066070 MtrunA17_Chr2g0292741 36.531 490 285 11 294 773 62 535 1.47e-93 302
Msa1066070 MtrunA17_Chr7g0224481 41.451 386 164 6 85 464 10 339 3.36e-88 281
Msa1066070 MtrunA17_Chr7g0224491 44.860 321 139 10 467 775 1 295 5.53e-76 248
Msa1066070 MtrunA17_Chr2g0292761 30.945 614 340 22 170 773 1 540 6.70e-74 250
Msa1066070 MtrunA17_Chr5g0419821 54.098 122 55 1 91 211 33 154 3.23e-39 143
Msa1066070 MtrunA17_Chr2g0319671 30.961 281 147 5 289 537 19 284 3.59e-36 139
Msa1066070 MtrunA17_Chr2g0319701 36.752 234 137 6 548 777 1 227 2.51e-34 131
Msa1066070 MtrunA17_Chr2g0319681 34.764 233 145 4 548 777 1 229 1.70e-32 126
Msa1066070 MtrunA17_Chr2g0319691 40.945 127 68 2 402 527 1 121 1.87e-26 105
Msa1066070 MtrunA17_Chr1g0205981 33.816 207 100 6 146 338 1 184 9.33e-25 102
Msa1066070 MtrunA17_Chr7g0224461 47.967 123 47 4 663 775 1 116 1.11e-23 96.7
Msa1066070 MtrunA17_Chr2g0304191 35.766 137 76 3 296 426 1 131 7.04e-22 92.4
Msa1066070 MtrunA17_Chr7g0224431 34.756 164 63 2 311 474 1 120 7.21e-19 83.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1066070 AT4G00730.1 69.728 773 208 9 11 777 50 802 0.0 1061
Msa1066070 AT3G61150.1 64.392 806 226 13 1 777 34 807 0.0 1014
Msa1066070 AT4G04890.2 54.717 742 295 12 52 776 21 738 0.0 794
Msa1066070 AT4G04890.1 54.717 742 295 12 52 776 21 738 0.0 794
Msa1066070 AT4G21750.2 55.252 733 261 11 84 776 55 760 0.0 772
Msa1066070 AT4G21750.1 55.252 733 261 11 84 776 55 760 0.0 772
Msa1066070 AT4G21750.3 55.252 733 261 11 84 776 55 760 0.0 772
Msa1066070 AT4G21750.4 55.252 733 261 11 84 776 55 760 0.0 772
Msa1066070 AT1G05230.8 52.668 731 310 12 50 777 23 720 0.0 758
Msa1066070 AT1G05230.4 52.668 731 310 12 50 777 23 720 0.0 758
Msa1066070 AT1G05230.9 52.668 731 310 12 50 777 23 720 0.0 758
Msa1066070 AT1G05230.10 52.668 731 310 12 50 777 23 720 0.0 758
Msa1066070 AT1G05230.7 52.668 731 310 12 50 777 23 720 0.0 758
Msa1066070 AT1G05230.11 52.668 731 310 12 50 777 23 720 0.0 758
Msa1066070 AT1G05230.2 52.668 731 310 12 50 777 23 720 0.0 758
Msa1066070 AT1G05230.6 52.668 731 310 12 50 777 23 720 0.0 758
Msa1066070 AT1G05230.5 52.668 731 310 12 50 777 23 720 0.0 758
Msa1066070 AT1G05230.1 52.668 731 310 12 50 777 23 720 0.0 758
Msa1066070 AT1G05230.3 52.668 731 308 13 50 777 23 718 0.0 755
Msa1066070 AT5G52170.3 52.843 721 268 11 61 774 24 679 0.0 746
Msa1066070 AT5G52170.1 52.843 721 268 11 61 774 24 679 0.0 746
Msa1066070 AT5G52170.2 52.479 726 268 12 61 774 24 684 0.0 739
Msa1066070 AT4G00730.2 66.224 527 154 8 11 531 50 558 0.0 684
Msa1066070 AT1G73360.1 48.069 699 330 10 91 773 32 713 0.0 631
Msa1066070 AT1G17920.2 46.571 700 320 15 94 777 24 685 0.0 613
Msa1066070 AT1G17920.1 46.571 700 320 15 94 777 24 685 0.0 613
Msa1066070 AT1G05230.12 50.987 608 268 11 50 654 23 603 0.0 607
Msa1066070 AT2G32370.1 44.253 696 340 12 91 777 68 724 0.0 577
Msa1066070 AT1G79840.1 41.750 697 349 12 88 776 98 745 0.0 560
Msa1066070 AT1G79840.3 41.750 697 349 12 88 776 40 687 0.0 559
Msa1066070 AT1G79840.6 41.750 697 349 12 88 776 40 687 0.0 559
Msa1066070 AT1G79840.2 41.750 697 349 12 88 776 127 774 0.0 558
Msa1066070 AT5G46880.3 41.944 720 371 18 84 773 104 806 2.54e-175 525
Msa1066070 AT5G46880.1 41.944 720 371 18 84 773 104 806 2.54e-175 525
Msa1066070 AT5G46880.2 41.944 720 371 18 84 773 104 806 2.54e-175 525
Msa1066070 AT4G25530.1 40.084 716 361 17 80 777 21 686 1.80e-162 487
Msa1066070 AT1G79840.4 41.623 567 283 9 88 650 98 620 5.19e-154 463
Msa1066070 AT4G17710.1 39.799 696 332 17 89 773 84 703 1.09e-148 452
Msa1066070 AT3G03260.1 36.886 713 381 16 92 775 24 696 3.19e-144 440
Msa1066070 AT5G17320.1 34.865 740 418 21 73 776 7 718 1.51e-126 395
Msa1066070 AT1G34650.1 34.177 711 411 20 98 776 23 708 3.28e-115 365
Msa1066070 AT1G79840.5 40.899 445 217 7 88 529 98 499 5.94e-109 342
Msa1066070 AT3G03260.2 35.852 569 313 14 73 622 3 538 1.12e-106 337
Msa1066070 AT5G07260.1 27.728 559 323 17 157 711 10 491 5.11e-55 199
Msa1066070 AT5G07260.2 27.828 557 320 17 157 711 10 486 5.64e-55 198
Msa1066070 AT1G30490.1 40.000 100 53 3 79 174 6 102 1.03e-12 72.4

Find 192 sgRNAs with CRISPR-Local

Find 408 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCATTTGTGTTCTTCTATTT+TGG 0.092193 7_2:+60020559 None:intergenic
GGCTCTTGTTGAAACTTTAA+TGG 0.179447 7_2:-60019656 Msa1066070:CDS
CTCGAGTTTGGTAACGTAAT+TGG 0.195999 7_2:+60020057 None:intergenic
CAGTTGTAGAGCACCATTTC+TGG 0.218972 7_2:+60019042 None:intergenic
ATGCCTTTAGGTCAAGATTT+TGG 0.233318 7_2:-60019988 Msa1066070:CDS
CTAAGCTTAGGCATGGGTTT+TGG 0.241414 7_2:-60016543 Msa1066070:CDS
AATTCTACTTTGATGAGTTT+TGG 0.258636 7_2:-60021214 Msa1066070:five_prime_UTR
CACAAACTAATGAGCCTCTT+TGG 0.274681 7_2:-60019822 Msa1066070:CDS
GTGATATCCAGTGGAATAAA+TGG 0.276732 7_2:-60019067 Msa1066070:CDS
GATAACATGGATGGTATTTC+TGG 0.280364 7_2:-60020854 Msa1066070:CDS
AGCTTCTCTGATGGTATCTA+TGG 0.310496 7_2:+60018768 None:intergenic
ACACTTGCCGGCAAGTTTCT+AGG 0.314978 7_2:-60020084 Msa1066070:CDS
ACCACCATTATCACGACTTC+TGG 0.320606 7_2:-60014185 Msa1066070:three_prime_UTR
CCAATTTCTAAACTCGAGTT+TGG 0.322467 7_2:+60020045 None:intergenic
CCAAACTCGAGTTTAGAAAT+TGG 0.322627 7_2:-60020045 Msa1066070:CDS
AAACAAGACAAGTCAAGTTT+TGG 0.322654 7_2:-60020584 Msa1066070:CDS
CCCTTTAGTTTGGAAATTCT+AGG 0.328490 7_2:-60021367 None:intergenic
GGAATGTGGGCGAGGACGTT+AGG 0.329094 7_2:-60016182 Msa1066070:CDS
ACTTAGCAAAAGGCTTTGTT+TGG 0.341498 7_2:-60020607 Msa1066070:CDS
TATGTTTCTTGAACTTGCTT+TGG 0.349553 7_2:-60019872 Msa1066070:CDS
AACTGTAGGAGGCTTCCTTC+TGG 0.355417 7_2:-60018721 Msa1066070:CDS
TTGCCTTCAACAATGCCTTT+AGG 0.357400 7_2:-60020000 Msa1066070:CDS
GACCGAGTTTGTACACTTGC+CGG 0.358469 7_2:-60020096 Msa1066070:CDS
TTCATTACTACATGCATTGC+GGG 0.358765 7_2:+60014591 None:intergenic
GGTGCACAAATGGAACAAAT+TGG 0.362490 7_2:-60016211 Msa1066070:CDS
CACAAAAGTTGTTTGTCATT+CGG 0.365281 7_2:+60016253 None:intergenic
TGAACTTGCTTTGGCTGCAA+TGG 0.370269 7_2:-60019863 Msa1066070:CDS
ATTATTAGTACTCCTTGTAT+TGG 0.382879 7_2:-60019745 Msa1066070:CDS
GAAATTTCACTAATAATTGC+TGG 0.383011 7_2:+60020171 None:intergenic
GCCTCAGAAACAAAACCATT+TGG 0.385246 7_2:+60019715 None:intergenic
GTCTATAGAGCTGGTGAACT+TGG 0.390142 7_2:+60016571 None:intergenic
TTCTGGAAAATGTTGATTGT+AGG 0.390922 7_2:-60014168 Msa1066070:three_prime_UTR
GTGCATCGACGGTGCACAAA+TGG 0.392526 7_2:-60016221 Msa1066070:CDS
TTTGTTCCTCTTGTAATTGA+AGG 0.396389 7_2:+60019946 None:intergenic
TATGCCAAATGGTTACTCTA+AGG 0.401101 7_2:-60018683 Msa1066070:intron
AGCAGCATGCAGAAGGGGTA+TGG 0.402136 7_2:-60018807 Msa1066070:CDS
GAAGGCTATTCACAAGTATC+TGG 0.404248 7_2:+60014433 None:intergenic
AAGGTTCTCAATACATAAGT+AGG 0.404265 7_2:+60021275 None:intergenic
TTGATTATATCAGACTCAAT+TGG 0.408893 7_2:-60020301 Msa1066070:intron
GTTGCCATGGTCATGTCCTT+TGG 0.409163 7_2:+60015975 None:intergenic
AATTACAAGAGGAACAAATA+TGG 0.409950 7_2:-60019941 Msa1066070:CDS
GGAATAAATGGAACCAGAAA+TGG 0.415829 7_2:-60019055 Msa1066070:CDS
ATTACCTTAGAGTAACCATT+TGG 0.422663 7_2:+60018679 None:intergenic
AATTTAGTTTCGTAGTTATG+AGG 0.423611 7_2:-60014144 Msa1066070:three_prime_UTR
CTCCCGTCGCTATGTCCATC+TGG 0.423743 7_2:+60014516 None:intergenic
TGGACGGCCTAGAAACTTGC+CGG 0.428194 7_2:+60020077 None:intergenic
CTTTGGATTAGAAGTGTTGA+AGG 0.429161 7_2:-60019805 Msa1066070:CDS
GAACATGAAAGCTGCAGATC+TGG 0.433822 7_2:-60020881 Msa1066070:CDS
TCTGGTTCCATTTATTCCAC+TGG 0.434725 7_2:+60019060 None:intergenic
TGTATTGGTTTGAAACCAAA+TGG 0.437986 7_2:-60019730 Msa1066070:CDS
AAGGAAGAGTGTGGATGATC+CGG 0.443006 7_2:-60016151 Msa1066070:CDS
TGGTGATATGAAGAGATTAA+TGG 0.448790 7_2:-60020957 Msa1066070:CDS
TGACCTAAAGGCATTGTTGA+AGG 0.455945 7_2:+60019997 None:intergenic
GGATGATCCGGGTGAGCCAC+CGG 0.456267 7_2:-60016139 Msa1066070:CDS
CAGAAATGGTGCTCTACAAC+TGG 0.456843 7_2:-60019041 Msa1066070:intron
CTCTCGCATTGGACCACCAT+TGG 0.459497 7_2:+60016011 None:intergenic
GGTTGTGAGATTGCACTAGA+AGG 0.460615 7_2:+60021171 None:intergenic
GAAACAAGCACAGACGCATC+GGG 0.460821 7_2:-60014645 Msa1066070:CDS
GACATTCACATTGGCGTTGG+AGG 0.461547 7_2:+60016499 None:intergenic
AGAAAACTCACCTCACGAAC+AGG 0.469601 7_2:+60018841 None:intergenic
GAATGTGGGCGAGGACGTTA+GGG 0.470341 7_2:-60016181 Msa1066070:CDS
TGTTAATCAAGCACCACAAA+AGG 0.471413 7_2:+60021256 None:intergenic
ACAATCCCCGGTGGCTCACC+CGG 0.478000 7_2:+60016132 None:intergenic
TTATGTTGCGCTTCTTCCGT+CGG 0.480355 7_2:-60014553 Msa1066070:CDS
AAAGACTTGAACTTAGCAAA+AGG 0.481146 7_2:-60020617 Msa1066070:CDS
TCTGGAAAATGTTGATTGTA+GGG 0.481976 7_2:-60014167 Msa1066070:three_prime_UTR
TTAGTGCAGCAACCTCAGTT+TGG 0.483693 7_2:-60016107 Msa1066070:CDS
ACGAGAAGCTTAGAAGTGAA+TGG 0.489778 7_2:-60016044 Msa1066070:CDS
TATGTTGCGCTTCTTCCGTC+GGG 0.492269 7_2:-60014552 Msa1066070:CDS
CAAATTGGATGCAGGGAATG+TGG 0.492429 7_2:-60016196 Msa1066070:CDS
GATGATCCGGGTGAGCCACC+GGG 0.500082 7_2:-60016138 Msa1066070:CDS
AAATGGAACAAATTGGATGC+AGG 0.503062 7_2:-60016204 Msa1066070:CDS
TGCTGGAGTTTGTGCATCGA+CGG 0.503912 7_2:-60016232 Msa1066070:CDS
CTAGACATTCACATTGGCGT+TGG 0.506942 7_2:+60016496 None:intergenic
CACGGTGGAATCAGTGGAAA+CGG 0.508426 7_2:-60014397 Msa1066070:CDS
ATGCCAAAATCTTGACCTAA+AGG 0.510136 7_2:+60019985 None:intergenic
CCTCCTACAGTTAAGAAAAG+TGG 0.511269 7_2:+60018732 None:intergenic
TGCAGAAGGGGTATGGGCAG+TGG 0.512805 7_2:-60018800 Msa1066070:CDS
ACTTCAAGTACTTTCTCCAT+TGG 0.513136 7_2:-60018866 Msa1066070:CDS
CGAGAAGCTTAGAAGTGAAT+GGG 0.514863 7_2:-60016043 Msa1066070:CDS
GGTGGAGCATGCAGAATATG+AGG 0.519622 7_2:-60016598 Msa1066070:CDS
CCTCCACAATTTGAACACAT+TGG 0.521367 7_2:+60020195 None:intergenic
AATCCAATGTGTTCAAATTG+TGG 0.530145 7_2:-60020198 Msa1066070:CDS
CGTGATTGTTAGAGCAAGAT+CGG 0.530561 7_2:-60014211 Msa1066070:three_prime_UTR
GAGGCTTCCTTCTGGTTGTG+TGG 0.534040 7_2:-60018713 Msa1066070:CDS
TTCTAAGCTTCTCGTTGCGA+AGG 0.534552 7_2:+60016052 None:intergenic
ACCCTTGCTAAGCTTAGGCA+TGG 0.536023 7_2:-60016550 Msa1066070:CDS
CCGTGAGCTTTGCCGTCGGA+AGG 0.537799 7_2:+60014415 None:intergenic
CTCCTACAGTTAAGAAAAGT+GGG 0.539174 7_2:+60018733 None:intergenic
AGGAAGAGTGTGGATGATCC+GGG 0.542002 7_2:-60016150 Msa1066070:CDS
TCTGAGGCTTCTAGAGAAAG+TGG 0.543217 7_2:-60019700 Msa1066070:CDS
ACTGGATATCACTTCAGTTG+TGG 0.543692 7_2:+60019078 None:intergenic
TCAAGTTCTTGAATTTGTTG+AGG 0.544285 7_2:+60020773 None:intergenic
AAATAGAAGAACACAAATGA+AGG 0.546022 7_2:-60020556 Msa1066070:intron
AAAATACAAACAACTCAAAG+TGG 0.547654 7_2:+60014281 None:intergenic
TTTGGTTTCAAACCAATACA+AGG 0.548636 7_2:+60019733 None:intergenic
GCAGCATGCAGAAGGGGTAT+GGG 0.548640 7_2:-60018806 Msa1066070:CDS
CAGATCTGGTAGTGATAACA+TGG 0.549386 7_2:-60020867 Msa1066070:CDS
CCCTTGCTAAGCTTAGGCAT+GGG 0.551648 7_2:-60016549 Msa1066070:CDS
TCCATTGGTTCCTGTTCGTG+AGG 0.554096 7_2:-60018851 Msa1066070:CDS
GGTAATGACAAGGAAGAGTG+TGG 0.554273 7_2:-60016160 Msa1066070:CDS
GAGTCGCAGCGGAGAGCGAG+TGG 0.554550 7_2:-60014477 Msa1066070:CDS
ATACCCGAGTGTTCTCTAGC+GGG 0.554784 7_2:+60016450 None:intergenic
TGCATACACTAGCTCGTAGG+AGG 0.558654 7_2:+60015944 None:intergenic
AGAAACAAGCACAGACGCAT+CGG 0.558699 7_2:-60014646 Msa1066070:CDS
TGGATTAGAAGTGTTGAAGG+TGG 0.558924 7_2:-60019802 Msa1066070:CDS
ACATTCACATTGGCGTTGGA+GGG 0.559350 7_2:+60016500 None:intergenic
AAATTGGATGCAGGGAATGT+GGG 0.562535 7_2:-60016195 Msa1066070:CDS
AACATGGATTTAATCAAAGT+AGG 0.564578 7_2:+60021135 None:intergenic
AACATATGATGCAGGTGACA+TGG 0.564953 7_2:-60016620 Msa1066070:intron
TTAGCAAGGGTCTATAGAGC+TGG 0.566123 7_2:+60016562 None:intergenic
TGTTGTTATCATAAACAGCT+TGG 0.566826 7_2:-60019677 Msa1066070:CDS
ACCCATGCCTAAGCTTAGCA+AGG 0.568460 7_2:+60016548 None:intergenic
ACCTCACGAACAGGAACCAA+TGG 0.570995 7_2:+60018850 None:intergenic
ACCATCAGAGAAGCTTCAGC+TGG 0.571588 7_2:-60018760 Msa1066070:CDS
GTAACAAATACTAATAGTAA+TGG 0.574242 7_2:-60019919 Msa1066070:CDS
CTGTTGTATAACAGAATCGA+TGG 0.574417 7_2:-60019135 Msa1066070:intron
GAGCTTCTTGCAATCACACA+AGG 0.574571 7_2:+60019100 None:intergenic
GTCGCTTGTTGTGTACGCGC+CGG 0.575675 7_2:-60014622 Msa1066070:CDS
GGTTTCGCCGTGTTACCAGA+TGG 0.577544 7_2:-60014531 Msa1066070:CDS
AAACAAACAATGGTTTGAGA+AGG 0.577871 7_2:-60020919 Msa1066070:CDS
GGATGCAGGGAATGTGGGCG+AGG 0.578994 7_2:-60016190 Msa1066070:CDS
TGGTGGTCCAATGCGAGAGA+TGG 0.579043 7_2:-60016007 Msa1066070:CDS
AATGGAACAAATTGGATGCA+GGG 0.583192 7_2:-60016203 Msa1066070:CDS
AATGGATGAGTTAGTGAAGA+TGG 0.583650 7_2:-60019845 Msa1066070:CDS
TGCATTGCGGGAATATCTAC+CGG 0.586205 7_2:+60014603 None:intergenic
ATGTGAGCCATCTCTCGCAT+TGG 0.587853 7_2:+60016000 None:intergenic
TAGCAATAAGTGCAGGAGGA+AGG 0.588813 7_2:-60016299 Msa1066070:CDS
GAGTGATGATGACATTAAGA+TGG 0.589154 7_2:+60016473 None:intergenic
CCTTCCGACGGCAAAGCTCA+CGG 0.589815 7_2:-60014415 Msa1066070:CDS
ACTCCCCGCTAGAGAACACT+CGG 0.590230 7_2:-60016454 Msa1066070:CDS
TACCAGATGGACATAGCGAC+GGG 0.591264 7_2:-60014518 Msa1066070:CDS
AGGTTCTCAATACATAAGTA+GGG 0.592741 7_2:+60021276 None:intergenic
GCTGCACTAAGCACAATCCC+CGG 0.592750 7_2:+60016120 None:intergenic
CTATGTGTAGCAATAAGTGC+AGG 0.597052 7_2:-60016306 Msa1066070:intron
TTGCAAGCAGCATGCAGAAG+GGG 0.600217 7_2:-60018812 Msa1066070:CDS
ACCAGCTGAAGCTTCTCTGA+TGG 0.600752 7_2:+60018759 None:intergenic
GTGGTTCAAGATATGCCAAA+TGG 0.603358 7_2:-60018694 Msa1066070:CDS
GATGGACATAGCGACGGGAG+TGG 0.607388 7_2:-60014513 Msa1066070:CDS
GTTCCTCTTGTAATTGAAGG+TGG 0.608032 7_2:+60019949 None:intergenic
AAAAGAAATTCTTAATCATG+AGG 0.610496 7_2:-60019779 Msa1066070:CDS
TCACCACCTTCAATTACAAG+AGG 0.610841 7_2:-60019952 Msa1066070:CDS
GGAGGGAGACACAGTTGCCA+TGG 0.612613 7_2:+60015962 None:intergenic
CCCATGCCTAAGCTTAGCAA+GGG 0.614032 7_2:+60016549 None:intergenic
GAATTTGTTGAGGAGTGTGT+CGG 0.614112 7_2:+60020783 None:intergenic
AAAGCTCACGGTGGAATCAG+TGG 0.620306 7_2:-60014403 Msa1066070:CDS
TCCACCGTGAGCTTTGCCGT+CGG 0.623528 7_2:+60014411 None:intergenic
GTCACGAGAATTCACTACTT+AGG 0.625972 7_2:-60020275 Msa1066070:CDS
TCCAGAAGTCGTGATAATGG+TGG 0.628520 7_2:+60014184 None:intergenic
TCTGGTAGTGATAACATGGA+TGG 0.630519 7_2:-60020863 Msa1066070:CDS
GAATGGGACATACTCTCCAA+TGG 0.631124 7_2:-60016027 Msa1066070:CDS
TGCCGGCAAGTGTACAAACT+CGG 0.632620 7_2:+60020094 None:intergenic
TCAACACTTCTAATCCAAAG+AGG 0.632924 7_2:+60019808 None:intergenic
TTAATCATGAGGAATATACA+AGG 0.633009 7_2:-60019768 Msa1066070:CDS
TTTGCAAGCAGCATGCAGAA+GGG 0.633056 7_2:-60018813 Msa1066070:CDS
TAGACTAGATGAGTTGAACA+TGG 0.633577 7_2:+60021119 None:intergenic
TACCCGAGTGTTCTCTAGCG+GGG 0.640607 7_2:+60016451 None:intergenic
TCTTGAACCACACAACCAGA+AGG 0.644378 7_2:+60018706 None:intergenic
GTTCATTACTACATGCATTG+CGG 0.652040 7_2:+60014590 None:intergenic
ATATGCATACACTAGCTCGT+AGG 0.653193 7_2:+60015941 None:intergenic
TATAGACCCTTGCTAAGCTT+AGG 0.654709 7_2:-60016555 Msa1066070:CDS
ACATATGATGCAGGTGACAT+GGG 0.655326 7_2:-60016619 Msa1066070:intron
GCATACACTAGCTCGTAGGA+GGG 0.655354 7_2:+60015945 None:intergenic
GAGATGGCTCACATTGCCAA+AGG 0.656074 7_2:-60015991 Msa1066070:CDS
GGTAACACGGCGAAACCCGA+CGG 0.657528 7_2:+60014537 None:intergenic
ACAACTGAAGTGATATCCAG+TGG 0.658205 7_2:-60019076 Msa1066070:CDS
AGATGGCTAGACATTCACAT+TGG 0.658957 7_2:+60016490 None:intergenic
GCAATGCATGTAGTAATGAA+CGG 0.659870 7_2:-60014588 Msa1066070:CDS
TTACCAGATGGACATAGCGA+CGG 0.660884 7_2:-60014519 Msa1066070:CDS
TGTGTAGCAATAAGTGCAGG+AGG 0.662801 7_2:-60016303 Msa1066070:intron
TGTCAATAAGAGAAGCAATG+AGG 0.665809 7_2:-60020221 Msa1066070:CDS
CCAATGTGTTCAAATTGTGG+AGG 0.666399 7_2:-60020195 Msa1066070:CDS
GCTATGTCCATCTGGTAACA+CGG 0.669438 7_2:+60014524 None:intergenic
ACTTGTGAATAGCCTTCCGA+CGG 0.670143 7_2:-60014427 Msa1066070:CDS
ATGATCCGGGTGAGCCACCG+GGG 0.670578 7_2:-60016137 Msa1066070:CDS
AGTTTGGTAACGTAATTGGA+CGG 0.674661 7_2:+60020061 None:intergenic
ATCACGATGACGAGTCGCAG+CGG 0.675053 7_2:-60014488 Msa1066070:CDS
TGGGACATACTCTCCAATGG+TGG 0.679385 7_2:-60016024 Msa1066070:CDS
CAAACAAATATAGAAGCACA+TGG 0.682781 7_2:-60020980 Msa1066070:CDS
TATACCCGAGTGTTCTCTAG+CGG 0.685435 7_2:+60016449 None:intergenic
TATGATGCAGGTGACATGGG+TGG 0.686232 7_2:-60016616 Msa1066070:intron
ATTGCCAAAGGACATGACCA+TGG 0.701545 7_2:-60015979 Msa1066070:CDS
GCACTAAGCACAATCCCCGG+TGG 0.713315 7_2:+60016123 None:intergenic
AGCTTCTTGCAATCACACAA+GGG 0.721070 7_2:+60019101 None:intergenic
AAACAAGCACAGACGCATCG+GGG 0.726013 7_2:-60014644 Msa1066070:CDS
AGGACGTTAGGGTAATGACA+AGG 0.727528 7_2:-60016170 Msa1066070:CDS
TGAAGCGGGTAGCCAAACTG+AGG 0.731803 7_2:+60016095 None:intergenic
AAAGTAGGAGTTGATAAACG+AGG 0.741773 7_2:+60021150 None:intergenic
ACAAATATAGAAGCACATGG+TGG 0.744180 7_2:-60020977 Msa1066070:CDS
CTCCCCGCTAGAGAACACTC+GGG 0.746565 7_2:-60016453 Msa1066070:intron
TCCGACGGCAAAGCTCACGG+TGG 0.748267 7_2:-60014412 Msa1066070:CDS
ATGCATGTAGTAATGAACGG+CGG 0.775511 7_2:-60014585 Msa1066070:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GTTTATAAAAAATAATTGTT+TGG - chr7_2:60014803-60014822 Msa1066070:intron 10.0%
!! ATAAATTTAGAAACAAAAAA+TGG - chr7_2:60015087-60015106 Msa1066070:intron 10.0%
!!! TTATTTATTTTCATTTTACA+TGG - chr7_2:60015953-60015972 Msa1066070:CDS 10.0%
!!! AATTTTTTATATACATCTAT+TGG + chr7_2:60016904-60016923 None:intergenic 10.0%
!!! TTTATTTATTTATTTCAAGT+TGG - chr7_2:60017298-60017317 Msa1066070:intron 10.0%
!! CATTATAAAATTAATAACAT+GGG + chr7_2:60017511-60017530 None:intergenic 10.0%
!!! CATGTTATTAATTTTATAAT+GGG - chr7_2:60017510-60017529 Msa1066070:intron 10.0%
!! CAACAAATTAATTATTTAAA+AGG + chr7_2:60017893-60017912 None:intergenic 10.0%
!! TAATAAAAAACACTTAATTA+TGG + chr7_2:60019692-60019711 None:intergenic 10.0%
!!! TTTTTTATGTTCTTTTTGTT+TGG - chr7_2:60014479-60014498 Msa1066070:CDS 15.0%
!!! TTTTTATGTTCTTTTTGTTT+GGG - chr7_2:60014480-60014499 Msa1066070:CDS 15.0%
!!! TTTTGTCTTTTATATTTTGT+AGG - chr7_2:60014827-60014846 Msa1066070:intron 15.0%
!! AAAAAAATAAAATTAGAGAC+CGG + chr7_2:60015119-60015138 None:intergenic 15.0%
!! AAAATAAATAAATCATCCTA+AGG + chr7_2:60015944-60015963 None:intergenic 15.0%
!! CATATGATAATTGTAAAAAT+TGG + chr7_2:60016095-60016114 None:intergenic 15.0%
!! CTAAAACATTATAGTATTAA+TGG + chr7_2:60016528-60016547 None:intergenic 15.0%
!!! TTTAAAGTGATGAAAATAAA+AGG + chr7_2:60016554-60016573 None:intergenic 15.0%
!!! TTTATTACTTTTTGGAATTT+GGG + chr7_2:60017162-60017181 None:intergenic 15.0%
!! CATAGATTACAAAAATTATT+AGG + chr7_2:60017212-60017231 None:intergenic 15.0%
!!! AATTTTTGTAATCTATGTAA+AGG - chr7_2:60017215-60017234 Msa1066070:intron 15.0%
!! CCATTATAAAATTAATAACA+TGG + chr7_2:60017512-60017531 None:intergenic 15.0%
!!! CCATGTTATTAATTTTATAA+TGG - chr7_2:60017509-60017528 Msa1066070:intron 15.0%
!! GTTATATAATATATTCAATG+TGG - chr7_2:60018068-60018087 Msa1066070:intron 15.0%
!!! TAATCAAGTGTTTTAAAAAA+TGG - chr7_2:60019715-60019734 Msa1066070:CDS 15.0%
!! AATTTGAGCTATTTATTTAT+GGG - chr7_2:60019934-60019953 Msa1066070:CDS 15.0%
!! TTTGATCATATATAAACAAA+GGG + chr7_2:60020138-60020157 None:intergenic 15.0%
!! AATTGAAATTTAGAAATGAA+TGG - chr7_2:60020195-60020214 Msa1066070:CDS 15.0%
!!! TTTTCTAAACATCAAAATTT+AGG + chr7_2:60020497-60020516 None:intergenic 15.0%
!!! AATTTTCATCAAACAAACAA+TGG - chr7_2:60014572-60014591 Msa1066070:CDS 20.0%
!!! AACTTTTTTTTTCTTCTTCT+AGG + chr7_2:60015056-60015075 None:intergenic 20.0%
!! AAACAAAAAATGGTAAAAAC+CGG - chr7_2:60015097-60015116 Msa1066070:intron 20.0%
!!! AGTTTAGAAATTGGTTTTAA+TGG - chr7_2:60015465-60015484 Msa1066070:intron 20.0%
!! GTAACAAATACTAATAGTAA+TGG - chr7_2:60015582-60015601 Msa1066070:intron 20.0%
!! AAAAGAAATTCTTAATCATG+AGG - chr7_2:60015722-60015741 Msa1066070:intron 20.0%
!!! TAATCAAGCTATTTTTTTGA+AGG - chr7_2:60016144-60016163 Msa1066070:CDS 20.0%
!! TTGCAAATATAATTTCTTAG+TGG - chr7_2:60016292-60016311 Msa1066070:CDS 20.0%
!!! GCATCATGTATTTTATAAAA+GGG + chr7_2:60016877-60016896 None:intergenic 20.0%
!!! TGCATCATGTATTTTATAAA+AGG + chr7_2:60016878-60016897 None:intergenic 20.0%
!! AGAGATGAAAAATACAAAAT+TGG + chr7_2:60017060-60017079 None:intergenic 20.0%
!!! CTTTATTACTTTTTGGAATT+TGG + chr7_2:60017163-60017182 None:intergenic 20.0%
!! CAAATTCCAAAAAGTAATAA+AGG - chr7_2:60017161-60017180 Msa1066070:intron 20.0%
!!! ATTGAGCAATATTTTAAAGT+TGG - chr7_2:60017350-60017369 Msa1066070:intron 20.0%
!!! TTGAGCAATATTTTAAAGTT+GGG - chr7_2:60017351-60017370 Msa1066070:intron 20.0%
!! TTGAGAGACTAATTATAAAA+GGG + chr7_2:60017705-60017724 None:intergenic 20.0%
!! TTTGAGAGACTAATTATAAA+AGG + chr7_2:60017706-60017725 None:intergenic 20.0%
!! CAAGTACATACATAAAATAA+TGG + chr7_2:60018254-60018273 None:intergenic 20.0%
!! AGCTCATATATACTAAAATT+TGG + chr7_2:60018489-60018508 None:intergenic 20.0%
!! TAATAACTCGATTATTTAGA+AGG - chr7_2:60018587-60018606 Msa1066070:intron 20.0%
!! TTAGACTATGAAATTTGTAA+CGG - chr7_2:60018633-60018652 Msa1066070:intron 20.0%
!! TAATGGTATAACTAATAACA+TGG - chr7_2:60018846-60018865 Msa1066070:CDS 20.0%
!! TAAGAAAATGATATTGAAGA+TGG + chr7_2:60019590-60019609 None:intergenic 20.0%
!! ACTTAATTATGGTATTAGTT+TGG + chr7_2:60019681-60019700 None:intergenic 20.0%
!! AATTGAATCATATTTCACTA+TGG + chr7_2:60019918-60019937 None:intergenic 20.0%
!! CAATTTGAGCTATTTATTTA+TGG - chr7_2:60019933-60019952 Msa1066070:CDS 20.0%
!! TCAATGTAAATATACTACTT+TGG + chr7_2:60019999-60020018 None:intergenic 20.0%
!! TAAAAATAGAAACATTGCAT+TGG + chr7_2:60020076-60020095 None:intergenic 20.0%
!! GTTTGATCATATATAAACAA+AGG + chr7_2:60020139-60020158 None:intergenic 20.0%
!!! AAATTTAGGTTAAAAGAATG+AGG + chr7_2:60020483-60020502 None:intergenic 20.0%
!! GAAAAAGAAAACAAAAAATG+TGG - chr7_2:60020512-60020531 Msa1066070:intron 20.0%
!!! CTTATATCATGAAATTTTGT+TGG - chr7_2:60020627-60020646 Msa1066070:CDS 20.0%
!!! TTTGATTTTTAGAGTTTTGT+TGG + chr7_2:60020754-60020773 None:intergenic 20.0%
!! AATTCTACTTTGATGAGTTT+TGG - chr7_2:60014287-60014306 Msa1066070:three_prime_UTR 25.0%
! AACATGGATTTAATCAAAGT+AGG + chr7_2:60014369-60014388 None:intergenic 25.0%
!! TCATTTGTGTTCTTCTATTT+TGG + chr7_2:60014945-60014964 None:intergenic 25.0%
! AAATAGAAGAACACAAATGA+AGG - chr7_2:60014945-60014964 Msa1066070:intron 25.0%
!! GGAATAGTATCTTTTTCTTT+TGG - chr7_2:60015008-60015027 Msa1066070:intron 25.0%
!! TGGAGTTCAATATTTTCATA+CGG - chr7_2:60015028-60015047 Msa1066070:intron 25.0%
! TTGATTATATCAGACTCAAT+TGG - chr7_2:60015200-60015219 Msa1066070:intron 25.0%
! GAAATTTCACTAATAATTGC+TGG + chr7_2:60015333-60015352 None:intergenic 25.0%
! AATTACAAGAGGAACAAATA+TGG - chr7_2:60015560-60015579 Msa1066070:intron 25.0%
!!! TAATGGTTTTGATAGATCAA+TGG - chr7_2:60015599-60015618 Msa1066070:intron 25.0%
! TTAATCATGAGGAATATACA+AGG - chr7_2:60015733-60015752 Msa1066070:intron 25.0%
! ATTATTAGTACTCCTTGTAT+TGG - chr7_2:60015756-60015775 Msa1066070:intron 25.0%
! TTGAATGAAGTAGTTGAAAA+AGG + chr7_2:60015881-60015900 None:intergenic 25.0%
!! TAGTCATTTCTTTTGACAAA+TGG + chr7_2:60016070-60016089 None:intergenic 25.0%
!!! GTTTAATTTGAACTATGTCA+TGG - chr7_2:60016114-60016133 Msa1066070:CDS 25.0%
!!! TAACATTGGTTTACATGTTA+GGG - chr7_2:60017018-60017037 Msa1066070:intron 25.0%
!!! GTGAATCCTTTATTACTTTT+TGG + chr7_2:60017170-60017189 None:intergenic 25.0%
!!! TGAGCAATATTTTAAAGTTG+GGG - chr7_2:60017352-60017371 Msa1066070:intron 25.0%
! TATAAAAGGGTAATGTTAAC+CGG + chr7_2:60017692-60017711 None:intergenic 25.0%
! TGAATCCATTAATTGAATCA+TGG - chr7_2:60017815-60017834 Msa1066070:intron 25.0%
! TGAACCCTATAAAAACATAT+AGG - chr7_2:60018042-60018061 Msa1066070:intron 25.0%
!!! CTGACCTATATGTTTTTATA+GGG + chr7_2:60018049-60018068 None:intergenic 25.0%
!!! ACTGACCTATATGTTTTTAT+AGG + chr7_2:60018050-60018069 None:intergenic 25.0%
! GTCTATTATCTTGATTCAAA+GGG + chr7_2:60018095-60018114 None:intergenic 25.0%
! AGTCTATTATCTTGATTCAA+AGG + chr7_2:60018096-60018115 None:intergenic 25.0%
!!! TCTTTTTGCTATAAGTGTTT+GGG - chr7_2:60018126-60018145 Msa1066070:intron 25.0%
! TTGATTATGATCATGATTCA+TGG + chr7_2:60018370-60018389 None:intergenic 25.0%
!! CATAGTCTAAGCTTTAATAA+TGG + chr7_2:60018623-60018642 None:intergenic 25.0%
! AATAGCTAACAATTATGTTG+TGG - chr7_2:60018734-60018753 Msa1066070:CDS 25.0%
!! TATTTCACTATGGTAATGTT+CGG + chr7_2:60019908-60019927 None:intergenic 25.0%
! AAGACAATTTGTAACAGAAA+AGG - chr7_2:60020369-60020388 Msa1066070:intron 25.0%
! AGACAATTTGTAACAGAAAA+GGG - chr7_2:60020370-60020389 Msa1066070:intron 25.0%
!!! AGTTTCAGATTTTGACTTTT+TGG + chr7_2:60020420-60020439 None:intergenic 25.0%
! CTCAAAAGTTAGAAAAATGT+AGG + chr7_2:60020454-60020473 None:intergenic 25.0%
!!! GTCTTTTTCGTTAAGTTTTA+GGG + chr7_2:60020570-60020589 None:intergenic 25.0%
!!! TGTCTTTTTCGTTAAGTTTT+AGG + chr7_2:60020571-60020590 None:intergenic 25.0%
!!! TTGTTTTTTTTTCTCTTTGC+AGG - chr7_2:60020795-60020814 Msa1066070:CDS 25.0%
! AAAATACAAACAACTCAAAG+TGG + chr7_2:60021223-60021242 None:intergenic 25.0%
!! AATTTAGTTTCGTAGTTATG+AGG - chr7_2:60021357-60021376 Msa1066070:five_prime_UTR 25.0%
AGGTTCTCAATACATAAGTA+GGG + chr7_2:60014228-60014247 None:intergenic 30.0%
AAGGTTCTCAATACATAAGT+AGG + chr7_2:60014229-60014248 None:intergenic 30.0%
! TATGTATTGAGAACCTTTTG+TGG - chr7_2:60014232-60014251 Msa1066070:three_prime_UTR 30.0%
! CAAACAAATATAGAAGCACA+TGG - chr7_2:60014521-60014540 Msa1066070:CDS 30.0%
TGGTGATATGAAGAGATTAA+TGG - chr7_2:60014544-60014563 Msa1066070:CDS 30.0%
AAACAAACAATGGTTTGAGA+AGG - chr7_2:60014582-60014601 Msa1066070:CDS 30.0%
!!! TGATAACGTTTTTTTCTTGG+CGG + chr7_2:60014698-60014717 None:intergenic 30.0%
!! TCAAGTTCTTGAATTTGTTG+AGG + chr7_2:60014731-60014750 None:intergenic 30.0%
!!! TCAAGTCTTTGTTTTTCATC+AGG + chr7_2:60014874-60014893 None:intergenic 30.0%
AAAGACTTGAACTTAGCAAA+AGG - chr7_2:60014884-60014903 Msa1066070:intron 30.0%
! AAACAAGACAAGTCAAGTTT+TGG - chr7_2:60014917-60014936 Msa1066070:intron 30.0%
!!! ACTTCTGGAAAGTGTTTTTT+TGG + chr7_2:60014974-60014993 None:intergenic 30.0%
AATCCAATGTGTTCAAATTG+TGG - chr7_2:60015303-60015322 Msa1066070:intron 30.0%
TTTGTTCCTCTTGTAATTGA+AGG + chr7_2:60015558-60015577 None:intergenic 30.0%
!! GTTTTGATAGATCAATGGAA+AGG - chr7_2:60015604-60015623 Msa1066070:intron 30.0%
! TATGTTTCTTGAACTTGCTT+TGG - chr7_2:60015629-60015648 Msa1066070:intron 30.0%
! TTTGGTTTCAAACCAATACA+AGG + chr7_2:60015771-60015790 None:intergenic 30.0%
!! TGTATTGGTTTGAAACCAAA+TGG - chr7_2:60015771-60015790 Msa1066070:intron 30.0%
TGTTGTTATCATAAACAGCT+TGG - chr7_2:60015824-60015843 Msa1066070:intron 30.0%
ATTACCTTAGAGTAACCATT+TGG + chr7_2:60016825-60016844 None:intergenic 30.0%
! GCAAAATTAGCTTCTAACAT+TGG - chr7_2:60017004-60017023 Msa1066070:intron 30.0%
!! CTAACATTGGTTTACATGTT+AGG - chr7_2:60017017-60017036 Msa1066070:intron 30.0%
!!! TTACTTTTTGGAATTTGGGA+AGG + chr7_2:60017158-60017177 None:intergenic 30.0%
AAACAGTTGAGATAGTAGTA+CGG + chr7_2:60017257-60017276 None:intergenic 30.0%
GTGTACAAGTAATTGAAACA+TGG - chr7_2:60017320-60017339 Msa1066070:intron 30.0%
!!! CAATATTTTAAAGTTGGGGA+GGG - chr7_2:60017356-60017375 Msa1066070:intron 30.0%
!!! AATATTTTAAAGTTGGGGAG+GGG - chr7_2:60017357-60017376 Msa1066070:intron 30.0%
TGATTTCTTAACCAATGATC+CGG - chr7_2:60017661-60017680 Msa1066070:intron 30.0%
GACTTCCATGATTCAATTAA+TGG + chr7_2:60017823-60017842 None:intergenic 30.0%
! AGTCTCCATCACTTAAATTT+TGG - chr7_2:60017839-60017858 Msa1066070:intron 30.0%
AGCTACCAAAATTTAAGTGA+TGG + chr7_2:60017847-60017866 None:intergenic 30.0%
! TTTTTATAGGGTTCAAAACC+AGG + chr7_2:60018037-60018056 None:intergenic 30.0%
!! GTCTTTTTGCTATAAGTGTT+TGG - chr7_2:60018125-60018144 Msa1066070:intron 30.0%
!!! ATTTGCTATATTTTGCAGTG+TGG + chr7_2:60018161-60018180 None:intergenic 30.0%
GCTACGTGCAATATAAAATT+AGG + chr7_2:60018193-60018212 None:intergenic 30.0%
TACTAGATAAAGTCATCATC+CGG + chr7_2:60018228-60018247 None:intergenic 30.0%
CAAGTATGAACAGAAAATCT+TGG + chr7_2:60018336-60018355 None:intergenic 30.0%
CAAACGTAACTACTAATTTC+AGG - chr7_2:60018558-60018577 Msa1066070:intron 30.0%
!! TATGAAATTTGTAACGGACT+TGG - chr7_2:60018639-60018658 Msa1066070:intron 30.0%
TACAATAAACTTCGCAAAGT+TGG - chr7_2:60018790-60018809 Msa1066070:CDS 30.0%
ACAATAAACTTCGCAAAGTT+GGG - chr7_2:60018791-60018810 Msa1066070:CDS 30.0%
AAGTTGGGATTTCATGAATA+TGG - chr7_2:60018806-60018825 Msa1066070:CDS 30.0%
TTTACATGAACATATGATGC+AGG - chr7_2:60018873-60018892 Msa1066070:CDS 30.0%
CACAAAAGTTGTTTGTCATT+CGG + chr7_2:60019251-60019270 None:intergenic 30.0%
! AGGAAATCAAAGACTTTTTG+TGG + chr7_2:60019432-60019451 None:intergenic 30.0%
AGAAACATTGCATTGGAAAA+TGG + chr7_2:60020069-60020088 None:intergenic 30.0%
AAATGCTAAATAGTGTCCTT+GGG + chr7_2:60020115-60020134 None:intergenic 30.0%
ATGAAAAGGTGAAATTGAGA+AGG - chr7_2:60020315-60020334 Msa1066070:intron 30.0%
AAACAAAAAATGTGGTACCA+AGG - chr7_2:60020520-60020539 Msa1066070:intron 30.0%
!!! TTTTCGTTAAGTTTTAGGGT+TGG + chr7_2:60020566-60020585 None:intergenic 30.0%
! TTCTGGAAAATGTTGATTGT+AGG - chr7_2:60021333-60021352 Msa1066070:five_prime_UTR 30.0%
! TCTGGAAAATGTTGATTGTA+GGG - chr7_2:60021334-60021353 Msa1066070:five_prime_UTR 30.0%
TGTTAATCAAGCACCACAAA+AGG + chr7_2:60014248-60014267 None:intergenic 35.0%
!! AAAGTAGGAGTTGATAAACG+AGG + chr7_2:60014354-60014373 None:intergenic 35.0%
! TAGACTAGATGAGTTGAACA+TGG + chr7_2:60014385-60014404 None:intergenic 35.0%
! ACAAATATAGAAGCACATGG+TGG - chr7_2:60014524-60014543 Msa1066070:CDS 35.0%
GATAACATGGATGGTATTTC+TGG - chr7_2:60014647-60014666 Msa1066070:CDS 35.0%
!!! TTTTTTTCTTGGCGGATTGT+CGG + chr7_2:60014690-60014709 None:intergenic 35.0%
!!! CGGTGATAACGTTTTTTTCT+TGG + chr7_2:60014701-60014720 None:intergenic 35.0%
!!! CTTTGTTTTTCATCAGGATG+AGG + chr7_2:60014868-60014887 None:intergenic 35.0%
!! ACTTAGCAAAAGGCTTTGTT+TGG - chr7_2:60014894-60014913 Msa1066070:intron 35.0%
CATGTGAATACAAAGACTTC+TGG + chr7_2:60014989-60015008 None:intergenic 35.0%
CAGAAGTCTTTGTATTCACA+TGG - chr7_2:60014987-60015006 Msa1066070:intron 35.0%
TGTCAATAAGAGAAGCAATG+AGG - chr7_2:60015280-60015299 Msa1066070:intron 35.0%
!! AGTTTGGTAACGTAATTGGA+CGG + chr7_2:60015443-60015462 None:intergenic 35.0%
CCAATTTCTAAACTCGAGTT+TGG + chr7_2:60015459-60015478 None:intergenic 35.0%
CCAAACTCGAGTTTAGAAAT+TGG - chr7_2:60015456-60015475 Msa1066070:intron 35.0%
! ATGCCTTTAGGTCAAGATTT+TGG - chr7_2:60015513-60015532 Msa1066070:intron 35.0%
ATGCCAAAATCTTGACCTAA+AGG + chr7_2:60015519-60015538 None:intergenic 35.0%
!! TTTAGGTCAAGATTTTGGCA+TGG - chr7_2:60015518-60015537 Msa1066070:intron 35.0%
AATGGATGAGTTAGTGAAGA+TGG - chr7_2:60015656-60015675 Msa1066070:intron 35.0%
TCAACACTTCTAATCCAAAG+AGG + chr7_2:60015696-60015715 None:intergenic 35.0%
!! CTTTGGATTAGAAGTGTTGA+AGG - chr7_2:60015696-60015715 Msa1066070:intron 35.0%
!!! ACCAAATGGTTTTGTTTCTG+AGG - chr7_2:60015785-60015804 Msa1066070:intron 35.0%
GGCTCTTGTTGAAACTTTAA+TGG - chr7_2:60015845-60015864 Msa1066070:intron 35.0%
CTAAGGCAAGAATGATTGAA+AGG + chr7_2:60015927-60015946 None:intergenic 35.0%
CTTTCAATCATTCTTGCCTT+AGG - chr7_2:60015925-60015944 Msa1066070:intron 35.0%
CTGTTGTATAACAGAATCGA+TGG - chr7_2:60016366-60016385 Msa1066070:intron 35.0%
GTGATATCCAGTGGAATAAA+TGG - chr7_2:60016434-60016453 Msa1066070:intron 35.0%
GGAATAAATGGAACCAGAAA+TGG - chr7_2:60016446-60016465 Msa1066070:intron 35.0%
ACTTCAAGTACTTTCTCCAT+TGG - chr7_2:60016635-60016654 Msa1066070:intron 35.0%
CTCCTACAGTTAAGAAAAGT+GGG + chr7_2:60016771-60016790 None:intergenic 35.0%
TATGCCAAATGGTTACTCTA+AGG - chr7_2:60016818-60016837 Msa1066070:intron 35.0%
!!! GCAATATTTTAAAGTTGGGG+AGG - chr7_2:60017355-60017374 Msa1066070:intron 35.0%
!!! ATATTTTAAAGTTGGGGAGG+GGG - chr7_2:60017358-60017377 Msa1066070:intron 35.0%
AACACAAAGCTAAGGAATCA+TGG - chr7_2:60017383-60017402 Msa1066070:intron 35.0%
ATGAGCTTTCTAAGTTGCTT+GGG + chr7_2:60017421-60017440 None:intergenic 35.0%
! TTTTGTGATAGACACAAGAG+AGG + chr7_2:60017753-60017772 None:intergenic 35.0%
AGTGATGAACACATCAATGT+AGG - chr7_2:60017781-60017800 Msa1066070:intron 35.0%
CATCAATGTAGGTGAAATCT+AGG - chr7_2:60017792-60017811 Msa1066070:intron 35.0%
ACTAGATAAAGTCATCATCC+GGG + chr7_2:60018227-60018246 None:intergenic 35.0%
CTGTTCATACTTGTACATCA+TGG - chr7_2:60018343-60018362 Msa1066070:intron 35.0%
TGGCAAAATCACATTATTCG+CGG + chr7_2:60018469-60018488 None:intergenic 35.0%
CGATGTGTTTCACAAGATTA+CGG + chr7_2:60018532-60018551 None:intergenic 35.0%
GATTATTTAGAAGGATGCGT+CGG - chr7_2:60018596-60018615 Msa1066070:intron 35.0%
TGGGATTTCATGAATATGGT+AGG - chr7_2:60018810-60018829 Msa1066070:CDS 35.0%
ATATGGTAGGAAAATGAGCA+TGG - chr7_2:60018823-60018842 Msa1066070:CDS 35.0%
TAGGAAAATGAGCATGGTAA+TGG - chr7_2:60018829-60018848 Msa1066070:CDS 35.0%
! GAGTGATGATGACATTAAGA+TGG + chr7_2:60019031-60019050 None:intergenic 35.0%
TATTTGTCCACAATAACCCA+CGG - chr7_2:60019162-60019181 Msa1066070:intron 35.0%
! ATGACAAACAACTTTTGTGC+TGG - chr7_2:60019252-60019271 Msa1066070:intron 35.0%
AAATGGAACAAATTGGATGC+AGG - chr7_2:60019297-60019316 Msa1066070:intron 35.0%
AATGGAACAAATTGGATGCA+GGG - chr7_2:60019298-60019317 Msa1066070:intron 35.0%
! AAAGACTTTTTGTGGTGAAG+CGG + chr7_2:60019424-60019443 None:intergenic 35.0%
GGTAATGTTCGGCAATAATA+TGG + chr7_2:60019897-60019916 None:intergenic 35.0%
CATTGGAAAATGGTGAAAAG+TGG + chr7_2:60020059-60020078 None:intergenic 35.0%
AATGCTAAATAGTGTCCTTG+GGG + chr7_2:60020114-60020133 None:intergenic 35.0%
GAAATGCTAAATAGTGTCCT+TGG + chr7_2:60020116-60020135 None:intergenic 35.0%
AGGACAGGGTTGAAAATATT+TGG - chr7_2:60020335-60020354 Msa1066070:intron 35.0%
GTAGTCAATAAGTCAAACCT+TGG + chr7_2:60020540-60020559 None:intergenic 35.0%
TTCATTACTACATGCATTGC+GGG + chr7_2:60020913-60020932 None:intergenic 35.0%
GTTCATTACTACATGCATTG+CGG + chr7_2:60020914-60020933 None:intergenic 35.0%
GCAATGCATGTAGTAATGAA+CGG - chr7_2:60020913-60020932 Msa1066070:CDS 35.0%
! TTTTCCAGAAGTCGTGATAA+TGG + chr7_2:60021323-60021342 None:intergenic 35.0%
! CAGATCTGGTAGTGATAACA+TGG - chr7_2:60014634-60014653 Msa1066070:CDS 40.0%
! TCTGGTAGTGATAACATGGA+TGG - chr7_2:60014638-60014657 Msa1066070:CDS 40.0%
!! GAATTTGTTGAGGAGTGTGT+CGG + chr7_2:60014721-60014740 None:intergenic 40.0%
GTCACGAGAATTCACTACTT+AGG - chr7_2:60015226-60015245 Msa1066070:intron 40.0%
CCTCCACAATTTGAACACAT+TGG + chr7_2:60015309-60015328 None:intergenic 40.0%
CCAATGTGTTCAAATTGTGG+AGG - chr7_2:60015306-60015325 Msa1066070:intron 40.0%
!! CTCGAGTTTGGTAACGTAAT+TGG + chr7_2:60015447-60015466 None:intergenic 40.0%
TTGCCTTCAACAATGCCTTT+AGG - chr7_2:60015501-60015520 Msa1066070:intron 40.0%
!! TGACCTAAAGGCATTGTTGA+AGG + chr7_2:60015507-60015526 None:intergenic 40.0%
TCACCACCTTCAATTACAAG+AGG - chr7_2:60015549-60015568 Msa1066070:intron 40.0%
GTTCCTCTTGTAATTGAAGG+TGG + chr7_2:60015555-60015574 None:intergenic 40.0%
CACAAACTAATGAGCCTCTT+TGG - chr7_2:60015679-60015698 Msa1066070:intron 40.0%
!! TGGATTAGAAGTGTTGAAGG+TGG - chr7_2:60015699-60015718 Msa1066070:intron 40.0%
GCCTCAGAAACAAAACCATT+TGG + chr7_2:60015789-60015808 None:intergenic 40.0%
GAAAGGCTAAGAAGAGAAGT+TGG + chr7_2:60015910-60015929 None:intergenic 40.0%
AGCTTCTTGCAATCACACAA+GGG + chr7_2:60016403-60016422 None:intergenic 40.0%
ACTGGATATCACTTCAGTTG+TGG + chr7_2:60016426-60016445 None:intergenic 40.0%
ACAACTGAAGTGATATCCAG+TGG - chr7_2:60016425-60016444 Msa1066070:intron 40.0%
! TCTGGTTCCATTTATTCCAC+TGG + chr7_2:60016444-60016463 None:intergenic 40.0%
! TTCGTGAGGTGAGTTTTCTA+AGG - chr7_2:60016664-60016683 Msa1066070:intron 40.0%
AGCTTCTCTGATGGTATCTA+TGG + chr7_2:60016736-60016755 None:intergenic 40.0%
!! CACCCACTTTTCTTAACTGT+AGG - chr7_2:60016766-60016785 Msa1066070:intron 40.0%
CCTCCTACAGTTAAGAAAAG+TGG + chr7_2:60016772-60016791 None:intergenic 40.0%
!! CCACTTTTCTTAACTGTAGG+AGG - chr7_2:60016769-60016788 Msa1066070:intron 40.0%
GTGGTTCAAGATATGCCAAA+TGG - chr7_2:60016807-60016826 Msa1066070:intron 40.0%
CATGAGCTTTCTAAGTTGCT+TGG + chr7_2:60017422-60017441 None:intergenic 40.0%
CAAGCAACTTAGAAAGCTCA+TGG - chr7_2:60017420-60017439 Msa1066070:intron 40.0%
TCATGTTAACCGATGTTCTC+CGG - chr7_2:60017533-60017552 Msa1066070:intron 40.0%
AAGTTTCCTTAACCAGTGTC+CGG + chr7_2:60017555-60017574 None:intergenic 40.0%
AGTCTCTCAAATATGCAACC+TGG - chr7_2:60017715-60017734 Msa1066070:intron 40.0%
GTCTCTCAAATATGCAACCT+GGG - chr7_2:60017716-60017735 Msa1066070:intron 40.0%
TCTATTCCAATCTCTCATGC+AGG - chr7_2:60017965-60017984 Msa1066070:intron 40.0%
TCATGAAATTGTGTGTGACC+TGG - chr7_2:60018016-60018035 Msa1066070:intron 40.0%
!! ACGTAGCTTCTCTAAAATCC+CGG - chr7_2:60018206-60018225 Msa1066070:intron 40.0%
TCTCCATAAGGTAGATACCT+TGG - chr7_2:60018279-60018298 Msa1066070:intron 40.0%
! AGACCAAGGTATCTACCTTA+TGG + chr7_2:60018285-60018304 None:intergenic 40.0%
AGAAAATCTTGGAGAAAGCC+TGG + chr7_2:60018325-60018344 None:intergenic 40.0%
CACATGTTGAACAGGAATGA+AGG + chr7_2:60018403-60018422 None:intergenic 40.0%
ATCAGTCACACATGTTGAAC+AGG + chr7_2:60018411-60018430 None:intergenic 40.0%
TTCACAAGATTACGGTGACA+TGG + chr7_2:60018524-60018543 None:intergenic 40.0%
AACATATGATGCAGGTGACA+TGG - chr7_2:60018881-60018900 Msa1066070:intron 40.0%
ACATATGATGCAGGTGACAT+GGG - chr7_2:60018882-60018901 Msa1066070:intron 40.0%
TATAGACCCTTGCTAAGCTT+AGG - chr7_2:60018946-60018965 Msa1066070:intron 40.0%
AGATGGCTAGACATTCACAT+TGG + chr7_2:60019014-60019033 None:intergenic 40.0%
! TGTAAGTTGAGGATCCACAT+TGG + chr7_2:60019098-60019117 None:intergenic 40.0%
AATCCTCTAGCTGTAAGTTG+AGG + chr7_2:60019109-60019128 None:intergenic 40.0%
ACATAGGAACATAACACCGT+GGG + chr7_2:60019181-60019200 None:intergenic 40.0%
CTGCACTTATTGCTACACAT+AGG + chr7_2:60019197-60019216 None:intergenic 40.0%
CTATGTGTAGCAATAAGTGC+AGG - chr7_2:60019195-60019214 Msa1066070:intron 40.0%
GGTGCACAAATGGAACAAAT+TGG - chr7_2:60019290-60019309 Msa1066070:intron 40.0%
AAATTGGATGCAGGGAATGT+GGG - chr7_2:60019306-60019325 Msa1066070:intron 40.0%
! AAGACTTTTTGTGGTGAAGC+GGG + chr7_2:60019423-60019442 None:intergenic 40.0%
ACGAGAAGCTTAGAAGTGAA+TGG - chr7_2:60019457-60019476 Msa1066070:intron 40.0%
CGAGAAGCTTAGAAGTGAAT+GGG - chr7_2:60019458-60019477 Msa1066070:intron 40.0%
ATATGCATACACTAGCTCGT+AGG + chr7_2:60019563-60019582 None:intergenic 40.0%
TTCCTTAACCATTGTCCTGA+AGG + chr7_2:60019975-60019994 None:intergenic 40.0%
!! TTGTTTTGTCGCGTAGTCAT+TGG - chr7_2:60020292-60020311 Msa1066070:intron 40.0%
AAGGTGAAATTGAGAAGGAC+AGG - chr7_2:60020320-60020339 Msa1066070:intron 40.0%
AGGTGAAATTGAGAAGGACA+GGG - chr7_2:60020321-60020340 Msa1066070:intron 40.0%
ATGCATGTAGTAATGAACGG+CGG - chr7_2:60020916-60020935 Msa1066070:CDS 40.0%
GAAGGCTATTCACAAGTATC+TGG + chr7_2:60021071-60021090 None:intergenic 40.0%
CGTGATTGTTAGAGCAAGAT+CGG - chr7_2:60021290-60021309 Msa1066070:five_prime_UTR 40.0%
GGTTGTGAGATTGCACTAGA+AGG + chr7_2:60014333-60014352 None:intergenic 45.0%
GAACATGAAAGCTGCAGATC+TGG - chr7_2:60014620-60014639 Msa1066070:CDS 45.0%
! TGAACTTGCTTTGGCTGCAA+TGG - chr7_2:60015638-60015657 Msa1066070:intron 45.0%
! TCTGAGGCTTCTAGAGAAAG+TGG - chr7_2:60015801-60015820 Msa1066070:intron 45.0%
GAGCTTCTTGCAATCACACA+AGG + chr7_2:60016404-60016423 None:intergenic 45.0%
! CAGTTGTAGAGCACCATTTC+TGG + chr7_2:60016462-60016481 None:intergenic 45.0%
CAGAAATGGTGCTCTACAAC+TGG - chr7_2:60016460-60016479 Msa1066070:CDS 45.0%
AGAAAACTCACCTCACGAAC+AGG + chr7_2:60016663-60016682 None:intergenic 45.0%
! TTTTGCAAGCAGCATGCAGA+AGG - chr7_2:60016687-60016706 Msa1066070:intron 45.0%
TTTGCAAGCAGCATGCAGAA+GGG - chr7_2:60016688-60016707 Msa1066070:intron 45.0%
TCTTGAACCACACAACCAGA+AGG + chr7_2:60016798-60016817 None:intergenic 45.0%
AGGGGGAAAACACAAAGCTA+AGG - chr7_2:60017375-60017394 Msa1066070:intron 45.0%
TAGAACCACTCTCTCAGTGA+TGG - chr7_2:60017483-60017502 Msa1066070:intron 45.0%
GTAATGTTAACCGGTGCTTC+CGG + chr7_2:60017683-60017702 None:intergenic 45.0%
TCAAATATGCAACCTGGGCT+AGG - chr7_2:60017721-60017740 Msa1066070:intron 45.0%
GAACAACCTGCATGAGAGAT+TGG + chr7_2:60017974-60017993 None:intergenic 45.0%
GTACTTGCTCGATCTCCATA+AGG - chr7_2:60018267-60018286 Msa1066070:intron 45.0%
GTCTATAGAGCTGGTGAACT+TGG + chr7_2:60018933-60018952 None:intergenic 45.0%
TTAGCAAGGGTCTATAGAGC+TGG + chr7_2:60018942-60018961 None:intergenic 45.0%
! CTAAGCTTAGGCATGGGTTT+TGG - chr7_2:60018958-60018977 Msa1066070:intron 45.0%
! ACATTCACATTGGCGTTGGA+GGG + chr7_2:60019004-60019023 None:intergenic 45.0%
CTAGACATTCACATTGGCGT+TGG + chr7_2:60019008-60019027 None:intergenic 45.0%
TATACCCGAGTGTTCTCTAG+CGG + chr7_2:60019055-60019074 None:intergenic 45.0%
! CATTGGTACGTGTGGATTGA+TGG + chr7_2:60019081-60019100 None:intergenic 45.0%
TCAATCCACACGTACCAATG+TGG - chr7_2:60019081-60019100 Msa1066070:CDS 45.0%
GATCCTCAACTTACAGCTAG+AGG - chr7_2:60019103-60019122 Msa1066070:CDS 45.0%
! CATAACACCGTGGGTTATTG+TGG + chr7_2:60019172-60019191 None:intergenic 45.0%
CACATAGGAACATAACACCG+TGG + chr7_2:60019182-60019201 None:intergenic 45.0%
TGTGTAGCAATAAGTGCAGG+AGG - chr7_2:60019198-60019217 Msa1066070:intron 45.0%
TAGCAATAAGTGCAGGAGGA+AGG - chr7_2:60019202-60019221 Msa1066070:intron 45.0%
CAAATTGGATGCAGGGAATG+TGG - chr7_2:60019305-60019324 Msa1066070:intron 45.0%
AGGACGTTAGGGTAATGACA+AGG - chr7_2:60019331-60019350 Msa1066070:intron 45.0%
GGTAATGACAAGGAAGAGTG+TGG - chr7_2:60019341-60019360 Msa1066070:intron 45.0%
! AAGGAAGAGTGTGGATGATC+CGG - chr7_2:60019350-60019369 Msa1066070:intron 45.0%
TTAGTGCAGCAACCTCAGTT+TGG - chr7_2:60019394-60019413 Msa1066070:intron 45.0%
TTCTAAGCTTCTCGTTGCGA+AGG + chr7_2:60019452-60019471 None:intergenic 45.0%
GAATGGGACATACTCTCCAA+TGG - chr7_2:60019474-60019493 Msa1066070:intron 45.0%
ATTGCCAAAGGACATGACCA+TGG - chr7_2:60019522-60019541 Msa1066070:intron 45.0%
TCTTGCTAACTAGTGCCTTC+AGG - chr7_2:60019957-60019976 Msa1066070:CDS 45.0%
AACTAGTGCCTTCAGGACAA+TGG - chr7_2:60019964-60019983 Msa1066070:CDS 45.0%
TGCCTTCAGGACAATGGTTA+AGG - chr7_2:60019970-60019989 Msa1066070:CDS 45.0%
TCATCTTAACCAATGCCCCA+AGG - chr7_2:60020096-60020115 Msa1066070:CDS 45.0%
AAATAGTGTCCTTGGGGCAT+TGG + chr7_2:60020108-60020127 None:intergenic 45.0%
CGCGTAGTCATTGGATGAAA+AGG - chr7_2:60020301-60020320 Msa1066070:intron 45.0%
AGAAACAAGCACAGACGCAT+CGG - chr7_2:60020855-60020874 Msa1066070:CDS 45.0%
TGCATTGCGGGAATATCTAC+CGG + chr7_2:60020901-60020920 None:intergenic 45.0%
TTATGTTGCGCTTCTTCCGT+CGG - chr7_2:60020948-60020967 Msa1066070:CDS 45.0%
GCTATGTCCATCTGGTAACA+CGG + chr7_2:60020980-60020999 None:intergenic 45.0%
TTACCAGATGGACATAGCGA+CGG - chr7_2:60020982-60021001 Msa1066070:CDS 45.0%
!! AGCGAGTGGATCACTTTTGA+CGG - chr7_2:60021038-60021057 Msa1066070:intron 45.0%
ACTTGTGAATAGCCTTCCGA+CGG - chr7_2:60021074-60021093 Msa1066070:intron 45.0%
ACCACCATTATCACGACTTC+TGG - chr7_2:60021316-60021335 Msa1066070:five_prime_UTR 45.0%
!! TCCAGAAGTCGTGATAATGG+TGG + chr7_2:60021320-60021339 None:intergenic 45.0%
!! AACAAATTAATTATTTAAAA+GGG + chr7_2:60017892-60017911 None:intergenic 5.0%
!! ATTAAAATAATATTCTTATA+GGG + chr7_2:60017996-60018015 None:intergenic 5.0%
!! AATTAAAATAATATTCTTAT+AGG + chr7_2:60017997-60018016 None:intergenic 5.0%
GACCGAGTTTGTACACTTGC+CGG - chr7_2:60015405-60015424 Msa1066070:intron 50.0%
TGCCGGCAAGTGTACAAACT+CGG + chr7_2:60015410-60015429 None:intergenic 50.0%
ACACTTGCCGGCAAGTTTCT+AGG - chr7_2:60015417-60015436 Msa1066070:intron 50.0%
!! TCCATTGGTTCCTGTTCGTG+AGG - chr7_2:60016650-60016669 Msa1066070:intron 50.0%
ACCTCACGAACAGGAACCAA+TGG + chr7_2:60016654-60016673 None:intergenic 50.0%
TTGCAAGCAGCATGCAGAAG+GGG - chr7_2:60016689-60016708 Msa1066070:intron 50.0%
ACCATCAGAGAAGCTTCAGC+TGG - chr7_2:60016741-60016760 Msa1066070:intron 50.0%
ACCAGCTGAAGCTTCTCTGA+TGG + chr7_2:60016745-60016764 None:intergenic 50.0%
AACTGTAGGAGGCTTCCTTC+TGG - chr7_2:60016780-60016799 Msa1066070:intron 50.0%
AACCAGTGTCCGGAGAACAT+CGG + chr7_2:60017545-60017564 None:intergenic 50.0%
! TGTTCTCCGGACACTGGTTA+AGG - chr7_2:60017546-60017565 Msa1066070:intron 50.0%
! AACCAATGATCCGGAAGCAC+CGG - chr7_2:60017670-60017689 Msa1066070:intron 50.0%
! GTTGACTCAACGACAGACCA+AGG + chr7_2:60018299-60018318 None:intergenic 50.0%
TGTCGTTGAGTCAACTTGCC+AGG - chr7_2:60018304-60018323 Msa1066070:intron 50.0%
TATGATGCAGGTGACATGGG+TGG - chr7_2:60018885-60018904 Msa1066070:intron 50.0%
GGTGGAGCATGCAGAATATG+AGG - chr7_2:60018903-60018922 Msa1066070:intron 50.0%
ACCCTTGCTAAGCTTAGGCA+TGG - chr7_2:60018951-60018970 Msa1066070:intron 50.0%
CCCATGCCTAAGCTTAGCAA+GGG + chr7_2:60018955-60018974 None:intergenic 50.0%
CCCTTGCTAAGCTTAGGCAT+GGG - chr7_2:60018952-60018971 Msa1066070:intron 50.0%
ACCCATGCCTAAGCTTAGCA+AGG + chr7_2:60018956-60018975 None:intergenic 50.0%
! GACATTCACATTGGCGTTGG+AGG + chr7_2:60019005-60019024 None:intergenic 50.0%
ATACCCGAGTGTTCTCTAGC+GGG + chr7_2:60019054-60019073 None:intergenic 50.0%
AGGATCCACATTGGTACGTG+TGG + chr7_2:60019089-60019108 None:intergenic 50.0%
TGCTGGAGTTTGTGCATCGA+CGG - chr7_2:60019269-60019288 Msa1066070:intron 50.0%
! AGGAAGAGTGTGGATGATCC+GGG - chr7_2:60019351-60019370 Msa1066070:intron 50.0%
TGGGACATACTCTCCAATGG+TGG - chr7_2:60019477-60019496 Msa1066070:intron 50.0%
ATGTGAGCCATCTCTCGCAT+TGG + chr7_2:60019504-60019523 None:intergenic 50.0%
GAGATGGCTCACATTGCCAA+AGG - chr7_2:60019510-60019529 Msa1066070:intron 50.0%
GTTGCCATGGTCATGTCCTT+TGG + chr7_2:60019529-60019548 None:intergenic 50.0%
GCATACACTAGCTCGTAGGA+GGG + chr7_2:60019559-60019578 None:intergenic 50.0%
TGCATACACTAGCTCGTAGG+AGG + chr7_2:60019560-60019579 None:intergenic 50.0%
GAAACAAGCACAGACGCATC+GGG - chr7_2:60020856-60020875 Msa1066070:CDS 50.0%
AAACAAGCACAGACGCATCG+GGG - chr7_2:60020857-60020876 Msa1066070:CDS 50.0%
TATGTTGCGCTTCTTCCGTC+GGG - chr7_2:60020949-60020968 Msa1066070:CDS 50.0%
TACCAGATGGACATAGCGAC+GGG - chr7_2:60020983-60021002 Msa1066070:CDS 50.0%
AAAGCTCACGGTGGAATCAG+TGG - chr7_2:60021098-60021117 Msa1066070:intron 50.0%
CACGGTGGAATCAGTGGAAA+CGG - chr7_2:60021104-60021123 Msa1066070:intron 50.0%
TGGACGGCCTAGAAACTTGC+CGG + chr7_2:60015427-60015446 None:intergenic 55.0%
AGCAGCATGCAGAAGGGGTA+TGG - chr7_2:60016694-60016713 Msa1066070:intron 55.0%
! GCAGCATGCAGAAGGGGTAT+GGG - chr7_2:60016695-60016714 Msa1066070:intron 55.0%
! GAGGCTTCCTTCTGGTTGTG+TGG - chr7_2:60016788-60016807 Msa1066070:intron 55.0%
GGGAACCATCACTGAGAGAG+TGG + chr7_2:60017491-60017510 None:intergenic 55.0%
AACCGATGTTCTCCGGACAC+TGG - chr7_2:60017540-60017559 Msa1066070:intron 55.0%
AACCGGTGCTTCCGGATCAT+TGG + chr7_2:60017675-60017694 None:intergenic 55.0%
!! TGGGTTTTGGCGCACAACGT+TGG - chr7_2:60018971-60018990 Msa1066070:intron 55.0%
!! GGGTTTTGGCGCACAACGTT+GGG - chr7_2:60018972-60018991 Msa1066070:intron 55.0%
ACTCCCCGCTAGAGAACACT+CGG - chr7_2:60019047-60019066 Msa1066070:CDS 55.0%
TACCCGAGTGTTCTCTAGCG+GGG + chr7_2:60019053-60019072 None:intergenic 55.0%
! GTGCATCGACGGTGCACAAA+TGG - chr7_2:60019280-60019299 Msa1066070:intron 55.0%
GAATGTGGGCGAGGACGTTA+GGG - chr7_2:60019320-60019339 Msa1066070:intron 55.0%
GCTGCACTAAGCACAATCCC+CGG + chr7_2:60019384-60019403 None:intergenic 55.0%
TGAAGCGGGTAGCCAAACTG+AGG + chr7_2:60019409-60019428 None:intergenic 55.0%
CTCTCGCATTGGACCACCAT+TGG + chr7_2:60019493-60019512 None:intergenic 55.0%
TGGTGGTCCAATGCGAGAGA+TGG - chr7_2:60019494-60019513 Msa1066070:intron 55.0%
GGTTTCGCCGTGTTACCAGA+TGG - chr7_2:60020970-60020989 Msa1066070:CDS 55.0%
ATCACGATGACGAGTCGCAG+CGG - chr7_2:60021013-60021032 Msa1066070:intron 55.0%
! TGCAGAAGGGGTATGGGCAG+TGG - chr7_2:60016701-60016720 Msa1066070:intron 60.0%
!! GAGAGGAAGCATCCTAGCCC+AGG + chr7_2:60017736-60017755 None:intergenic 60.0%
CTCCCCGCTAGAGAACACTC+GGG - chr7_2:60019048-60019067 Msa1066070:CDS 60.0%
GGAATGTGGGCGAGGACGTT+AGG - chr7_2:60019319-60019338 Msa1066070:intron 60.0%
GCACTAAGCACAATCCCCGG+TGG + chr7_2:60019381-60019400 None:intergenic 60.0%
GGAGGGAGACACAGTTGCCA+TGG + chr7_2:60019542-60019561 None:intergenic 60.0%
!! GTCGCTTGTTGTGTACGCGC+CGG - chr7_2:60020879-60020898 Msa1066070:CDS 60.0%
GGTAACACGGCGAAACCCGA+CGG + chr7_2:60020967-60020986 None:intergenic 60.0%
CTCCCGTCGCTATGTCCATC+TGG + chr7_2:60020988-60021007 None:intergenic 60.0%
GATGGACATAGCGACGGGAG+TGG - chr7_2:60020988-60021007 Msa1066070:intron 60.0%
CCTTCCGACGGCAAAGCTCA+CGG - chr7_2:60021086-60021105 Msa1066070:intron 60.0%
TCCACCGTGAGCTTTGCCGT+CGG + chr7_2:60021093-60021112 None:intergenic 60.0%
GGATGCAGGGAATGTGGGCG+AGG - chr7_2:60019311-60019330 Msa1066070:intron 65.0%
GGATGATCCGGGTGAGCCAC+CGG - chr7_2:60019362-60019381 Msa1066070:intron 65.0%
GATGATCCGGGTGAGCCACC+GGG - chr7_2:60019363-60019382 Msa1066070:intron 65.0%
ATGATCCGGGTGAGCCACCG+GGG - chr7_2:60019364-60019383 Msa1066070:intron 65.0%
ACAATCCCCGGTGGCTCACC+CGG + chr7_2:60019372-60019391 None:intergenic 65.0%
CCGTGAGCTTTGCCGTCGGA+AGG + chr7_2:60021089-60021108 None:intergenic 65.0%
TCCGACGGCAAAGCTCACGG+TGG - chr7_2:60021089-60021108 Msa1066070:intron 65.0%
GAGTCGCAGCGGAGAGCGAG+TGG - chr7_2:60021024-60021043 Msa1066070:intron 70.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 60014141 60021382 60014141 ID=Msa1066070;Name=Msa1066070
chr7_2 mRNA 60014141 60021382 60014141 ID=Msa1066070-mRNA-1;Parent=Msa1066070;Name=Msa1066070-mRNA-1;_AED=0.12;_eAED=0.12;_QI=186|1|1|1|1|1|9|194|777
chr7_2 exon 60014141 60014706 60014141 ID=Msa1066070-mRNA-1:exon:11678;Parent=Msa1066070-mRNA-1
chr7_2 exon 60015951 60016318 60015951 ID=Msa1066070-mRNA-1:exon:11677;Parent=Msa1066070-mRNA-1
chr7_2 exon 60016454 60016628 60016454 ID=Msa1066070-mRNA-1:exon:11676;Parent=Msa1066070-mRNA-1
chr7_2 exon 60018684 60018899 60018684 ID=Msa1066070-mRNA-1:exon:11675;Parent=Msa1066070-mRNA-1
chr7_2 exon 60019042 60019143 60019042 ID=Msa1066070-mRNA-1:exon:11674;Parent=Msa1066070-mRNA-1
chr7_2 exon 60019651 60020310 60019651 ID=Msa1066070-mRNA-1:exon:11673;Parent=Msa1066070-mRNA-1
chr7_2 exon 60020557 60020674 60020557 ID=Msa1066070-mRNA-1:exon:11672;Parent=Msa1066070-mRNA-1
chr7_2 exon 60020770 60021002 60020770 ID=Msa1066070-mRNA-1:exon:11671;Parent=Msa1066070-mRNA-1
chr7_2 exon 60021107 60021382 60021107 ID=Msa1066070-mRNA-1:exon:11670;Parent=Msa1066070-mRNA-1
chr7_2 five_prime_UTR 60021197 60021382 60021197 ID=Msa1066070-mRNA-1:five_prime_utr;Parent=Msa1066070-mRNA-1
chr7_2 CDS 60021107 60021196 60021107 ID=Msa1066070-mRNA-1:cds;Parent=Msa1066070-mRNA-1
chr7_2 CDS 60020770 60021002 60020770 ID=Msa1066070-mRNA-1:cds;Parent=Msa1066070-mRNA-1
chr7_2 CDS 60020557 60020674 60020557 ID=Msa1066070-mRNA-1:cds;Parent=Msa1066070-mRNA-1
chr7_2 CDS 60019651 60020310 60019651 ID=Msa1066070-mRNA-1:cds;Parent=Msa1066070-mRNA-1
chr7_2 CDS 60019042 60019143 60019042 ID=Msa1066070-mRNA-1:cds;Parent=Msa1066070-mRNA-1
chr7_2 CDS 60018684 60018899 60018684 ID=Msa1066070-mRNA-1:cds;Parent=Msa1066070-mRNA-1
chr7_2 CDS 60016454 60016628 60016454 ID=Msa1066070-mRNA-1:cds;Parent=Msa1066070-mRNA-1
chr7_2 CDS 60015951 60016318 60015951 ID=Msa1066070-mRNA-1:cds;Parent=Msa1066070-mRNA-1
chr7_2 CDS 60014335 60014706 60014335 ID=Msa1066070-mRNA-1:cds;Parent=Msa1066070-mRNA-1
chr7_2 three_prime_UTR 60014141 60014334 60014141 ID=Msa1066070-mRNA-1:three_prime_utr;Parent=Msa1066070-mRNA-1
Gene Sequence

>Msa1066070

ATGCCTTCTAGTGCAATCTCACAACCTCGTTTATCAACTCCTACTTTGATTAAATCCATGTTCAACTCATCTAGTCTATCTTTAGCACTTCAAACAAATATAGAAGCACATGGTGGTGATATGAAGAGATTAATGGCTGAGAATTTTCATCAAACAAACAATGGTTTGAGAAGGAATAGAGAAGAAGAAGAACATGAAAGCTGCAGATCTGGTAGTGATAACATGGATGGTATTTCTGGTGATGATATTGATGCTGCCGACAATCCGCCAAGAAAAAAACGTTATCACCGACACACTCCTCAACAAATTCAAGAACTTGAATCGATGTTTAAAGAGTGTCCTCATCCTGATGAAAAACAAAGACTTGAACTTAGCAAAAGGCTTTGTTTGGAAACAAGACAAGTCAAGTTTTGGTTCCAAAATAGAAGAACACAAATGAAGACTCAATTGGAACGTCACGAGAATTCACTACTTAGGCAAGCAAATGATAAATTAAGAGCTGAGAACATGTCAATAAGAGAAGCAATGAGGAATCCAATGTGTTCAAATTGTGGAGGACCAGCAATTATTAGTGAAATTTCACTTGAAGAACAACATCTAAGAATTGAGAATGCAAGATTAAAAGATGAATTAGACCGAGTTTGTACACTTGCCGGCAAGTTTCTAGGCCGTCCAATTACGTTACCAAACTCGAGTTTAGAAATTGGTTTTAATGGTTTGAACAATACTTTGCCTTCAACAATGCCTTTAGGTCAAGATTTTGGCATGGTGTCAATGTCACCACCTTCAATTACAAGAGGAACAAATATGGTAACAAATACTAATAGTAATGGTTTTGATAGATCAATGGAAAGGTCTATGTTTCTTGAACTTGCTTTGGCTGCAATGGATGAGTTAGTGAAGATGGCACAAACTAATGAGCCTCTTTGGATTAGAAGTGTTGAAGGTGGAAAAGAAATTCTTAATCATGAGGAATATACAAGGATTATTAGTACTCCTTGTATTGGTTTGAAACCAAATGGTTTTGTTTCTGAGGCTTCTAGAGAAAGTGGTGTTGTTATCATAAACAGCTTGGCTCTTGTTGAAACTTTAATGGATTCAAATCGATGGTCAGAGATGTTCCCTTGTGTGATTGCAAGAAGCTCCACAACTGAAGTGATATCCAGTGGAATAAATGGAACCAGAAATGGTGCTCTACAACTGATGCAAGCTGAACTTCAAGTACTTTCTCCATTGGTTCCTGTTCGTGAGGTGAGTTTTCTAAGGTTTTGCAAGCAGCATGCAGAAGGGGTATGGGCAGTGGTTGATGTGTCCATAGATACCATCAGAGAAGCTTCAGCTGGTGCACCCACTTTTCTTAACTGTAGGAGGCTTCCTTCTGGTTGTGTGGTTCAAGATATGCCAAATGGTTACTCTAAGGTGACATGGGTGGAGCATGCAGAATATGAGGAAAGCCAAGTTCACCAGCTCTATAGACCCTTGCTAAGCTTAGGCATGGGTTTTGGCGCACAACGTTGGGTTGCAACCCTCCAACGCCAATGTGAATGTCTAGCCATCTTAATGTCATCATCACTCCCCGCTAGAGAACACTCGGCAATAAGTGCAGGAGGAAGGCGTAGCATGCTAAAGCTAGCGCACCGAATGACAAACAACTTTTGTGCTGGAGTTTGTGCATCGACGGTGCACAAATGGAACAAATTGGATGCAGGGAATGTGGGCGAGGACGTTAGGGTAATGACAAGGAAGAGTGTGGATGATCCGGGTGAGCCACCGGGGATTGTGCTTAGTGCAGCAACCTCAGTTTGGCTACCCGCTTCACCACAAAAAGTCTTTGATTTCCTTCGCAACGAGAAGCTTAGAAGTGAATGGGACATACTCTCCAATGGTGGTCCAATGCGAGAGATGGCTCACATTGCCAAAGGACATGACCATGGCAACTGTGTCTCCCTCCTACGAGCTAGTGCTATTAATTCAAGTCAAAGTAGCATGTTGATTCTACAAGAAACAAGCACAGACGCATCGGGGTCGCTTGTTGTGTACGCGCCGGTAGATATTCCCGCAATGCATGTAGTAATGAACGGCGGCGATTCAGCTTATGTTGCGCTTCTTCCGTCGGGTTTCGCCGTGTTACCAGATGGACATAGCGACGGGAGTGGTAATCACGATGACGAGTCGCAGCGGAGAGCGAGTGGATCACTTTTGACGGTAGCATTCCAGATACTTGTGAATAGCCTTCCGACGGCAAAGCTCACGGTGGAATCAGTGGAAACGGTGAACAATCTCATTTCATGTACTATTCAAAAGATAAAAGTAGCACTTCAATGTGAGAGTTAA
Protein sequence

>Msa1066070

MPSSAISQPRLSTPTLIKSMFNSSSLSLALQTNIEAHGGDMKRLMAENFHQTNNGLRRNREEEEHESCRSGSDNMDGISGDDIDAADNPPRKKRYHRHTPQQIQELESMFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQANDKLRAENMSIREAMRNPMCSNCGGPAIISEISLEEQHLRIENARLKDELDRVCTLAGKFLGRPITLPNSSLEIGFNGLNNTLPSTMPLGQDFGMVSMSPPSITRGTNMVTNTNSNGFDRSMERSMFLELALAAMDELVKMAQTNEPLWIRSVEGGKEILNHEEYTRIISTPCIGLKPNGFVSEASRESGVVIINSLALVETLMDSNRWSEMFPCVIARSSTTEVISSGINGTRNGALQLMQAELQVLSPLVPVREVSFLRFCKQHAEGVWAVVDVSIDTIREASAGAPTFLNCRRLPSGCVVQDMPNGYSKVTWVEHAEYEESQVHQLYRPLLSLGMGFGAQRWVATLQRQCECLAILMSSSLPAREHSAISAGGRRSMLKLAHRMTNNFCAGVCASTVHKWNKLDAGNVGEDVRVMTRKSVDDPGEPPGIVLSAATSVWLPASPQKVFDFLRNEKLRSEWDILSNGGPMREMAHIAKGHDHGNCVSLLRASAINSSQSSMLILQETSTDASGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFAVLPDGHSDGSGNHDDESQRRASGSLLTVAFQILVNSLPTAKLTVESVETVNNLISCTIQKIKVALQCES*