Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0403480 | XP_003608963.2 | 98.737 | 475 | 6 | 0 | 1 | 475 | 1 | 475 | 0.0 | 964 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0403480 | sp|Q9XFS9|DXR_ARATH | 82.390 | 477 | 81 | 2 | 1 | 475 | 2 | 477 | 0.0 | 789 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0403480 | G7JNV7 | 98.737 | 475 | 6 | 0 | 1 | 475 | 1 | 475 | 0.0 | 964 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001550 | Msa0403480 | 0.811148 | 8.091703e-51 | -8.615850e-47 |
| Msa0054920 | Msa0403480 | -0.802348 | 5.854169e-49 | -8.615850e-47 |
| Msa0067590 | Msa0403480 | 0.816308 | 5.912436e-52 | -8.615850e-47 |
| Msa0081610 | Msa0403480 | 0.811682 | 6.195475e-51 | -8.615850e-47 |
| Msa0093950 | Msa0403480 | 0.835544 | 1.577667e-56 | -8.615850e-47 |
| Msa0094170 | Msa0403480 | 0.801624 | 8.246425e-49 | -8.615850e-47 |
| Msa0100290 | Msa0403480 | -0.808972 | 2.381509e-50 | -8.615850e-47 |
| Msa0113370 | Msa0403480 | 0.806906 | 6.552340e-50 | -8.615850e-47 |
| Msa0131270 | Msa0403480 | -0.832533 | 8.953904e-56 | -8.615850e-47 |
| Msa0136870 | Msa0403480 | 0.835138 | 1.997375e-56 | -8.615850e-47 |
| Msa0138990 | Msa0403480 | 0.802968 | 4.361024e-49 | -8.615850e-47 |
| Msa0140770 | Msa0403480 | 0.864213 | 1.429456e-64 | -8.615850e-47 |
| Msa0168770 | Msa0403480 | 0.811871 | 5.635865e-51 | -8.615850e-47 |
| Msa0178840 | Msa0403480 | 0.818074 | 2.369664e-52 | -8.615850e-47 |
| Msa0187590 | Msa0403480 | 0.849506 | 3.095023e-60 | -8.615850e-47 |
| Msa0217490 | Msa0403480 | 0.808977 | 2.375673e-50 | -8.615850e-47 |
| Msa0220400 | Msa0403480 | 0.852961 | 3.273552e-61 | -8.615850e-47 |
| Msa0234410 | Msa0403480 | 0.803053 | 4.187306e-49 | -8.615850e-47 |
| Msa0367540 | Msa0403480 | 0.817496 | 3.200074e-52 | -8.615850e-47 |
| Msa0373120 | Msa0403480 | 0.800168 | 1.635433e-48 | -8.615850e-47 |
| Msa0374340 | Msa0403480 | 0.814686 | 1.357708e-51 | -8.615850e-47 |
| Msa0374420 | Msa0403480 | 0.807832 | 4.168748e-50 | -8.615850e-47 |
| Msa0380400 | Msa0403480 | 0.806801 | 6.896726e-50 | -8.615850e-47 |
| Msa0383870 | Msa0403480 | 0.800458 | 1.427790e-48 | -8.615850e-47 |
| Msa0385930 | Msa0403480 | 0.846480 | 2.115737e-59 | -8.615850e-47 |
| Msa0403480 | Msa0415160 | 0.829868 | 4.046751e-55 | -8.615850e-47 |
| Msa0403480 | Msa0460170 | 0.812585 | 3.936669e-51 | -8.615850e-47 |
| Msa0403480 | Msa0476170 | 0.815459 | 9.144074e-52 | -8.615850e-47 |
| Msa0403480 | Msa0479760 | 0.865795 | 4.557318e-65 | -8.615850e-47 |
| Msa0403480 | Msa0500700 | 0.804638 | 1.962269e-49 | -8.615850e-47 |
| Msa0403480 | Msa0523430 | 0.875093 | 4.041289e-68 | -8.615850e-47 |
| Msa0403480 | Msa0523490 | 0.861615 | 9.061134e-64 | -8.615850e-47 |
| Msa0403480 | Msa0548650 | 0.808143 | 3.579376e-50 | -8.615850e-47 |
| Msa0403480 | Msa0559450 | 0.800367 | 1.489822e-48 | -8.615850e-47 |
| Msa0403480 | Msa0572550 | 0.811493 | 6.809925e-51 | -8.615850e-47 |
| Msa0403480 | Msa0576020 | 0.864111 | 1.538058e-64 | -8.615850e-47 |
| Msa0403480 | Msa0576080 | 0.889959 | 1.517886e-73 | -8.615850e-47 |
| Msa0403480 | Msa0576090 | 0.821123 | 4.772469e-53 | -8.615850e-47 |
| Msa0403480 | Msa0576120 | 0.893150 | 8.213851e-75 | -8.615850e-47 |
| Msa0403480 | Msa0589260 | 0.811452 | 6.952981e-51 | -8.615850e-47 |
| Msa0403480 | Msa0605040 | 0.802835 | 4.646974e-49 | -8.615850e-47 |
| Msa0403480 | Msa0622480 | 0.813365 | 2.656085e-51 | -8.615850e-47 |
| Msa0403480 | Msa0637930 | 0.841070 | 5.936570e-58 | -8.615850e-47 |
| Msa0403480 | Msa0638010 | 0.861199 | 1.213272e-63 | -8.615850e-47 |
| Msa0403480 | Msa0686950 | 0.861499 | 9.830317e-64 | -8.615850e-47 |
| Msa0403480 | Msa0781330 | 0.815680 | 8.167030e-52 | -8.615850e-47 |
| Msa0403480 | Msa0827520 | 0.855628 | 5.551483e-62 | -8.615850e-47 |
| Msa0403480 | Msa0833950 | 0.822739 | 2.016217e-53 | -8.615850e-47 |
| Msa0403480 | Msa0881530 | 0.839606 | 1.433299e-57 | -8.615850e-47 |
| Msa0403480 | Msa0982090 | 0.832635 | 8.449577e-56 | -8.615850e-47 |
| Msa0403480 | Msa1025040 | 0.803448 | 3.469568e-49 | -8.615850e-47 |
| Msa0403480 | Msa1039190 | 0.805790 | 1.125819e-49 | -8.615850e-47 |
| Msa0403480 | Msa1063590 | 0.835230 | 1.893473e-56 | -8.615850e-47 |
| Msa0403480 | Msa1067590 | 0.815000 | 1.156875e-51 | -8.615850e-47 |
| Msa0403480 | Msa1067980 | 0.815895 | 7.312176e-52 | -8.615850e-47 |
| Msa0403480 | Msa1083620 | 0.802934 | 4.432166e-49 | -8.615850e-47 |
| Msa0403480 | Msa1085610 | 0.892133 | 2.102649e-74 | -8.615850e-47 |
| Msa0403480 | Msa1087520 | 0.835755 | 1.394618e-56 | -8.615850e-47 |
| Msa0403480 | Msa1128610 | 0.853657 | 2.066785e-61 | -8.615850e-47 |
| Msa0403480 | Msa1129300 | 0.870277 | 1.647574e-66 | -8.615850e-47 |
| Msa0403480 | Msa1143810 | 0.833079 | 6.551977e-56 | -8.615850e-47 |
| Msa0403480 | Msa1152780 | 0.809667 | 1.689500e-50 | -8.615850e-47 |
| Msa0403480 | Msa1190100 | 0.829603 | 4.693395e-55 | -8.615850e-47 |
| Msa0403480 | Msa1209870 | 0.929169 | 1.020891e-92 | -8.615850e-47 |
| Msa0403480 | Msa1229670 | 0.818526 | 1.872041e-52 | -8.615850e-47 |
| Msa0403480 | Msa1258030 | 0.848402 | 6.272552e-60 | -8.615850e-47 |
| Msa0403480 | Msa1330540 | 0.946649 | 3.081230e-105 | -8.615850e-47 |
| Msa0403480 | Msa1342960 | 0.851553 | 8.235065e-61 | -8.615850e-47 |
| Msa0403480 | Msa1359400 | -0.802452 | 5.573594e-49 | -8.615850e-47 |
| Msa0403480 | Msa1361670 | 0.852470 | 4.521201e-61 | -8.615850e-47 |
| Msa0403480 | Msa1363820 | 0.815575 | 8.616843e-52 | -8.615850e-47 |
| Msa0403480 | Msa1364350 | 0.852463 | 4.539922e-61 | -8.615850e-47 |
| Msa0403480 | Msa1375610 | 0.812872 | 3.406263e-51 | -8.615850e-47 |
| Msa0403480 | Msa1375970 | 0.847298 | 1.263114e-59 | -8.615850e-47 |
| Msa0403480 | Msa1376550 | 0.816573 | 5.158963e-52 | -8.615850e-47 |
| Msa0403480 | Msa1382380 | 0.833619 | 4.804944e-56 | -8.615850e-47 |
| Msa0403480 | Msa1388030 | 0.802309 | 5.963081e-49 | -8.615850e-47 |
| Msa0403480 | Msa1411930 | 0.805196 | 1.500164e-49 | -8.615850e-47 |
| Msa0403480 | Msa1431510 | 0.846384 | 2.246825e-59 | -8.615850e-47 |
| Msa0403480 | Msa1457390 | 0.800030 | 1.745021e-48 | -8.615850e-47 |
| Msa0260580 | Msa0403480 | 0.808128 | 3.606004e-50 | -8.615850e-47 |
| Msa0260640 | Msa0403480 | 0.800261 | 1.565564e-48 | -8.615850e-47 |
| Msa0310730 | Msa0403480 | 0.810015 | 1.422245e-50 | -8.615850e-47 |
| Msa0327990 | Msa0403480 | 0.832528 | 8.980905e-56 | -8.615850e-47 |
| Msa0337710 | Msa0403480 | -0.827756 | 1.312036e-54 | -8.615850e-47 |
| Msa0343500 | Msa0403480 | -0.837227 | 5.887986e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0403480 | MtrunA17_Chr4g0059081 | 98.737 | 475 | 6 | 0 | 1 | 475 | 1 | 475 | 0.0 | 964 |
| Msa0403480 | MtrunA17_Chr8g0339281 | 74.098 | 471 | 118 | 3 | 1 | 469 | 1 | 469 | 0.0 | 726 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0403480 | AT5G62790.1 | 82.390 | 477 | 81 | 2 | 1 | 475 | 2 | 477 | 0.0 | 789 |
| Msa0403480 | AT5G62790.2 | 78.715 | 498 | 82 | 3 | 1 | 475 | 1 | 497 | 0.0 | 778 |
Find 151 sgRNAs with CRISPR-Local
Find 361 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTACTCTTGATATCATATT+TGG | 0.060371 | 3_2:+33731277 | Msa0403480:three_prime_UTR |
| ATTGAAGCACATTACTTATT+TGG | 0.150895 | 3_2:+33729588 | Msa0403480:CDS |
| CAAGTCTTGTTACCTAGTTC+TGG | 0.168286 | 3_2:-33726683 | None:intergenic |
| AAGAAAGAACCTGGGAATTT+AGG | 0.189751 | 3_2:-33726438 | None:intergenic |
| TGTTTCCAGGATTAGCTATT+TGG | 0.208608 | 3_2:+33730799 | Msa0403480:intron |
| GGCAATTAGTGTCTCTTTAT+TGG | 0.216981 | 3_2:-33728446 | None:intergenic |
| TTCAATGGCCAAAGAAATTA+AGG | 0.227966 | 3_2:-33731056 | None:intergenic |
| ATAAGAACACTGCACTTTCT+TGG | 0.249835 | 3_2:+33726293 | Msa0403480:five_prime_UTR |
| AAAACATCCCAACTGGAGTA+TGG | 0.276203 | 3_2:+33729431 | Msa0403480:CDS |
| CCAACAATAGAGATGGGTTT+AGG | 0.286621 | 3_2:-33726713 | None:intergenic |
| TTACTCTTGATATCATATTT+GGG | 0.294756 | 3_2:+33731278 | Msa0403480:three_prime_UTR |
| TTCATCTGTTCTTGCACAAT+TGG | 0.303753 | 3_2:+33729782 | Msa0403480:CDS |
| TCATCTGTTCTTGCACAATT+GGG | 0.311960 | 3_2:+33729783 | Msa0403480:CDS |
| GAGCCTAGGCATAGGAGTTT+TGG | 0.326447 | 3_2:+33731237 | Msa0403480:three_prime_UTR |
| GCTTTGAAAAGAAAAGAAAA+TGG | 0.329522 | 3_2:+33726581 | Msa0403480:CDS |
| GCCTATGCTGCTGGCCGCGC+TGG | 0.330237 | 3_2:+33730095 | Msa0403480:CDS |
| ATCCACAATGGATGTGGTTT+CGG | 0.344540 | 3_2:-33726214 | None:intergenic |
| GCGACAACTCTAAACTTATC+TGG | 0.348351 | 3_2:-33726968 | None:intergenic |
| TCAATGACGCCTTGTTCTCC+TGG | 0.348897 | 3_2:-33727418 | None:intergenic |
| ATCACTGATTTAAGAAGAAT+TGG | 0.353707 | 3_2:+33730982 | Msa0403480:three_prime_UTR |
| AAGTCTTGTTACCTAGTTCT+GGG | 0.362313 | 3_2:-33726682 | None:intergenic |
| CAACAATAGAGATGGGTTTA+GGG | 0.365991 | 3_2:-33726712 | None:intergenic |
| AACCACATCCATTGTGGATT+CGG | 0.367464 | 3_2:+33726218 | Msa0403480:five_prime_UTR |
| GATGTGGTGGTGACAGAAAA+TGG | 0.372835 | 3_2:-33726263 | None:intergenic |
| AGGATTGGCAAACGCATATC+AGG | 0.374634 | 3_2:-33729810 | None:intergenic |
| ATCTCTATTGTTGGATGCAC+TGG | 0.375194 | 3_2:+33726722 | Msa0403480:CDS |
| TGAAAGAGAGGTGAGGGAAA+TGG | 0.396441 | 3_2:-33726128 | None:intergenic |
| TTCTTCGCTTCAGTGTATCC+AGG | 0.416692 | 3_2:+33729016 | Msa0403480:intron |
| GTTGGATGCACTGGTTCAAT+TGG | 0.420513 | 3_2:+33726731 | Msa0403480:CDS |
| GCAAACTAGCAGCATATTCT+CGG | 0.421203 | 3_2:-33730919 | None:intergenic |
| ACATCTTTCAGTTTCTCAAC+AGG | 0.421238 | 3_2:-33729390 | None:intergenic |
| CAGGCCATGATAATGTATAA+AGG | 0.421244 | 3_2:-33729830 | None:intergenic |
| GATGGATACTTAATGTTGTC+AGG | 0.430692 | 3_2:-33730062 | None:intergenic |
| TGTTCTCCTGGGATGATCTC+CGG | 0.435732 | 3_2:-33727406 | None:intergenic |
| CAATCCTTTATACATTATCA+TGG | 0.441678 | 3_2:+33729826 | Msa0403480:CDS |
| TCCAGCGCGGCCAGCAGCAT+AGG | 0.445154 | 3_2:-33730096 | None:intergenic |
| GTGACAACAGTGACTGCATC+CGG | 0.450389 | 3_2:-33727539 | None:intergenic |
| GATCAGTCTCATGCTAGAAC+AGG | 0.456977 | 3_2:-33730962 | None:intergenic |
| CGCGCTGGAGGAACCATGAC+AGG | 0.460029 | 3_2:+33730110 | Msa0403480:CDS |
| CAAATATGATATCAAGAGTA+AGG | 0.460491 | 3_2:-33731276 | None:intergenic |
| CAGAACTAGGTAACAAGACT+TGG | 0.462516 | 3_2:+33726684 | Msa0403480:CDS |
| ACAGTTGCGGCCATAGAAGC+TGG | 0.466883 | 3_2:+33728406 | Msa0403480:CDS |
| ATTGCTCGTCCTGGCCATGC+TGG | 0.468681 | 3_2:-33726659 | None:intergenic |
| CATTGTATACAATTGTTCAA+TGG | 0.468951 | 3_2:-33731071 | None:intergenic |
| TATGCTGCTGGCCGCGCTGG+AGG | 0.470238 | 3_2:+33730098 | Msa0403480:CDS |
| CACTAGCAGCTGGTAGGAAT+CGG | 0.471313 | 3_2:-33731020 | None:intergenic |
| ATGCATTAAAACATCCCAAC+TGG | 0.473839 | 3_2:+33729424 | Msa0403480:CDS |
| AGAGTTGTCGCACTTGCAGC+TGG | 0.474198 | 3_2:+33726980 | Msa0403480:CDS |
| AAACATCCCAACTGGAGTAT+GGG | 0.476050 | 3_2:+33729432 | Msa0403480:CDS |
| TGGTTTCGGACAGCATCGAC+AGG | 0.477698 | 3_2:-33726200 | None:intergenic |
| CCTAAACCCATCTCTATTGT+TGG | 0.480547 | 3_2:+33726713 | Msa0403480:CDS |
| CATGATAATGTATAAAGGAT+TGG | 0.483281 | 3_2:-33729825 | None:intergenic |
| ATGAATCTTGCCTATGCTGC+TGG | 0.484349 | 3_2:+33730086 | Msa0403480:CDS |
| TCTCCAGCTGAACTTAAGTC+CGG | 0.486037 | 3_2:+33726378 | Msa0403480:CDS |
| AGTAAGGCCTTGAGCATCAA+TGG | 0.486502 | 3_2:-33731260 | None:intergenic |
| GCTTCTATGGCCGCAACTGT+TGG | 0.486636 | 3_2:-33728403 | None:intergenic |
| TTCTCAGGTTGCACGTCACC+CGG | 0.488858 | 3_2:+33727520 | Msa0403480:intron |
| CATCTGTTCTTGCACAATTG+GGG | 0.489816 | 3_2:+33729784 | Msa0403480:CDS |
| AGCAGCATAGGCAAGATTCA+TGG | 0.491274 | 3_2:-33730084 | None:intergenic |
| AGCTGGAAAAGACATAGCTT+TGG | 0.491660 | 3_2:+33728423 | Msa0403480:CDS |
| CGAGTCATTCTAACTGCATC+CGG | 0.492265 | 3_2:+33729062 | Msa0403480:CDS |
| GAGGTGAGGGAAATGGAAAG+TGG | 0.493354 | 3_2:-33726121 | None:intergenic |
| AATTATTCACTATGACTTGT+GGG | 0.496488 | 3_2:+33730895 | Msa0403480:CDS |
| TTTGTATATTTGTGAAAGAG+AGG | 0.498634 | 3_2:-33726140 | None:intergenic |
| GGACCACCACCAGCATGGCC+AGG | 0.499057 | 3_2:+33726650 | Msa0403480:CDS |
| CGGGCAAGAGGAAGGACAAA+AGG | 0.499562 | 3_2:-33728475 | None:intergenic |
| CGTCCTGGCCATGCTGGTGG+TGG | 0.499985 | 3_2:-33726653 | None:intergenic |
| TCTTCGCTTCAGTGTATCCA+GGG | 0.503635 | 3_2:+33729017 | Msa0403480:intron |
| TGTTCAGTGCAGTCAACATC+AGG | 0.504129 | 3_2:+33726629 | Msa0403480:CDS |
| AGGAAGGACAAAAGGACCTC+CGG | 0.506111 | 3_2:-33728467 | None:intergenic |
| TCAGAACAATAGACTCTGTC+AGG | 0.507170 | 3_2:-33729849 | None:intergenic |
| AATAAAGAGACACTAATTGC+CGG | 0.508829 | 3_2:+33728448 | Msa0403480:CDS |
| TACATACCTAAAAGCACCTC+CGG | 0.511346 | 3_2:-33729081 | None:intergenic |
| AAACCGGACTTAAGTTCAGC+TGG | 0.512666 | 3_2:-33726381 | None:intergenic |
| CGCTGCACTCCTAAATTCCC+AGG | 0.512687 | 3_2:+33726429 | Msa0403480:CDS |
| AGTAGGCTGTGCAGGACTAA+AGG | 0.515160 | 3_2:+33727568 | Msa0403480:CDS |
| TATGCCTAGGCTCATATTGT+CGG | 0.516638 | 3_2:-33731227 | None:intergenic |
| TTAAGAAGAATTGGTGGTTG+TGG | 0.517158 | 3_2:+33730991 | Msa0403480:three_prime_UTR |
| AGTTCTGGGATTGCTCGTCC+TGG | 0.518603 | 3_2:-33726668 | None:intergenic |
| ACTGATTTAAGAAGAATTGG+TGG | 0.519427 | 3_2:+33730985 | Msa0403480:three_prime_UTR |
| AAATTATTCACTATGACTTG+TGG | 0.522725 | 3_2:+33730894 | Msa0403480:CDS |
| CATTACTCTTCTGATAGATC+AGG | 0.523314 | 3_2:+33727009 | Msa0403480:CDS |
| TTTCTAACAGCAACAAGTTG+TGG | 0.525340 | 3_2:-33727331 | None:intergenic |
| AGCCGAATCCACAATGGATG+TGG | 0.526808 | 3_2:-33726220 | None:intergenic |
| ATTGAATGTATGATTGATTG+TGG | 0.526824 | 3_2:-33729645 | None:intergenic |
| TACTCTTGATATCATATTTG+GGG | 0.527013 | 3_2:+33731279 | Msa0403480:three_prime_UTR |
| AGTGCAGCGGTTAGACTTGA+GGG | 0.531828 | 3_2:-33726415 | None:intergenic |
| ACGGGAATAGTAGGCTGTGC+AGG | 0.536835 | 3_2:+33727560 | Msa0403480:CDS |
| GAGTGCAGCGGTTAGACTTG+AGG | 0.537742 | 3_2:-33726416 | None:intergenic |
| ACATTCAATGATTGAAACAC+AGG | 0.537807 | 3_2:+33729659 | Msa0403480:CDS |
| ACTGTTGTCACGGGAATAGT+AGG | 0.538998 | 3_2:+33727551 | Msa0403480:CDS |
| CTGTTCTTGCACAATTGGGG+TGG | 0.541920 | 3_2:+33729787 | Msa0403480:CDS |
| AGGTGAGGGAAATGGAAAGT+GGG | 0.545272 | 3_2:-33726120 | None:intergenic |
| CAATGACGCCTTGTTCTCCT+GGG | 0.548322 | 3_2:-33727417 | None:intergenic |
| GTGCACCCTCTGTTAACCCC+TGG | 0.548422 | 3_2:-33729034 | None:intergenic |
| GGACGAGCAATCCCAGAACT+AGG | 0.548767 | 3_2:+33726671 | Msa0403480:CDS |
| CACTGGTTCAATTGGAACTC+AGG | 0.550266 | 3_2:+33726739 | Msa0403480:CDS |
| TATAGAAATAAATTAGAATG+AGG | 0.551961 | 3_2:-33726094 | None:intergenic |
| GATGCAGTCACTGTTGTCAC+GGG | 0.557100 | 3_2:+33727542 | Msa0403480:CDS |
| GCTCGTCCTGGCCATGCTGG+TGG | 0.558823 | 3_2:-33726656 | None:intergenic |
| CAAACTAGCAGCATATTCTC+GGG | 0.558988 | 3_2:-33730918 | None:intergenic |
| AGTGCATCCAACAATAGAGA+TGG | 0.563875 | 3_2:-33726720 | None:intergenic |
| CATAGTGAATAATTTCCTCA+AGG | 0.564756 | 3_2:-33730886 | None:intergenic |
| TTAACCGACAATATGAGCCT+AGG | 0.567556 | 3_2:+33731223 | Msa0403480:three_prime_UTR |
| AACATCCCAACTGGAGTATG+GGG | 0.571896 | 3_2:+33729433 | Msa0403480:CDS |
| AAAATGCTAACACTAGCAGC+TGG | 0.572425 | 3_2:-33731030 | None:intergenic |
| TATGCTTTCGGGCAAGAGGA+AGG | 0.576821 | 3_2:-33728483 | None:intergenic |
| GCAGAATGTTCGGAATCAGC+AGG | 0.577993 | 3_2:-33728520 | None:intergenic |
| CTATAAGATCAATAAAATTG+TGG | 0.582103 | 3_2:-33731161 | None:intergenic |
| GGATGCAGTCACTGTTGTCA+CGG | 0.582145 | 3_2:+33727541 | Msa0403480:CDS |
| GAGATCATCCCAGGAGAACA+AGG | 0.585659 | 3_2:+33727409 | Msa0403480:CDS |
| TGGCCAAAACTCCTATGCCT+AGG | 0.585868 | 3_2:-33731240 | None:intergenic |
| TGCACTAAGAACACCTGTCA+TGG | 0.586245 | 3_2:-33730123 | None:intergenic |
| TATTTGTGAAAGAGAGGTGA+GGG | 0.586401 | 3_2:-33726134 | None:intergenic |
| ATGTGGTGGTGACAGAAAAT+GGG | 0.587730 | 3_2:-33726262 | None:intergenic |
| TCTATTGTTCTGAAGTCACT+TGG | 0.588552 | 3_2:+33729859 | Msa0403480:CDS |
| GACAATATGAGCCTAGGCAT+AGG | 0.590496 | 3_2:+33731229 | Msa0403480:three_prime_UTR |
| ATAGTGAATAATTTCCTCAA+GGG | 0.592245 | 3_2:-33730885 | None:intergenic |
| GTTGACCTCACCTTCCCTTG+AGG | 0.594034 | 3_2:+33730871 | Msa0403480:CDS |
| ACGTTATGCTTTCGGGCAAG+AGG | 0.594225 | 3_2:-33728487 | None:intergenic |
| GTCCGAAACCACATCCATTG+TGG | 0.597252 | 3_2:+33726212 | Msa0403480:five_prime_UTR |
| GTGCATCCAACAATAGAGAT+GGG | 0.604941 | 3_2:-33726719 | None:intergenic |
| TACAACATCAGCCTTTGTGA+TGG | 0.608370 | 3_2:+33726341 | Msa0403480:exon |
| CTAGGTAACAAGACTTGGGA+AGG | 0.608965 | 3_2:+33726689 | Msa0403480:CDS |
| TGACAACAGTGACTGCATCC+GGG | 0.616685 | 3_2:-33727538 | None:intergenic |
| TGAATAATTTCCTCAAGGGA+AGG | 0.623968 | 3_2:-33730881 | None:intergenic |
| CTTCGCTTCAGTGTATCCAG+GGG | 0.627252 | 3_2:+33729018 | Msa0403480:intron |
| AATTTCCTCAAGGGAAGGTG+AGG | 0.628083 | 3_2:-33730876 | None:intergenic |
| GCATAGGCAAGATTCATGGA+TGG | 0.630920 | 3_2:-33730080 | None:intergenic |
| GGTTAACAGAGGGTGCACTT+AGG | 0.633566 | 3_2:+33729039 | Msa0403480:CDS |
| AGAACTAGGTAACAAGACTT+GGG | 0.640590 | 3_2:+33726685 | Msa0403480:CDS |
| TGTATCCAGGGGTTAACAGA+GGG | 0.641373 | 3_2:+33729029 | Msa0403480:CDS |
| TGCTAACACTAGCAGCTGGT+AGG | 0.641736 | 3_2:-33731026 | None:intergenic |
| TGTTCTTATGTAACAAGATG+TGG | 0.643340 | 3_2:-33726279 | None:intergenic |
| CTGGGAATTTAGGAGTGCAG+CGG | 0.643916 | 3_2:-33726428 | None:intergenic |
| CATCAGGACCACCACCAGCA+TGG | 0.651055 | 3_2:+33726645 | Msa0403480:CDS |
| TATTGTAGCCGAATCCACAA+TGG | 0.662851 | 3_2:-33726226 | None:intergenic |
| ATATTTGTGAAAGAGAGGTG+AGG | 0.666003 | 3_2:-33726135 | None:intergenic |
| GGTTTCGGACAGCATCGACA+GGG | 0.671419 | 3_2:-33726199 | None:intergenic |
| GTGCAGCGGTTAGACTTGAG+GGG | 0.671763 | 3_2:-33726414 | None:intergenic |
| GTCATTCTAACTGCATCCGG+AGG | 0.671792 | 3_2:+33729065 | Msa0403480:CDS |
| CAAATTGAGAGCCATCACAA+AGG | 0.673604 | 3_2:-33726352 | None:intergenic |
| AGGAGAACAAGGCGTCATTG+AGG | 0.674394 | 3_2:+33727420 | Msa0403480:CDS |
| TGCAGCGGTTAGACTTGAGG+GGG | 0.676580 | 3_2:-33726413 | None:intergenic |
| CAATTGTATACAATGTAGCA+TGG | 0.683310 | 3_2:+33731079 | Msa0403480:three_prime_UTR |
| AAGAATTGGTGGTTGTGGCG+TGG | 0.685663 | 3_2:+33730996 | Msa0403480:three_prime_UTR |
| GTGTATCCAGGGGTTAACAG+AGG | 0.688037 | 3_2:+33729028 | Msa0403480:intron |
| CTGTCATGGTTCCTCCAGCG+CGG | 0.688289 | 3_2:-33730109 | None:intergenic |
| TCTTATGTAACAAGATGTGG+TGG | 0.712666 | 3_2:-33726276 | None:intergenic |
| AAAGAGACACTAATTGCCGG+AGG | 0.715097 | 3_2:+33728451 | Msa0403480:CDS |
| TACTTGCAAAGATCAAGACG+AGG | 0.743866 | 3_2:-33729882 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAAAAACATCA+TGG | - | chr3_2:33726483-33726502 | None:intergenic | 10.0% |
| !! | TTAAATTAAAAAGCAATAAA+AGG | - | chr3_2:33728820-33728839 | None:intergenic | 10.0% |
| !! | TGATAGTTAAAATAATAAAA+AGG | + | chr3_2:33730455-33730474 | Msa0403480:intron | 10.0% |
| !! | GTTATATATATATATATATG+AGG | - | chr3_2:33730497-33730516 | None:intergenic | 10.0% |
| !!! | TTCATAATCATTTGATTTTT+AGG | + | chr3_2:33726551-33726570 | Msa0403480:intron | 15.0% |
| !!! | TTTGAAGTTAATTAATTGTA+TGG | + | chr3_2:33727206-33727225 | Msa0403480:intron | 15.0% |
| !! | TTAATTAATTGTATGGTTTA+AGG | + | chr3_2:33727213-33727232 | Msa0403480:intron | 15.0% |
| !! | TACTAATATATTGCTTATAA+TGG | + | chr3_2:33728002-33728021 | Msa0403480:intron | 15.0% |
| !! | TTTAATAAAAAAGATATCAG+AGG | - | chr3_2:33728948-33728967 | None:intergenic | 15.0% |
| !! | ATTTAATGATTATCAAAAGA+CGG | - | chr3_2:33729715-33729734 | None:intergenic | 15.0% |
| !!! | TTAATTATTTTTTCCTTTCT+AGG | + | chr3_2:33729758-33729777 | Msa0403480:intron | 15.0% |
| !! | GTTAAAATAATAAAAAGGAT+TGG | + | chr3_2:33730460-33730479 | Msa0403480:intron | 15.0% |
| !!! | ATAATCATTTGATTTTTAGG+TGG | + | chr3_2:33726554-33726573 | Msa0403480:intron | 20.0% |
| !!! | TTTTTTTGTGGTAATTGAAT+AGG | + | chr3_2:33726824-33726843 | Msa0403480:intron | 20.0% |
| !! | CAATTCAAAATTTGATTACA+TGG | - | chr3_2:33727052-33727071 | None:intergenic | 20.0% |
| !!! | GTTTTGTTTTTTATTTGACT+CGG | - | chr3_2:33727812-33727831 | None:intergenic | 20.0% |
| !! | TTATTACATGTAAAATTGCA+AGG | + | chr3_2:33727884-33727903 | Msa0403480:intron | 20.0% |
| !!! | ACCAGTCTTATTTTTATATT+AGG | + | chr3_2:33727914-33727933 | Msa0403480:intron | 20.0% |
| !!! | CCAGTCTTATTTTTATATTA+GGG | + | chr3_2:33727915-33727934 | Msa0403480:intron | 20.0% |
| !! | TGTGGCAAAAAAATATTTAA+CGG | + | chr3_2:33728699-33728718 | Msa0403480:intron | 20.0% |
| !! | ATATGTGAAATATATGAGTT+CGG | - | chr3_2:33728915-33728934 | None:intergenic | 20.0% |
| !! | ATATTTCACATATTATACTC+TGG | + | chr3_2:33728922-33728941 | Msa0403480:intron | 20.0% |
| !! | TTCTATTAATAAATGAAGCA+GGG | - | chr3_2:33728990-33729009 | None:intergenic | 20.0% |
| !! | TTTCTATTAATAAATGAAGC+AGG | - | chr3_2:33728991-33729010 | None:intergenic | 20.0% |
| !!! | TTATCTTTTCTGAAATGAAA+AGG | + | chr3_2:33729173-33729192 | Msa0403480:intron | 20.0% |
| !! | AACAAATTTACTATATACTC+GGG | - | chr3_2:33729541-33729560 | None:intergenic | 20.0% |
| !! | GAACAAATTTACTATATACT+CGG | - | chr3_2:33729542-33729561 | None:intergenic | 20.0% |
| !! | TTAAAAACTTTGTATTTGCA+TGG | - | chr3_2:33730338-33730357 | None:intergenic | 20.0% |
| !!! | TATTTTAACTATCAGTATGA+AGG | - | chr3_2:33730449-33730468 | None:intergenic | 20.0% |
| !!! | TAATAAAAAGGATTGGTTAT+TGG | + | chr3_2:33730467-33730486 | Msa0403480:intron | 20.0% |
| !!! | ATATTTATTAGCATTTGTTG+TGG | + | chr3_2:33730541-33730560 | Msa0403480:intron | 20.0% |
| !! | TGGTAAAAATCAAAGTAATA+TGG | - | chr3_2:33730589-33730608 | None:intergenic | 20.0% |
| !! | TCATTAAATCCACATTTAAT+TGG | + | chr3_2:33730767-33730786 | Msa0403480:intron | 20.0% |
| !!! | ATTTTTCTCCTTAATTTCTT+TGG | + | chr3_2:33731048-33731067 | Msa0403480:three_prime_UTR | 20.0% |
| !!! | TTTTTATCTTTCAAAATCTG+GGG | - | chr3_2:33731111-33731130 | None:intergenic | 20.0% |
| !!! | CTTTTTATCTTTCAAAATCT+GGG | - | chr3_2:33731112-33731131 | None:intergenic | 20.0% |
| !!! | CAGATTTTGAAAGATAAAAA+GGG | + | chr3_2:33731111-33731130 | Msa0403480:three_prime_UTR | 20.0% |
| !!! | GATAAAAAGGGTTTTATTAA+TGG | + | chr3_2:33731123-33731142 | Msa0403480:three_prime_UTR | 20.0% |
| !! | CTATAAGATCAATAAAATTG+TGG | - | chr3_2:33731164-33731183 | None:intergenic | 20.0% |
| !! | TTACTCTTGATATCATATTT+GGG | + | chr3_2:33731278-33731297 | Msa0403480:three_prime_UTR | 20.0% |
| ! | TTTGTATATTTGTGAAAGAG+AGG | - | chr3_2:33726143-33726162 | None:intergenic | 25.0% |
| ! | AAAAACATCATGGTACATAA+TGG | - | chr3_2:33726473-33726492 | None:intergenic | 25.0% |
| !!! | GCTTTGAAAAGAAAAGAAAA+TGG | + | chr3_2:33726581-33726600 | Msa0403480:CDS | 25.0% |
| !!! | GGATTTGTGTTTTTTTTTTG+TGG | + | chr3_2:33726812-33726831 | Msa0403480:intron | 25.0% |
| !!! | AGTTTTAAGAAAACAGAAAC+TGG | - | chr3_2:33727094-33727113 | None:intergenic | 25.0% |
| !! | GTTTCTGTTTTCTTAAAACT+CGG | + | chr3_2:33727094-33727113 | Msa0403480:intron | 25.0% |
| !! | TTTCTGTTTTCTTAAAACTC+GGG | + | chr3_2:33727095-33727114 | Msa0403480:intron | 25.0% |
| ! | TAGCTTATGAAAAACGATAT+TGG | - | chr3_2:33727489-33727508 | None:intergenic | 25.0% |
| ! | CCCTAATATAAAAATAAGAC+TGG | - | chr3_2:33727918-33727937 | None:intergenic | 25.0% |
| ! | ATTCTTTACTTCACAATTTG+TGG | - | chr3_2:33727967-33727986 | None:intergenic | 25.0% |
| ! | ACATTGAAGGACTAATTTAA+CGG | + | chr3_2:33728150-33728169 | Msa0403480:intron | 25.0% |
| ! | TTGGCTAATAAAAAAATGAG+AGG | - | chr3_2:33728387-33728406 | None:intergenic | 25.0% |
| !!! | TATTTTTACGTTATGCTTTC+GGG | - | chr3_2:33728497-33728516 | None:intergenic | 25.0% |
| !!! | GTATTTTTACGTTATGCTTT+CGG | - | chr3_2:33728498-33728517 | None:intergenic | 25.0% |
| ! | TGTGGCAAAAAAATATCTAA+CGG | - | chr3_2:33728851-33728870 | None:intergenic | 25.0% |
| ! | TATGTGAAATATATGAGTTC+GGG | - | chr3_2:33728914-33728933 | None:intergenic | 25.0% |
| ! | TCTATTAATAAATGAAGCAG+GGG | - | chr3_2:33728989-33729008 | None:intergenic | 25.0% |
| ! | TCCATCATGATATGAAAAAT+TGG | - | chr3_2:33729260-33729279 | None:intergenic | 25.0% |
| ! | TCTACAACAAAACTAAGAAA+GGG | - | chr3_2:33729313-33729332 | None:intergenic | 25.0% |
| !!! | ATTTGTTCTACTTATTTTGC+AGG | + | chr3_2:33729554-33729573 | Msa0403480:intron | 25.0% |
| !!! | TTTGTTCTACTTATTTTGCA+GGG | + | chr3_2:33729555-33729574 | Msa0403480:intron | 25.0% |
| ! | ATTGAAGCACATTACTTATT+TGG | + | chr3_2:33729588-33729607 | Msa0403480:CDS | 25.0% |
| ! | ATTGAATGTATGATTGATTG+TGG | - | chr3_2:33729648-33729667 | None:intergenic | 25.0% |
| !! | CATGATAATGTATAAAGGAT+TGG | - | chr3_2:33729828-33729847 | None:intergenic | 25.0% |
| ! | CAATCCTTTATACATTATCA+TGG | + | chr3_2:33729826-33729845 | Msa0403480:CDS | 25.0% |
| !! | ATTTTCTTCAGTATGAACTA+TGG | - | chr3_2:33729934-33729953 | None:intergenic | 25.0% |
| ! | AATATTCAGCACAATTCTTA+GGG | - | chr3_2:33730231-33730250 | None:intergenic | 25.0% |
| !!! | GGAAGTAAAACTTATTTTGA+AGG | - | chr3_2:33730288-33730307 | None:intergenic | 25.0% |
| ! | GCAAAATAACCAATTAAATG+TGG | - | chr3_2:33730779-33730798 | None:intergenic | 25.0% |
| !! | TAGCTATTTGGATATTTTCA+AGG | + | chr3_2:33730811-33730830 | Msa0403480:CDS | 25.0% |
| ! | ATAGTGAATAATTTCCTCAA+GGG | - | chr3_2:33730888-33730907 | None:intergenic | 25.0% |
| ! | AAATTATTCACTATGACTTG+TGG | + | chr3_2:33730894-33730913 | Msa0403480:CDS | 25.0% |
| !! | AATTATTCACTATGACTTGT+GGG | + | chr3_2:33730895-33730914 | Msa0403480:CDS | 25.0% |
| !!! | ATCACTGATTTAAGAAGAAT+TGG | + | chr3_2:33730982-33731001 | Msa0403480:three_prime_UTR | 25.0% |
| ! | CATTGTATACAATTGTTCAA+TGG | - | chr3_2:33731074-33731093 | None:intergenic | 25.0% |
| !! | CCTTTTTATCTTTCAAAATC+TGG | - | chr3_2:33731113-33731132 | None:intergenic | 25.0% |
| !!! | CCAGATTTTGAAAGATAAAA+AGG | + | chr3_2:33731110-33731129 | Msa0403480:three_prime_UTR | 25.0% |
| ! | CAAATATGATATCAAGAGTA+AGG | - | chr3_2:33731279-33731298 | None:intergenic | 25.0% |
| ! | CTTACTCTTGATATCATATT+TGG | + | chr3_2:33731277-33731296 | Msa0403480:three_prime_UTR | 25.0% |
| ! | TACTCTTGATATCATATTTG+GGG | + | chr3_2:33731279-33731298 | Msa0403480:three_prime_UTR | 25.0% |
| TGTTCTTATGTAACAAGATG+TGG | - | chr3_2:33726282-33726301 | None:intergenic | 30.0% | |
| !! | CACAAATCCATTTTAAAGAG+AGG | - | chr3_2:33726801-33726820 | None:intergenic | 30.0% |
| TAAGAAAACAGAAACTGGAA+GGG | - | chr3_2:33727089-33727108 | None:intergenic | 30.0% | |
| TTAAGAAAACAGAAACTGGA+AGG | - | chr3_2:33727090-33727109 | None:intergenic | 30.0% | |
| !! | TCATTCTAAAGCATTTAGGA+TGG | + | chr3_2:33727119-33727138 | Msa0403480:intron | 30.0% |
| !! | CATTCTAAAGCATTTAGGAT+GGG | + | chr3_2:33727120-33727139 | Msa0403480:intron | 30.0% |
| TTTCTGTACAAGAAACTTCA+AGG | - | chr3_2:33727161-33727180 | None:intergenic | 30.0% | |
| TTTGAATATACTACCAACTG+TGG | + | chr3_2:33727256-33727275 | Msa0403480:intron | 30.0% | |
| TTGAATATACTACCAACTGT+GGG | + | chr3_2:33727257-33727276 | Msa0403480:intron | 30.0% | |
| !!! | TTAATCTTTTTTCCCACAGT+TGG | - | chr3_2:33727272-33727291 | None:intergenic | 30.0% |
| GGGAAAAAAGATTAATCTCT+TGG | + | chr3_2:33727277-33727296 | Msa0403480:intron | 30.0% | |
| TCTTGGTATTTATGTTACAC+AGG | + | chr3_2:33727294-33727313 | Msa0403480:intron | 30.0% | |
| GAAAGATGTTGAACAAAAAC+CGG | + | chr3_2:33727387-33727406 | Msa0403480:CDS | 30.0% | |
| ACAAAAGAGAGTCGAAAAAA+GGG | - | chr3_2:33727605-33727624 | None:intergenic | 30.0% | |
| TACAAAAGAGAGTCGAAAAA+AGG | - | chr3_2:33727606-33727625 | None:intergenic | 30.0% | |
| AAACATCAATGATAACAACC+AGG | + | chr3_2:33727854-33727873 | Msa0403480:intron | 30.0% | |
| ACATGTAATAAGATAAGACC+TGG | - | chr3_2:33727875-33727894 | None:intergenic | 30.0% | |
| TGAACTTGGTCATTAAATGT+TGG | + | chr3_2:33728036-33728055 | Msa0403480:intron | 30.0% | |
| ! | AACCTTGAATGTGTCTTTTT+CGG | + | chr3_2:33728073-33728092 | Msa0403480:intron | 30.0% |
| TTCACACATTACAAACCTTT+GGG | + | chr3_2:33728105-33728124 | Msa0403480:intron | 30.0% | |
| ATCAGCAAAATAGACATTGA+AGG | + | chr3_2:33728137-33728156 | Msa0403480:intron | 30.0% | |
| TTAACGGCTAAATGAATGTT+TGG | + | chr3_2:33728166-33728185 | Msa0403480:intron | 30.0% | |
| TAACGGCTAAATGAATGTTT+GGG | + | chr3_2:33728167-33728186 | Msa0403480:intron | 30.0% | |
| ! | TTTTTATTAGCCAACAGTTG+CGG | + | chr3_2:33728393-33728412 | Msa0403480:intron | 30.0% |
| AATAAAGAGACACTAATTGC+CGG | + | chr3_2:33728448-33728467 | Msa0403480:CDS | 30.0% | |
| CTGAAAAATAGCAGAATGTT+CGG | - | chr3_2:33728533-33728552 | None:intergenic | 30.0% | |
| GTATGTAAAATAAACCTGAG+TGG | + | chr3_2:33729097-33729116 | Msa0403480:intron | 30.0% | |
| AAAAAGAAGCAACTGAACAT+GGG | - | chr3_2:33729140-33729159 | None:intergenic | 30.0% | |
| TAAAAAGAAGCAACTGAACA+TGG | - | chr3_2:33729141-33729160 | None:intergenic | 30.0% | |
| ! | TCAGTTGCTTCTTTTTATGT+TGG | + | chr3_2:33729144-33729163 | Msa0403480:intron | 30.0% |
| TGAAATGAAAAGGAACCAAA+AGG | + | chr3_2:33729183-33729202 | Msa0403480:intron | 30.0% | |
| GAAATGAAAAGGAACCAAAA+GGG | + | chr3_2:33729184-33729203 | Msa0403480:intron | 30.0% | |
| ! | GCCAATTTTTCATATCATGA+TGG | + | chr3_2:33729256-33729275 | Msa0403480:intron | 30.0% |
| AACTAAGAAAGGGAAATTCA+AGG | - | chr3_2:33729303-33729322 | None:intergenic | 30.0% | |
| GTCTACAACAAAACTAAGAA+AGG | - | chr3_2:33729314-33729333 | None:intergenic | 30.0% | |
| ACAGTCATGTAGATCATATA+GGG | - | chr3_2:33729336-33729355 | None:intergenic | 30.0% | |
| TACAGTCATGTAGATCATAT+AGG | - | chr3_2:33729337-33729356 | None:intergenic | 30.0% | |
| TGTTTCGCTTCATGATTAAT+AGG | + | chr3_2:33729361-33729380 | Msa0403480:intron | 30.0% | |
| GTTTCGCTTCATGATTAATA+GGG | + | chr3_2:33729362-33729381 | Msa0403480:intron | 30.0% | |
| ACATTCAATGATTGAAACAC+AGG | + | chr3_2:33729659-33729678 | Msa0403480:CDS | 30.0% | |
| AACTATGGAAACGAAATTAG+GGG | - | chr3_2:33729919-33729938 | None:intergenic | 30.0% | |
| GAACTATGGAAACGAAATTA+GGG | - | chr3_2:33729920-33729939 | None:intergenic | 30.0% | |
| TGAACTATGGAAACGAAATT+AGG | - | chr3_2:33729921-33729940 | None:intergenic | 30.0% | |
| GCATATTCACATTTCAAACA+TGG | - | chr3_2:33730015-33730034 | None:intergenic | 30.0% | |
| ! | TGTTTGAAATGTGAATATGC+AGG | + | chr3_2:33730015-33730034 | Msa0403480:intron | 30.0% |
| CAATATTCAGCACAATTCTT+AGG | - | chr3_2:33730232-33730251 | None:intergenic | 30.0% | |
| GGATAATTATCTTGAGGTTA+CGG | - | chr3_2:33730317-33730336 | None:intergenic | 30.0% | |
| TTGCATGGATAATTATCTTG+AGG | - | chr3_2:33730323-33730342 | None:intergenic | 30.0% | |
| ! | TGAAAATGAGTCGGTATTTT+GGG | - | chr3_2:33730363-33730382 | None:intergenic | 30.0% |
| AATATCCAAATAGCTAATCC+TGG | - | chr3_2:33730807-33730826 | None:intergenic | 30.0% | |
| !! | TTTGGATATTTTCAAGGTTG+TGG | + | chr3_2:33730817-33730836 | Msa0403480:CDS | 30.0% |
| CATAGTGAATAATTTCCTCA+AGG | - | chr3_2:33730889-33730908 | None:intergenic | 30.0% | |
| ! | ACTGATTTAAGAAGAATTGG+TGG | + | chr3_2:33730985-33731004 | Msa0403480:three_prime_UTR | 30.0% |
| TTCAATGGCCAAAGAAATTA+AGG | - | chr3_2:33731059-33731078 | None:intergenic | 30.0% | |
| CAATTGTATACAATGTAGCA+TGG | + | chr3_2:33731079-33731098 | Msa0403480:three_prime_UTR | 30.0% | |
| TATTTGTGAAAGAGAGGTGA+GGG | - | chr3_2:33726137-33726156 | None:intergenic | 35.0% | |
| ATATTTGTGAAAGAGAGGTG+AGG | - | chr3_2:33726138-33726157 | None:intergenic | 35.0% | |
| TCTTATGTAACAAGATGTGG+TGG | - | chr3_2:33726279-33726298 | None:intergenic | 35.0% | |
| ATAAGAACACTGCACTTTCT+TGG | + | chr3_2:33726293-33726312 | Msa0403480:five_prime_UTR | 35.0% | |
| AAGAAAGAACCTGGGAATTT+AGG | - | chr3_2:33726441-33726460 | None:intergenic | 35.0% | |
| !! | AAGTCTTGTTACCTAGTTCT+GGG | - | chr3_2:33726685-33726704 | None:intergenic | 35.0% |
| AGAACTAGGTAACAAGACTT+GGG | + | chr3_2:33726685-33726704 | Msa0403480:CDS | 35.0% | |
| ! | CAACAATAGAGATGGGTTTA+GGG | - | chr3_2:33726715-33726734 | None:intergenic | 35.0% |
| AATTGAATAGGTGACAGGAA+AGG | + | chr3_2:33726836-33726855 | Msa0403480:intron | 35.0% | |
| GACAGAAAATCAAACATTGC+AGG | - | chr3_2:33726878-33726897 | None:intergenic | 35.0% | |
| ! | ATGTATCATTTTCCCCTGTA+TGG | + | chr3_2:33726913-33726932 | Msa0403480:intron | 35.0% |
| AGTGTCTACAAAACCATACA+GGG | - | chr3_2:33726929-33726948 | None:intergenic | 35.0% | |
| TAGTGTCTACAAAACCATAC+AGG | - | chr3_2:33726930-33726949 | None:intergenic | 35.0% | |
| CATTACTCTTCTGATAGATC+AGG | + | chr3_2:33727009-33727028 | Msa0403480:CDS | 35.0% | |
| AAGAAAACAGAAACTGGAAG+GGG | - | chr3_2:33727088-33727107 | None:intergenic | 35.0% | |
| !! | GGGTTCATTCTAAAGCATTT+AGG | + | chr3_2:33727115-33727134 | Msa0403480:intron | 35.0% |
| TTTCTAACAGCAACAAGTTG+TGG | - | chr3_2:33727334-33727353 | None:intergenic | 35.0% | |
| GCTATTGTTTGTGTATTCTC+AGG | + | chr3_2:33727505-33727524 | Msa0403480:intron | 35.0% | |
| !! | TAGGGCATTGATAGTTTGAA+AGG | + | chr3_2:33727933-33727952 | Msa0403480:intron | 35.0% |
| TGACCAAGTTCATGCAATAT+GGG | - | chr3_2:33728028-33728047 | None:intergenic | 35.0% | |
| ATGACCAAGTTCATGCAATA+TGG | - | chr3_2:33728029-33728048 | None:intergenic | 35.0% | |
| AACCGAAAAAGACACATTCA+AGG | - | chr3_2:33728078-33728097 | None:intergenic | 35.0% | |
| GTTCACACATTACAAACCTT+TGG | + | chr3_2:33728104-33728123 | Msa0403480:intron | 35.0% | |
| AACGGCTAAATGAATGTTTG+GGG | + | chr3_2:33728168-33728187 | Msa0403480:intron | 35.0% | |
| CAGTCATAATAGTACACGAA+TGG | - | chr3_2:33728226-33728245 | None:intergenic | 35.0% | |
| GTGTACTATTATGACTGATG+TGG | + | chr3_2:33728229-33728248 | Msa0403480:intron | 35.0% | |
| ! | TATGTCTTTTCCAGCTTCTA+TGG | - | chr3_2:33728419-33728438 | None:intergenic | 35.0% |
| GGCAATTAGTGTCTCTTTAT+TGG | - | chr3_2:33728449-33728468 | None:intergenic | 35.0% | |
| !!! | CGAACATTCTGCTATTTTTC+AGG | + | chr3_2:33728531-33728550 | Msa0403480:CDS | 35.0% |
| GTAGTGAACTATAGATACTC+TGG | + | chr3_2:33728599-33728618 | Msa0403480:intron | 35.0% | |
| !! | GGCTTATATATTTCGAGTTC+AGG | + | chr3_2:33728620-33728639 | Msa0403480:intron | 35.0% |
| TAAATGGAGCTTAGCCTAAA+TGG | - | chr3_2:33728652-33728671 | None:intergenic | 35.0% | |
| AAGCTCCATTTACTCCATTT+AGG | + | chr3_2:33728660-33728679 | Msa0403480:intron | 35.0% | |
| AGCTCCATTTACTCCATTTA+GGG | + | chr3_2:33728661-33728680 | Msa0403480:intron | 35.0% | |
| CAAACCCTAAATGGAGTAAA+TGG | - | chr3_2:33728882-33728901 | None:intergenic | 35.0% | |
| ! | CATTTACTCCATTTAGGGTT+TGG | + | chr3_2:33728666-33728685 | Msa0403480:intron | 35.0% |
| GTTGTGATATGAGAGAAGAA+TGG | - | chr3_2:33728795-33728814 | None:intergenic | 35.0% | |
| ! | CATTTACTCCATTTAGGGTT+TGG | - | chr3_2:33728666-33728685 | None:intergenic | 35.0% |
| CAAACCCTAAATGGAGTAAA+TGG | + | chr3_2:33728882-33728901 | Msa0403480:intron | 35.0% | |
| TGCTCCATTTACTCCATTTA+GGG | - | chr3_2:33728889-33728908 | None:intergenic | 35.0% | |
| ATGCTCCATTTACTCCATTT+AGG | - | chr3_2:33728890-33728909 | None:intergenic | 35.0% | |
| GCTTCATGATTAATAGGGAT+TGG | + | chr3_2:33729367-33729386 | Msa0403480:intron | 35.0% | |
| ACATCTTTCAGTTTCTCAAC+AGG | - | chr3_2:33729393-33729412 | None:intergenic | 35.0% | |
| !!! | GTTGGGATGTTTTAATGCAT+CGG | - | chr3_2:33729424-33729443 | None:intergenic | 35.0% |
| ATGCATTAAAACATCCCAAC+TGG | + | chr3_2:33729424-33729443 | Msa0403480:CDS | 35.0% | |
| TATGGGGAAAAAGATAACTG+TGG | + | chr3_2:33729449-33729468 | Msa0403480:CDS | 35.0% | |
| !! | CTCTGCTACACTTTTTAACA+AGG | + | chr3_2:33729473-33729492 | Msa0403480:CDS | 35.0% |
| GACCTTATACTATGTTGTGT+TGG | + | chr3_2:33729686-33729705 | Msa0403480:intron | 35.0% | |
| AGCCAACACAACATAGTATA+AGG | - | chr3_2:33729691-33729710 | None:intergenic | 35.0% | |
| AGAACAGATGAATCCTAGAA+AGG | - | chr3_2:33729774-33729793 | None:intergenic | 35.0% | |
| TTCATCTGTTCTTGCACAAT+TGG | + | chr3_2:33729782-33729801 | Msa0403480:CDS | 35.0% | |
| TCATCTGTTCTTGCACAATT+GGG | + | chr3_2:33729783-33729802 | Msa0403480:CDS | 35.0% | |
| ! | CAGGCCATGATAATGTATAA+AGG | - | chr3_2:33729833-33729852 | None:intergenic | 35.0% |
| !! | TCTATTGTTCTGAAGTCACT+TGG | + | chr3_2:33729859-33729878 | Msa0403480:CDS | 35.0% |
| ACTATGGAAACGAAATTAGG+GGG | - | chr3_2:33729918-33729937 | None:intergenic | 35.0% | |
| GAAAATAGACAGATTCACCT+AGG | + | chr3_2:33729948-33729967 | Msa0403480:intron | 35.0% | |
| GATGGATACTTAATGTTGTC+AGG | - | chr3_2:33730065-33730084 | None:intergenic | 35.0% | |
| AATTATCTTGAGGTTACGGT+GGG | - | chr3_2:33730313-33730332 | None:intergenic | 35.0% | |
| TAATTATCTTGAGGTTACGG+TGG | - | chr3_2:33730314-33730333 | None:intergenic | 35.0% | |
| ! | CTGAAAATGAGTCGGTATTT+TGG | - | chr3_2:33730364-33730383 | None:intergenic | 35.0% |
| !!! | CAAAATACCGACTCATTTTC+AGG | + | chr3_2:33730362-33730381 | Msa0403480:intron | 35.0% |
| TCACAAACCTGAAAATGAGT+CGG | - | chr3_2:33730372-33730391 | None:intergenic | 35.0% | |
| CTTTGTGAAAGCAAGATTCT+GGG | - | chr3_2:33730416-33730435 | None:intergenic | 35.0% | |
| AACTTGCATCTGTATTCAGT+AGG | + | chr3_2:33730514-33730533 | Msa0403480:intron | 35.0% | |
| ACTTGCATCTGTATTCAGTA+GGG | + | chr3_2:33730515-33730534 | Msa0403480:intron | 35.0% | |
| GTCTTGAATCCTTAATTGTG+TGG | + | chr3_2:33730563-33730582 | Msa0403480:intron | 35.0% | |
| GTAATATGGCCACACAATTA+AGG | - | chr3_2:33730575-33730594 | None:intergenic | 35.0% | |
| ! | TGTAAAGAACTGAAAAGTGC+TGG | - | chr3_2:33730609-33730628 | None:intergenic | 35.0% |
| TGTCAATTTGAAAAAGGAGC+CGG | - | chr3_2:33730712-33730731 | None:intergenic | 35.0% | |
| ! | GAGCACTGTCAATTTGAAAA+AGG | - | chr3_2:33730718-33730737 | None:intergenic | 35.0% |
| !!! | TTGGTTATTTTGCTGTTTCC+AGG | + | chr3_2:33730786-33730805 | Msa0403480:intron | 35.0% |
| !! | TGTTTCCAGGATTAGCTATT+TGG | + | chr3_2:33730799-33730818 | Msa0403480:intron | 35.0% |
| TGAATAATTTCCTCAAGGGA+AGG | - | chr3_2:33730884-33730903 | None:intergenic | 35.0% | |
| ! | TTAAGAAGAATTGGTGGTTG+TGG | + | chr3_2:33730991-33731010 | Msa0403480:three_prime_UTR | 35.0% |
| ATCCACAATGGATGTGGTTT+CGG | - | chr3_2:33726217-33726236 | None:intergenic | 40.0% | |
| AACCACATCCATTGTGGATT+CGG | + | chr3_2:33726218-33726237 | Msa0403480:five_prime_UTR | 40.0% | |
| TATTGTAGCCGAATCCACAA+TGG | - | chr3_2:33726229-33726248 | None:intergenic | 40.0% | |
| ! | ATGTGGTGGTGACAGAAAAT+GGG | - | chr3_2:33726265-33726284 | None:intergenic | 40.0% |
| TACAACATCAGCCTTTGTGA+TGG | + | chr3_2:33726341-33726360 | Msa0403480:exon | 40.0% | |
| CAAATTGAGAGCCATCACAA+AGG | - | chr3_2:33726355-33726374 | None:intergenic | 40.0% | |
| CTGAAGAGAAGAAAGAACCT+GGG | - | chr3_2:33726449-33726468 | None:intergenic | 40.0% | |
| ACTGAAGAGAAGAAAGAACC+TGG | - | chr3_2:33726450-33726469 | None:intergenic | 40.0% | |
| !! | CAAGTCTTGTTACCTAGTTC+TGG | - | chr3_2:33726686-33726705 | None:intergenic | 40.0% |
| CAGAACTAGGTAACAAGACT+TGG | + | chr3_2:33726684-33726703 | Msa0403480:CDS | 40.0% | |
| ! | CCAACAATAGAGATGGGTTT+AGG | - | chr3_2:33726716-33726735 | None:intergenic | 40.0% |
| CCTAAACCCATCTCTATTGT+TGG | + | chr3_2:33726713-33726732 | Msa0403480:CDS | 40.0% | |
| GTGCATCCAACAATAGAGAT+GGG | - | chr3_2:33726722-33726741 | None:intergenic | 40.0% | |
| AGTGCATCCAACAATAGAGA+TGG | - | chr3_2:33726723-33726742 | None:intergenic | 40.0% | |
| ATCTCTATTGTTGGATGCAC+TGG | + | chr3_2:33726722-33726741 | Msa0403480:CDS | 40.0% | |
| ! | CTGCAGTCCTCTCTTTAAAA+TGG | + | chr3_2:33726791-33726810 | Msa0403480:intron | 40.0% |
| GTGGTAATTGAATAGGTGAC+AGG | + | chr3_2:33726831-33726850 | Msa0403480:intron | 40.0% | |
| GTGTCTACAAAACCATACAG+GGG | - | chr3_2:33726928-33726947 | None:intergenic | 40.0% | |
| GCGACAACTCTAAACTTATC+TGG | - | chr3_2:33726971-33726990 | None:intergenic | 40.0% | |
| GAGTCGAAAAAAGGGAAAAG+AGG | - | chr3_2:33727597-33727616 | None:intergenic | 40.0% | |
| GCTGATTGAATTAGTCCCAA+AGG | - | chr3_2:33728123-33728142 | None:intergenic | 40.0% | |
| GACTGATGTGGTATCTTTCA+AGG | + | chr3_2:33728241-33728260 | Msa0403480:intron | 40.0% | |
| AGCTGGAAAAGACATAGCTT+TGG | + | chr3_2:33728423-33728442 | Msa0403480:CDS | 40.0% | |
| AGTTCAGGTATGCTCCATTT+AGG | + | chr3_2:33728635-33728654 | Msa0403480:intron | 40.0% | |
| TCTTGCATCCAAACCCTAAA+TGG | - | chr3_2:33728873-33728892 | None:intergenic | 40.0% | |
| TCTTGCATCCAAACCCTAAA+TGG | + | chr3_2:33728873-33728892 | Msa0403480:intron | 40.0% | |
| !! | TACATACCTAAAAGCACCTC+CGG | - | chr3_2:33729084-33729103 | None:intergenic | 40.0% |
| AGGAACCAAAAGGGAATGTA+TGG | + | chr3_2:33729193-33729212 | Msa0403480:intron | 40.0% | |
| ! | CAAGGTTTTCCACGATCAAT+GGG | - | chr3_2:33729285-33729304 | None:intergenic | 40.0% |
| ! | TCAAGGTTTTCCACGATCAA+TGG | - | chr3_2:33729286-33729305 | None:intergenic | 40.0% |
| AAAACATCCCAACTGGAGTA+TGG | + | chr3_2:33729431-33729450 | Msa0403480:CDS | 40.0% | |
| AAACATCCCAACTGGAGTAT+GGG | + | chr3_2:33729432-33729451 | Msa0403480:CDS | 40.0% | |
| ! | TTTTTCCCCATACTCCAGTT+GGG | - | chr3_2:33729441-33729460 | None:intergenic | 40.0% |
| CATCTGTTCTTGCACAATTG+GGG | + | chr3_2:33729784-33729803 | Msa0403480:CDS | 40.0% | |
| TCAGAACAATAGACTCTGTC+AGG | - | chr3_2:33729852-33729871 | None:intergenic | 40.0% | |
| TACTTGCAAAGATCAAGACG+AGG | - | chr3_2:33729885-33729904 | None:intergenic | 40.0% | |
| CGTCTTGATCTTTGCAAGTA+CGG | + | chr3_2:33729885-33729904 | Msa0403480:intron | 40.0% | |
| ACTGCAAAAACTCTATGCCT+AGG | - | chr3_2:33729968-33729987 | None:intergenic | 40.0% | |
| GAAATGTGAATATGCAGGCT+TGG | + | chr3_2:33730020-33730039 | Msa0403480:intron | 40.0% | |
| ! | AAGATTCTGGGAGAGTCAAA+TGG | - | chr3_2:33730404-33730423 | None:intergenic | 40.0% |
| GCTTTGTGAAAGCAAGATTC+TGG | - | chr3_2:33730417-33730436 | None:intergenic | 40.0% | |
| ! | CCTAATGGTCATGTTTTGCT+TGG | - | chr3_2:33730645-33730664 | None:intergenic | 40.0% |
| CCAAGCAAAACATGACCATT+AGG | + | chr3_2:33730642-33730661 | Msa0403480:intron | 40.0% | |
| GAACATGACACAGTTCCTAA+TGG | - | chr3_2:33730660-33730679 | None:intergenic | 40.0% | |
| GTCAATTTGAAAAAGGAGCC+GGG | - | chr3_2:33730711-33730730 | None:intergenic | 40.0% | |
| ! | CTCCATGCTTCATAGGTTTT+AGG | + | chr3_2:33730735-33730754 | Msa0403480:intron | 40.0% |
| AGCCTAAAACCTATGAAGCA+TGG | - | chr3_2:33730740-33730759 | None:intergenic | 40.0% | |
| CAAACTAGCAGCATATTCTC+GGG | - | chr3_2:33730921-33730940 | None:intergenic | 40.0% | |
| GCAAACTAGCAGCATATTCT+CGG | - | chr3_2:33730922-33730941 | None:intergenic | 40.0% | |
| AAAATGCTAACACTAGCAGC+TGG | - | chr3_2:33731033-33731052 | None:intergenic | 40.0% | |
| TTAACCGACAATATGAGCCT+AGG | + | chr3_2:33731223-33731242 | Msa0403480:three_prime_UTR | 40.0% | |
| TATGCCTAGGCTCATATTGT+CGG | - | chr3_2:33731230-33731249 | None:intergenic | 40.0% | |
| AGGTGAGGGAAATGGAAAGT+GGG | - | chr3_2:33726123-33726142 | None:intergenic | 45.0% | |
| TGAAAGAGAGGTGAGGGAAA+TGG | - | chr3_2:33726131-33726150 | None:intergenic | 45.0% | |
| ! | GATGTGGTGGTGACAGAAAA+TGG | - | chr3_2:33726266-33726285 | None:intergenic | 45.0% |
| TCTCCAGCTGAACTTAAGTC+CGG | + | chr3_2:33726378-33726397 | Msa0403480:CDS | 45.0% | |
| AAACCGGACTTAAGTTCAGC+TGG | - | chr3_2:33726384-33726403 | None:intergenic | 45.0% | |
| TGTTCAGTGCAGTCAACATC+AGG | + | chr3_2:33726629-33726648 | Msa0403480:CDS | 45.0% | |
| CTAGGTAACAAGACTTGGGA+AGG | + | chr3_2:33726689-33726708 | Msa0403480:CDS | 45.0% | |
| !! | GTTGGATGCACTGGTTCAAT+TGG | + | chr3_2:33726731-33726750 | Msa0403480:CDS | 45.0% |
| !! | CACTGGTTCAATTGGAACTC+AGG | + | chr3_2:33726739-33726758 | Msa0403480:CDS | 45.0% |
| ACTGTTGTCACGGGAATAGT+AGG | + | chr3_2:33727551-33727570 | Msa0403480:CDS | 45.0% | |
| TGGCCCATATTGCATGAACT+TGG | + | chr3_2:33728022-33728041 | Msa0403480:intron | 45.0% | |
| AAAGAGACACTAATTGCCGG+AGG | + | chr3_2:33728451-33728470 | Msa0403480:CDS | 45.0% | |
| TTCTTCGCTTCAGTGTATCC+AGG | + | chr3_2:33729016-33729035 | Msa0403480:intron | 45.0% | |
| TCTTCGCTTCAGTGTATCCA+GGG | + | chr3_2:33729017-33729036 | Msa0403480:intron | 45.0% | |
| TGTATCCAGGGGTTAACAGA+GGG | + | chr3_2:33729029-33729048 | Msa0403480:CDS | 45.0% | |
| CGAGTCATTCTAACTGCATC+CGG | + | chr3_2:33729062-33729081 | Msa0403480:CDS | 45.0% | |
| AGCAACTGAACATGGGAAAC+AGG | - | chr3_2:33729133-33729152 | None:intergenic | 45.0% | |
| ! | GTGTGCCATACATTCCCTTT+TGG | - | chr3_2:33729201-33729220 | None:intergenic | 45.0% |
| TGATGGAAACCCATTGATCG+TGG | + | chr3_2:33729273-33729292 | Msa0403480:intron | 45.0% | |
| AACATCCCAACTGGAGTATG+GGG | + | chr3_2:33729433-33729452 | Msa0403480:CDS | 45.0% | |
| ! | CTTTTTCCCCATACTCCAGT+TGG | - | chr3_2:33729442-33729461 | None:intergenic | 45.0% |
| ! | AGGATTGGCAAACGCATATC+AGG | - | chr3_2:33729813-33729832 | None:intergenic | 45.0% |
| GCATAGGCAAGATTCATGGA+TGG | - | chr3_2:33730083-33730102 | None:intergenic | 45.0% | |
| AGCAGCATAGGCAAGATTCA+TGG | - | chr3_2:33730087-33730106 | None:intergenic | 45.0% | |
| ATGAATCTTGCCTATGCTGC+TGG | + | chr3_2:33730086-33730105 | Msa0403480:CDS | 45.0% | |
| TGCACTAAGAACACCTGTCA+TGG | - | chr3_2:33730126-33730145 | None:intergenic | 45.0% | |
| TGCATCTGTATTCAGTAGGG+TGG | + | chr3_2:33730518-33730537 | Msa0403480:intron | 45.0% | |
| AATTTCCTCAAGGGAAGGTG+AGG | - | chr3_2:33730879-33730898 | None:intergenic | 45.0% | |
| GATCAGTCTCATGCTAGAAC+AGG | - | chr3_2:33730965-33730984 | None:intergenic | 45.0% | |
| GACAATATGAGCCTAGGCAT+AGG | + | chr3_2:33731229-33731248 | Msa0403480:three_prime_UTR | 45.0% | |
| !! | GTTTTGGCCATTGATGCTCA+AGG | + | chr3_2:33731253-33731272 | Msa0403480:three_prime_UTR | 45.0% |
| AGTAAGGCCTTGAGCATCAA+TGG | - | chr3_2:33731263-33731282 | None:intergenic | 45.0% | |
| GAGGTGAGGGAAATGGAAAG+TGG | - | chr3_2:33726124-33726143 | None:intergenic | 50.0% | |
| GTCCGAAACCACATCCATTG+TGG | + | chr3_2:33726212-33726231 | Msa0403480:five_prime_UTR | 50.0% | |
| AGCCGAATCCACAATGGATG+TGG | - | chr3_2:33726223-33726242 | None:intergenic | 50.0% | |
| GAGGGGGTCAGTGAAAAAAC+CGG | - | chr3_2:33726400-33726419 | None:intergenic | 50.0% | |
| AGTGCAGCGGTTAGACTTGA+GGG | - | chr3_2:33726418-33726437 | None:intergenic | 50.0% | |
| ! | CTGGGAATTTAGGAGTGCAG+CGG | - | chr3_2:33726431-33726450 | None:intergenic | 50.0% |
| CAAAAACCGGAGATCATCCC+AGG | + | chr3_2:33727400-33727419 | Msa0403480:CDS | 50.0% | |
| TGTTCTCCTGGGATGATCTC+CGG | - | chr3_2:33727409-33727428 | None:intergenic | 50.0% | |
| GAGATCATCCCAGGAGAACA+AGG | + | chr3_2:33727409-33727428 | Msa0403480:CDS | 50.0% | |
| ! | CAATGACGCCTTGTTCTCCT+GGG | - | chr3_2:33727420-33727439 | None:intergenic | 50.0% |
| ! | TCAATGACGCCTTGTTCTCC+TGG | - | chr3_2:33727421-33727440 | None:intergenic | 50.0% |
| ! | AGGAGAACAAGGCGTCATTG+AGG | + | chr3_2:33727420-33727439 | Msa0403480:CDS | 50.0% |
| ! | AGAACAAGGCGTCATTGAGG+TGG | + | chr3_2:33727423-33727442 | Msa0403480:intron | 50.0% |
| GCGTCATTGAGGTGGACATT+TGG | + | chr3_2:33727431-33727450 | Msa0403480:intron | 50.0% | |
| TGACAACAGTGACTGCATCC+GGG | - | chr3_2:33727541-33727560 | None:intergenic | 50.0% | |
| GTGACAACAGTGACTGCATC+CGG | - | chr3_2:33727542-33727561 | None:intergenic | 50.0% | |
| GGATGCAGTCACTGTTGTCA+CGG | + | chr3_2:33727541-33727560 | Msa0403480:CDS | 50.0% | |
| GATGCAGTCACTGTTGTCAC+GGG | + | chr3_2:33727542-33727561 | Msa0403480:CDS | 50.0% | |
| AGTAGGCTGTGCAGGACTAA+AGG | + | chr3_2:33727568-33727587 | Msa0403480:CDS | 50.0% | |
| TGCGTGTAGATGCATGCACA+CGG | - | chr3_2:33727663-33727682 | None:intergenic | 50.0% | |
| AGGAAGGACAAAAGGACCTC+CGG | - | chr3_2:33728470-33728489 | None:intergenic | 50.0% | |
| TATGCTTTCGGGCAAGAGGA+AGG | - | chr3_2:33728486-33728505 | None:intergenic | 50.0% | |
| ACGTTATGCTTTCGGGCAAG+AGG | - | chr3_2:33728490-33728509 | None:intergenic | 50.0% | |
| GCAGAATGTTCGGAATCAGC+AGG | - | chr3_2:33728523-33728542 | None:intergenic | 50.0% | |
| GGGTTTGGATGCAAGACATG+TGG | + | chr3_2:33728681-33728700 | Msa0403480:intron | 50.0% | |
| GGGTTTGGATGCAAGACATG+TGG | - | chr3_2:33728681-33728700 | None:intergenic | 50.0% | |
| CTTCGCTTCAGTGTATCCAG+GGG | + | chr3_2:33729018-33729037 | Msa0403480:intron | 50.0% | |
| GTGTATCCAGGGGTTAACAG+AGG | + | chr3_2:33729028-33729047 | Msa0403480:intron | 50.0% | |
| ! | GGTTAACAGAGGGTGCACTT+AGG | + | chr3_2:33729039-33729058 | Msa0403480:CDS | 50.0% |
| GTCATTCTAACTGCATCCGG+AGG | + | chr3_2:33729065-33729084 | Msa0403480:CDS | 50.0% | |
| !! | CAGGAAAAGTGCTACCACTC+AGG | - | chr3_2:33729114-33729133 | None:intergenic | 50.0% |
| CTGTTCTTGCACAATTGGGG+TGG | + | chr3_2:33729787-33729806 | Msa0403480:CDS | 50.0% | |
| ATCTTGAGGTTACGGTGGGA+TGG | - | chr3_2:33730309-33730328 | None:intergenic | 50.0% | |
| GACAGTGCTCCATGCTTCAT+AGG | + | chr3_2:33730728-33730747 | Msa0403480:intron | 50.0% | |
| ! | AAGAATTGGTGGTTGTGGCG+TGG | + | chr3_2:33730996-33731015 | Msa0403480:three_prime_UTR | 50.0% |
| CACTAGCAGCTGGTAGGAAT+CGG | - | chr3_2:33731023-33731042 | None:intergenic | 50.0% | |
| TGCTAACACTAGCAGCTGGT+AGG | - | chr3_2:33731029-33731048 | None:intergenic | 50.0% | |
| ! | GAGCCTAGGCATAGGAGTTT+TGG | + | chr3_2:33731237-33731256 | Msa0403480:three_prime_UTR | 50.0% |
| TGGCCAAAACTCCTATGCCT+AGG | - | chr3_2:33731243-33731262 | None:intergenic | 50.0% | |
| !! | GGTTTCGGACAGCATCGACA+GGG | - | chr3_2:33726202-33726221 | None:intergenic | 55.0% |
| !! | TGGTTTCGGACAGCATCGAC+AGG | - | chr3_2:33726203-33726222 | None:intergenic | 55.0% |
| TGCAGCGGTTAGACTTGAGG+GGG | - | chr3_2:33726416-33726435 | None:intergenic | 55.0% | |
| GTGCAGCGGTTAGACTTGAG+GGG | - | chr3_2:33726417-33726436 | None:intergenic | 55.0% | |
| GAGTGCAGCGGTTAGACTTG+AGG | - | chr3_2:33726419-33726438 | None:intergenic | 55.0% | |
| CGCTGCACTCCTAAATTCCC+AGG | + | chr3_2:33726429-33726448 | Msa0403480:CDS | 55.0% | |
| !! | AGTTCTGGGATTGCTCGTCC+TGG | - | chr3_2:33726671-33726690 | None:intergenic | 55.0% |
| GGACGAGCAATCCCAGAACT+AGG | + | chr3_2:33726671-33726690 | Msa0403480:CDS | 55.0% | |
| AGAGTTGTCGCACTTGCAGC+TGG | + | chr3_2:33726980-33726999 | Msa0403480:CDS | 55.0% | |
| ! | TTCTCAGGTTGCACGTCACC+CGG | + | chr3_2:33727520-33727539 | Msa0403480:intron | 55.0% |
| ACGGGAATAGTAGGCTGTGC+AGG | + | chr3_2:33727560-33727579 | Msa0403480:CDS | 55.0% | |
| GCTTCTATGGCCGCAACTGT+TGG | - | chr3_2:33728406-33728425 | None:intergenic | 55.0% | |
| ACAGTTGCGGCCATAGAAGC+TGG | + | chr3_2:33728406-33728425 | Msa0403480:CDS | 55.0% | |
| CGGGCAAGAGGAAGGACAAA+AGG | - | chr3_2:33728478-33728497 | None:intergenic | 55.0% | |
| !!! | CTGCATCCGGAGGTGCTTTT+AGG | + | chr3_2:33729075-33729094 | Msa0403480:CDS | 55.0% |
| TGAAAAAGGAGCCGGGCACA+CGG | - | chr3_2:33730704-33730723 | None:intergenic | 55.0% | |
| GTTGACCTCACCTTCCCTTG+AGG | + | chr3_2:33730871-33730890 | Msa0403480:CDS | 55.0% | |
| CATCAGGACCACCACCAGCA+TGG | + | chr3_2:33726645-33726664 | Msa0403480:CDS | 60.0% | |
| ATTGCTCGTCCTGGCCATGC+TGG | - | chr3_2:33726662-33726681 | None:intergenic | 60.0% | |
| GTGCACCCTCTGTTAACCCC+TGG | - | chr3_2:33729037-33729056 | None:intergenic | 60.0% | |
| CTGTCATGGTTCCTCCAGCG+CGG | - | chr3_2:33730112-33730131 | None:intergenic | 60.0% | |
| TGACACATGTGCCGTGTGCC+CGG | + | chr3_2:33730690-33730709 | Msa0403480:intron | 60.0% | |
| CGCGCTGGAGGAACCATGAC+AGG | + | chr3_2:33730110-33730129 | Msa0403480:CDS | 65.0% | |
| GGACCACCACCAGCATGGCC+AGG | + | chr3_2:33726650-33726669 | Msa0403480:CDS | 70.0% | |
| CGTCCTGGCCATGCTGGTGG+TGG | - | chr3_2:33726656-33726675 | None:intergenic | 70.0% | |
| GCTCGTCCTGGCCATGCTGG+TGG | - | chr3_2:33726659-33726678 | None:intergenic | 70.0% | |
| TCCAGCGCGGCCAGCAGCAT+AGG | - | chr3_2:33730099-33730118 | None:intergenic | 70.0% | |
| TATGCTGCTGGCCGCGCTGG+AGG | + | chr3_2:33730098-33730117 | Msa0403480:CDS | 70.0% | |
| GCCTATGCTGCTGGCCGCGC+TGG | + | chr3_2:33730095-33730114 | Msa0403480:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 33726097 | 33731322 | 33726097 | ID=Msa0403480;Name=Msa0403480 |
| chr3_2 | mRNA | 33726097 | 33731322 | 33726097 | ID=Msa0403480-mRNA-1;Parent=Msa0403480;Name=Msa0403480-mRNA-1;_AED=0.11;_eAED=0.11;_QI=263|1|1|1|0.90|0.91|12|346|475 |
| chr3_2 | exon | 33726097 | 33726450 | 33726097 | ID=Msa0403480-mRNA-1:exon:6625;Parent=Msa0403480-mRNA-1 |
| chr3_2 | exon | 33726573 | 33726760 | 33726573 | ID=Msa0403480-mRNA-1:exon:6626;Parent=Msa0403480-mRNA-1 |
| chr3_2 | exon | 33726944 | 33727030 | 33726944 | ID=Msa0403480-mRNA-1:exon:6627;Parent=Msa0403480-mRNA-1 |
| chr3_2 | exon | 33727316 | 33727441 | 33727316 | ID=Msa0403480-mRNA-1:exon:6628;Parent=Msa0403480-mRNA-1 |
| chr3_2 | exon | 33727527 | 33727589 | 33727527 | ID=Msa0403480-mRNA-1:exon:6629;Parent=Msa0403480-mRNA-1 |
| chr3_2 | exon | 33728403 | 33728552 | 33728403 | ID=Msa0403480-mRNA-1:exon:6630;Parent=Msa0403480-mRNA-1 |
| chr3_2 | exon | 33729029 | 33729096 | 33729029 | ID=Msa0403480-mRNA-1:exon:6631;Parent=Msa0403480-mRNA-1 |
| chr3_2 | exon | 33729383 | 33729494 | 33729383 | ID=Msa0403480-mRNA-1:exon:6632;Parent=Msa0403480-mRNA-1 |
| chr3_2 | exon | 33729576 | 33729680 | 33729576 | ID=Msa0403480-mRNA-1:exon:6633;Parent=Msa0403480-mRNA-1 |
| chr3_2 | exon | 33729780 | 33729901 | 33729780 | ID=Msa0403480-mRNA-1:exon:6634;Parent=Msa0403480-mRNA-1 |
| chr3_2 | exon | 33730037 | 33730183 | 33730037 | ID=Msa0403480-mRNA-1:exon:6635;Parent=Msa0403480-mRNA-1 |
| chr3_2 | exon | 33730808 | 33731322 | 33730808 | ID=Msa0403480-mRNA-1:exon:6636;Parent=Msa0403480-mRNA-1 |
| chr3_2 | five_prime_UTR | 33726097 | 33726359 | 33726097 | ID=Msa0403480-mRNA-1:five_prime_utr;Parent=Msa0403480-mRNA-1 |
| chr3_2 | CDS | 33726360 | 33726450 | 33726360 | ID=Msa0403480-mRNA-1:cds;Parent=Msa0403480-mRNA-1 |
| chr3_2 | CDS | 33726573 | 33726760 | 33726573 | ID=Msa0403480-mRNA-1:cds;Parent=Msa0403480-mRNA-1 |
| chr3_2 | CDS | 33726944 | 33727030 | 33726944 | ID=Msa0403480-mRNA-1:cds;Parent=Msa0403480-mRNA-1 |
| chr3_2 | CDS | 33727316 | 33727441 | 33727316 | ID=Msa0403480-mRNA-1:cds;Parent=Msa0403480-mRNA-1 |
| chr3_2 | CDS | 33727527 | 33727589 | 33727527 | ID=Msa0403480-mRNA-1:cds;Parent=Msa0403480-mRNA-1 |
| chr3_2 | CDS | 33728403 | 33728552 | 33728403 | ID=Msa0403480-mRNA-1:cds;Parent=Msa0403480-mRNA-1 |
| chr3_2 | CDS | 33729029 | 33729096 | 33729029 | ID=Msa0403480-mRNA-1:cds;Parent=Msa0403480-mRNA-1 |
| chr3_2 | CDS | 33729383 | 33729494 | 33729383 | ID=Msa0403480-mRNA-1:cds;Parent=Msa0403480-mRNA-1 |
| chr3_2 | CDS | 33729576 | 33729680 | 33729576 | ID=Msa0403480-mRNA-1:cds;Parent=Msa0403480-mRNA-1 |
| chr3_2 | CDS | 33729780 | 33729901 | 33729780 | ID=Msa0403480-mRNA-1:cds;Parent=Msa0403480-mRNA-1 |
| chr3_2 | CDS | 33730037 | 33730183 | 33730037 | ID=Msa0403480-mRNA-1:cds;Parent=Msa0403480-mRNA-1 |
| chr3_2 | CDS | 33730808 | 33730976 | 33730808 | ID=Msa0403480-mRNA-1:cds;Parent=Msa0403480-mRNA-1 |
| chr3_2 | three_prime_UTR | 33730977 | 33731322 | 33730977 | ID=Msa0403480-mRNA-1:three_prime_utr;Parent=Msa0403480-mRNA-1 |
| Gene Sequence |
| Protein sequence |
