AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1128280

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1128280 MtrunA17_Chr7g0271871 98.496 532 8 0 1 532 1 532 0.0 1078
Msa1128280 MtrunA17_Chr1g0192541 88.910 532 59 0 1 532 1 532 0.0 989
Msa1128280 MtrunA17_Chr2g0294881 83.271 532 85 3 1 531 1 529 0.0 910
Msa1128280 MtrunA17_Chr4g0068051 71.985 539 132 6 1 531 1 528 0.0 783
Msa1128280 MtrunA17_Chr4g0074371 77.230 426 97 0 79 504 1 426 0.0 699
Msa1128280 MtrunA17_Chr4g0075701 71.163 430 122 2 70 498 3 431 0.0 635
Msa1128280 MtrunA17_Chr4g0075691 73.005 426 114 1 83 507 2 427 0.0 631
Msa1128280 MtrunA17_Chr8g0346871 71.868 423 118 1 110 532 15 436 0.0 622
Msa1128280 MtrunA17_Chr4g0074081 66.234 462 118 3 79 504 1 460 0.0 603
Msa1128280 MtrunA17_Chr1g0174791 70.000 300 87 3 208 504 1 300 3.57e-143 414
Msa1128280 MtrunA17_Chr1g0174791 26.047 215 145 6 108 314 30 238 2.11e-11 65.1
Msa1128280 MtrunA17_Chr7g0271821 45.027 553 247 13 1 499 1 550 8.37e-143 422
Msa1128280 MtrunA17_Chr7g0272761 45.749 494 234 12 14 496 15 485 2.72e-117 355
Msa1128280 MtrunA17_Chr7g0271831 48.821 424 191 10 85 504 7 408 6.11e-112 338
Msa1128280 MtrunA17_Chr4g0004921 60.949 274 57 4 261 532 1 226 5.55e-105 314
Msa1128280 MtrunA17_Chr4g0071961 72.297 148 41 0 364 511 2 149 3.74e-69 221
Msa1128280 MtrunA17_Chr4g0075651 74.286 140 36 0 367 506 9 148 6.87e-68 215
Msa1128280 MtrunA17_Chr1g0181541 30.116 518 317 15 14 499 10 514 9.70e-54 189
Msa1128280 MtrunA17_Chr4g0004931 60.417 144 43 1 110 253 11 140 2.15e-50 169
Msa1128280 MtrunA17_Chr4g0075601 56.028 141 49 1 364 491 1 141 6.06e-45 155
Msa1128280 MtrunA17_Chr4g0071971 68.571 105 32 1 263 366 10 114 3.23e-40 142
Msa1128280 MtrunA17_Chr4g0075621 62.376 101 38 0 79 179 1 101 3.83e-40 141
Msa1128280 MtrunA17_Chr4g0071981 60.976 82 28 1 83 160 2 83 2.60e-26 102
Msa1128280 MtrunA17_Chr4g0075631 82.353 51 9 0 219 269 1 51 1.85e-23 93.2
Msa1128280 MtrunA17_Chr4g0075641 40.909 154 61 6 276 408 2 146 3.08e-18 81.6
Msa1128280 MtrunA17_Chr4g0069541 61.667 60 23 0 322 381 55 114 6.35e-17 78.2
Msa1128280 MtrunA17_Chr7g0237931 27.519 258 180 6 135 392 349 599 5.31e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1128280 AT4G16143.2 80.224 536 99 2 1 531 1 534 0.0 868
Msa1128280 AT4G16143.1 80.224 536 99 2 1 531 1 534 0.0 868
Msa1128280 AT3G06720.1 79.252 535 105 4 1 532 1 532 0.0 864
Msa1128280 AT3G06720.2 79.252 535 105 4 1 532 1 532 0.0 864
Msa1128280 AT1G09270.2 73.383 541 130 6 1 531 1 537 0.0 785
Msa1128280 AT1G09270.1 73.383 541 130 6 1 531 1 537 0.0 785
Msa1128280 AT1G02690.1 69.630 540 152 5 1 531 1 537 0.0 771
Msa1128280 AT1G02690.2 69.501 541 152 6 1 531 1 538 0.0 766
Msa1128280 AT4G02150.1 70.315 539 143 5 1 531 1 530 0.0 761
Msa1128280 AT1G09270.3 77.193 456 99 3 79 531 2 455 0.0 705
Msa1128280 AT5G49310.1 63.872 501 174 4 1 501 1 494 0.0 633
Msa1128280 AT3G05720.1 64.300 493 157 6 13 497 9 490 0.0 613
Msa1128280 AT3G05720.2 64.300 493 157 6 13 497 9 490 0.0 613
Msa1128280 AT4G02150.2 71.325 415 106 3 1 408 1 409 0.0 603
Msa1128280 AT5G52000.1 52.381 420 187 6 79 497 14 421 1.16e-143 421
Msa1128280 AT5G49305.5 42.691 431 186 9 78 502 2 377 5.13e-100 307
Msa1128280 AT5G49305.3 42.691 431 186 9 78 502 2 377 5.13e-100 307
Msa1128280 AT5G49305.4 42.691 431 186 9 78 502 2 377 5.13e-100 307
Msa1128280 AT5G49305.1 42.691 431 186 9 78 502 2 377 5.13e-100 307
Msa1128280 AT5G49305.2 42.691 431 186 9 78 502 2 377 5.13e-100 307
Msa1128280 AT1G32880.1 63.265 147 49 3 363 507 40 183 8.57e-56 185
Msa1128280 AT5G03070.1 28.958 518 323 12 14 499 10 514 1.27e-51 184

Find 200 sgRNAs with CRISPR-Local

Find 388 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATTGTTCTTATGTTCTTTA+AGG 0.042859 7_3:+80154209 Msa1128280:three_prime_UTR
ACTTATGATTCTAGGTATTT+TGG 0.077981 7_3:+80154460 Msa1128280:three_prime_UTR
GCAGGGTTGAAGAGTGAAAT+TGG 0.223129 7_3:-80149605 None:intergenic
ATTATGTGGTGTTACAAATA+TGG 0.227939 7_3:+80154615 Msa1128280:three_prime_UTR
GATGTTCCTGCCGTGCCTTC+TGG 0.268271 7_3:+80153943 Msa1128280:CDS
TGGGAACAAGCAACAGATTC+AGG 0.277528 7_3:+80153267 Msa1128280:CDS
CCTCAGATTTATGATTCATT+AGG 0.289947 7_3:+80154582 Msa1128280:three_prime_UTR
AGTGATCATTTCAAGTGATT+TGG 0.291087 7_3:+80154373 Msa1128280:three_prime_UTR
GTGATTGATGCCAGTATAAT+TGG 0.305012 7_3:+80153380 Msa1128280:CDS
CCAGGTGATGCTTCTCAATC+AGG 0.305394 7_3:+80153901 Msa1128280:CDS
CACCTACCAGCCTTGGTTAC+AGG 0.310563 7_3:+80150538 Msa1128280:CDS
ATCTAATCTACTCGAGAAAA+AGG 0.313044 7_3:+80149962 Msa1128280:CDS
AAGGTTCAGCCTTGGTAAAT+AGG 0.318530 7_3:+80154228 Msa1128280:three_prime_UTR
TAAATATTAGAGTTTGCTTT+TGG 0.324152 7_3:+80154347 Msa1128280:three_prime_UTR
GATTGACGAAGCTGAGGGTT+TGG 0.332266 7_3:+80153774 Msa1128280:CDS
AGGGCTTGAAAACATCTTAA+AGG 0.333351 7_3:+80153693 Msa1128280:CDS
AGTATGGCAGTTCGACAGTT+GGG 0.344014 7_3:+80154166 Msa1128280:three_prime_UTR
GGCCGTTACTGGACCGGCTT+GGG 0.345727 7_3:+80154249 Msa1128280:three_prime_UTR
TTTCTTCCCTCCGATTCTTC+CGG 0.351570 7_3:-80149881 None:intergenic
TGCCAGTATAATTGGTCCTT+TGG 0.355834 7_3:+80153388 Msa1128280:CDS
GTTTCTGAGCATAGAAAGTT+TGG 0.355939 7_3:-80151541 None:intergenic
TGGATTCAACTTTAACTAGA+TGG 0.358677 7_3:+80153966 Msa1128280:exon
AGGAAAGGGGTTTATATTGC+AGG 0.365118 7_3:-80149623 None:intergenic
CAATCAGGGTTCAACTTTGG+TGG 0.368535 7_3:+80153916 Msa1128280:CDS
TGTCAGGCCGTGTGGGCATT+GGG 0.369223 7_3:+80151429 Msa1128280:intron
AGACTTCTTCATCATTTGAA+TGG 0.376843 7_3:-80152363 None:intergenic
GCATCAAGAAGGAAGCTTGC+TGG 0.387204 7_3:+80153224 Msa1128280:CDS
CTGTCAGGCCGTGTGGGCAT+TGG 0.388924 7_3:+80151428 Msa1128280:intron
GCTTTGACAAATATAGCTTC+TGG 0.398936 7_3:+80150916 Msa1128280:CDS
CAGCCTTGGTTACAGGAATC+TGG 0.399141 7_3:+80150545 Msa1128280:CDS
ATCAGTGAGGTTCTCCAGTA+TGG 0.404246 7_3:+80154150 Msa1128280:three_prime_UTR
CAACTGTCGAACTGCCATAC+TGG 0.405922 7_3:-80154164 None:intergenic
TCGGTTCTCGCGTTTGCGTT+AGG 0.408259 7_3:-80149780 None:intergenic
TGGAGCTTTGCTTCCTCTGT+TGG 0.414916 7_3:+80151500 Msa1128280:CDS
TAGTGATGATGTTCGTGAAC+AGG 0.421824 7_3:+80151011 Msa1128280:CDS
ATTGTGACAGTTTGTCTTGA+AGG 0.422808 7_3:+80153673 Msa1128280:CDS
AGATGCCGTGATCTTGTTCT+CGG 0.423165 7_3:+80151474 Msa1128280:CDS
TTTCGGAAGTTGCTTTCAAT+TGG 0.424061 7_3:+80150607 Msa1128280:CDS
TTGAGGCAACAACTCAGTTT+CGG 0.428701 7_3:+80150590 Msa1128280:CDS
AGCGTACCACTTATGATTCT+AGG 0.429517 7_3:+80154452 Msa1128280:three_prime_UTR
AAGATATGAAAGTGCCCAAC+AGG 0.430566 7_3:-80152395 None:intergenic
AAAGAGAGGAATGAAGGAAA+GGG 0.431348 7_3:-80149637 None:intergenic
GATGAAAGAATAGTATCATT+TGG 0.432245 7_3:-80154489 None:intergenic
TCTCAATCAGGGTTCAACTT+TGG 0.432782 7_3:+80153913 Msa1128280:CDS
TAGGATTTCTATTCATTATG+TGG 0.441663 7_3:+80154601 Msa1128280:three_prime_UTR
ACGCTGACTCCAACCTTAGC+AGG 0.452189 7_3:-80154434 None:intergenic
TGAAGATTCTCGAGACATAC+TGG 0.452976 7_3:+80153851 Msa1128280:CDS
GGGAACAGTTGGGTTGTGGC+CGG 0.459891 7_3:+80154303 Msa1128280:three_prime_UTR
CAGGGTTGAAGAGTGAAATT+GGG 0.460877 7_3:-80149604 None:intergenic
GACCAAAGGACCAATTATAC+TGG 0.463096 7_3:-80153390 None:intergenic
CAACACTGAGATTTATGAAA+AGG 0.463560 7_3:+80153825 Msa1128280:CDS
CTTGGATCGGAATAGAATTA+CGG 0.465542 7_3:-80149569 None:intergenic
CTGGCAAGTGCAGGAAGTGC+AGG 0.465783 7_3:-80152334 None:intergenic
GCACTTTCATATCTTTCTGA+TGG 0.469094 7_3:+80152403 Msa1128280:CDS
AGTCTTGACTGATGCCTGTT+GGG 0.470829 7_3:+80152381 Msa1128280:CDS
GTTGTAGTTTGAGGCAGCAT+GGG 0.471388 7_3:+80150894 Msa1128280:intron
AGACAAACTGTCACAATCCT+AGG 0.471935 7_3:-80153667 None:intergenic
TGGGCATTGGGAAATGTTGC+TGG 0.473260 7_3:+80151441 Msa1128280:CDS
GGACACTCTCAAACTTCTGC+AGG 0.478892 7_3:+80151571 Msa1128280:CDS
TTTCCAACTGTGCGTAGAGC+AGG 0.479185 7_3:-80152610 None:intergenic
CGTGATCTTGTTCTCGGTCA+TGG 0.484918 7_3:+80151480 Msa1128280:CDS
TAAATAGGCCGTTACTGGAC+CGG 0.490100 7_3:+80154243 Msa1128280:three_prime_UTR
AGGCCGTTACTGGACCGGCT+TGG 0.491523 7_3:+80154248 Msa1128280:three_prime_UTR
TGATAATAACATGCAGTTTG+AGG 0.493472 7_3:+80150573 Msa1128280:CDS
TTGTGACAGTTTGTCTTGAA+GGG 0.493627 7_3:+80153674 Msa1128280:CDS
CATACAACAGGGGAACAGTT+GGG 0.493946 7_3:+80154293 Msa1128280:three_prime_UTR
TACTCACATGTCCTGATCCT+AGG 0.494731 7_3:+80153650 Msa1128280:CDS
CAGATTCCTGTAACCAAGGC+TGG 0.496109 7_3:-80150544 None:intergenic
ATCATTTGAATGGATGAGAC+TGG 0.497906 7_3:-80152353 None:intergenic
GTTTGAAAAGAGAGGAATGA+AGG 0.499140 7_3:-80149643 None:intergenic
ATCAAGAGGTTCTTAAGAGA+AGG 0.500451 7_3:-80153184 None:intergenic
TCTAATATTTAACTCGGAAG+TGG 0.500946 7_3:-80154335 None:intergenic
AGTGAAATTGGGTATGAAAG+TGG 0.502202 7_3:-80149593 None:intergenic
TTGAAGCTGGTGTCTGTAGC+CGG 0.506023 7_3:+80152452 Msa1128280:CDS
GCATCACTGATGGCGTGAAT+CGG 0.506234 7_3:+80153740 Msa1128280:CDS
ATTGGGTATGAAAGTGGACT+TGG 0.510609 7_3:-80149587 None:intergenic
CAGGTGATGCTTCTCAATCA+GGG 0.510659 7_3:+80153902 Msa1128280:CDS
TGGTTGAGATCCGGAAGAAT+CGG 0.510945 7_3:+80149871 Msa1128280:CDS
TCGGAAGTGGCAAGAAAAGC+CGG 0.511762 7_3:-80154322 None:intergenic
CTTGAAAACATCTTAAAGGT+AGG 0.512889 7_3:+80153697 Msa1128280:CDS
AGGATAACTTGGTTGAGATC+CGG 0.514824 7_3:+80149862 Msa1128280:CDS
TAATGCACCCTTGACTTACC+AGG 0.515624 7_3:-80153612 None:intergenic
GGTGCAAATGACAAAATTCA+AGG 0.516277 7_3:+80152424 Msa1128280:CDS
CCTGATTGAGAAGCATCACC+TGG 0.519394 7_3:-80153901 None:intergenic
TTGAAAACATCTTAAAGGTA+GGG 0.520099 7_3:+80153698 Msa1128280:CDS
AAAAGAGAGGAATGAAGGAA+AGG 0.520713 7_3:-80149638 None:intergenic
ACAATTTCGAACATCACAGC+TGG 0.521802 7_3:+80153247 Msa1128280:CDS
GGAATAAGCACAGAAGGAGA+TGG 0.522068 7_3:-80152589 None:intergenic
AGTCCAGATTCCTGTAACCA+AGG 0.523005 7_3:-80150548 None:intergenic
AAAATTGGTCGACAGGTACC+TGG 0.523379 7_3:+80153594 Msa1128280:intron
GGCAATCTCAAATGCTACAT+CGG 0.524735 7_3:+80153460 Msa1128280:CDS
GTGGCGGTTGATGCGGAAGA+AGG 0.528330 7_3:+80149825 Msa1128280:CDS
AGAACGTAGCCCACCGATTG+AGG 0.529104 7_3:+80150721 Msa1128280:intron
ACCTGATCAAAAGCAGGTTG+TGG 0.529289 7_3:-80151600 None:intergenic
CTTTCATCATTAAAGTTGCA+AGG 0.530216 7_3:+80154504 Msa1128280:three_prime_UTR
GCAATCTCAAATGCTACATC+GGG 0.530239 7_3:+80153461 Msa1128280:CDS
GCTTGTATAACCTCCTCAAT+CGG 0.530974 7_3:-80150734 None:intergenic
GTATGGCAGTTCGACAGTTG+GGG 0.531650 7_3:+80154167 Msa1128280:three_prime_UTR
AGATTAGATTGAACTGATGC+AGG 0.532270 7_3:-80149948 None:intergenic
ACATACAACAGGGGAACAGT+TGG 0.532326 7_3:+80154292 Msa1128280:three_prime_UTR
AAGAGAGGAATGAAGGAAAG+GGG 0.535623 7_3:-80149636 None:intergenic
GTTCCTGCCGTGCCTTCTGG+TGG 0.536067 7_3:+80153946 Msa1128280:CDS
TCTCAGTGTTGTCATGACTC+TGG 0.536088 7_3:-80153813 None:intergenic
TGTTGTAGTTTGAGGCAGCA+TGG 0.536379 7_3:+80150893 Msa1128280:intron
GGAAAGGGGTTTATATTGCA+GGG 0.536788 7_3:-80149622 None:intergenic
GATGACGAGGCTATGCCTCC+AGG 0.538922 7_3:+80153883 Msa1128280:CDS
ACAGGGGAACAGTTGGGTTG+TGG 0.541391 7_3:+80154299 Msa1128280:three_prime_UTR
ACTGTCACAATCCTAGGATC+AGG 0.541962 7_3:-80153661 None:intergenic
GTTGGAACACCTACCAGCCT+TGG 0.541974 7_3:+80150531 Msa1128280:intron
AGAACAAGATCACGGCATCT+AGG 0.541982 7_3:-80151471 None:intergenic
CTTTATACCTGATCAAAAGC+AGG 0.544346 7_3:-80151606 None:intergenic
AAACACTAAGGTAGTAATTG+AGG 0.546623 7_3:+80150948 Msa1128280:CDS
AGAAGGTCGGAGACGGAGAG+AGG 0.547856 7_3:+80149842 Msa1128280:CDS
AACCCAAGCCGGTCCAGTAA+CGG 0.547933 7_3:-80154251 None:intergenic
TGTGGACTGTCAGGCCGTGT+GGG 0.549793 7_3:+80151422 Msa1128280:intron
AATCCACCAGAAGGCACGGC+AGG 0.551892 7_3:-80153949 None:intergenic
GTATCGATTCCGACGAACCT+CGG 0.552883 7_3:-80149799 None:intergenic
GAGTGAGGGTTTGAAAAGAG+AGG 0.556565 7_3:-80149651 None:intergenic
AGAAGGCACGGCAGGAACAT+CGG 0.557422 7_3:-80153941 None:intergenic
CAGTATGGCAGTTCGACAGT+TGG 0.558125 7_3:+80154165 Msa1128280:three_prime_UTR
AAAATACCTAGAATCATAAG+TGG 0.559223 7_3:-80154458 None:intergenic
TATCAAGAAGGAAGCAGCCT+GGG 0.559372 7_3:+80153439 Msa1128280:CDS
TGTTCTTTAAGGTTCAGCCT+TGG 0.560151 7_3:+80154220 Msa1128280:three_prime_UTR
GAGACGGAGAGAGGATAACT+TGG 0.560975 7_3:+80149851 Msa1128280:CDS
ATTCCTGCTCTACGCACAGT+TGG 0.563062 7_3:+80152607 Msa1128280:CDS
ATTCAAGGCGTAATTGAAGC+TGG 0.564008 7_3:+80152439 Msa1128280:CDS
ATCTCAAATGCTACATCGGG+TGG 0.565698 7_3:+80153464 Msa1128280:CDS
TGAAAACATCTTAAAGGTAG+GGG 0.566752 7_3:+80153699 Msa1128280:CDS
AGAGCAGGAATAAGCACAGA+AGG 0.573010 7_3:-80152595 None:intergenic
ATGCGGAAGAAGGTCGGAGA+CGG 0.573816 7_3:+80149835 Msa1128280:CDS
ATTGAGGAGGTTATACAAGC+TGG 0.574779 7_3:+80150737 Msa1128280:CDS
GACAGGTACCTGGTAAGTCA+AGG 0.575549 7_3:+80153604 Msa1128280:intron
AAGAAAGCTTGCAGAAGAAG+AGG 0.576091 7_3:+80149898 Msa1128280:CDS
TTGCAGAAGAAGAGGCGTGA+AGG 0.577170 7_3:+80149906 Msa1128280:CDS
AAGATAATAACCTGCAGCTG+TGG 0.578665 7_3:-80150803 None:intergenic
GACACTCTCAAACTTCTGCA+GGG 0.582716 7_3:+80151572 Msa1128280:CDS
ATTCACGCCATCAGTGATGC+CGG 0.582855 7_3:-80153737 None:intergenic
GATTCTCGAGACATACTGGT+TGG 0.583097 7_3:+80153855 Msa1128280:CDS
CGGTTGATGCGGAAGAAGGT+CGG 0.583578 7_3:+80149829 Msa1128280:CDS
TGTAGCATTTGAGATTGCCC+AGG 0.583736 7_3:-80153456 None:intergenic
AAGTCTTGACTGATGCCTGT+TGG 0.583997 7_3:+80152380 Msa1128280:CDS
TGGAACATCTGAAAACACTA+AGG 0.585901 7_3:+80150936 Msa1128280:CDS
TATGGCAGTTCGACAGTTGG+GGG 0.586736 7_3:+80154168 Msa1128280:three_prime_UTR
TGGATGAGACTGGCAAGTGC+AGG 0.586919 7_3:-80152343 None:intergenic
GTGTGGACTGTCAGGCCGTG+TGG 0.587261 7_3:+80151421 Msa1128280:intron
ATATCAAGAAGGAAGCAGCC+TGG 0.587274 7_3:+80153438 Msa1128280:CDS
GTTGAATCCACCAGAAGGCA+CGG 0.589872 7_3:-80153953 None:intergenic
TCTCGAGACATACTGGTTGG+AGG 0.590172 7_3:+80153858 Msa1128280:CDS
GAATAAGCACAGAAGGAGAT+GGG 0.590390 7_3:-80152588 None:intergenic
AGTGAAAGAGCGAAGCAGAA+AGG 0.590626 7_3:-80149673 None:intergenic
ACAGTTGGAAATATTGTCAC+TGG 0.591504 7_3:+80152622 Msa1128280:CDS
GGTTCGTCGGAATCGATACA+AGG 0.595021 7_3:+80149803 Msa1128280:CDS
ACGCGAGAACCGAGGTTCGT+CGG 0.595335 7_3:+80149790 Msa1128280:CDS
TGTATAACCTCCTCAATCGG+TGG 0.596128 7_3:-80150731 None:intergenic
TGCTGAGTTTGATATCAAGA+AGG 0.598148 7_3:+80153427 Msa1128280:CDS
TTTACAATCGGTTTAACGAA+CGG 0.598850 7_3:-80149742 None:intergenic
CAGTGTTGTCATGACTCTGG+AGG 0.600196 7_3:-80153810 None:intergenic
AACATTTCCCAATGCCCACA+CGG 0.600269 7_3:-80151436 None:intergenic
GTATGAAAGTGGACTTGGAT+CGG 0.602378 7_3:-80149582 None:intergenic
ATACTGGAGAACCTCACTGA+TGG 0.603112 7_3:-80154148 None:intergenic
ATTAAAGTTGCAAGGAACCT+CGG 0.606361 7_3:+80154512 Msa1128280:three_prime_UTR
AGCGAAGCAGAAAGGAGTGA+GGG 0.608076 7_3:-80149665 None:intergenic
ATACAAGGTGGCGGTTGATG+CGG 0.609006 7_3:+80149818 Msa1128280:CDS
GTATAACCTCCTCAATCGGT+GGG 0.609405 7_3:-80150730 None:intergenic
TTGAGATCCGGAAGAATCGG+AGG 0.610209 7_3:+80149874 Msa1128280:CDS
ACAGTAGAAGCTCAACAAGC+CGG 0.611612 7_3:-80152471 None:intergenic
ACTAAGGTAGTAATTGAGGC+AGG 0.612619 7_3:+80150952 Msa1128280:CDS
CCTAATGAATCATAAATCTG+AGG 0.614833 7_3:-80154582 None:intergenic
GCAAACTCTAATATTTAACT+CGG 0.618670 7_3:-80154341 None:intergenic
GAGCGAAGCAGAAAGGAGTG+AGG 0.618742 7_3:-80149666 None:intergenic
ACTGATGCAGGCATCTGCTG+AGG 0.637302 7_3:-80149936 None:intergenic
CTGGTTGGAGGAAGATGACG+AGG 0.640896 7_3:+80153870 Msa1128280:CDS
TAAGAGAAGGAAGAACTCGA+TGG 0.641399 7_3:-80153171 None:intergenic
ACAGGTACCTGGTAAGTCAA+GGG 0.643325 7_3:+80153605 Msa1128280:intron
TGAAATGATTGACGAAGCTG+AGG 0.643868 7_3:+80153768 Msa1128280:CDS
CAATTTCGAACATCACAGCT+GGG 0.644095 7_3:+80153248 Msa1128280:CDS
ACATGTGAGTAGATCACACA+AGG 0.644923 7_3:-80153638 None:intergenic
TTCCTGTAACCAAGGCTGGT+AGG 0.648193 7_3:-80150540 None:intergenic
TGGAGATGACTTGCAGACAC+AGG 0.648488 7_3:+80152642 Msa1128280:CDS
CTATGCTCAGAAACGCCACA+TGG 0.649323 7_3:+80151550 Msa1128280:CDS
TCATTCAATTGCGCCAACAG+AGG 0.649416 7_3:-80151513 None:intergenic
AATCACTTGAAATGATCACT+AGG 0.649903 7_3:-80154370 None:intergenic
TGTTCACGAACATCATCACT+AGG 0.652458 7_3:-80151009 None:intergenic
CATCATCACTAGGAGAAGCA+AGG 0.654239 7_3:-80150999 None:intergenic
ACACTCTCAAACTTCTGCAG+GGG 0.658228 7_3:+80151573 Msa1128280:CDS
TTAAAGTTGAATCCACCAGA+AGG 0.661830 7_3:-80153958 None:intergenic
TCGGAATCGATACAAGGTGG+CGG 0.663630 7_3:+80149809 Msa1128280:CDS
TGAGATCCGGAAGAATCGGA+GGG 0.664863 7_3:+80149875 Msa1128280:CDS
ACGTAGCCCACCGATTGAGG+AGG 0.667976 7_3:+80150724 Msa1128280:CDS
CATGACCGAGAACAAGATCA+CGG 0.670358 7_3:-80151479 None:intergenic
CAGTAACGGCCTATTTACCA+AGG 0.682650 7_3:-80154237 None:intergenic
TAACGCAAACGCGAGAACCG+AGG 0.690745 7_3:+80149782 Msa1128280:CDS
ATGGCAGTTCGACAGTTGGG+GGG 0.690929 7_3:+80154169 Msa1128280:three_prime_UTR
TAAGCACAGAAGGAGATGGG+TGG 0.711417 7_3:-80152585 None:intergenic
GAAATGATTGACGAAGCTGA+GGG 0.713200 7_3:+80153769 Msa1128280:CDS
GATTGAGAAGCATCACCTGG+AGG 0.716664 7_3:-80153898 None:intergenic
ATCAAGAACTCAATAAAACG+AGG 0.733523 7_3:-80150767 None:intergenic
TCGTCGGAATCGATACAAGG+TGG 0.735526 7_3:+80149806 Msa1128280:CDS
CATGTGAGTAGATCACACAA+GGG 0.757129 7_3:-80153637 None:intergenic
GAAGTTTGAGAGTGTCCATG+TGG 0.759250 7_3:-80151565 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTATTATTATTATAACTCA+TGG + chr7_3:80150269-80150288 Msa1128280:intron 10.0%
!!! TTTTTGTATACAATTTTTTA+AGG + chr7_3:80150667-80150686 Msa1128280:intron 10.0%
!!! TTTTGTATACAATTTTTTAA+GGG + chr7_3:80150668-80150687 Msa1128280:intron 10.0%
!! TAGTTTATATTGAAAAATTA+TGG + chr7_3:80151917-80151936 Msa1128280:intron 10.0%
!!! TGAAATTCTAATTATTATTT+TGG + chr7_3:80152552-80152571 Msa1128280:intron 10.0%
!!! TATTATTTTACTTTTGATTT+TGG + chr7_3:80153107-80153126 Msa1128280:intron 10.0%
!! CAGATATAAACAAATATTAA+AGG - chr7_3:80151780-80151799 None:intergenic 15.0%
!! AATAAGAAAATTCAAACAAA+TGG - chr7_3:80151833-80151852 None:intergenic 15.0%
!!! TTTTATAACTATTAATCAAG+AGG - chr7_3:80153201-80153220 None:intergenic 15.0%
!!! TGTCATAATCTTTTTAAAAT+TGG + chr7_3:80153579-80153598 Msa1128280:intron 15.0%
!!! TTGTTGTGTTTTTTTTTTTT+TGG + chr7_3:80154031-80154050 Msa1128280:intron 15.0%
!! CAGTAAAAAAAAAAAAAAAC+AGG - chr7_3:80154555-80154574 None:intergenic 15.0%
!!! AATTGAGAAATTGATAATAC+TGG + chr7_3:80150067-80150086 Msa1128280:intron 20.0%
!!! CAAAATTGATGATAGTAATT+AGG + chr7_3:80150196-80150215 Msa1128280:intron 20.0%
!! ACAAGGTTTGATTAATATTA+TGG + chr7_3:80150462-80150481 Msa1128280:intron 20.0%
!! CTATTGCATAAAATAAAACA+AGG - chr7_3:80150829-80150848 None:intergenic 20.0%
!!! ACCATATAAATTTTACTGAT+AGG - chr7_3:80151082-80151101 None:intergenic 20.0%
!!! TATGGTTTCTTACTTTTTAT+TGG + chr7_3:80151096-80151115 Msa1128280:intron 20.0%
!!! ATGGTTTCTTACTTTTTATT+GGG + chr7_3:80151097-80151116 Msa1128280:intron 20.0%
!! CTTCATTAACAAAAAAAGAA+GGG - chr7_3:80151128-80151147 None:intergenic 20.0%
!! ACTTCATTAACAAAAAAAGA+AGG - chr7_3:80151129-80151148 None:intergenic 20.0%
!!! TTTTTGTTAATGAAGTTAAC+CGG + chr7_3:80151133-80151152 Msa1128280:intron 20.0%
!!! TGATAATTTTTCAACATACA+AGG - chr7_3:80151878-80151897 None:intergenic 20.0%
!! TGAAATTAAAATTAAACGCA+TGG + chr7_3:80152772-80152791 Msa1128280:intron 20.0%
!!! TTATAAAAAAAGCATCAAGA+AGG + chr7_3:80153213-80153232 Msa1128280:CDS 20.0%
!! TTAAAAAGATTATGACATCT+CGG - chr7_3:80153576-80153595 None:intergenic 20.0%
!!! ATGGTATTCATGTTTTATTA+AGG + chr7_3:80153985-80154004 Msa1128280:three_prime_UTR 20.0%
!! GGTAATCTATATGTTATATT+TGG + chr7_3:80154006-80154025 Msa1128280:intron 20.0%
!!! TAAATATTAGAGTTTGCTTT+TGG + chr7_3:80154347-80154366 Msa1128280:three_prime_UTR 20.0%
!! AAAAAAAAAAAAACAGGACA+GGG - chr7_3:80154549-80154568 None:intergenic 20.0%
!! AAAAAAAAAAAAAACAGGAC+AGG - chr7_3:80154550-80154569 None:intergenic 20.0%
! AACGTAGTAAAGTAGAAAAT+CGG - chr7_3:80150026-80150045 None:intergenic 25.0%
! CGTTGGATAAGTTATTTATT+AGG + chr7_3:80150042-80150061 Msa1128280:intron 25.0%
!! GAAATTGATAATACTGGATT+AGG + chr7_3:80150073-80150092 Msa1128280:intron 25.0%
!! ATATATTGATAGTAGCGATT+AGG + chr7_3:80150105-80150124 Msa1128280:intron 25.0%
! TGAATCAAAACAACATAAAC+AGG - chr7_3:80150230-80150249 None:intergenic 25.0%
!!! AGCAGTGTTTGTTAATTTTA+AGG + chr7_3:80150348-80150367 Msa1128280:intron 25.0%
!!! GCAGTGTTTGTTAATTTTAA+GGG + chr7_3:80150349-80150368 Msa1128280:intron 25.0%
! GGTTTGATTAATATTATGGT+AGG + chr7_3:80150466-80150485 Msa1128280:intron 25.0%
!!! ACAATTTTTTAAGGGACATT+TGG + chr7_3:80150676-80150695 Msa1128280:intron 25.0%
!! TTTTATTGAGTTCTTGATGA+GGG + chr7_3:80150772-80150791 Msa1128280:CDS 25.0%
! GCCTATCAGTAAAATTTATA+TGG + chr7_3:80151078-80151097 Msa1128280:intron 25.0%
!!! GTTCACTTTGATTTTAGATT+TGG + chr7_3:80151188-80151207 Msa1128280:intron 25.0%
!! AAATTTCTTGTTCAAGTTCT+AGG - chr7_3:80151752-80151771 None:intergenic 25.0%
!! AGAACTTGAACAAGAAATTT+TGG + chr7_3:80151752-80151771 Msa1128280:intron 25.0%
! ACAACACAGGTTAAATAATA+TGG - chr7_3:80152025-80152044 None:intergenic 25.0%
! TTTCACATCATAATAACCAA+GGG - chr7_3:80152537-80152556 None:intergenic 25.0%
! ATTTCACATCATAATAACCA+AGG - chr7_3:80152538-80152557 None:intergenic 25.0%
! AATTAAAATTAAACGCATGG+AGG + chr7_3:80152775-80152794 Msa1128280:intron 25.0%
!!! TTGATTTTGGTTTGTGTTAA+TGG + chr7_3:80153120-80153139 Msa1128280:intron 25.0%
!!! TGATTTTGGTTTGTGTTAAT+GGG + chr7_3:80153121-80153140 Msa1128280:intron 25.0%
! CTTGATTCTTGAAAATTTAC+AGG + chr7_3:80153355-80153374 Msa1128280:intron 25.0%
! TATAAAACCAACAAAATCAC+CGG - chr7_3:80153540-80153559 None:intergenic 25.0%
! TTGAAAACATCTTAAAGGTA+GGG + chr7_3:80153698-80153717 Msa1128280:CDS 25.0%
! CATTGTTCTTATGTTCTTTA+AGG + chr7_3:80154209-80154228 Msa1128280:three_prime_UTR 25.0%
! GCAAACTCTAATATTTAACT+CGG - chr7_3:80154344-80154363 None:intergenic 25.0%
! AAAATACCTAGAATCATAAG+TGG - chr7_3:80154461-80154480 None:intergenic 25.0%
!! ACTTATGATTCTAGGTATTT+TGG + chr7_3:80154460-80154479 Msa1128280:three_prime_UTR 25.0%
!! CTTATGATTCTAGGTATTTT+GGG + chr7_3:80154461-80154480 Msa1128280:three_prime_UTR 25.0%
! GATGAAAGAATAGTATCATT+TGG - chr7_3:80154492-80154511 None:intergenic 25.0%
! TAGGATTTCTATTCATTATG+TGG + chr7_3:80154601-80154620 Msa1128280:three_prime_UTR 25.0%
!!! ATTATGTGGTGTTACAAATA+TGG + chr7_3:80154615-80154634 Msa1128280:three_prime_UTR 25.0%
!! GTGTTACAAATATGGTTTTT+GGG + chr7_3:80154623-80154642 Msa1128280:three_prime_UTR 25.0%
!!! AATTTGTTGCACACTATTTT+TGG - chr7_3:80154660-80154679 None:intergenic 25.0%
! TTTACAATCGGTTTAACGAA+CGG - chr7_3:80149745-80149764 None:intergenic 30.0%
! ATACGACATCGTTTTACAAT+CGG - chr7_3:80149757-80149776 None:intergenic 30.0%
ATCTAATCTACTCGAGAAAA+AGG + chr7_3:80149962-80149981 Msa1128280:CDS 30.0%
! GATTTTCTACTTTACTACGT+TGG + chr7_3:80150025-80150044 Msa1128280:intron 30.0%
AATTGAGAAATTGATACTGC+TGG + chr7_3:80150130-80150149 Msa1128280:intron 30.0%
AAATGAAGCATAACAAGTAG+GGG - chr7_3:80150321-80150340 None:intergenic 30.0%
CAAATGAAGCATAACAAGTA+GGG - chr7_3:80150322-80150341 None:intergenic 30.0%
TCAAATGAAGCATAACAAGT+AGG - chr7_3:80150323-80150342 None:intergenic 30.0%
AACATGTTCATGATATTCAC+TGG + chr7_3:80150399-80150418 Msa1128280:intron 30.0%
TGATAATAACATGCAGTTTG+AGG + chr7_3:80150573-80150592 Msa1128280:CDS 30.0%
ATCAAGAACTCAATAAAACG+AGG - chr7_3:80150770-80150789 None:intergenic 30.0%
!! GTTTTATTGAGTTCTTGATG+AGG + chr7_3:80150771-80150790 Msa1128280:CDS 30.0%
TTACTGTATGTTGTAGTTTG+AGG + chr7_3:80150885-80150904 Msa1128280:intron 30.0%
AAACACTAAGGTAGTAATTG+AGG + chr7_3:80150948-80150967 Msa1128280:CDS 30.0%
TTACTGATAGGCAAAAACAA+AGG - chr7_3:80151070-80151089 None:intergenic 30.0%
ACACAAGTATAAAGTCCATT+TGG + chr7_3:80151697-80151716 Msa1128280:intron 30.0%
TAGTGGCATCTTGTAAATAA+AGG + chr7_3:80151970-80151989 Msa1128280:intron 30.0%
AATAAAGGTGGTCAAATTTG+TGG + chr7_3:80151985-80152004 Msa1128280:intron 30.0%
! AATTTGTGGTTTGTATGTGA+AGG + chr7_3:80151999-80152018 Msa1128280:intron 30.0%
AGACTTCTTCATCATTTGAA+TGG - chr7_3:80152366-80152385 None:intergenic 30.0%
AGAGAAATAGTAATACACAC+TGG + chr7_3:80152731-80152750 Msa1128280:intron 30.0%
GCGAATTATAATGAGGAAAT+TGG - chr7_3:80152910-80152929 None:intergenic 30.0%
TGACAAAGCGAATTATAATG+AGG - chr7_3:80152917-80152936 None:intergenic 30.0%
TTCTATTGCTGCTAATCATA+AGG - chr7_3:80153053-80153072 None:intergenic 30.0%
!!! GATTTTGGTTTGTGTTAATG+GGG + chr7_3:80153122-80153141 Msa1128280:intron 30.0%
ATCTGTGTTATCTTTGCATT+TGG + chr7_3:80153312-80153331 Msa1128280:intron 30.0%
CTTAAATTTACAATGTTCCC+CGG + chr7_3:80153518-80153537 Msa1128280:intron 30.0%
ATAAAACCAACAAAATCACC+GGG - chr7_3:80153539-80153558 None:intergenic 30.0%
!!! TCTTTTTAAAATTGGTCGAC+AGG + chr7_3:80153587-80153606 Msa1128280:intron 30.0%
CTTGAAAACATCTTAAAGGT+AGG + chr7_3:80153697-80153716 Msa1128280:CDS 30.0%
TGAAAACATCTTAAAGGTAG+GGG + chr7_3:80153699-80153718 Msa1128280:CDS 30.0%
CAACACTGAGATTTATGAAA+AGG + chr7_3:80153825-80153844 Msa1128280:CDS 30.0%
TGGATTCAACTTTAACTAGA+TGG + chr7_3:80153966-80153985 Msa1128280:exon 30.0%
TGTTGAATTTCTTTAACTGC+AGG + chr7_3:80154112-80154131 Msa1128280:intron 30.0%
TCTAATATTTAACTCGGAAG+TGG - chr7_3:80154338-80154357 None:intergenic 30.0%
AATCACTTGAAATGATCACT+AGG - chr7_3:80154373-80154392 None:intergenic 30.0%
! AGTGATCATTTCAAGTGATT+TGG + chr7_3:80154373-80154392 Msa1128280:three_prime_UTR 30.0%
!!! TTTCGTTATTTTTCCTGCTA+AGG + chr7_3:80154421-80154440 Msa1128280:three_prime_UTR 30.0%
CTTTCATCATTAAAGTTGCA+AGG + chr7_3:80154504-80154523 Msa1128280:three_prime_UTR 30.0%
CCTAATGAATCATAAATCTG+AGG - chr7_3:80154585-80154604 None:intergenic 30.0%
CCTCAGATTTATGATTCATT+AGG + chr7_3:80154582-80154601 Msa1128280:three_prime_UTR 30.0%
!! GGTGTTACAAATATGGTTTT+TGG + chr7_3:80154622-80154641 Msa1128280:three_prime_UTR 30.0%
CTTGGATCGGAATAGAATTA+CGG - chr7_3:80149572-80149591 None:intergenic 35.0%
AGTGAAATTGGGTATGAAAG+TGG - chr7_3:80149596-80149615 None:intergenic 35.0%
AAAGAGAGGAATGAAGGAAA+GGG - chr7_3:80149640-80149659 None:intergenic 35.0%
AAAAGAGAGGAATGAAGGAA+AGG - chr7_3:80149641-80149660 None:intergenic 35.0%
GTTTGAAAAGAGAGGAATGA+AGG - chr7_3:80149646-80149665 None:intergenic 35.0%
AGATTAGATTGAACTGATGC+AGG - chr7_3:80149951-80149970 None:intergenic 35.0%
GAAATTGATACTGCTGGATT+AGG + chr7_3:80150136-80150155 Msa1128280:intron 35.0%
TGTTGTTATCATTCTGCAGT+TGG + chr7_3:80150513-80150532 Msa1128280:intron 35.0%
! TTTCGGAAGTTGCTTTCAAT+TGG + chr7_3:80150607-80150626 Msa1128280:CDS 35.0%
GCTTTGACAAATATAGCTTC+TGG + chr7_3:80150916-80150935 Msa1128280:CDS 35.0%
TGGAACATCTGAAAACACTA+AGG + chr7_3:80150936-80150955 Msa1128280:CDS 35.0%
! ACAAAGGCACAAATTGCATA+TGG - chr7_3:80151054-80151073 None:intergenic 35.0%
TTGTTAATGAAGTTAACCGG+AGG + chr7_3:80151136-80151155 Msa1128280:intron 35.0%
!! GTATGCTGTTTCTAGATTCT+AGG + chr7_3:80151214-80151233 Msa1128280:intron 35.0%
ATGAGATAGATCACACTAGA+TGG - chr7_3:80151375-80151394 None:intergenic 35.0%
GTTTCTGAGCATAGAAAGTT+TGG - chr7_3:80151544-80151563 None:intergenic 35.0%
CTTTATACCTGATCAAAAGC+AGG - chr7_3:80151609-80151628 None:intergenic 35.0%
CACACAGATGAGTAATTACA+AGG + chr7_3:80151666-80151685 Msa1128280:intron 35.0%
AAGTCCATTTGGTACACAAA+TGG + chr7_3:80151708-80151727 Msa1128280:intron 35.0%
AGTCCATTTGGTACACAAAT+GGG + chr7_3:80151709-80151728 Msa1128280:intron 35.0%
!! TTTCAACATACAAGGTGTTG+AGG - chr7_3:80151870-80151889 None:intergenic 35.0%
TGGCATCTTGTAAATAAAGG+TGG + chr7_3:80151973-80151992 Msa1128280:intron 35.0%
CAAAAAGACTGGTAAAACCA+AGG - chr7_3:80152225-80152244 None:intergenic 35.0%
AGTCAGCAAAACAAAAAGAC+TGG - chr7_3:80152236-80152255 None:intergenic 35.0%
ATCATTTGAATGGATGAGAC+TGG - chr7_3:80152356-80152375 None:intergenic 35.0%
GCACTTTCATATCTTTCTGA+TGG + chr7_3:80152403-80152422 Msa1128280:CDS 35.0%
GGTGCAAATGACAAAATTCA+AGG + chr7_3:80152424-80152443 Msa1128280:CDS 35.0%
ACAGTTGGAAATATTGTCAC+TGG + chr7_3:80152622-80152641 Msa1128280:CDS 35.0%
AGGAAATTTGTGCAATTGGA+CGG - chr7_3:80152975-80152994 None:intergenic 35.0%
TGAGAGGAAATTTGTGCAAT+TGG - chr7_3:80152979-80152998 None:intergenic 35.0%
AGTGCAACAGAATATACACA+TGG - chr7_3:80153012-80153031 None:intergenic 35.0%
TATTGCTGCTAATCATAAGG+AGG - chr7_3:80153050-80153069 None:intergenic 35.0%
ATCAAGAGGTTCTTAAGAGA+AGG - chr7_3:80153187-80153206 None:intergenic 35.0%
GTGATTGATGCCAGTATAAT+TGG + chr7_3:80153380-80153399 Msa1128280:CDS 35.0%
!!! TTTTGAAGCAAGTTGACCAA+AGG - chr7_3:80153407-80153426 None:intergenic 35.0%
TGCTGAGTTTGATATCAAGA+AGG + chr7_3:80153427-80153446 Msa1128280:CDS 35.0%
TCTCATGAACAACTCAAGTA+TGG + chr7_3:80153488-80153507 Msa1128280:intron 35.0%
CGGGGAACATTGTAAATTTA+AGG - chr7_3:80153520-80153539 None:intergenic 35.0%
TAAAACCAACAAAATCACCG+GGG - chr7_3:80153538-80153557 None:intergenic 35.0%
ATTGTGACAGTTTGTCTTGA+AGG + chr7_3:80153673-80153692 Msa1128280:CDS 35.0%
TTGTGACAGTTTGTCTTGAA+GGG + chr7_3:80153674-80153693 Msa1128280:CDS 35.0%
AGGGCTTGAAAACATCTTAA+AGG + chr7_3:80153693-80153712 Msa1128280:CDS 35.0%
TTAAAGTTGAATCCACCAGA+AGG - chr7_3:80153961-80153980 None:intergenic 35.0%
ACATGATGTCAACACAATAC+AGG - chr7_3:80154095-80154114 None:intergenic 35.0%
!!! TTAACTGCAGGTTTTTTAGC+TGG + chr7_3:80154124-80154143 Msa1128280:intron 35.0%
!!! GTTATTTTTCCTGCTAAGGT+TGG + chr7_3:80154425-80154444 Msa1128280:three_prime_UTR 35.0%
ATTAAAGTTGCAAGGAACCT+CGG + chr7_3:80154512-80154531 Msa1128280:three_prime_UTR 35.0%
! GTATGAAAGTGGACTTGGAT+CGG - chr7_3:80149585-80149604 None:intergenic 40.0%
! ATTGGGTATGAAAGTGGACT+TGG - chr7_3:80149590-80149609 None:intergenic 40.0%
CAGGGTTGAAGAGTGAAATT+GGG - chr7_3:80149607-80149626 None:intergenic 40.0%
GGAAAGGGGTTTATATTGCA+GGG - chr7_3:80149625-80149644 None:intergenic 40.0%
AGGAAAGGGGTTTATATTGC+AGG - chr7_3:80149626-80149645 None:intergenic 40.0%
AAGAGAGGAATGAAGGAAAG+GGG - chr7_3:80149639-80149658 None:intergenic 40.0%
AGGATAACTTGGTTGAGATC+CGG + chr7_3:80149862-80149881 Msa1128280:CDS 40.0%
AAGAAAGCTTGCAGAAGAAG+AGG + chr7_3:80149898-80149917 Msa1128280:CDS 40.0%
CCTTGTAGCTACATACAGAT+GGG - chr7_3:80150448-80150467 None:intergenic 40.0%
ACCTTGTAGCTACATACAGA+TGG - chr7_3:80150449-80150468 None:intergenic 40.0%
TTGAGGCAACAACTCAGTTT+CGG + chr7_3:80150590-80150609 Msa1128280:CDS 40.0%
GCTTGTATAACCTCCTCAAT+CGG - chr7_3:80150737-80150756 None:intergenic 40.0%
ATTGAGGAGGTTATACAAGC+TGG + chr7_3:80150737-80150756 Msa1128280:CDS 40.0%
AAGATAATAACCTGCAGCTG+TGG - chr7_3:80150806-80150825 None:intergenic 40.0%
ACTAAGGTAGTAATTGAGGC+AGG + chr7_3:80150952-80150971 Msa1128280:CDS 40.0%
GCAAGGAGCTTCACAAAAAT+TGG - chr7_3:80150985-80151004 None:intergenic 40.0%
TGTTCACGAACATCATCACT+AGG - chr7_3:80151012-80151031 None:intergenic 40.0%
! TAGTGATGATGTTCGTGAAC+AGG + chr7_3:80151011-80151030 Msa1128280:CDS 40.0%
AGTCAAGCTAAACATTCCTC+CGG - chr7_3:80151155-80151174 None:intergenic 40.0%
CACTATTATGCATGCAAGTG+AGG + chr7_3:80151252-80151271 Msa1128280:intron 40.0%
ACATTGCCTTGCAATAGTGT+TGG + chr7_3:80151348-80151367 Msa1128280:intron 40.0%
AACATCTTTCCTGTGTTGTG+TGG + chr7_3:80151404-80151423 Msa1128280:intron 40.0%
AAGCCCATTTGTGTACCAAA+TGG - chr7_3:80151715-80151734 None:intergenic 40.0%
GCAGCTATGTTGTTCTTTAG+TGG + chr7_3:80151953-80151972 Msa1128280:intron 40.0%
TTTCAGTCACATGACAACAC+AGG - chr7_3:80152038-80152057 None:intergenic 40.0%
TGTGTTGTCATGTGACTGAA+AGG + chr7_3:80152037-80152056 Msa1128280:intron 40.0%
AACAGCCTCTTGTGTATAAC+AGG + chr7_3:80152080-80152099 Msa1128280:intron 40.0%
ACAGCCTCTTGTGTATAACA+GGG + chr7_3:80152081-80152100 Msa1128280:intron 40.0%
CGTACAATACACCAAATGGT+GGG + chr7_3:80152112-80152131 Msa1128280:intron 40.0%
CTAATTGTTAGCTCCATCCT+TGG + chr7_3:80152205-80152224 Msa1128280:intron 40.0%
AAGACTGGTAAAACCAAGGA+TGG - chr7_3:80152221-80152240 None:intergenic 40.0%
!! AAGATATGAAAGTGCCCAAC+AGG - chr7_3:80152398-80152417 None:intergenic 40.0%
ATTCAAGGCGTAATTGAAGC+TGG + chr7_3:80152439-80152458 Msa1128280:CDS 40.0%
! CTGTTCAAAGTTGTTTCCCT+TGG + chr7_3:80152518-80152537 Msa1128280:intron 40.0%
GAATAAGCACAGAAGGAGAT+GGG - chr7_3:80152591-80152610 None:intergenic 40.0%
GAAACTGTGAAGGAGATAGT+GGG - chr7_3:80152946-80152965 None:intergenic 40.0%
AGAAACTGTGAAGGAGATAG+TGG - chr7_3:80152947-80152966 None:intergenic 40.0%
GAAATTTGTGCAATTGGACG+GGG - chr7_3:80152973-80152992 None:intergenic 40.0%
GGAAATTTGTGCAATTGGAC+GGG - chr7_3:80152974-80152993 None:intergenic 40.0%
TCATAAGGAGGAAAGAGACA+TGG - chr7_3:80153038-80153057 None:intergenic 40.0%
ATCAAGCACATGATTCGTGA+TGG - chr7_3:80153087-80153106 None:intergenic 40.0%
TAAGAGAAGGAAGAACTCGA+TGG - chr7_3:80153174-80153193 None:intergenic 40.0%
ACAATTTCGAACATCACAGC+TGG + chr7_3:80153247-80153266 Msa1128280:CDS 40.0%
CAATTTCGAACATCACAGCT+GGG + chr7_3:80153248-80153267 Msa1128280:CDS 40.0%
! ACAGATTCAGGTTTGTGCAT+TGG + chr7_3:80153279-80153298 Msa1128280:intron 40.0%
! CAGATTCAGGTTTGTGCATT+GGG + chr7_3:80153280-80153299 Msa1128280:intron 40.0%
TGCCAGTATAATTGGTCCTT+TGG + chr7_3:80153388-80153407 Msa1128280:CDS 40.0%
GACCAAAGGACCAATTATAC+TGG - chr7_3:80153393-80153412 None:intergenic 40.0%
GGCAATCTCAAATGCTACAT+CGG + chr7_3:80153460-80153479 Msa1128280:CDS 40.0%
GCAATCTCAAATGCTACATC+GGG + chr7_3:80153461-80153480 Msa1128280:CDS 40.0%
CATGTGAGTAGATCACACAA+GGG - chr7_3:80153640-80153659 None:intergenic 40.0%
ACATGTGAGTAGATCACACA+AGG - chr7_3:80153641-80153660 None:intergenic 40.0%
AGACAAACTGTCACAATCCT+AGG - chr7_3:80153670-80153689 None:intergenic 40.0%
TGAAATGATTGACGAAGCTG+AGG + chr7_3:80153768-80153787 Msa1128280:CDS 40.0%
GAAATGATTGACGAAGCTGA+GGG + chr7_3:80153769-80153788 Msa1128280:CDS 40.0%
TGAAGATTCTCGAGACATAC+TGG + chr7_3:80153851-80153870 Msa1128280:CDS 40.0%
TCTCAATCAGGGTTCAACTT+TGG + chr7_3:80153913-80153932 Msa1128280:CDS 40.0%
ACAATACAGGATAACACGAG+AGG - chr7_3:80154082-80154101 None:intergenic 40.0%
!! TGTTCTTTAAGGTTCAGCCT+TGG + chr7_3:80154220-80154239 Msa1128280:three_prime_UTR 40.0%
AAGGTTCAGCCTTGGTAAAT+AGG + chr7_3:80154228-80154247 Msa1128280:three_prime_UTR 40.0%
!!! TGGCTGGTTTTACATACAAC+AGG + chr7_3:80154281-80154300 Msa1128280:three_prime_UTR 40.0%
!!! GGCTGGTTTTACATACAACA+GGG + chr7_3:80154282-80154301 Msa1128280:three_prime_UTR 40.0%
!!! GCTGGTTTTACATACAACAG+GGG + chr7_3:80154283-80154302 Msa1128280:three_prime_UTR 40.0%
AGCGTACCACTTATGATTCT+AGG + chr7_3:80154452-80154471 Msa1128280:three_prime_UTR 40.0%
ACAGGGTAAAAAAAACTCCG+AGG - chr7_3:80154532-80154551 None:intergenic 40.0%
GCAGGGTTGAAGAGTGAAAT+TGG - chr7_3:80149608-80149627 None:intergenic 45.0%
GAGTGAGGGTTTGAAAAGAG+AGG - chr7_3:80149654-80149673 None:intergenic 45.0%
AGTGAAAGAGCGAAGCAGAA+AGG - chr7_3:80149676-80149695 None:intergenic 45.0%
TGGTTGAGATCCGGAAGAAT+CGG + chr7_3:80149871-80149890 Msa1128280:CDS 45.0%
TTTCTTCCCTCCGATTCTTC+CGG - chr7_3:80149884-80149903 None:intergenic 45.0%
! GTAGGGGTGTGCATAAAAAC+TGG - chr7_3:80150305-80150324 None:intergenic 45.0%
CCCATCTGTATGTAGCTACA+AGG + chr7_3:80150445-80150464 Msa1128280:intron 45.0%
AGTCCAGATTCCTGTAACCA+AGG - chr7_3:80150551-80150570 None:intergenic 45.0%
GTATAACCTCCTCAATCGGT+GGG - chr7_3:80150733-80150752 None:intergenic 45.0%
TGTATAACCTCCTCAATCGG+TGG - chr7_3:80150734-80150753 None:intergenic 45.0%
! TGTTGTAGTTTGAGGCAGCA+TGG + chr7_3:80150893-80150912 Msa1128280:intron 45.0%
! GTTGTAGTTTGAGGCAGCAT+GGG + chr7_3:80150894-80150913 Msa1128280:intron 45.0%
CATCATCACTAGGAGAAGCA+AGG - chr7_3:80151002-80151021 None:intergenic 45.0%
GATGGTCCAACACTATTGCA+AGG - chr7_3:80151357-80151376 None:intergenic 45.0%
AACATTTCCCAATGCCCACA+CGG - chr7_3:80151439-80151458 None:intergenic 45.0%
AGAACAAGATCACGGCATCT+AGG - chr7_3:80151474-80151493 None:intergenic 45.0%
AGATGCCGTGATCTTGTTCT+CGG + chr7_3:80151474-80151493 Msa1128280:CDS 45.0%
CATGACCGAGAACAAGATCA+CGG - chr7_3:80151482-80151501 None:intergenic 45.0%
TCATTCAATTGCGCCAACAG+AGG - chr7_3:80151516-80151535 None:intergenic 45.0%
!! GAAGTTTGAGAGTGTCCATG+TGG - chr7_3:80151568-80151587 None:intergenic 45.0%
GACACTCTCAAACTTCTGCA+GGG + chr7_3:80151572-80151591 Msa1128280:CDS 45.0%
ACACTCTCAAACTTCTGCAG+GGG + chr7_3:80151573-80151592 Msa1128280:CDS 45.0%
ACCTGATCAAAAGCAGGTTG+TGG - chr7_3:80151603-80151622 None:intergenic 45.0%
! ATACACAAGAGGCTGTTTCC+AGG - chr7_3:80152077-80152096 None:intergenic 45.0%
CTTGCCCTGTTATACACAAG+AGG - chr7_3:80152088-80152107 None:intergenic 45.0%
CTCTTGTGTATAACAGGGCA+AGG + chr7_3:80152086-80152105 Msa1128280:intron 45.0%
GCTGCGTACAATACACCAAA+TGG + chr7_3:80152108-80152127 Msa1128280:intron 45.0%
GCGTACAATACACCAAATGG+TGG + chr7_3:80152111-80152130 Msa1128280:intron 45.0%
AGCATGAAAAAGGGACAACC+CGG - chr7_3:80152178-80152197 None:intergenic 45.0%
AGCTCTGCGAGCATGAAAAA+GGG - chr7_3:80152187-80152206 None:intergenic 45.0%
! TAGCTCTGCGAGCATGAAAA+AGG - chr7_3:80152188-80152207 None:intergenic 45.0%
TGCAGGTTTAACCTGTAAGC+AGG - chr7_3:80152320-80152339 None:intergenic 45.0%
AAGTCTTGACTGATGCCTGT+TGG + chr7_3:80152380-80152399 Msa1128280:CDS 45.0%
AGTCTTGACTGATGCCTGTT+GGG + chr7_3:80152381-80152400 Msa1128280:CDS 45.0%
ACAGTAGAAGCTCAACAAGC+CGG - chr7_3:80152474-80152493 None:intergenic 45.0%
! GCTTGTTGAGCTTCTACTGT+GGG + chr7_3:80152474-80152493 Msa1128280:intron 45.0%
GGAATAAGCACAGAAGGAGA+TGG - chr7_3:80152592-80152611 None:intergenic 45.0%
AGAGCAGGAATAAGCACAGA+AGG - chr7_3:80152598-80152617 None:intergenic 45.0%
! AACTAGCAGAGCTGATTCAC+CGG + chr7_3:80152868-80152887 Msa1128280:intron 45.0%
TGGTAGCTTAAGAACTGAGC+CGG - chr7_3:80152890-80152909 None:intergenic 45.0%
!! GTGAAGGAGATAGTGGGAAA+TGG - chr7_3:80152940-80152959 None:intergenic 45.0%
ACATGGCTGCAAGATATGAG+AGG - chr7_3:80152995-80153014 None:intergenic 45.0%
!! GTGTTAATGGGGTGCTTTTC+TGG + chr7_3:80153133-80153152 Msa1128280:intron 45.0%
TGGGAACAAGCAACAGATTC+AGG + chr7_3:80153267-80153286 Msa1128280:CDS 45.0%
ATATCAAGAAGGAAGCAGCC+TGG + chr7_3:80153438-80153457 Msa1128280:CDS 45.0%
TATCAAGAAGGAAGCAGCCT+GGG + chr7_3:80153439-80153458 Msa1128280:CDS 45.0%
! TGTAGCATTTGAGATTGCCC+AGG - chr7_3:80153459-80153478 None:intergenic 45.0%
ATCTCAAATGCTACATCGGG+TGG + chr7_3:80153464-80153483 Msa1128280:CDS 45.0%
! ATGTTCCCCGGTGATTTTGT+TGG + chr7_3:80153530-80153549 Msa1128280:intron 45.0%
AAAATTGGTCGACAGGTACC+TGG + chr7_3:80153594-80153613 Msa1128280:intron 45.0%
ACAGGTACCTGGTAAGTCAA+GGG + chr7_3:80153605-80153624 Msa1128280:intron 45.0%
TAATGCACCCTTGACTTACC+AGG - chr7_3:80153615-80153634 None:intergenic 45.0%
TACTCACATGTCCTGATCCT+AGG + chr7_3:80153650-80153669 Msa1128280:CDS 45.0%
ACTGTCACAATCCTAGGATC+AGG - chr7_3:80153664-80153683 None:intergenic 45.0%
GGGGAAGCTGATAAAAATGC+CGG + chr7_3:80153718-80153737 Msa1128280:CDS 45.0%
AAAAATGCCGGCATCACTGA+TGG + chr7_3:80153730-80153749 Msa1128280:CDS 45.0%
TCTCAGTGTTGTCATGACTC+TGG - chr7_3:80153816-80153835 None:intergenic 45.0%
GATTCTCGAGACATACTGGT+TGG + chr7_3:80153855-80153874 Msa1128280:CDS 45.0%
CAGGTGATGCTTCTCAATCA+GGG + chr7_3:80153902-80153921 Msa1128280:CDS 45.0%
CAATCAGGGTTCAACTTTGG+TGG + chr7_3:80153916-80153935 Msa1128280:CDS 45.0%
!! TTTTAGCTGGTCCATCAGTG+AGG + chr7_3:80154137-80154156 Msa1128280:three_prime_UTR 45.0%
ATACTGGAGAACCTCACTGA+TGG - chr7_3:80154151-80154170 None:intergenic 45.0%
ATCAGTGAGGTTCTCCAGTA+TGG + chr7_3:80154150-80154169 Msa1128280:three_prime_UTR 45.0%
AGTATGGCAGTTCGACAGTT+GGG + chr7_3:80154166-80154185 Msa1128280:three_prime_UTR 45.0%
CAGTAACGGCCTATTTACCA+AGG - chr7_3:80154240-80154259 None:intergenic 45.0%
CTTGGTAAATAGGCCGTTAC+TGG + chr7_3:80154238-80154257 Msa1128280:three_prime_UTR 45.0%
TAAATAGGCCGTTACTGGAC+CGG + chr7_3:80154243-80154262 Msa1128280:three_prime_UTR 45.0%
!!! ACCGGCTTGGGTTTTTGAAA+TGG + chr7_3:80154261-80154280 Msa1128280:three_prime_UTR 45.0%
GCCATTTCAAAAACCCAAGC+CGG - chr7_3:80154265-80154284 None:intergenic 45.0%
!!! GCTTGGGTTTTTGAAATGGC+TGG + chr7_3:80154265-80154284 Msa1128280:three_prime_UTR 45.0%
ACATACAACAGGGGAACAGT+TGG + chr7_3:80154292-80154311 Msa1128280:three_prime_UTR 45.0%
CATACAACAGGGGAACAGTT+GGG + chr7_3:80154293-80154312 Msa1128280:three_prime_UTR 45.0%
AGCGAAGCAGAAAGGAGTGA+GGG - chr7_3:80149668-80149687 None:intergenic 50.0%
!! GTATCGATTCCGACGAACCT+CGG - chr7_3:80149802-80149821 None:intergenic 50.0%
GGTTCGTCGGAATCGATACA+AGG + chr7_3:80149803-80149822 Msa1128280:CDS 50.0%
TCGTCGGAATCGATACAAGG+TGG + chr7_3:80149806-80149825 Msa1128280:CDS 50.0%
TCGGAATCGATACAAGGTGG+CGG + chr7_3:80149809-80149828 Msa1128280:CDS 50.0%
! ATACAAGGTGGCGGTTGATG+CGG + chr7_3:80149818-80149837 Msa1128280:CDS 50.0%
GAGACGGAGAGAGGATAACT+TGG + chr7_3:80149851-80149870 Msa1128280:CDS 50.0%
TTGAGATCCGGAAGAATCGG+AGG + chr7_3:80149874-80149893 Msa1128280:CDS 50.0%
TGAGATCCGGAAGAATCGGA+GGG + chr7_3:80149875-80149894 Msa1128280:CDS 50.0%
! TTGCAGAAGAAGAGGCGTGA+AGG + chr7_3:80149906-80149925 Msa1128280:CDS 50.0%
TTCCTGTAACCAAGGCTGGT+AGG - chr7_3:80150543-80150562 None:intergenic 50.0%
CAGATTCCTGTAACCAAGGC+TGG - chr7_3:80150547-80150566 None:intergenic 50.0%
CAGCCTTGGTTACAGGAATC+TGG + chr7_3:80150545-80150564 Msa1128280:CDS 50.0%
! GGAAGATTTTCCACAGCTGC+AGG + chr7_3:80150793-80150812 Msa1128280:CDS 50.0%
!! TGGGCATTGGGAAATGTTGC+TGG + chr7_3:80151441-80151460 Msa1128280:CDS 50.0%
CGTGATCTTGTTCTCGGTCA+TGG + chr7_3:80151480-80151499 Msa1128280:CDS 50.0%
TGGAGCTTTGCTTCCTCTGT+TGG + chr7_3:80151500-80151519 Msa1128280:CDS 50.0%
CTATGCTCAGAAACGCCACA+TGG + chr7_3:80151550-80151569 Msa1128280:CDS 50.0%
GGACACTCTCAAACTTCTGC+AGG + chr7_3:80151571-80151590 Msa1128280:CDS 50.0%
!! GCCACAACCTGCTTTTGATC+AGG + chr7_3:80151599-80151618 Msa1128280:CDS 50.0%
AAGGTCACGTGTTCAAGTCC+TGG + chr7_3:80152056-80152075 Msa1128280:intron 50.0%
TAACCTGTAAGCAGGCAGGA+TGG - chr7_3:80152312-80152331 None:intergenic 50.0%
GGTTTAACCTGTAAGCAGGC+AGG - chr7_3:80152316-80152335 None:intergenic 50.0%
TTGAAGCTGGTGTCTGTAGC+CGG + chr7_3:80152452-80152471 Msa1128280:CDS 50.0%
!! GGCTTGTTGAGCTTCTACTG+TGG + chr7_3:80152473-80152492 Msa1128280:intron 50.0%
TAAGCACAGAAGGAGATGGG+TGG - chr7_3:80152588-80152607 None:intergenic 50.0%
ATTCCTGCTCTACGCACAGT+TGG + chr7_3:80152607-80152626 Msa1128280:CDS 50.0%
TTTCCAACTGTGCGTAGAGC+AGG - chr7_3:80152613-80152632 None:intergenic 50.0%
! TGGAGATGACTTGCAGACAC+AGG + chr7_3:80152642-80152661 Msa1128280:CDS 50.0%
GCATGGAGGAAATCGTCTGT+AGG + chr7_3:80152789-80152808 Msa1128280:intron 50.0%
ACGGGGCATAGAAACTGTGA+AGG - chr7_3:80152956-80152975 None:intergenic 50.0%
!! CTCGATGGTTGATGATGACC+TGG - chr7_3:80153159-80153178 None:intergenic 50.0%
GCATCAAGAAGGAAGCTTGC+TGG + chr7_3:80153224-80153243 Msa1128280:CDS 50.0%
GACAGGTACCTGGTAAGTCA+AGG + chr7_3:80153604-80153623 Msa1128280:intron 50.0%
ATTCACGCCATCAGTGATGC+CGG - chr7_3:80153740-80153759 None:intergenic 50.0%
! GCATCACTGATGGCGTGAAT+CGG + chr7_3:80153740-80153759 Msa1128280:CDS 50.0%
GATTGACGAAGCTGAGGGTT+TGG + chr7_3:80153774-80153793 Msa1128280:CDS 50.0%
CAGTGTTGTCATGACTCTGG+AGG - chr7_3:80153813-80153832 None:intergenic 50.0%
! TCTCGAGACATACTGGTTGG+AGG + chr7_3:80153858-80153877 Msa1128280:CDS 50.0%
!! GATTGAGAAGCATCACCTGG+AGG - chr7_3:80153901-80153920 None:intergenic 50.0%
!! CCTGATTGAGAAGCATCACC+TGG - chr7_3:80153904-80153923 None:intergenic 50.0%
CCAGGTGATGCTTCTCAATC+AGG + chr7_3:80153901-80153920 Msa1128280:CDS 50.0%
GTTGAATCCACCAGAAGGCA+CGG - chr7_3:80153956-80153975 None:intergenic 50.0%
CAACTGTCGAACTGCCATAC+TGG - chr7_3:80154167-80154186 None:intergenic 50.0%
CAGTATGGCAGTTCGACAGT+TGG + chr7_3:80154165-80154184 Msa1128280:three_prime_UTR 50.0%
GTATGGCAGTTCGACAGTTG+GGG + chr7_3:80154167-80154186 Msa1128280:three_prime_UTR 50.0%
TATGGCAGTTCGACAGTTGG+GGG + chr7_3:80154168-80154187 Msa1128280:three_prime_UTR 50.0%
TCGGAAGTGGCAAGAAAAGC+CGG - chr7_3:80154325-80154344 None:intergenic 50.0%
GAGCGAAGCAGAAAGGAGTG+AGG - chr7_3:80149669-80149688 None:intergenic 55.0%
TCGGTTCTCGCGTTTGCGTT+AGG - chr7_3:80149783-80149802 None:intergenic 55.0%
TAACGCAAACGCGAGAACCG+AGG + chr7_3:80149782-80149801 Msa1128280:CDS 55.0%
! CGGTTGATGCGGAAGAAGGT+CGG + chr7_3:80149829-80149848 Msa1128280:CDS 55.0%
ATGCGGAAGAAGGTCGGAGA+CGG + chr7_3:80149835-80149854 Msa1128280:CDS 55.0%
ACTGATGCAGGCATCTGCTG+AGG - chr7_3:80149939-80149958 None:intergenic 55.0%
GTTGGAACACCTACCAGCCT+TGG + chr7_3:80150531-80150550 Msa1128280:intron 55.0%
CACCTACCAGCCTTGGTTAC+AGG + chr7_3:80150538-80150557 Msa1128280:CDS 55.0%
!! TCAATCGGTGGGCTACGTTC+TGG - chr7_3:80150722-80150741 None:intergenic 55.0%
! AGAACGTAGCCCACCGATTG+AGG + chr7_3:80150721-80150740 Msa1128280:intron 55.0%
CCTGACAGTCCACACAACAC+AGG - chr7_3:80151416-80151435 None:intergenic 55.0%
! CCTGTGTTGTGTGGACTGTC+AGG + chr7_3:80151413-80151432 Msa1128280:intron 55.0%
CTTGAGCTCCCGCATATGCA+GGG - chr7_3:80152151-80152170 None:intergenic 55.0%
ACTTGAGCTCCCGCATATGC+AGG - chr7_3:80152152-80152171 None:intergenic 55.0%
CTACCATCCTGCCTGCTTAC+AGG + chr7_3:80152306-80152325 Msa1128280:intron 55.0%
TGGATGAGACTGGCAAGTGC+AGG - chr7_3:80152346-80152365 None:intergenic 55.0%
!! AATGGGGTGCTTTTCTGGCC+AGG + chr7_3:80153138-80153157 Msa1128280:intron 55.0%
CTGGTTGGAGGAAGATGACG+AGG + chr7_3:80153870-80153889 Msa1128280:CDS 55.0%
! AGAAGGCACGGCAGGAACAT+CGG - chr7_3:80153944-80153963 None:intergenic 55.0%
ATGGCAGTTCGACAGTTGGG+GGG + chr7_3:80154169-80154188 Msa1128280:three_prime_UTR 55.0%
AACCCAAGCCGGTCCAGTAA+CGG - chr7_3:80154254-80154273 None:intergenic 55.0%
! ACAGGGGAACAGTTGGGTTG+TGG + chr7_3:80154299-80154318 Msa1128280:three_prime_UTR 55.0%
!! ACGCTGACTCCAACCTTAGC+AGG - chr7_3:80154437-80154456 None:intergenic 55.0%
ACGCGAGAACCGAGGTTCGT+CGG + chr7_3:80149790-80149809 Msa1128280:CDS 60.0%
! GTGGCGGTTGATGCGGAAGA+AGG + chr7_3:80149825-80149844 Msa1128280:CDS 60.0%
AGAAGGTCGGAGACGGAGAG+AGG + chr7_3:80149842-80149861 Msa1128280:CDS 60.0%
! ACGTAGCCCACCGATTGAGG+AGG + chr7_3:80150724-80150743 Msa1128280:CDS 60.0%
! TGTGGACTGTCAGGCCGTGT+GGG + chr7_3:80151422-80151441 Msa1128280:intron 60.0%
TGTCAGGCCGTGTGGGCATT+GGG + chr7_3:80151429-80151448 Msa1128280:intron 60.0%
! CAAATGGTGGGACCCCTTCC+CGG + chr7_3:80152124-80152143 Msa1128280:intron 60.0%
CATATGCAGGGTCCGGGAAG+GGG - chr7_3:80152139-80152158 None:intergenic 60.0%
GCATATGCAGGGTCCGGGAA+GGG - chr7_3:80152140-80152159 None:intergenic 60.0%
CTTCCCGGACCCTGCATATG+CGG + chr7_3:80152139-80152158 Msa1128280:intron 60.0%
TTCCCGGACCCTGCATATGC+GGG + chr7_3:80152140-80152159 Msa1128280:intron 60.0%
ATGCGGGAGCTCAAGTGCAC+CGG + chr7_3:80152156-80152175 Msa1128280:intron 60.0%
! CTGGCAAGTGCAGGAAGTGC+AGG - chr7_3:80152337-80152356 None:intergenic 60.0%
GATGACGAGGCTATGCCTCC+AGG + chr7_3:80153883-80153902 Msa1128280:CDS 60.0%
GATGTTCCTGCCGTGCCTTC+TGG + chr7_3:80153943-80153962 Msa1128280:CDS 60.0%
! AATCCACCAGAAGGCACGGC+AGG - chr7_3:80153952-80153971 None:intergenic 60.0%
! GGGAACAGTTGGGTTGTGGC+CGG + chr7_3:80154303-80154322 Msa1128280:three_prime_UTR 60.0%
! GTGTGGACTGTCAGGCCGTG+TGG + chr7_3:80151421-80151440 Msa1128280:intron 65.0%
CTGTCAGGCCGTGTGGGCAT+TGG + chr7_3:80151428-80151447 Msa1128280:intron 65.0%
CGGGAAGGGGTCCCACCATT+TGG - chr7_3:80152126-80152145 None:intergenic 65.0%
CGCATATGCAGGGTCCGGGA+AGG - chr7_3:80152141-80152160 None:intergenic 65.0%
CTCCCGCATATGCAGGGTCC+GGG - chr7_3:80152145-80152164 None:intergenic 65.0%
GCTCCCGCATATGCAGGGTC+CGG - chr7_3:80152146-80152165 None:intergenic 65.0%
TGCGGGAGCTCAAGTGCACC+GGG + chr7_3:80152157-80152176 Msa1128280:intron 65.0%
GTTCCTGCCGTGCCTTCTGG+TGG + chr7_3:80153946-80153965 Msa1128280:CDS 65.0%
AGGCCGTTACTGGACCGGCT+TGG + chr7_3:80154248-80154267 Msa1128280:three_prime_UTR 65.0%
! GGCCGTTACTGGACCGGCTT+GGG + chr7_3:80154249-80154268 Msa1128280:three_prime_UTR 65.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 80149569 80154681 80149569 ID=Msa1128280;Name=Msa1128280
chr7_3 mRNA 80149569 80154681 80149569 ID=Msa1128280-mRNA-1;Parent=Msa1128280;Name=Msa1128280-mRNA-1;_AED=0.07;_eAED=0.07;_QI=199|1|1|1|0.9|0.81|11|570|532
chr7_3 exon 80149569 80149983 80149569 ID=Msa1128280-mRNA-1:exon:22797;Parent=Msa1128280-mRNA-1
chr7_3 exon 80150532 80150628 80150532 ID=Msa1128280-mRNA-1:exon:22798;Parent=Msa1128280-mRNA-1
chr7_3 exon 80150723 80150814 80150723 ID=Msa1128280-mRNA-1:exon:22799;Parent=Msa1128280-mRNA-1
chr7_3 exon 80150901 80151032 80150901 ID=Msa1128280-mRNA-1:exon:22800;Parent=Msa1128280-mRNA-1
chr7_3 exon 80151435 80151620 80151435 ID=Msa1128280-mRNA-1:exon:22801;Parent=Msa1128280-mRNA-1
chr7_3 exon 80152328 80152491 80152328 ID=Msa1128280-mRNA-1:exon:22802;Parent=Msa1128280-mRNA-1
chr7_3 exon 80152585 80152663 80152585 ID=Msa1128280-mRNA-1:exon:22803;Parent=Msa1128280-mRNA-1
chr7_3 exon 80153160 80153288 80153160 ID=Msa1128280-mRNA-1:exon:22804;Parent=Msa1128280-mRNA-1
chr7_3 exon 80153377 80153504 80153377 ID=Msa1128280-mRNA-1:exon:22805;Parent=Msa1128280-mRNA-1
chr7_3 exon 80153609 80154006 80153609 ID=Msa1128280-mRNA-1:exon:22806;Parent=Msa1128280-mRNA-1
chr7_3 exon 80154134 80154681 80154134 ID=Msa1128280-mRNA-1:exon:22807;Parent=Msa1128280-mRNA-1
chr7_3 five_prime_UTR 80149569 80149767 80149569 ID=Msa1128280-mRNA-1:five_prime_utr;Parent=Msa1128280-mRNA-1
chr7_3 CDS 80149768 80149983 80149768 ID=Msa1128280-mRNA-1:cds;Parent=Msa1128280-mRNA-1
chr7_3 CDS 80150532 80150628 80150532 ID=Msa1128280-mRNA-1:cds;Parent=Msa1128280-mRNA-1
chr7_3 CDS 80150723 80150814 80150723 ID=Msa1128280-mRNA-1:cds;Parent=Msa1128280-mRNA-1
chr7_3 CDS 80150901 80151032 80150901 ID=Msa1128280-mRNA-1:cds;Parent=Msa1128280-mRNA-1
chr7_3 CDS 80151435 80151620 80151435 ID=Msa1128280-mRNA-1:cds;Parent=Msa1128280-mRNA-1
chr7_3 CDS 80152328 80152491 80152328 ID=Msa1128280-mRNA-1:cds;Parent=Msa1128280-mRNA-1
chr7_3 CDS 80152585 80152663 80152585 ID=Msa1128280-mRNA-1:cds;Parent=Msa1128280-mRNA-1
chr7_3 CDS 80153160 80153288 80153160 ID=Msa1128280-mRNA-1:cds;Parent=Msa1128280-mRNA-1
chr7_3 CDS 80153377 80153504 80153377 ID=Msa1128280-mRNA-1:cds;Parent=Msa1128280-mRNA-1
chr7_3 CDS 80153609 80153984 80153609 ID=Msa1128280-mRNA-1:cds;Parent=Msa1128280-mRNA-1
chr7_3 three_prime_UTR 80153985 80154006 80153985 ID=Msa1128280-mRNA-1:three_prime_utr;Parent=Msa1128280-mRNA-1
chr7_3 three_prime_UTR 80154134 80154681 80154134 ID=Msa1128280-mRNA-1:three_prime_utr;Parent=Msa1128280-mRNA-1
Gene Sequence

>Msa1128280

ATGTCGTATCGTCCTAACGCAAACGCGAGAACCGAGGTTCGTCGGAATCGATACAAGGTGGCGGTTGATGCGGAAGAAGGTCGGAGACGGAGAGAGGATAACTTGGTTGAGATCCGGAAGAATCGGAGGGAAGAAAGCTTGCAGAAGAAGAGGCGTGAAGGACTTCAACCTCAGCAGATGCCTGCATCAGTTCAATCTAATCTACTCGAGAAAAAGTTGGAACACCTACCAGCCTTGGTTACAGGAATCTGGACTGATGATAATAACATGCAGTTTGAGGCAACAACTCAGTTTCGGAAGTTGCTTTCAATTGAACGTAGCCCACCGATTGAGGAGGTTATACAAGCTGGTGTAGTTCCTCGTTTTATTGAGTTCTTGATGAGGGAAGATTTTCCACAGCTGCAGTTTGAGGCAGCATGGGCTTTGACAAATATAGCTTCTGGAACATCTGAAAACACTAAGGTAGTAATTGAGGCAGGTGCTGTACCAATTTTTGTGAAGCTCCTTGCTTCTCCTAGTGATGATGTTCGTGAACAGGCCGTGTGGGCATTGGGAAATGTTGCTGGAGATTCACCTAGATGCCGTGATCTTGTTCTCGGTCATGGAGCTTTGCTTCCTCTGTTGGCGCAATTGAATGAGCATGCCAAACTTTCTATGCTCAGAAACGCCACATGGACACTCTCAAACTTCTGCAGGGGAAAGCCACAACCTGCTTTTGATCAGGTTAAACCTGCACTTCCTGCACTTGCCAGTCTCATCCATTCAAATGATGAAGAAGTCTTGACTGATGCCTGTTGGGCACTTTCATATCTTTCTGATGGTGCAAATGACAAAATTCAAGGCGTAATTGAAGCTGGTGTCTGTAGCCGGCTTGTTGAGCTTCTACTCCACCCATCTCCTTCTGTGCTTATTCCTGCTCTACGCACAGTTGGAAATATTGTCACTGGAGATGACTTGCAGACACAGGTCATCATCAACCATCGAGTTCTTCCTTCTCTTAAGAACCTCTTGATTAATAGTTATAAAAAAAGCATCAAGAAGGAAGCTTGCTGGACAATTTCGAACATCACAGCTGGGAACAAGCAACAGATTCAGGATGTGATTGATGCCAGTATAATTGGTCCTTTGGTCAACTTGCTTCAAAATGCTGAGTTTGATATCAAGAAGGAAGCAGCCTGGGCAATCTCAAATGCTACATCGGGTGGATCTCATGAACAACTCAAGTACCTGGTAAGTCAAGGGTGCATTAAGCCCTTGTGTGATCTACTCACATGTCCTGATCCTAGGATTGTGACAGTTTGTCTTGAAGGGCTTGAAAACATCTTAAAGGTAGGGGAAGCTGATAAAAATGCCGGCATCACTGATGGCGTGAATCGGTATGCTGAAATGATTGACGAAGCTGAGGGTTTGGAGAAAATTGAGAACCTCCAGAGTCATGACAACACTGAGATTTATGAAAAGGCTGTGAAGATTCTCGAGACATACTGGTTGGAGGAAGATGACGAGGCTATGCCTCCAGGTGATGCTTCTCAATCAGGGTTCAACTTTGGTGGCTCCGATGTTCCTGCCGTGCCTTCTGGTGGATTCAACTTTAACTAG
Protein sequence

>Msa1128280

MSYRPNANARTEVRRNRYKVAVDAEEGRRRREDNLVEIRKNRREESLQKKRREGLQPQQMPASVQSNLLEKKLEHLPALVTGIWTDDNNMQFEATTQFRKLLSIERSPPIEEVIQAGVVPRFIEFLMREDFPQLQFEAAWALTNIASGTSENTKVVIEAGAVPIFVKLLASPSDDVREQAVWALGNVAGDSPRCRDLVLGHGALLPLLAQLNEHAKLSMLRNATWTLSNFCRGKPQPAFDQVKPALPALASLIHSNDEEVLTDACWALSYLSDGANDKIQGVIEAGVCSRLVELLLHPSPSVLIPALRTVGNIVTGDDLQTQVIINHRVLPSLKNLLINSYKKSIKKEACWTISNITAGNKQQIQDVIDASIIGPLVNLLQNAEFDIKKEAAWAISNATSGGSHEQLKYLVSQGCIKPLCDLLTCPDPRIVTVCLEGLENILKVGEADKNAGITDGVNRYAEMIDEAEGLEKIENLQSHDNTEIYEKAVKILETYWLEEDDEAMPPGDASQSGFNFGGSDVPAVPSGGFNFN*