Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0490200 | XP_024635150.1 | 98.087 | 366 | 7 | 0 | 1 | 366 | 1 | 366 | 0.0 | 736 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0490200 | sp|Q9M2V1|NCA1_ARATH | 66.393 | 366 | 107 | 2 | 5 | 354 | 31 | 396 | 4.50e-174 | 493 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0490200 | A0A072UTH6 | 98.087 | 366 | 7 | 0 | 1 | 366 | 1 | 366 | 0.0 | 736 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0042210 | Msa0490200 | 0.815225 | 1.030927e-51 | -8.615850e-47 |
| Msa0061130 | Msa0490200 | 0.812872 | 3.406263e-51 | -8.615850e-47 |
| Msa0070580 | Msa0490200 | 0.816171 | 6.345413e-52 | -8.615850e-47 |
| Msa0078170 | Msa0490200 | 0.810437 | 1.153359e-50 | -8.615850e-47 |
| Msa0086370 | Msa0490200 | -0.801654 | 8.129536e-49 | -8.615850e-47 |
| Msa0123680 | Msa0490200 | 0.803625 | 3.187979e-49 | -8.615850e-47 |
| Msa0130360 | Msa0490200 | -0.804284 | 2.325434e-49 | -8.615850e-47 |
| Msa0136090 | Msa0490200 | -0.815242 | 1.021791e-51 | -8.615850e-47 |
| Msa0168470 | Msa0490200 | 0.820774 | 5.741680e-53 | -8.615850e-47 |
| Msa0185540 | Msa0490200 | 0.801176 | 1.018799e-48 | -8.615850e-47 |
| Msa0213590 | Msa0490200 | 0.817487 | 3.214743e-52 | -8.615850e-47 |
| Msa0369580 | Msa0490200 | 0.803435 | 3.490483e-49 | -8.615850e-47 |
| Msa0417000 | Msa0490200 | 0.814400 | 1.570614e-51 | -8.615850e-47 |
| Msa0424940 | Msa0490200 | 0.811240 | 7.728595e-51 | -8.615850e-47 |
| Msa0430040 | Msa0490200 | 0.805472 | 1.313250e-49 | -8.615850e-47 |
| Msa0463820 | Msa0490200 | 0.824507 | 7.774205e-54 | -8.615850e-47 |
| Msa0474670 | Msa0490200 | 0.803875 | 2.829301e-49 | -8.615850e-47 |
| Msa0476140 | Msa0490200 | 0.812638 | 3.833636e-51 | -8.615850e-47 |
| Msa0238960 | Msa0490200 | 0.800240 | 1.581349e-48 | -8.615850e-47 |
| Msa0264230 | Msa0490200 | -0.815531 | 8.815806e-52 | -8.615850e-47 |
| Msa0293000 | Msa0490200 | 0.852014 | 6.095622e-61 | -8.615850e-47 |
| Msa0331060 | Msa0490200 | 0.823298 | 1.493108e-53 | -8.615850e-47 |
| Msa0336430 | Msa0490200 | -0.820924 | 5.305046e-53 | -8.615850e-47 |
| Msa0336520 | Msa0490200 | -0.817498 | 3.196619e-52 | -8.615850e-47 |
| Msa0355990 | Msa0490200 | 0.800084 | 1.701344e-48 | -8.615850e-47 |
| Msa0484590 | Msa0490200 | 0.815458 | 9.149977e-52 | -8.615850e-47 |
| Msa0490200 | Msa0490740 | 0.825053 | 5.781960e-54 | -8.615850e-47 |
| Msa0490200 | Msa0524080 | 0.813683 | 2.261138e-51 | -8.615850e-47 |
| Msa0490200 | Msa0557850 | -0.806120 | 9.595770e-50 | -8.615850e-47 |
| Msa0490200 | Msa0603600 | 0.820420 | 6.924175e-53 | -8.615850e-47 |
| Msa0490200 | Msa0606230 | 0.809943 | 1.473811e-50 | -8.615850e-47 |
| Msa0490200 | Msa0612090 | 0.818005 | 2.456662e-52 | -8.615850e-47 |
| Msa0490200 | Msa0624260 | 0.840663 | 7.591626e-58 | -8.615850e-47 |
| Msa0490200 | Msa0624360 | 0.836385 | 9.653653e-57 | -8.615850e-47 |
| Msa0490200 | Msa0667840 | 0.810716 | 1.003957e-50 | -8.615850e-47 |
| Msa0490200 | Msa0673620 | 0.800036 | 1.739886e-48 | -8.615850e-47 |
| Msa0490200 | Msa0681100 | 0.811295 | 7.518548e-51 | -8.615850e-47 |
| Msa0490200 | Msa0708020 | -0.802541 | 5.341792e-49 | -8.615850e-47 |
| Msa0490200 | Msa0714230 | 0.812704 | 3.707707e-51 | -8.615850e-47 |
| Msa0490200 | Msa0797950 | -0.824548 | 7.602551e-54 | -8.615850e-47 |
| Msa0490200 | Msa0799150 | 0.823255 | 1.528405e-53 | -8.615850e-47 |
| Msa0490200 | Msa0930950 | 0.832365 | 9.856235e-56 | -8.615850e-47 |
| Msa0490200 | Msa0974410 | 0.809413 | 1.915373e-50 | -8.615850e-47 |
| Msa0490200 | Msa0978980 | -0.821434 | 4.046298e-53 | -8.615850e-47 |
| Msa0490200 | Msa1030950 | 0.802273 | 6.067227e-49 | -8.615850e-47 |
| Msa0490200 | Msa1057320 | 0.843623 | 1.250206e-58 | -8.615850e-47 |
| Msa0490200 | Msa1057340 | 0.862752 | 4.056553e-64 | -8.615850e-47 |
| Msa0490200 | Msa1066950 | 0.803903 | 2.792043e-49 | -8.615850e-47 |
| Msa0490200 | Msa1082640 | 0.863825 | 1.887814e-64 | -8.615850e-47 |
| Msa0490200 | Msa1148100 | 0.815235 | 1.025492e-51 | -8.615850e-47 |
| Msa0490200 | Msa1190300 | 0.837123 | 6.257193e-57 | -8.615850e-47 |
| Msa0490200 | Msa1190320 | 0.806560 | 7.753426e-50 | -8.615850e-47 |
| Msa0490200 | Msa1196910 | 0.817179 | 3.771125e-52 | -8.615850e-47 |
| Msa0490200 | Msa1202220 | 0.836287 | 1.022306e-56 | -8.615850e-47 |
| Msa0490200 | Msa1211320 | -0.808752 | 2.653326e-50 | -8.615850e-47 |
| Msa0490200 | Msa1222900 | 0.800304 | 1.534343e-48 | -8.615850e-47 |
| Msa0490200 | Msa1223440 | -0.806894 | 6.591280e-50 | -8.615850e-47 |
| Msa0490200 | Msa1231440 | -0.808896 | 2.472832e-50 | -8.615850e-47 |
| Msa0490200 | Msa1270850 | 0.803827 | 2.895023e-49 | -8.615850e-47 |
| Msa0490200 | Msa1287100 | 0.810769 | 9.778440e-51 | -8.615850e-47 |
| Msa0490200 | Msa1288970 | 0.801032 | 1.090097e-48 | -8.615850e-47 |
| Msa0490200 | Msa1330080 | 0.802486 | 5.484628e-49 | -8.615850e-47 |
| Msa0490200 | Msa1335200 | 0.800954 | 1.131129e-48 | -8.615850e-47 |
| Msa0490200 | Msa1344080 | 0.815331 | 9.765928e-52 | -8.615850e-47 |
| Msa0490200 | Msa1349850 | 0.832319 | 1.011870e-55 | -8.615850e-47 |
| Msa0490200 | Msa1362590 | -0.802864 | 4.583217e-49 | -8.615850e-47 |
| Msa0490200 | Msa1369400 | 0.808269 | 3.365795e-50 | -8.615850e-47 |
| Msa0490200 | Msa1370270 | 0.807414 | 5.114397e-50 | -8.615850e-47 |
| Msa0490200 | Msa1372030 | -0.817153 | 3.822520e-52 | -8.615850e-47 |
| Msa0490200 | Msa1414000 | 0.814375 | 1.590438e-51 | -8.615850e-47 |
| Msa0490200 | Msa1427600 | 0.820388 | 7.044131e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0490200 | MtrunA17_Chr3g0080821 | 98.087 | 366 | 7 | 0 | 1 | 366 | 1 | 366 | 0.0 | 736 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0490200 | AT3G54360.1 | 66.393 | 366 | 107 | 2 | 5 | 354 | 31 | 396 | 4.58e-175 | 493 |
| Msa0490200 | AT3G54360.2 | 66.393 | 366 | 107 | 2 | 5 | 354 | 31 | 396 | 4.58e-175 | 493 |
Find 109 sgRNAs with CRISPR-Local
Find 355 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAACTCCTTTAGTACCTTAT+TGG | 0.156109 | 3_4:-11636249 | Msa0490200:three_prime_UTR |
| GGCATGTATATTGCGCTTTA+AGG | 0.157277 | 3_4:-11641014 | Msa0490200:CDS |
| TTCAACTTGTTCTTGTTTAT+CGG | 0.174396 | 3_4:+11636542 | None:intergenic |
| AACATCACGGCGAACATTTA+AGG | 0.189458 | 3_4:+11638242 | None:intergenic |
| TCCGTTTCGCTTAATAAAAT+TGG | 0.209504 | 3_4:-11638321 | Msa0490200:CDS |
| GAGAAATACAGTGAATAAAA+AGG | 0.264568 | 3_4:+11636309 | None:intergenic |
| TGGTGACTATTACATGTATT+TGG | 0.268236 | 3_4:-11636007 | Msa0490200:three_prime_UTR |
| TCTCTCCTACTAGAACTTTC+CGG | 0.289488 | 3_4:-11636288 | Msa0490200:three_prime_UTR |
| GTTCTTGTTTATCGGCCTTT+TGG | 0.296831 | 3_4:+11636550 | None:intergenic |
| AAAGTTGCCTAAAGATGATT+TGG | 0.309793 | 3_4:-11638473 | Msa0490200:CDS |
| TTTGGAAAGAGGTTCTTTCT+TGG | 0.311270 | 3_4:-11640822 | Msa0490200:CDS |
| GATTGGTCCTCTTAGTTGTA+TGG | 0.347050 | 3_4:-11641189 | Msa0490200:CDS |
| TAGAGATTCCAGCAAGTCTA+TGG | 0.352338 | 3_4:+11637095 | None:intergenic |
| ACATAGGTTCAGTCTTGATT+TGG | 0.359386 | 3_4:+11640289 | None:intergenic |
| AGGTTCTTTCTTGGTGCAAC+AGG | 0.360238 | 3_4:-11640813 | Msa0490200:CDS |
| TAGTACCTTATTGGTGCATA+AGG | 0.365079 | 3_4:-11636240 | Msa0490200:three_prime_UTR |
| TCAAGAAGCCATAGACTTGC+TGG | 0.365900 | 3_4:-11637103 | Msa0490200:CDS |
| TCAATATCAGCCCCACATAA+TGG | 0.389333 | 3_4:+11640986 | None:intergenic |
| CAATTCAAATGTTTCATCTC+AGG | 0.394732 | 3_4:-11638211 | Msa0490200:intron |
| TTCACAACTTGGAGCAGTCT+TGG | 0.399825 | 3_4:-11640213 | Msa0490200:CDS |
| TGTATACGAGGATGTGTCTT+TGG | 0.408393 | 3_4:-11640840 | Msa0490200:CDS |
| AGAACAAGGCACACATTTGC+TGG | 0.423636 | 3_4:+11641142 | None:intergenic |
| GGTGATCTTAAATATTATGA+TGG | 0.426058 | 3_4:-11638300 | Msa0490200:CDS |
| TGGGTATGCTTGGTGACTGC+TGG | 0.442245 | 3_4:-11640193 | Msa0490200:intron |
| AACATTACCGTCATCCGGAC+GGG | 0.445103 | 3_4:+11641340 | None:intergenic |
| GAGCCCGATGCTGATCTTCA+AGG | 0.446498 | 3_4:-11640956 | Msa0490200:CDS |
| TAAATGTTTCTGTATGCGAT+TGG | 0.452938 | 3_4:-11636456 | Msa0490200:three_prime_UTR |
| CCTTACTTTCATGCTCTACA+TGG | 0.457016 | 3_4:+11641285 | None:intergenic |
| ATAACCTCCAAATCATCTTT+AGG | 0.460092 | 3_4:+11638466 | None:intergenic |
| ACTATAGAATGAGTTCAAGT+TGG | 0.463300 | 3_4:+11636123 | None:intergenic |
| TTAAGGACTGTCCATTATGT+GGG | 0.463879 | 3_4:-11640997 | Msa0490200:CDS |
| CCATGTAGAGCATGAAAGTA+AGG | 0.465700 | 3_4:-11641285 | Msa0490200:CDS |
| TTTAAGGACTGTCCATTATG+TGG | 0.466053 | 3_4:-11640998 | Msa0490200:CDS |
| TGAAAGTAAGGTTAAGAAAG+AGG | 0.469593 | 3_4:-11641273 | Msa0490200:CDS |
| TCACAACTTGGAGCAGTCTT+GGG | 0.474641 | 3_4:-11640212 | Msa0490200:CDS |
| GTAGTTGATCGCTTTATTGA+AGG | 0.475161 | 3_4:-11640932 | Msa0490200:CDS |
| TACTAGAACTTTCCGGTGAC+CGG | 0.478429 | 3_4:-11636281 | Msa0490200:three_prime_UTR |
| GTGATCTTAAATATTATGAT+GGG | 0.479498 | 3_4:-11638299 | Msa0490200:CDS |
| AGTACGACCTTGCAGCTTGA+AGG | 0.480052 | 3_4:+11638274 | None:intergenic |
| GACACATCCTCGTATACAAC+AGG | 0.480682 | 3_4:+11640845 | None:intergenic |
| AGCCAGTGGACTTGAGCAAC+GGG | 0.481590 | 3_4:-11637058 | Msa0490200:intron |
| TCTTGCAAAAGTAGCGGATG+TGG | 0.484863 | 3_4:-11637166 | Msa0490200:CDS |
| GTCTCACCAAAGTGTCCGTT+GGG | 0.490361 | 3_4:-11641233 | Msa0490200:CDS |
| TATCATTTCTAGTCAAAATG+AGG | 0.491303 | 3_4:-11635954 | Msa0490200:three_prime_UTR |
| TCATAACCCAACGGACACTT+TGG | 0.491316 | 3_4:+11641227 | None:intergenic |
| TTAGAAACATTACCGTCATC+CGG | 0.492764 | 3_4:+11641335 | None:intergenic |
| GAGGATGTGTCTTTGGAAAG+AGG | 0.495437 | 3_4:-11640833 | Msa0490200:CDS |
| GTCTTTGTAGGTTCTTGTTG+TGG | 0.496387 | 3_4:-11641403 | Msa0490200:intron |
| TACCCGTTGCTCAAGTCCAC+TGG | 0.497823 | 3_4:+11637056 | None:intergenic |
| AAGGTCATGCCAGGATCAAA+AGG | 0.498126 | 3_4:-11640913 | Msa0490200:CDS |
| GAACAAAGGCATTATAATAG+AGG | 0.499392 | 3_4:-11636407 | Msa0490200:three_prime_UTR |
| TCAGAGTTATGTTCACAACT+TGG | 0.500296 | 3_4:-11640224 | Msa0490200:CDS |
| CAAGTTGAACAAACAATATG+AGG | 0.503148 | 3_4:-11636528 | Msa0490200:exon |
| TCTTAGTTGTATGGTATGCC+AGG | 0.506853 | 3_4:-11641180 | Msa0490200:CDS |
| GTTGCCTAAAGATGATTTGG+AGG | 0.510008 | 3_4:-11638470 | Msa0490200:intron |
| GGAGCAGTCTTGGGTATGCT+TGG | 0.510369 | 3_4:-11640203 | Msa0490200:CDS |
| TATAGAATATTCATAAATGT+TGG | 0.513127 | 3_4:-11636090 | Msa0490200:three_prime_UTR |
| ATGCACCAATAAGGTACTAA+AGG | 0.513642 | 3_4:+11636244 | None:intergenic |
| GCGGATGTGGACAAAAGTCT+AGG | 0.516734 | 3_4:-11637153 | Msa0490200:CDS |
| TGTGTGATGATGCGGTTGGT+TGG | 0.518754 | 3_4:+11642231 | None:intergenic |
| AGACTTCCTTAGAAGCCAAA+AGG | 0.521354 | 3_4:-11636565 | Msa0490200:CDS |
| TTGTGATCCTCTCCGGTCAC+CGG | 0.522149 | 3_4:+11636269 | None:intergenic |
| CACTTTCTAAATTCTGAGCA+CGG | 0.525130 | 3_4:+11640312 | None:intergenic |
| AAAATTCCCCGTCCGGATGA+CGG | 0.525530 | 3_4:-11641347 | Msa0490200:CDS |
| CGGATGTGGACAAAAGTCTA+GGG | 0.527420 | 3_4:-11637152 | Msa0490200:CDS |
| ATTCAGAGTGATGGATATCT+CGG | 0.530218 | 3_4:-11636368 | Msa0490200:three_prime_UTR |
| TGTCTCACCAAAGTGTCCGT+TGG | 0.532045 | 3_4:-11641234 | Msa0490200:CDS |
| AAAGGAGTTGTGATCCTCTC+CGG | 0.537504 | 3_4:+11636262 | None:intergenic |
| ATACACGCCTTGCTAGCAAA+AGG | 0.544777 | 3_4:-11636501 | Msa0490200:three_prime_UTR |
| ACACCTTGAAGATCAGCATC+GGG | 0.547362 | 3_4:+11640953 | None:intergenic |
| AACTGCTATCACCCATTGCT+CGG | 0.561570 | 3_4:+11638536 | None:intergenic |
| GATGAAAAGTCCGCTAGTGA+TGG | 0.561875 | 3_4:-11637129 | Msa0490200:CDS |
| TGTTCGCAGTCAGATAGAAA+AGG | 0.565529 | 3_4:-11640258 | Msa0490200:CDS |
| TCATGTGTAAAATAAAGCTC+AGG | 0.568004 | 3_4:-11636431 | Msa0490200:three_prime_UTR |
| TGGCATACCATACAACTAAG+AGG | 0.568439 | 3_4:+11641182 | None:intergenic |
| GGATTGTGTGATGATGCGGT+TGG | 0.572386 | 3_4:+11642227 | None:intergenic |
| AAACATTACCGTCATCCGGA+CGG | 0.573654 | 3_4:+11641339 | None:intergenic |
| GGTCACCGGAAAGTTCTAGT+AGG | 0.577461 | 3_4:+11636283 | None:intergenic |
| AGGTCTGTTAATTTAGACAA+TGG | 0.578810 | 3_4:-11640893 | Msa0490200:CDS |
| TACACCTTGAAGATCAGCAT+CGG | 0.579839 | 3_4:+11640952 | None:intergenic |
| CTTGGTGCAACAGGCCATGA+GGG | 0.579935 | 3_4:-11640804 | Msa0490200:intron |
| CGTTTCTCTTGCAAAAGTAG+CGG | 0.580560 | 3_4:-11637172 | Msa0490200:CDS |
| ACATTACCGTCATCCGGACG+GGG | 0.582050 | 3_4:+11641341 | None:intergenic |
| GCTTTATTGAAGGTCATGCC+AGG | 0.582251 | 3_4:-11640922 | Msa0490200:CDS |
| TTGCAGAAAACGTGAGAACA+AGG | 0.583502 | 3_4:+11641128 | None:intergenic |
| TTGTGGATTGTGTGATGATG+CGG | 0.585635 | 3_4:+11642223 | None:intergenic |
| AAGCCAGTGGACTTGAGCAA+CGG | 0.586144 | 3_4:-11637059 | Msa0490200:CDS |
| TAAGGACTGTCCATTATGTG+GGG | 0.597291 | 3_4:-11640996 | Msa0490200:CDS |
| GATGAATTCTGAGGAAATTG+TGG | 0.609327 | 3_4:+11642206 | None:intergenic |
| TGGTGTCGAATAGAAGTGCC+TGG | 0.612439 | 3_4:+11641162 | None:intergenic |
| ATGGGGACCTTCAAGCTGCA+AGG | 0.614405 | 3_4:-11638281 | Msa0490200:CDS |
| TCTTGGTGCAACAGGCCATG+AGG | 0.620045 | 3_4:-11640805 | Msa0490200:CDS |
| AATAAAGCTCAGGTGAACAA+AGG | 0.621839 | 3_4:-11636421 | Msa0490200:three_prime_UTR |
| ATATTAGTTACATTAATGCA+AGG | 0.625674 | 3_4:+11636199 | None:intergenic |
| AAACTAGAAATGAAGTAACA+TGG | 0.628201 | 3_4:-11636165 | Msa0490200:three_prime_UTR |
| AAAGACACTTGCAACAACGT+TGG | 0.629369 | 3_4:-11642164 | Msa0490200:five_prime_UTR |
| GAAGTAACATGGATGTATGT+CGG | 0.632354 | 3_4:-11636154 | Msa0490200:three_prime_UTR |
| AATTGTTCTTGACAACATCA+CGG | 0.633322 | 3_4:+11638229 | None:intergenic |
| TGATCTTAAATATTATGATG+GGG | 0.641979 | 3_4:-11638298 | Msa0490200:CDS |
| CGCAGTCAGATAGAAAAGGT+CGG | 0.648084 | 3_4:-11640254 | Msa0490200:CDS |
| TTCTTGAAATCCATCACTAG+CGG | 0.650386 | 3_4:+11637119 | None:intergenic |
| GTCTGTGAGTCATAACCCAA+CGG | 0.652534 | 3_4:+11641218 | None:intergenic |
| TGCGAACATCTTCTGCACAT+AGG | 0.654909 | 3_4:+11640273 | None:intergenic |
| TTGAAAAGGACATACCCTCA+TGG | 0.661737 | 3_4:+11640790 | None:intergenic |
| TAATAAGCCTGTTGTATACG+AGG | 0.669705 | 3_4:-11640852 | Msa0490200:CDS |
| GAACTTTCCGGTGACCGGAG+AGG | 0.682585 | 3_4:-11636276 | Msa0490200:three_prime_UTR |
| GGATGTGGACAAAAGTCTAG+GGG | 0.700647 | 3_4:-11637151 | Msa0490200:CDS |
| GAATTGTGCGATGAATTCTG+AGG | 0.725423 | 3_4:+11642197 | None:intergenic |
| ACATTGAAATCTGAAGCCAG+TGG | 0.727372 | 3_4:-11637072 | Msa0490200:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATTTAAATAATTAATT+CGG | + | chr3_4:11638221-11638240 | None:intergenic | 0.0% |
| !!! | TACTAAATTTCTAATTTTTA+TGG | + | chr3_4:11641164-11641183 | None:intergenic | 10.0% |
| !!! | TTGAATCTTGATATTATTTT+CGG | - | chr3_4:11636092-11636111 | Msa0490200:three_prime_UTR | 15.0% |
| !!! | AATATCATCAATTTTCAAAA+GGG | + | chr3_4:11636121-11636140 | None:intergenic | 15.0% |
| !! | AAATTAAATTTGTGAAAGAA+TGG | - | chr3_4:11637425-11637444 | Msa0490200:intron | 15.0% |
| !! | TTTCATGTTTAATAATACTT+CGG | - | chr3_4:11637551-11637570 | Msa0490200:intron | 15.0% |
| !! | AAATATTGTTTAGACATATA+TGG | - | chr3_4:11638027-11638046 | Msa0490200:intron | 15.0% |
| !! | ATTGTAGATATAGATAAAAA+TGG | + | chr3_4:11639104-11639123 | None:intergenic | 15.0% |
| !! | AACTATATAATAATGTGTTT+AGG | + | chr3_4:11639382-11639401 | None:intergenic | 15.0% |
| !! | ATTGTTTCACAAAATATAAA+AGG | - | chr3_4:11639538-11639557 | Msa0490200:intron | 15.0% |
| !! | TTGTTTCACAAAATATAAAA+GGG | - | chr3_4:11639539-11639558 | Msa0490200:intron | 15.0% |
| !!! | AAGCAAATTTTATTTTCAAA+CGG | + | chr3_4:11640530-11640549 | None:intergenic | 15.0% |
| !!! | TTATGTTTTTATCATTTTCA+TGG | + | chr3_4:11640626-11640645 | None:intergenic | 15.0% |
| !! | TTGATATAAACAATGAAAAA+AGG | + | chr3_4:11640951-11640970 | None:intergenic | 15.0% |
| !! | TTCATTGTTTATATCAATTT+AGG | - | chr3_4:11640954-11640973 | Msa0490200:CDS | 15.0% |
| !! | AAGACATTATATACTAAAAA+TGG | + | chr3_4:11641480-11641499 | None:intergenic | 15.0% |
| !! | TATAGAATATTCATAAATGT+TGG | - | chr3_4:11642072-11642091 | Msa0490200:intron | 15.0% |
| !!! | TTCATTTTGTAAAATTTGTT+TGG | - | chr3_4:11642135-11642154 | Msa0490200:five_prime_UTR | 15.0% |
| !!! | CAATATCATCAATTTTCAAA+AGG | + | chr3_4:11636122-11636141 | None:intergenic | 20.0% |
| !!! | CTTTTGAAAATTGATGATAT+TGG | - | chr3_4:11636120-11636139 | Msa0490200:three_prime_UTR | 20.0% |
| !!! | TGATGATATTGGAATAATTT+TGG | - | chr3_4:11636131-11636150 | Msa0490200:three_prime_UTR | 20.0% |
| !!! | GATGATATTGGAATAATTTT+GGG | - | chr3_4:11636132-11636151 | Msa0490200:three_prime_UTR | 20.0% |
| !! | ATTTGTTTGTAATTCTATTC+TGG | - | chr3_4:11636211-11636230 | Msa0490200:three_prime_UTR | 20.0% |
| !! | TTTGTTTGTAATTCTATTCT+GGG | - | chr3_4:11636212-11636231 | Msa0490200:three_prime_UTR | 20.0% |
| !!! | GTTGCAAATTTTGTTTATAT+AGG | - | chr3_4:11636404-11636423 | Msa0490200:three_prime_UTR | 20.0% |
| !! | AGTTAATGACAAAAATTTCA+AGG | + | chr3_4:11637456-11637475 | None:intergenic | 20.0% |
| !!! | AAGTTTTTTTATCCAAAACA+GGG | + | chr3_4:11637577-11637596 | None:intergenic | 20.0% |
| !!! | AAAGTTTTTTTATCCAAAAC+AGG | + | chr3_4:11637578-11637597 | None:intergenic | 20.0% |
| !!! | ACAAGAAGTATAATTTTAAG+CGG | + | chr3_4:11638431-11638450 | None:intergenic | 20.0% |
| !!! | ACGCAAATTTTTCAAAATTT+AGG | + | chr3_4:11638599-11638618 | None:intergenic | 20.0% |
| !! | TAGACTGATATATAAAGATA+CGG | - | chr3_4:11638703-11638722 | Msa0490200:intron | 20.0% |
| !! | ATATAATAATGTGTTTAGGA+GGG | + | chr3_4:11639378-11639397 | None:intergenic | 20.0% |
| !! | TATATAATAATGTGTTTAGG+AGG | + | chr3_4:11639379-11639398 | None:intergenic | 20.0% |
| !! | GACAATTATTTGAAAAATGT+TGG | + | chr3_4:11639412-11639431 | None:intergenic | 20.0% |
| !! | AAACAATAACAAATATGGTT+CGG | + | chr3_4:11639525-11639544 | None:intergenic | 20.0% |
| !! | TTGTGAAACAATAACAAATA+TGG | + | chr3_4:11639530-11639549 | None:intergenic | 20.0% |
| !! | GTGATCTTAAATATTATGAT+GGG | - | chr3_4:11639863-11639882 | Msa0490200:intron | 20.0% |
| !! | TGATCTTAAATATTATGATG+GGG | - | chr3_4:11639864-11639883 | Msa0490200:intron | 20.0% |
| !! | TTTGAATTATATCTAATCGT+AGG | - | chr3_4:11639997-11640016 | Msa0490200:intron | 20.0% |
| !! | TTGAATTATATCTAATCGTA+GGG | - | chr3_4:11639998-11640017 | Msa0490200:intron | 20.0% |
| !!! | TCAAATAAAACTTTAAAGCA+AGG | + | chr3_4:11640031-11640050 | None:intergenic | 20.0% |
| !!! | AATAAACTGAAAACATCTTT+TGG | + | chr3_4:11640140-11640159 | None:intergenic | 20.0% |
| !! | GAAAATAGATTATAGCTTAT+AGG | - | chr3_4:11640175-11640194 | Msa0490200:intron | 20.0% |
| !! | AATTATTTGTTTATCGAAAC+AGG | - | chr3_4:11640301-11640320 | Msa0490200:CDS | 20.0% |
| !! | ATTATTTGTTTATCGAAACA+GGG | - | chr3_4:11640302-11640321 | Msa0490200:CDS | 20.0% |
| !! | AAATCACATCATGAAATATT+TGG | + | chr3_4:11640368-11640387 | None:intergenic | 20.0% |
| !!! | AAATAAAATTTGCTTTGACA+AGG | - | chr3_4:11640535-11640554 | Msa0490200:intron | 20.0% |
| !!! | AATGTCTTGTTTATTAGATA+TGG | - | chr3_4:11641492-11641511 | Msa0490200:intron | 20.0% |
| !! | ATATTAGTTACATTAATGCA+AGG | + | chr3_4:11641966-11641985 | None:intergenic | 20.0% |
| ! | TGTTCATGTTCTAATTTGAT+AGG | - | chr3_4:11636306-11636325 | Msa0490200:three_prime_UTR | 25.0% |
| !! | AATGATACTTTTGTGTGTTT+TGG | - | chr3_4:11636382-11636401 | Msa0490200:three_prime_UTR | 25.0% |
| !!! | GAATGATAGTTTTGTGTTTT+TGG | - | chr3_4:11636541-11636560 | Msa0490200:CDS | 25.0% |
| ! | ATTTGTGTCTATAATCAAAG+AGG | - | chr3_4:11636648-11636667 | Msa0490200:intron | 25.0% |
| !!! | TTGATACTTTTTCGTGTTTT+TGG | - | chr3_4:11636679-11636698 | Msa0490200:intron | 25.0% |
| !!! | ATTTTAACAAAAGGACATAC+TGG | + | chr3_4:11636800-11636819 | None:intergenic | 25.0% |
| !! | GAATGAAGTCTTATATATGA+AGG | - | chr3_4:11637399-11637418 | Msa0490200:intron | 25.0% |
| ! | TAACCTATAAGTTGTTTATC+TGG | - | chr3_4:11637698-11637717 | Msa0490200:intron | 25.0% |
| ! | TATCCAGATAAACAACTTAT+AGG | + | chr3_4:11637704-11637723 | None:intergenic | 25.0% |
| ! | ATAAGTTGTTTATCTGGATA+TGG | - | chr3_4:11637704-11637723 | Msa0490200:intron | 25.0% |
| !!! | ACCATTTGTAATTCTAAAAC+AGG | - | chr3_4:11637823-11637842 | Msa0490200:intron | 25.0% |
| ! | ATTGTTTAGACATATATGGT+TGG | - | chr3_4:11638031-11638050 | Msa0490200:intron | 25.0% |
| !! | TTTACTCTTCATCTTTTTCT+AGG | + | chr3_4:11638323-11638342 | None:intergenic | 25.0% |
| ! | ATTATACTTCTTGTGAATGA+AGG | - | chr3_4:11638437-11638456 | Msa0490200:intron | 25.0% |
| !! | TCAAAATTTAGGATACGATA+CGG | + | chr3_4:11638588-11638607 | None:intergenic | 25.0% |
| ! | AATGTTTAGATTAGAATCAG+TGG | - | chr3_4:11638990-11639009 | Msa0490200:intron | 25.0% |
| ! | CGTTGAATTCAAATCATAAT+TGG | - | chr3_4:11639030-11639049 | Msa0490200:intron | 25.0% |
| ! | TCAAATCATAATTGGTATTG+AGG | - | chr3_4:11639038-11639057 | Msa0490200:intron | 25.0% |
| !! | CAAATCATAATTGGTATTGA+GGG | - | chr3_4:11639039-11639058 | Msa0490200:intron | 25.0% |
| ! | AAACTAGCAAAAACTAATTC+TGG | + | chr3_4:11639177-11639196 | None:intergenic | 25.0% |
| ! | TATAATAATGTGTTTAGGAG+GGG | + | chr3_4:11639377-11639396 | None:intergenic | 25.0% |
| ! | ATTTGAAAAATGTTGGAAGT+TGG | + | chr3_4:11639405-11639424 | None:intergenic | 25.0% |
| ! | AACAATAACAAATATGGTTC+GGG | + | chr3_4:11639524-11639543 | None:intergenic | 25.0% |
| !! | ACCAATTTTATTAAGCGAAA+CGG | + | chr3_4:11639845-11639864 | None:intergenic | 25.0% |
| ! | GGTGATCTTAAATATTATGA+TGG | - | chr3_4:11639862-11639881 | Msa0490200:intron | 25.0% |
| !!! | ATAAAACTTTAAAGCAAGGT+GGG | + | chr3_4:11640027-11640046 | None:intergenic | 25.0% |
| !!! | AATAAAACTTTAAAGCAAGG+TGG | + | chr3_4:11640028-11640047 | None:intergenic | 25.0% |
| ! | GAACTTATAGAAACAACTTA+TGG | - | chr3_4:11640109-11640128 | Msa0490200:intron | 25.0% |
| !! | TGATAAGCTTTTACATCTTA+TGG | - | chr3_4:11640267-11640286 | Msa0490200:CDS | 25.0% |
| ! | ATGAATCTAACTAATGTGAT+TGG | + | chr3_4:11640394-11640413 | None:intergenic | 25.0% |
| ! | CATAATAGAAAGAGAAAAGA+AGG | - | chr3_4:11640641-11640660 | Msa0490200:intron | 25.0% |
| ! | AATTAACCTAAGTGGTTAAT+GGG | + | chr3_4:11640850-11640869 | None:intergenic | 25.0% |
| ! | AAAGATTCAATTAACCTAAG+TGG | + | chr3_4:11640858-11640877 | None:intergenic | 25.0% |
| ! | GATGATATAACTTGATTCAA+TGG | - | chr3_4:11641231-11641250 | Msa0490200:CDS | 25.0% |
| ! | TATAACTTGATTCAATGGTT+AGG | - | chr3_4:11641236-11641255 | Msa0490200:CDS | 25.0% |
| !! | TTCAACTTGTTCTTGTTTAT+CGG | + | chr3_4:11641623-11641642 | None:intergenic | 25.0% |
| ! | GAGAAATACAGTGAATAAAA+AGG | + | chr3_4:11641856-11641875 | None:intergenic | 25.0% |
| ! | AAACTAGAAATGAAGTAACA+TGG | - | chr3_4:11641997-11642016 | Msa0490200:intron | 25.0% |
| !!! | TTCATAAATGTTGGTGTTTT+TGG | - | chr3_4:11642081-11642100 | Msa0490200:intron | 25.0% |
| !!! | TATCATTTCTAGTCAAAATG+AGG | - | chr3_4:11642208-11642227 | Msa0490200:five_prime_UTR | 25.0% |
| !! | TTGGAATAATTTTGGGTACT+TGG | - | chr3_4:11636139-11636158 | Msa0490200:three_prime_UTR | 30.0% |
| !! | TGGAATAATTTTGGGTACTT+GGG | - | chr3_4:11636140-11636159 | Msa0490200:three_prime_UTR | 30.0% |
| ! | AATTCTATTCTGGGAATGTT+TGG | - | chr3_4:11636221-11636240 | Msa0490200:three_prime_UTR | 30.0% |
| !!! | TTTTTGGTTGCACATTTTGT+AGG | - | chr3_4:11636557-11636576 | Msa0490200:CDS | 30.0% |
| TGAAAGTAAGGTTAAGAAAG+AGG | - | chr3_4:11636889-11636908 | Msa0490200:intron | 30.0% | |
| AGGTCTGTTAATTTAGACAA+TGG | - | chr3_4:11637269-11637288 | Msa0490200:intron | 30.0% | |
| GACTTCATTCACATTTGAAA+AGG | + | chr3_4:11637389-11637408 | None:intergenic | 30.0% | |
| ATTATCATCCACAATGAAAG+TGG | - | chr3_4:11637476-11637495 | Msa0490200:intron | 30.0% | |
| GGTAAAATGCTATTATCAAG+TGG | + | chr3_4:11637806-11637825 | None:intergenic | 30.0% | |
| !!! | GCCTGTTTTAGAATTACAAA+TGG | + | chr3_4:11637827-11637846 | None:intergenic | 30.0% |
| AATTAATTCGGATACTTCGT+GGG | + | chr3_4:11638209-11638228 | None:intergenic | 30.0% | |
| TAATTAATTCGGATACTTCG+TGG | + | chr3_4:11638210-11638229 | None:intergenic | 30.0% | |
| GAGACAATGTTGTAAACATT+CGG | - | chr3_4:11638348-11638367 | Msa0490200:intron | 30.0% | |
| ACGTTGTATCATAGCAAAAT+TGG | - | chr3_4:11638872-11638891 | Msa0490200:intron | 30.0% | |
| !! | CTGTTTGCTTTTATCTTTCT+TGG | + | chr3_4:11638969-11638988 | None:intergenic | 30.0% |
| CAAGAAAGATAAAAGCAAAC+AGG | - | chr3_4:11638967-11638986 | Msa0490200:intron | 30.0% | |
| AGATTAGAATCAGTGGATAT+TGG | - | chr3_4:11638997-11639016 | Msa0490200:intron | 30.0% | |
| ATAATAATGTGTTTAGGAGG+GGG | + | chr3_4:11639376-11639395 | None:intergenic | 30.0% | |
| AAAGTTGCCTAAAGATGATT+TGG | - | chr3_4:11639689-11639708 | Msa0490200:intron | 30.0% | |
| ATAACCTCCAAATCATCTTT+AGG | + | chr3_4:11639699-11639718 | None:intergenic | 30.0% | |
| AAAGTGTATGTGTAATCTGT+AGG | + | chr3_4:11639822-11639841 | None:intergenic | 30.0% | |
| TCCGTTTCGCTTAATAAAAT+TGG | - | chr3_4:11639841-11639860 | Msa0490200:intron | 30.0% | |
| AATTGTTCTTGACAACATCA+CGG | + | chr3_4:11639936-11639955 | None:intergenic | 30.0% | |
| CAATTCAAATGTTTCATCTC+AGG | - | chr3_4:11639951-11639970 | Msa0490200:intron | 30.0% | |
| TTTCTATAAGTTCTCGCAAA+CGG | + | chr3_4:11640102-11640121 | None:intergenic | 30.0% | |
| ! | GTTTTCAGTTTATTTCCGTA+TGG | - | chr3_4:11640146-11640165 | Msa0490200:intron | 30.0% |
| ! | TCTATTTTCTTTGTGCCATA+CGG | + | chr3_4:11640164-11640183 | None:intergenic | 30.0% |
| ! | TAGATTCATTTCTAGACATG+AGG | - | chr3_4:11640405-11640424 | Msa0490200:intron | 30.0% |
| ! | AGATTCATTTCTAGACATGA+GGG | - | chr3_4:11640406-11640425 | Msa0490200:intron | 30.0% |
| ! | AAAATTTGCTTTGACAAGGT+TGG | - | chr3_4:11640539-11640558 | Msa0490200:intron | 30.0% |
| ! | AAATTTGCTTTGACAAGGTT+GGG | - | chr3_4:11640540-11640559 | Msa0490200:intron | 30.0% |
| TGCACTAGTGAAAACTAAAA+TGG | - | chr3_4:11640692-11640711 | Msa0490200:intron | 30.0% | |
| ! | ATAACTTTTCCACTAATCAG+AGG | - | chr3_4:11640719-11640738 | Msa0490200:intron | 30.0% |
| GGCAAGATAAATTGTACTTA+TGG | + | chr3_4:11640829-11640848 | None:intergenic | 30.0% | |
| CAATTAACCTAAGTGGTTAA+TGG | + | chr3_4:11640851-11640870 | None:intergenic | 30.0% | |
| GTAAGTAATAACTTCACACT+AGG | + | chr3_4:11641318-11641337 | None:intergenic | 30.0% | |
| GTGTGAAGTTATTACTTACT+AGG | - | chr3_4:11641319-11641338 | Msa0490200:CDS | 30.0% | |
| CAATTTCAATCCTTCTATAG+CGG | - | chr3_4:11641563-11641582 | Msa0490200:intron | 30.0% | |
| ! | CAAGTTGAACAAACAATATG+AGG | - | chr3_4:11641634-11641653 | Msa0490200:intron | 30.0% |
| ! | TAAATGTTTCTGTATGCGAT+TGG | - | chr3_4:11641706-11641725 | Msa0490200:intron | 30.0% |
| TCATGTGTAAAATAAAGCTC+AGG | - | chr3_4:11641731-11641750 | Msa0490200:intron | 30.0% | |
| !! | GAACAAAGGCATTATAATAG+AGG | - | chr3_4:11641755-11641774 | Msa0490200:intron | 30.0% |
| ACTATAGAATGAGTTCAAGT+TGG | + | chr3_4:11642042-11642061 | None:intergenic | 30.0% | |
| TGGTGACTATTACATGTATT+TGG | - | chr3_4:11642155-11642174 | Msa0490200:five_prime_UTR | 30.0% | |
| ! | GATGAATTCTGAGGAAATTG+TGG | + | chr3_4:11635959-11635978 | None:intergenic | 35.0% |
| TGCAAAGATGTTGCATTTGT+TGG | - | chr3_4:11636451-11636470 | Msa0490200:three_prime_UTR | 35.0% | |
| TGCAAATGTCTTGTCTTTGT+AGG | - | chr3_4:11636747-11636766 | Msa0490200:intron | 35.0% | |
| ! | TTTTGTTAAAATTCCCCGTC+CGG | - | chr3_4:11636808-11636827 | Msa0490200:intron | 35.0% |
| TTAGAAACATTACCGTCATC+CGG | + | chr3_4:11636830-11636849 | None:intergenic | 35.0% | |
| !!! | GACTCACAGACTTTTAAGAT+TGG | - | chr3_4:11636956-11636975 | Msa0490200:intron | 35.0% |
| ! | TTTTCTGCAAGTATGTATCG+TGG | - | chr3_4:11637047-11637066 | Msa0490200:intron | 35.0% |
| TTTAAGGACTGTCCATTATG+TGG | - | chr3_4:11637164-11637183 | Msa0490200:CDS | 35.0% | |
| TTAAGGACTGTCCATTATGT+GGG | - | chr3_4:11637165-11637184 | Msa0490200:CDS | 35.0% | |
| ! | GTAGTTGATCGCTTTATTGA+AGG | - | chr3_4:11637230-11637249 | Msa0490200:intron | 35.0% |
| ! | ATTAACAGACCTTTTGATCC+TGG | + | chr3_4:11637261-11637280 | None:intergenic | 35.0% |
| TAATAAGCCTGTTGTATACG+AGG | - | chr3_4:11637310-11637329 | Msa0490200:intron | 35.0% | |
| TTTGGAAAGAGGTTCTTTCT+TGG | - | chr3_4:11637340-11637359 | Msa0490200:intron | 35.0% | |
| ! | ACTTTTGATACATTCTGAGC+TGG | - | chr3_4:11637519-11637538 | Msa0490200:intron | 35.0% |
| CACTTTCTAAATTCTGAGCA+CGG | + | chr3_4:11637853-11637872 | None:intergenic | 35.0% | |
| ACATAGGTTCAGTCTTGATT+TGG | + | chr3_4:11637876-11637895 | None:intergenic | 35.0% | |
| TCAGAGTTATGTTCACAACT+TGG | - | chr3_4:11637938-11637957 | Msa0490200:intron | 35.0% | |
| CTAAGAGTAGTGTATCTGTT+AGG | - | chr3_4:11638083-11638102 | Msa0490200:intron | 35.0% | |
| TAGTGTATCTGTTAGGACTT+AGG | - | chr3_4:11638090-11638109 | Msa0490200:intron | 35.0% | |
| TAAGTATCCTTGTGTATCTG+CGG | + | chr3_4:11638277-11638296 | None:intergenic | 35.0% | |
| ACAATGTTGTAAACATTCGG+TGG | - | chr3_4:11638351-11638370 | Msa0490200:intron | 35.0% | |
| ! | AGTAGGAGTTTCATTGATTG+AGG | - | chr3_4:11638674-11638693 | Msa0490200:intron | 35.0% |
| TAAAGATACGGTCGAAATAC+TGG | - | chr3_4:11638715-11638734 | Msa0490200:intron | 35.0% | |
| TAACCAGTGTTGTCAAATAG+CGG | - | chr3_4:11638747-11638766 | Msa0490200:intron | 35.0% | |
| CTGTCAAATAGCAGTTATAG+TGG | - | chr3_4:11638842-11638861 | Msa0490200:intron | 35.0% | |
| ! | GCTATATGCAGTTTTACTGT+CGG | + | chr3_4:11638936-11638955 | None:intergenic | 35.0% |
| AAAAGCAGTATTCGCCTTTA+TGG | - | chr3_4:11639148-11639167 | Msa0490200:intron | 35.0% | |
| ACTAATTCTGGACACCATAA+AGG | + | chr3_4:11639165-11639184 | None:intergenic | 35.0% | |
| !! | GTTCTCTCACACTTTGAAAT+AGG | - | chr3_4:11639201-11639220 | Msa0490200:intron | 35.0% |
| !! | AAATAGGTCCCAAAAGCATT+AGG | - | chr3_4:11639217-11639236 | Msa0490200:intron | 35.0% |
| !!! | TCCCAAAAGCATTAGGTTTT+TGG | - | chr3_4:11639224-11639243 | Msa0490200:intron | 35.0% |
| ! | CCCAAAAACCTAATGCTTTT+GGG | + | chr3_4:11639228-11639247 | None:intergenic | 35.0% |
| !!! | CCCAAAAGCATTAGGTTTTT+GGG | - | chr3_4:11639225-11639244 | Msa0490200:intron | 35.0% |
| !!! | CCAAAAGCATTAGGTTTTTG+GGG | - | chr3_4:11639226-11639245 | Msa0490200:intron | 35.0% |
| TAGTTTGAGCTAAGGAAATC+GGG | + | chr3_4:11639337-11639356 | None:intergenic | 35.0% | |
| CTAGTTTGAGCTAAGGAAAT+CGG | + | chr3_4:11639338-11639357 | None:intergenic | 35.0% | |
| ATGAAACAGGAAAGGGAAAA+AGG | + | chr3_4:11639497-11639516 | None:intergenic | 35.0% | |
| CACTAAAGCAAAGAAAAGCA+AGG | + | chr3_4:11639732-11639751 | None:intergenic | 35.0% | |
| TCAAATGTTTCATCTCAGGT+TGG | - | chr3_4:11639955-11639974 | Msa0490200:intron | 35.0% | |
| AAGCTAAAATCCACATACTG+AGG | + | chr3_4:11640328-11640347 | None:intergenic | 35.0% | |
| ! | GATTCATTTCTAGACATGAG+GGG | - | chr3_4:11640407-11640426 | Msa0490200:intron | 35.0% |
| AGTTAAGAAGCAGACTGATA+AGG | - | chr3_4:11640460-11640479 | Msa0490200:intron | 35.0% | |
| TCCCAGCATAATACTAACAT+GGG | - | chr3_4:11640504-11640523 | Msa0490200:intron | 35.0% | |
| AATCTCAGAAATCAGAACAC+AGG | + | chr3_4:11640600-11640619 | None:intergenic | 35.0% | |
| ATAGAAAGAGAAAAGAAGGC+AGG | - | chr3_4:11640645-11640664 | Msa0490200:intron | 35.0% | |
| TTACAAGAACTCACGTAATG+AGG | + | chr3_4:11640757-11640776 | None:intergenic | 35.0% | |
| TTCTTGAAATCCATCACTAG+CGG | + | chr3_4:11641046-11641065 | None:intergenic | 35.0% | |
| AATAAAGCTCAGGTGAACAA+AGG | - | chr3_4:11641741-11641760 | Msa0490200:intron | 35.0% | |
| ! | AGACTTTTCATTCAGAGTGA+TGG | - | chr3_4:11641785-11641804 | Msa0490200:intron | 35.0% |
| !! | ATTCAGAGTGATGGATATCT+CGG | - | chr3_4:11641794-11641813 | Msa0490200:intron | 35.0% |
| !! | ATGGATATCTCGGTCATTTT+TGG | - | chr3_4:11641804-11641823 | Msa0490200:intron | 35.0% |
| CAACTCCTTTAGTACCTTAT+TGG | - | chr3_4:11641913-11641932 | Msa0490200:intron | 35.0% | |
| ! | ATGCACCAATAAGGTACTAA+AGG | + | chr3_4:11641921-11641940 | None:intergenic | 35.0% |
| TAGTACCTTATTGGTGCATA+AGG | - | chr3_4:11641922-11641941 | Msa0490200:intron | 35.0% | |
| ! | GTTTTCCTTATGCACCAATA+AGG | + | chr3_4:11641930-11641949 | None:intergenic | 35.0% |
| GAAGTAACATGGATGTATGT+CGG | - | chr3_4:11642008-11642027 | Msa0490200:intron | 35.0% | |
| ! | TTGTGGATTGTGTGATGATG+CGG | + | chr3_4:11635942-11635961 | None:intergenic | 40.0% |
| GAATTGTGCGATGAATTCTG+AGG | + | chr3_4:11635968-11635987 | None:intergenic | 40.0% | |
| AAAGACACTTGCAACAACGT+TGG | - | chr3_4:11635998-11636017 | Msa0490200:three_prime_UTR | 40.0% | |
| !! | TCTGGGAATGTTTGGTTTGA+TGG | - | chr3_4:11636229-11636248 | Msa0490200:three_prime_UTR | 40.0% |
| GTCTTTGTAGGTTCTTGTTG+TGG | - | chr3_4:11636759-11636778 | Msa0490200:intron | 40.0% | |
| !! | GGACGGGGAATTTTAACAAA+AGG | + | chr3_4:11636809-11636828 | None:intergenic | 40.0% |
| CCTTACTTTCATGCTCTACA+TGG | + | chr3_4:11636880-11636899 | None:intergenic | 40.0% | |
| CCATGTAGAGCATGAAAGTA+AGG | - | chr3_4:11636877-11636896 | Msa0490200:intron | 40.0% | |
| ! | GATTGGTCCTCTTAGTTGTA+TGG | - | chr3_4:11636973-11636992 | Msa0490200:intron | 40.0% |
| TGGCATACCATACAACTAAG+AGG | + | chr3_4:11636983-11637002 | None:intergenic | 40.0% | |
| TCTTAGTTGTATGGTATGCC+AGG | - | chr3_4:11636982-11637001 | Msa0490200:intron | 40.0% | |
| TTGCAGAAAACGTGAGAACA+AGG | + | chr3_4:11637037-11637056 | None:intergenic | 40.0% | |
| TTTATGTCTGTCTCTTGTGC+AGG | - | chr3_4:11637126-11637145 | Msa0490200:CDS | 40.0% | |
| TTATGTCTGTCTCTTGTGCA+GGG | - | chr3_4:11637127-11637146 | Msa0490200:CDS | 40.0% | |
| GGCATGTATATTGCGCTTTA+AGG | - | chr3_4:11637148-11637167 | Msa0490200:CDS | 40.0% | |
| TAAGGACTGTCCATTATGTG+GGG | - | chr3_4:11637166-11637185 | Msa0490200:CDS | 40.0% | |
| TCAATATCAGCCCCACATAA+TGG | + | chr3_4:11637179-11637198 | None:intergenic | 40.0% | |
| TACACCTTGAAGATCAGCAT+CGG | + | chr3_4:11637213-11637232 | None:intergenic | 40.0% | |
| TGTATACGAGGATGTGTCTT+TGG | - | chr3_4:11637322-11637341 | Msa0490200:intron | 40.0% | |
| TTGAAAAGGACATACCCTCA+TGG | + | chr3_4:11637375-11637394 | None:intergenic | 40.0% | |
| CATAGTCACCACTTTCATTG+TGG | + | chr3_4:11637487-11637506 | None:intergenic | 40.0% | |
| ! | ATAATACTTCGGCCCTGTTT+TGG | - | chr3_4:11637562-11637581 | Msa0490200:intron | 40.0% |
| TCTGGATATGGCATTGTTGA+TGG | - | chr3_4:11637716-11637735 | Msa0490200:intron | 40.0% | |
| TGTTCGCAGTCAGATAGAAA+AGG | - | chr3_4:11637904-11637923 | Msa0490200:intron | 40.0% | |
| ATTGGTATCCGATACGTATC+CGG | + | chr3_4:11638160-11638179 | None:intergenic | 40.0% | |
| TATCGGATACCAATACTCCA+CGG | - | chr3_4:11638166-11638185 | Msa0490200:intron | 40.0% | |
| ! | ATTTAGGATACGATACGGCT+AGG | + | chr3_4:11638583-11638602 | None:intergenic | 40.0% |
| !!! | GTATTGAGGGTTTCGAGTTT+TGG | - | chr3_4:11639052-11639071 | Msa0490200:intron | 40.0% |
| ! | CCCCAAAAACCTAATGCTTT+TGG | + | chr3_4:11639229-11639248 | None:intergenic | 40.0% |
| !! | AGCATTAGGTTTTTGGGGAT+AGG | - | chr3_4:11639231-11639250 | Msa0490200:intron | 40.0% |
| AGTTGAGGCTTAAAGGACTA+TGG | + | chr3_4:11639313-11639332 | None:intergenic | 40.0% | |
| AGTTTGAGCTAAGGAAATCG+GGG | + | chr3_4:11639336-11639355 | None:intergenic | 40.0% | |
| ! | AGGTCAACTAGTTTGAGCTA+AGG | + | chr3_4:11639345-11639364 | None:intergenic | 40.0% |
| ACAGGAAAGGGAAAAAGGTA+TGG | + | chr3_4:11639492-11639511 | None:intergenic | 40.0% | |
| GGGATGAATGAAACAGGAAA+GGG | + | chr3_4:11639504-11639523 | None:intergenic | 40.0% | |
| ! | GTTGCCTAAAGATGATTTGG+AGG | - | chr3_4:11639692-11639711 | Msa0490200:intron | 40.0% |
| TAAGAAGCAGACTGATAAGG+AGG | - | chr3_4:11640463-11640482 | Msa0490200:intron | 40.0% | |
| TTAGTATTATGCTGGGACTG+GGG | + | chr3_4:11640501-11640520 | None:intergenic | 40.0% | |
| GTTAGTATTATGCTGGGACT+GGG | + | chr3_4:11640502-11640521 | None:intergenic | 40.0% | |
| TGTTAGTATTATGCTGGGAC+TGG | + | chr3_4:11640503-11640522 | None:intergenic | 40.0% | |
| GTCCCAGCATAATACTAACA+TGG | - | chr3_4:11640503-11640522 | Msa0490200:intron | 40.0% | |
| GCCCATGTTAGTATTATGCT+GGG | + | chr3_4:11640508-11640527 | None:intergenic | 40.0% | |
| TCACGTAATGAGGAAACTAC+GGG | + | chr3_4:11640747-11640766 | None:intergenic | 40.0% | |
| CTCACGTAATGAGGAAACTA+CGG | + | chr3_4:11640748-11640767 | None:intergenic | 40.0% | |
| ATCTTGCCCATTAACCACTT+AGG | - | chr3_4:11640841-11640860 | Msa0490200:CDS | 40.0% | |
| CCAAATGACATGTTCTAACG+TGG | + | chr3_4:11640899-11640918 | None:intergenic | 40.0% | |
| CCACGTTAGAACATGTCATT+TGG | - | chr3_4:11640896-11640915 | Msa0490200:CDS | 40.0% | |
| ! | GAACATGTCATTTGGACAGA+AGG | - | chr3_4:11640904-11640923 | Msa0490200:CDS | 40.0% |
| !!! | CGCTACTTTTGCAAGAGAAA+CGG | + | chr3_4:11640992-11641011 | None:intergenic | 40.0% |
| CGTTTCTCTTGCAAAAGTAG+CGG | - | chr3_4:11640990-11641009 | Msa0490200:CDS | 40.0% | |
| TAGAGATTCCAGCAAGTCTA+TGG | + | chr3_4:11641070-11641089 | None:intergenic | 40.0% | |
| ! | ACATTGAAATCTGAAGCCAG+TGG | - | chr3_4:11641090-11641109 | Msa0490200:intron | 40.0% |
| AGACTTCCTTAGAAGCCAAA+AGG | - | chr3_4:11641597-11641616 | Msa0490200:intron | 40.0% | |
| !! | GTTCTTGTTTATCGGCCTTT+TGG | + | chr3_4:11641615-11641634 | None:intergenic | 40.0% |
| ! | TGCTTTTCCTTTTGCTAGCA+AGG | + | chr3_4:11641671-11641690 | None:intergenic | 40.0% |
| TCTCTCCTACTAGAACTTTC+CGG | - | chr3_4:11641874-11641893 | Msa0490200:intron | 40.0% | |
| AAACATTACCGTCATCCGGA+CGG | + | chr3_4:11636826-11636845 | None:intergenic | 45.0% | |
| TCATAACCCAACGGACACTT+TGG | + | chr3_4:11636938-11636957 | None:intergenic | 45.0% | |
| GTCTGTGAGTCATAACCCAA+CGG | + | chr3_4:11636947-11636966 | None:intergenic | 45.0% | |
| AGAACAAGGCACACATTTGC+TGG | + | chr3_4:11637023-11637042 | None:intergenic | 45.0% | |
| ACACCTTGAAGATCAGCATC+GGG | + | chr3_4:11637212-11637231 | None:intergenic | 45.0% | |
| ! | GCTTTATTGAAGGTCATGCC+AGG | - | chr3_4:11637240-11637259 | Msa0490200:intron | 45.0% |
| AAGGTCATGCCAGGATCAAA+AGG | - | chr3_4:11637249-11637268 | Msa0490200:intron | 45.0% | |
| GACACATCCTCGTATACAAC+AGG | + | chr3_4:11637320-11637339 | None:intergenic | 45.0% | |
| ! | GAGGATGTGTCTTTGGAAAG+AGG | - | chr3_4:11637329-11637348 | Msa0490200:intron | 45.0% |
| ! | AGGTTCTTTCTTGGTGCAAC+AGG | - | chr3_4:11637349-11637368 | Msa0490200:intron | 45.0% |
| CTGTAGCTTCAGCAGATCAA+GGG | + | chr3_4:11637745-11637764 | None:intergenic | 45.0% | |
| TGCGAACATCTTCTGCACAT+AGG | + | chr3_4:11637892-11637911 | None:intergenic | 45.0% | |
| CGCAGTCAGATAGAAAAGGT+CGG | - | chr3_4:11637908-11637927 | Msa0490200:intron | 45.0% | |
| TTCACAACTTGGAGCAGTCT+TGG | - | chr3_4:11637949-11637968 | Msa0490200:intron | 45.0% | |
| TCACAACTTGGAGCAGTCTT+GGG | - | chr3_4:11637950-11637969 | Msa0490200:intron | 45.0% | |
| ! | GGTTGGTGCTTAGCGAAAAA+TGG | - | chr3_4:11638048-11638067 | Msa0490200:intron | 45.0% |
| CTTAGGAGTTCTATGAAGCC+CGG | - | chr3_4:11638107-11638126 | Msa0490200:intron | 45.0% | |
| TATCCGATACGTATCCGGTA+CGG | + | chr3_4:11638155-11638174 | None:intergenic | 45.0% | |
| CTTGTGTATCTGCGGAGTAT+CGG | + | chr3_4:11638269-11638288 | None:intergenic | 45.0% | |
| CCTACTATGAAGCCCAGATA+CGG | + | chr3_4:11638660-11638679 | None:intergenic | 45.0% | |
| TAGCCGCTATTTGACAACAC+TGG | + | chr3_4:11638753-11638772 | None:intergenic | 45.0% | |
| AAGGACTATGGTTCAAACCC+CGG | + | chr3_4:11639301-11639320 | None:intergenic | 45.0% | |
| TGTGTTTAGGAGGGGGAATT+GGG | + | chr3_4:11639369-11639388 | None:intergenic | 45.0% | |
| ATGTGTTTAGGAGGGGGAAT+TGG | + | chr3_4:11639370-11639389 | None:intergenic | 45.0% | |
| CGGGATGAATGAAACAGGAA+AGG | + | chr3_4:11639505-11639524 | None:intergenic | 45.0% | |
| ! | TGGTTCGGGATGAATGAAAC+AGG | + | chr3_4:11639510-11639529 | None:intergenic | 45.0% |
| ! | AATTTTCTGCAGCCGAGCAA+TGG | - | chr3_4:11639614-11639633 | Msa0490200:intron | 45.0% |
| ! | ATTTTCTGCAGCCGAGCAAT+GGG | - | chr3_4:11639615-11639634 | Msa0490200:intron | 45.0% |
| AACTGCTATCACCCATTGCT+CGG | + | chr3_4:11639629-11639648 | None:intergenic | 45.0% | |
| GACATGAGGGGATAGAATGA+TGG | - | chr3_4:11640419-11640438 | Msa0490200:intron | 45.0% | |
| GGCCCATGTTAGTATTATGC+TGG | + | chr3_4:11640509-11640528 | None:intergenic | 45.0% | |
| TCTAACGTGGAAATGCGCAT+GGG | + | chr3_4:11640886-11640905 | None:intergenic | 45.0% | |
| TTCTAACGTGGAAATGCGCA+TGG | + | chr3_4:11640887-11640906 | None:intergenic | 45.0% | |
| ! | TGTCATTTGGACAGAAGGCA+TGG | - | chr3_4:11640909-11640928 | Msa0490200:CDS | 45.0% |
| !! | TCTTGCAAAAGTAGCGGATG+TGG | - | chr3_4:11640996-11641015 | Msa0490200:CDS | 45.0% |
| CGGATGTGGACAAAAGTCTA+GGG | - | chr3_4:11641010-11641029 | Msa0490200:CDS | 45.0% | |
| GGATGTGGACAAAAGTCTAG+GGG | - | chr3_4:11641011-11641030 | Msa0490200:CDS | 45.0% | |
| GATGAAAAGTCCGCTAGTGA+TGG | - | chr3_4:11641033-11641052 | Msa0490200:intron | 45.0% | |
| TCAAGAAGCCATAGACTTGC+TGG | - | chr3_4:11641059-11641078 | Msa0490200:intron | 45.0% | |
| GAACAGATAGCCGCTATAGA+AGG | + | chr3_4:11641576-11641595 | None:intergenic | 45.0% | |
| !!! | TATCGGCCTTTTGGCTTCTA+AGG | + | chr3_4:11641606-11641625 | None:intergenic | 45.0% |
| ATACACGCCTTGCTAGCAAA+AGG | - | chr3_4:11641661-11641680 | Msa0490200:intron | 45.0% | |
| TACTAGAACTTTCCGGTGAC+CGG | - | chr3_4:11641881-11641900 | Msa0490200:intron | 45.0% | |
| AAAGGAGTTGTGATCCTCTC+CGG | + | chr3_4:11641903-11641922 | None:intergenic | 45.0% | |
| !!! | ATTTTTAAAAAGTATTTTAA+CGG | - | chr3_4:11638235-11638254 | Msa0490200:CDS | 5.0% |
| ! | TGTGTGATGATGCGGTTGGT+TGG | + | chr3_4:11635934-11635953 | None:intergenic | 50.0% |
| ! | GGATTGTGTGATGATGCGGT+TGG | + | chr3_4:11635938-11635957 | None:intergenic | 50.0% |
| AAAATTCCCCGTCCGGATGA+CGG | - | chr3_4:11636815-11636834 | Msa0490200:intron | 50.0% | |
| AACATTACCGTCATCCGGAC+GGG | + | chr3_4:11636825-11636844 | None:intergenic | 50.0% | |
| ! | TGTCTCACCAAAGTGTCCGT+TGG | - | chr3_4:11636928-11636947 | Msa0490200:intron | 50.0% |
| ! | GTCTCACCAAAGTGTCCGTT+GGG | - | chr3_4:11636929-11636948 | Msa0490200:intron | 50.0% |
| !! | TGGTGTCGAATAGAAGTGCC+TGG | + | chr3_4:11637003-11637022 | None:intergenic | 50.0% |
| GCTGTAGCTTCAGCAGATCA+AGG | + | chr3_4:11637746-11637765 | None:intergenic | 50.0% | |
| GAAGCCCGGATACTCCAAAA+CGG | - | chr3_4:11638121-11638140 | Msa0490200:intron | 50.0% | |
| !!! | GTCTCCGTTTTGGAGTATCC+GGG | + | chr3_4:11638128-11638147 | None:intergenic | 50.0% |
| !!! | CGTCTCCGTTTTGGAGTATC+CGG | + | chr3_4:11638129-11638148 | None:intergenic | 50.0% |
| TACCCGTACCGGATACGTAT+CGG | - | chr3_4:11638149-11638168 | Msa0490200:intron | 50.0% | |
| ATCCGATACGTATCCGGTAC+GGG | + | chr3_4:11638154-11638173 | None:intergenic | 50.0% | |
| TGCGAGTATCCGTGGAGTAT+TGG | + | chr3_4:11638178-11638197 | None:intergenic | 50.0% | |
| CGATACTCCGCAGATACACA+AGG | - | chr3_4:11638267-11638286 | Msa0490200:CDS | 50.0% | |
| GTACGATACGATACGGGTAC+GGG | + | chr3_4:11638625-11638644 | None:intergenic | 50.0% | |
| GGTACGATACGATACGGGTA+CGG | + | chr3_4:11638626-11638645 | None:intergenic | 50.0% | |
| GTACGGGTACGATACGATAC+GGG | + | chr3_4:11638631-11638650 | None:intergenic | 50.0% | |
| GGTACGGGTACGATACGATA+CGG | + | chr3_4:11638632-11638651 | None:intergenic | 50.0% | |
| GTATCGTATCGTACCCGTAC+CGG | - | chr3_4:11638631-11638650 | Msa0490200:intron | 50.0% | |
| TGAAGCCCAGATACGGATAC+CGG | + | chr3_4:11638653-11638672 | None:intergenic | 50.0% | |
| CCGTATCTGGGCTTCATAGT+AGG | - | chr3_4:11638657-11638676 | Msa0490200:intron | 50.0% | |
| ! | GTCTGCATTTTCTCCTTCGC+CGG | - | chr3_4:11639279-11639298 | Msa0490200:intron | 50.0% |
| ! | TCTGCATTTTCTCCTTCGCC+GGG | - | chr3_4:11639280-11639299 | Msa0490200:intron | 50.0% |
| ATCGGGGAGTTGAGGCTTAA+AGG | + | chr3_4:11639320-11639339 | None:intergenic | 50.0% | |
| CTAAGGAAATCGGGGAGTTG+AGG | + | chr3_4:11639328-11639347 | None:intergenic | 50.0% | |
| TTTAGGAGGGGGAATTGGGT+AGG | + | chr3_4:11639365-11639384 | None:intergenic | 50.0% | |
| AGTACGACCTTGCAGCTTGA+AGG | + | chr3_4:11639891-11639910 | None:intergenic | 50.0% | |
| GTTCTCGCAAACGGTCTCAT+AGG | + | chr3_4:11640093-11640112 | None:intergenic | 50.0% | |
| GAGGGGATAGAATGATGGCT+TGG | - | chr3_4:11640424-11640443 | Msa0490200:intron | 50.0% | |
| ! | GGGATAGAATGATGGCTTGG+TGG | - | chr3_4:11640427-11640446 | Msa0490200:intron | 50.0% |
| !! | TAGAATGATGGCTTGGTGGC+TGG | - | chr3_4:11640431-11640450 | Msa0490200:intron | 50.0% |
| !! | AGAATGATGGCTTGGTGGCT+GGG | - | chr3_4:11640432-11640451 | Msa0490200:intron | 50.0% |
| AGCAGACTGATAAGGAGGTG+AGG | - | chr3_4:11640468-11640487 | Msa0490200:intron | 50.0% | |
| GCAGACTGATAAGGAGGTGA+GGG | - | chr3_4:11640469-11640488 | Msa0490200:intron | 50.0% | |
| GCGGATGTGGACAAAAGTCT+AGG | - | chr3_4:11641009-11641028 | Msa0490200:CDS | 50.0% | |
| ! | AAGCCAGTGGACTTGAGCAA+CGG | - | chr3_4:11641103-11641122 | Msa0490200:intron | 50.0% |
| ! | GGTCACCGGAAAGTTCTAGT+AGG | + | chr3_4:11641882-11641901 | None:intergenic | 50.0% |
| ACATTACCGTCATCCGGACG+GGG | + | chr3_4:11636824-11636843 | None:intergenic | 55.0% | |
| GAGCCCGATGCTGATCTTCA+AGG | - | chr3_4:11637206-11637225 | Msa0490200:intron | 55.0% | |
| ! | TCTTGGTGCAACAGGCCATG+AGG | - | chr3_4:11637357-11637376 | Msa0490200:intron | 55.0% |
| ! | CTTGGTGCAACAGGCCATGA+GGG | - | chr3_4:11637358-11637377 | Msa0490200:intron | 55.0% |
| GGAGCAGTCTTGGGTATGCT+TGG | - | chr3_4:11637959-11637978 | Msa0490200:intron | 55.0% | |
| ! | TGGGTATGCTTGGTGACTGC+TGG | - | chr3_4:11637969-11637988 | Msa0490200:intron | 55.0% |
| ! | GTACGGGTACGTCTCCGTTT+TGG | + | chr3_4:11638138-11638157 | None:intergenic | 55.0% |
| AAACGGAGACGTACCCGTAC+CGG | - | chr3_4:11638138-11638157 | Msa0490200:intron | 55.0% | |
| TGCGTATCTGCGAGTATCCG+TGG | + | chr3_4:11638186-11638205 | None:intergenic | 55.0% | |
| CCAGATACGGATACCGGTAC+GGG | + | chr3_4:11638647-11638666 | None:intergenic | 55.0% | |
| CCCAGATACGGATACCGGTA+CGG | + | chr3_4:11638648-11638667 | None:intergenic | 55.0% | |
| ! | CCGTACCGGTATCCGTATCT+GGG | - | chr3_4:11638645-11638664 | Msa0490200:intron | 55.0% |
| ! | CTGCATTTTCTCCTTCGCCG+GGG | - | chr3_4:11639281-11639300 | Msa0490200:intron | 55.0% |
| TATGGTTCAAACCCCGGCGA+AGG | + | chr3_4:11639295-11639314 | None:intergenic | 55.0% | |
| ATGGGGACCTTCAAGCTGCA+AGG | - | chr3_4:11639881-11639900 | Msa0490200:intron | 55.0% | |
| CGAAACAGGGCCTCAGTATG+TGG | - | chr3_4:11640315-11640334 | Msa0490200:CDS | 55.0% | |
| !! | GAATGATGGCTTGGTGGCTG+GGG | - | chr3_4:11640433-11640452 | Msa0490200:intron | 55.0% |
| GACAAGGTTGGGCAGCTTCT+TGG | - | chr3_4:11640551-11640570 | Msa0490200:intron | 55.0% | |
| CTACGGGTGCCTCTGATTAG+TGG | + | chr3_4:11640731-11640750 | None:intergenic | 55.0% | |
| AACGTGGAAATGCGCATGGG+TGG | + | chr3_4:11640883-11640902 | None:intergenic | 55.0% | |
| ! | AGCCAGTGGACTTGAGCAAC+GGG | - | chr3_4:11641104-11641123 | Msa0490200:intron | 55.0% |
| TACCCGTTGCTCAAGTCCAC+TGG | + | chr3_4:11641109-11641128 | None:intergenic | 55.0% | |
| TTGTGATCCTCTCCGGTCAC+CGG | + | chr3_4:11641896-11641915 | None:intergenic | 55.0% | |
| ! | CCCGTACCGGTATCCGTATC+TGG | - | chr3_4:11638644-11638663 | Msa0490200:intron | 60.0% |
| GAACTTTCCGGTGACCGGAG+AGG | - | chr3_4:11641886-11641905 | Msa0490200:intron | 60.0% | |
| !! | TGATGGCTTGGTGGCTGGGG+TGG | - | chr3_4:11640436-11640455 | Msa0490200:intron | 65.0% |
| !! | GATGGCTTGGTGGCTGGGGT+GGG | - | chr3_4:11640437-11640456 | Msa0490200:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 11635926 | 11642258 | 11635926 | ID=Msa0490200;Name=Msa0490200 |
| chr3_4 | mRNA | 11635926 | 11642258 | 11635926 | ID=Msa0490200-mRNA-1;Parent=Msa0490200;Name=Msa0490200-mRNA-1;_AED=0.07;_eAED=0.07;_QI=152|1|1|1|0.85|0.75|8|604|366 |
| chr3_4 | exon | 11635926 | 11636601 | 11635926 | ID=Msa0490200-mRNA-1:exon:3596;Parent=Msa0490200-mRNA-1 |
| chr3_4 | exon | 11637059 | 11637208 | 11637059 | ID=Msa0490200-mRNA-1:exon:3595;Parent=Msa0490200-mRNA-1 |
| chr3_4 | exon | 11638212 | 11638358 | 11638212 | ID=Msa0490200-mRNA-1:exon:3594;Parent=Msa0490200-mRNA-1 |
| chr3_4 | exon | 11638471 | 11638558 | 11638471 | ID=Msa0490200-mRNA-1:exon:3593;Parent=Msa0490200-mRNA-1 |
| chr3_4 | exon | 11640194 | 11640339 | 11640194 | ID=Msa0490200-mRNA-1:exon:3592;Parent=Msa0490200-mRNA-1 |
| chr3_4 | exon | 11640805 | 11641036 | 11640805 | ID=Msa0490200-mRNA-1:exon:3591;Parent=Msa0490200-mRNA-1 |
| chr3_4 | exon | 11641128 | 11641415 | 11641128 | ID=Msa0490200-mRNA-1:exon:3590;Parent=Msa0490200-mRNA-1 |
| chr3_4 | exon | 11642129 | 11642258 | 11642129 | ID=Msa0490200-mRNA-1:exon:3589;Parent=Msa0490200-mRNA-1 |
| chr3_4 | five_prime_UTR | 11642129 | 11642258 | 11642129 | ID=Msa0490200-mRNA-1:five_prime_utr;Parent=Msa0490200-mRNA-1 |
| chr3_4 | five_prime_UTR | 11641394 | 11641415 | 11641394 | ID=Msa0490200-mRNA-1:five_prime_utr;Parent=Msa0490200-mRNA-1 |
| chr3_4 | CDS | 11641128 | 11641393 | 11641128 | ID=Msa0490200-mRNA-1:cds;Parent=Msa0490200-mRNA-1 |
| chr3_4 | CDS | 11640805 | 11641036 | 11640805 | ID=Msa0490200-mRNA-1:cds;Parent=Msa0490200-mRNA-1 |
| chr3_4 | CDS | 11640194 | 11640339 | 11640194 | ID=Msa0490200-mRNA-1:cds;Parent=Msa0490200-mRNA-1 |
| chr3_4 | CDS | 11638471 | 11638558 | 11638471 | ID=Msa0490200-mRNA-1:cds;Parent=Msa0490200-mRNA-1 |
| chr3_4 | CDS | 11638212 | 11638358 | 11638212 | ID=Msa0490200-mRNA-1:cds;Parent=Msa0490200-mRNA-1 |
| chr3_4 | CDS | 11637059 | 11637208 | 11637059 | ID=Msa0490200-mRNA-1:cds;Parent=Msa0490200-mRNA-1 |
| chr3_4 | CDS | 11636530 | 11636601 | 11636530 | ID=Msa0490200-mRNA-1:cds;Parent=Msa0490200-mRNA-1 |
| chr3_4 | three_prime_UTR | 11635926 | 11636529 | 11635926 | ID=Msa0490200-mRNA-1:three_prime_utr;Parent=Msa0490200-mRNA-1 |
| Gene Sequence |
| Protein sequence |
