Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1075840 | XP_013449695.1 | 98.082 | 417 | 8 | 0 | 1 | 417 | 1 | 417 | 0.0 | 838 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1075840 | A0A072U3I2 | 98.082 | 417 | 8 | 0 | 1 | 417 | 1 | 417 | 0.0 | 838 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0755500 | Msa1075840 | 0.810623 | 1.051312e-50 | -8.615850e-47 |
| Msa0774560 | Msa1075840 | 0.802503 | 5.439564e-49 | -8.615850e-47 |
| Msa0833060 | Msa1075840 | 0.807624 | 4.614505e-50 | -8.615850e-47 |
| Msa0834830 | Msa1075840 | 0.805554 | 1.262342e-49 | -8.615850e-47 |
| Msa0195030 | Msa1075840 | -0.804807 | 1.809351e-49 | -8.615850e-47 |
| Msa0237180 | Msa1075840 | -0.818675 | 1.732226e-52 | -8.615850e-47 |
| Msa0370350 | Msa1075840 | 0.814604 | 1.415574e-51 | -8.615850e-47 |
| Msa1075840 | Msa1164830 | 0.806689 | 7.282309e-50 | -8.615850e-47 |
| Msa1075840 | Msa1181400 | 0.809787 | 1.592336e-50 | -8.615850e-47 |
| Msa1075840 | Msa1408900 | 0.803382 | 3.580630e-49 | -8.615850e-47 |
| Msa0274940 | Msa1075840 | -0.804219 | 2.399788e-49 | -8.615850e-47 |
| Msa0305910 | Msa1075840 | 0.800213 | 1.601182e-48 | -8.615850e-47 |
| Msa0315660 | Msa1075840 | -0.804410 | 2.189265e-49 | -8.615850e-47 |
| Msa0340870 | Msa1075840 | 0.800291 | 1.544032e-48 | -8.615850e-47 |
| Msa0540160 | Msa1075840 | 0.814216 | 1.724649e-51 | -8.615850e-47 |
| Msa0849290 | Msa1075840 | 0.801575 | 8.438465e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1075840 | MtrunA17_Chr7g0259491 | 98.082 | 417 | 8 | 0 | 1 | 417 | 1 | 417 | 0.0 | 838 |
| Msa1075840 | MtrunA17_Chr1g0196611 | 58.272 | 405 | 160 | 4 | 1 | 403 | 2 | 399 | 1.15e-155 | 446 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1075840 | AT4G02920.2 | 35.225 | 423 | 258 | 11 | 4 | 417 | 3 | 418 | 1.09e-67 | 221 |
| Msa1075840 | AT4G02920.1 | 34.977 | 426 | 254 | 13 | 4 | 417 | 3 | 417 | 4.36e-67 | 219 |
| Msa1075840 | AT1G03340.1 | 34.734 | 357 | 188 | 10 | 69 | 417 | 66 | 385 | 2.74e-46 | 164 |
Find 96 sgRNAs with CRISPR-Local
Find 258 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAACCTTAATTGCTCCTTTA+AGG | 0.086245 | 7_2:+74262522 | Msa1075840:CDS |
| TGTCATCAAACCATTTATTT+TGG | 0.095179 | 7_2:-74260237 | None:intergenic |
| TGATGGTCAAATCACATTTA+TGG | 0.142350 | 7_2:+74261021 | Msa1075840:CDS |
| TTGGGTTAGTTTGGCTTTCT+TGG | 0.148840 | 7_2:+74263944 | Msa1075840:CDS |
| CATAGTGCATACCTCCTTAA+AGG | 0.165058 | 7_2:-74262536 | None:intergenic |
| TTCAATACCGGGTTAGGATT+TGG | 0.235587 | 7_2:+74263925 | Msa1075840:CDS |
| CCTCCTTAAAGGAGCAATTA+AGG | 0.241525 | 7_2:-74262525 | None:intergenic |
| TTGATGTCAAATTTGTCATT+AGG | 0.253717 | 7_2:-74260938 | None:intergenic |
| AGTTTGTTGAACTGTAAATT+TGG | 0.267176 | 7_2:+74264148 | Msa1075840:three_prime_UTR |
| TGATGTCAAATTTGTCATTA+GGG | 0.277557 | 7_2:-74260937 | None:intergenic |
| GCTCGGGACCGGATTTCTTC+AGG | 0.277580 | 7_2:-74263786 | None:intergenic |
| CGATGGAAACCCAAAATAAA+TGG | 0.279469 | 7_2:+74260227 | Msa1075840:CDS |
| GGTTTGAGTTTCACTTTCTT+AGG | 0.281846 | 7_2:-74263637 | None:intergenic |
| AGTTCAACAAACTACATCTT+TGG | 0.285924 | 7_2:-74264138 | None:intergenic |
| TAAAGATTTCTTAGTGGAAC+TGG | 0.308051 | 7_2:-74264200 | None:intergenic |
| AAGATTACAGTTGATCTTGA+TGG | 0.311103 | 7_2:+74261004 | Msa1075840:CDS |
| GATGGTCAAATCACATTTAT+GGG | 0.314731 | 7_2:+74261022 | Msa1075840:CDS |
| TCAATACCGGGTTAGGATTT+GGG | 0.322556 | 7_2:+74263926 | Msa1075840:CDS |
| TGGTTCAGAAACTCGATAAA+AGG | 0.333502 | 7_2:+74264043 | Msa1075840:CDS |
| CAAATTTCTGCAGGTATTGC+TGG | 0.356707 | 7_2:+74263826 | Msa1075840:CDS |
| TATAAAAGAGATGATGAAAA+TGG | 0.366840 | 7_2:-74260914 | None:intergenic |
| GATTGCATCTTCACTGTAGA+TGG | 0.367369 | 7_2:-74262500 | None:intergenic |
| ATTCAGCGGTTCCAGACTTT+AGG | 0.367769 | 7_2:-74260811 | None:intergenic |
| TGGGTTAGTTTGGCTTTCTT+GGG | 0.372441 | 7_2:+74263945 | Msa1075840:CDS |
| GGTTAGGATTTGGGTTAGTT+TGG | 0.373556 | 7_2:+74263935 | Msa1075840:CDS |
| CACTGGTAACTGAGCAAGTC+TGG | 0.384605 | 7_2:-74260172 | None:intergenic |
| GAAATCTTTAAGACAACAAT+TGG | 0.385420 | 7_2:+74264213 | Msa1075840:three_prime_UTR |
| CTCTGATTTCCTTCAGAAGA+TGG | 0.388377 | 7_2:+74259687 | Msa1075840:exon |
| GCGTCCAGCTTGTTCAATAC+CGG | 0.391238 | 7_2:+74263913 | Msa1075840:CDS |
| AACTGTAATCTTTGAAGAAA+AGG | 0.393747 | 7_2:-74260993 | None:intergenic |
| ACAAGAAAATTGACAGAGAA+AGG | 0.405326 | 7_2:+74263674 | Msa1075840:CDS |
| AGCAAGAATGCAGGGAAGTT+GGG | 0.415107 | 7_2:+74264003 | Msa1075840:CDS |
| AGCTTGTTCAATACCGGGTT+AGG | 0.421443 | 7_2:+74263919 | Msa1075840:CDS |
| CAGCAAGAATGCAGGGAAGT+TGG | 0.427856 | 7_2:+74264002 | Msa1075840:CDS |
| TTGTCTTAAAGATTTCTTAG+TGG | 0.434096 | 7_2:-74264206 | None:intergenic |
| ATTTCAAAGCACCTAAAGTC+TGG | 0.434478 | 7_2:+74260800 | Msa1075840:CDS |
| TTGATGAAATTGCAGTTGTC+AGG | 0.446115 | 7_2:+74260872 | Msa1075840:CDS |
| GGGTTTGAAAGAAGAGGAAA+TGG | 0.452832 | 7_2:+74264023 | Msa1075840:CDS |
| GCCTCTCATACCTACCCTCC+AGG | 0.457429 | 7_2:+74259730 | Msa1075840:CDS |
| TGCTTGTTCCATACTTCAGC+AGG | 0.457775 | 7_2:+74261131 | Msa1075840:CDS |
| CCTTGGGTGTCAACTGATAC+AGG | 0.458456 | 7_2:-74260295 | None:intergenic |
| CTTGCTGATGCTGACAATTG+TGG | 0.469254 | 7_2:-74263986 | None:intergenic |
| GTAATATCATAGTTTGATGT+AGG | 0.476782 | 7_2:+74264262 | Msa1075840:three_prime_UTR |
| TTTCTTACACAAATTTCTGC+AGG | 0.485253 | 7_2:+74263817 | Msa1075840:CDS |
| GTCAGCATCAGCAAGAATGC+AGG | 0.487002 | 7_2:+74263994 | Msa1075840:CDS |
| GATAGACTTGGCTTAAGAAA+AGG | 0.490107 | 7_2:-74260196 | None:intergenic |
| TTGGATCTCTAAAGTGATGA+TGG | 0.493386 | 7_2:+74264167 | Msa1075840:three_prime_UTR |
| TGTTGACCATCAAGGACAAA+AGG | 0.493852 | 7_2:-74263732 | None:intergenic |
| TCTGCAGGTATTGCTGGGAC+AGG | 0.496932 | 7_2:+74263832 | Msa1075840:CDS |
| ATGTTAATTCCTCACCTCAA+TGG | 0.502348 | 7_2:+74260272 | Msa1075840:CDS |
| CGTCCAGCTTGTTCAATACC+GGG | 0.505852 | 7_2:+74263914 | Msa1075840:CDS |
| CTTGGGCAGTAAGTAAGCTA+AGG | 0.507686 | 7_2:+74263962 | Msa1075840:CDS |
| CATGTCAAAGAGCTTACATA+AGG | 0.508648 | 7_2:+74261093 | Msa1075840:CDS |
| AAGTCTATCTGCCGAGTCGA+TGG | 0.511435 | 7_2:+74260210 | Msa1075840:CDS |
| TGTTGTTGTAAGACAAGGCC+TGG | 0.512061 | 7_2:-74259748 | None:intergenic |
| ATTCCTTCCCTGAAGAAATC+CGG | 0.518312 | 7_2:+74263778 | Msa1075840:CDS |
| AGGATTAGAGATATTTACTT+CGG | 0.519138 | 7_2:+74264063 | Msa1075840:CDS |
| CAAGAAAATTGACAGAGAAA+GGG | 0.521736 | 7_2:+74263675 | Msa1075840:CDS |
| TGTAAGAAACTCAGAAAGCT+CGG | 0.527161 | 7_2:-74263803 | None:intergenic |
| AAACTCAGAAAGCTCGGGAC+CGG | 0.527375 | 7_2:-74263797 | None:intergenic |
| TAAAAGTACAGCATTTGAGC+AGG | 0.542688 | 7_2:-74260738 | None:intergenic |
| TTGATGTAGGAAGCATTGCT+TGG | 0.543808 | 7_2:+74264275 | Msa1075840:three_prime_UTR |
| ATCGACTCGGCAGATAGACT+TGG | 0.543922 | 7_2:-74260208 | None:intergenic |
| TCTGTAAACTAGCTTGTGGA+AGG | 0.546336 | 7_2:+74263878 | Msa1075840:CDS |
| AAATTTCTGCAGGTATTGCT+GGG | 0.554292 | 7_2:+74263827 | Msa1075840:CDS |
| TTTCATCAAGTCTAACATCA+AGG | 0.557831 | 7_2:-74260858 | None:intergenic |
| GCCTGGAGGGTAGGTATGAG+AGG | 0.559656 | 7_2:-74259731 | None:intergenic |
| GTCTCTGCACCATCTTCTGA+AGG | 0.565605 | 7_2:-74259696 | None:intergenic |
| GAAGTTGGGTTTGAAAGAAG+AGG | 0.568730 | 7_2:+74264017 | Msa1075840:CDS |
| TAAGACAAGGCCTGGAGGGT+AGG | 0.568949 | 7_2:-74259740 | None:intergenic |
| GTAATCTGTAAACTAGCTTG+TGG | 0.570115 | 7_2:+74263874 | Msa1075840:CDS |
| GTAAGAAACTCAGAAAGCTC+GGG | 0.580957 | 7_2:-74263802 | None:intergenic |
| TTGGGCAGTAAGTAAGCTAA+GGG | 0.581175 | 7_2:+74263963 | Msa1075840:CDS |
| CTGTAAACTAGCTTGTGGAA+GGG | 0.584100 | 7_2:+74263879 | Msa1075840:CDS |
| GGACCGGATTTCTTCAGGGA+AGG | 0.588819 | 7_2:-74263781 | None:intergenic |
| CCTTAATTGCTCCTTTAAGG+AGG | 0.588973 | 7_2:+74262525 | Msa1075840:CDS |
| GTTGTAAGACAAGGCCTGGA+GGG | 0.590880 | 7_2:-74259744 | None:intergenic |
| TCAACTGATACAGGCCATTG+AGG | 0.595001 | 7_2:-74260286 | None:intergenic |
| ACTATCTTTACGCGATTCAG+CGG | 0.596799 | 7_2:-74260825 | None:intergenic |
| ACAACAACAACTTCATCTCA+AGG | 0.596977 | 7_2:+74259765 | Msa1075840:CDS |
| ATGGATATCAATGAAGCAGA+AGG | 0.597338 | 7_2:+74262467 | Msa1075840:CDS |
| GATGATGAAAATGGTTGTTG+AGG | 0.605604 | 7_2:-74260905 | None:intergenic |
| TAATATTATTAATATTTGTG+TGG | 0.610596 | 7_2:-74259621 | None:intergenic |
| TAACCCGGTATTGAACAAGC+TGG | 0.611936 | 7_2:-74263917 | None:intergenic |
| AACTAACCCAAATCCTAACC+CGG | 0.615247 | 7_2:-74263932 | None:intergenic |
| TCAGCATCAGCAAGAATGCA+GGG | 0.620127 | 7_2:+74263995 | Msa1075840:CDS |
| TCTTGAAGAAAATACAGCAA+AGG | 0.629477 | 7_2:-74260965 | None:intergenic |
| TTGGCTTAAGAAAAGGACAC+TGG | 0.645172 | 7_2:-74260189 | None:intergenic |
| CCTGTATCAGTTGACACCCA+AGG | 0.646830 | 7_2:+74260295 | Msa1075840:CDS |
| TGATACAGGCCATTGAGGTG+AGG | 0.651565 | 7_2:-74260281 | None:intergenic |
| GGGTAGGTATGAGAGGCCAT+CGG | 0.654610 | 7_2:-74259724 | None:intergenic |
| AGATATTTACTTCGGCTCTG+CGG | 0.655008 | 7_2:+74264071 | Msa1075840:CDS |
| GGTGCAGAGACTGTGTCCGA+TGG | 0.661426 | 7_2:+74259708 | Msa1075840:CDS |
| GTTGTTGTTGTTGTAAGACA+AGG | 0.689463 | 7_2:-74259753 | None:intergenic |
| TGTTGTAAGACAAGGCCTGG+AGG | 0.699115 | 7_2:-74259745 | None:intergenic |
| TTACAGATAGTAGAACAGCA+AGG | 0.718556 | 7_2:-74263855 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTTATAATAATTATTAT+TGG | - | chr7_2:74264366-74264385 | None:intergenic | 0.0% |
| !!! | TTTTTAATATTTTCCATGAT+AGG | + | chr7_2:74260114-74260133 | Msa1075840:intron | 15.0% |
| !! | TAGAAAAATAAACGATAAAA+TGG | - | chr7_2:74260335-74260354 | None:intergenic | 15.0% |
| !! | AAAATCTTATAAACATAGAA+TGG | - | chr7_2:74261219-74261238 | None:intergenic | 15.0% |
| !! | ATATTTACAAAACATCTAAA+AGG | - | chr7_2:74261315-74261334 | None:intergenic | 15.0% |
| !!! | AAATAACTGTTATTGTATTT+TGG | + | chr7_2:74262918-74262937 | Msa1075840:intron | 15.0% |
| !! | GAAACATTTACAATAAAAAT+TGG | - | chr7_2:74263146-74263165 | None:intergenic | 15.0% |
| !!! | TTTATTGTAAATGTTTCTTT+TGG | + | chr7_2:74263149-74263168 | Msa1075840:intron | 15.0% |
| !!! | CTACTTTTTATTCAAAAATT+TGG | + | chr7_2:74263175-74263194 | Msa1075840:intron | 15.0% |
| !!! | TGTAATATAGAATTTTGTTA+TGG | + | chr7_2:74264308-74264327 | Msa1075840:three_prime_UTR | 15.0% |
| !!! | TCATGTTTTCTAATTGTTTA+TGG | + | chr7_2:74259806-74259825 | Msa1075840:intron | 20.0% |
| !!! | TTTCCTAAATGTTTAACTTT+CGG | + | chr7_2:74259859-74259878 | Msa1075840:intron | 20.0% |
| !!! | CTAGTTCTAATATATGATAA+TGG | - | chr7_2:74260379-74260398 | None:intergenic | 20.0% |
| !! | ACTGATAACAATTTGAAAAA+TGG | - | chr7_2:74260529-74260548 | None:intergenic | 20.0% |
| !! | TAGATACAACATAAAAACAA+AGG | - | chr7_2:74260674-74260693 | None:intergenic | 20.0% |
| !!! | TTTTATGTTGTATCTAATTC+TGG | + | chr7_2:74260678-74260697 | Msa1075840:intron | 20.0% |
| !! | TATAAAAGAGATGATGAAAA+TGG | - | chr7_2:74260917-74260936 | None:intergenic | 20.0% |
| !! | TTATAATCTACGTTGATATT+TGG | + | chr7_2:74261182-74261201 | Msa1075840:intron | 20.0% |
| !! | TAAATATTAGAGTCGTATTT+CGG | + | chr7_2:74261328-74261347 | Msa1075840:intron | 20.0% |
| !!! | ATTAGTAATGTTAGTTTCTA+AGG | - | chr7_2:74261408-74261427 | None:intergenic | 20.0% |
| !!! | GTTAGTCTGAATTAAATTTT+TGG | + | chr7_2:74261962-74261981 | Msa1075840:intron | 20.0% |
| !! | ATAAAATTAGTGTAACGAAT+AGG | - | chr7_2:74262121-74262140 | None:intergenic | 20.0% |
| !! | ATTCAACTATCATGAATAAA+AGG | - | chr7_2:74262271-74262290 | None:intergenic | 20.0% |
| !!! | CAGACACAAATTATATATTT+TGG | + | chr7_2:74263073-74263092 | Msa1075840:intron | 20.0% |
| !! | AAAAATTACTGTAAGCAATT+AGG | - | chr7_2:74263571-74263590 | None:intergenic | 20.0% |
| ! | GAAAGTTAAACATTTAGGAA+AGG | - | chr7_2:74259860-74259879 | None:intergenic | 25.0% |
| !! | TTCCTAAATGTTTAACTTTC+GGG | + | chr7_2:74259860-74259879 | Msa1075840:intron | 25.0% |
| !!! | TCTTAATTTGCACAATTCAA+AGG | + | chr7_2:74259913-74259932 | Msa1075840:intron | 25.0% |
| !! | TTTGCTACTTATTGTCTATA+TGG | + | chr7_2:74260015-74260034 | Msa1075840:intron | 25.0% |
| !!! | GTCATCAAACCATTTATTTT+GGG | - | chr7_2:74260239-74260258 | None:intergenic | 25.0% |
| !! | TGTCATCAAACCATTTATTT+TGG | - | chr7_2:74260240-74260259 | None:intergenic | 25.0% |
| ! | TGATGTCAAATTTGTCATTA+GGG | - | chr7_2:74260940-74260959 | None:intergenic | 25.0% |
| ! | TTGATGTCAAATTTGTCATT+AGG | - | chr7_2:74260941-74260960 | None:intergenic | 25.0% |
| !! | AACTGTAATCTTTGAAGAAA+AGG | - | chr7_2:74260996-74261015 | None:intergenic | 25.0% |
| ! | AAAACATGTCTTAATGATGA+AGG | + | chr7_2:74261457-74261476 | Msa1075840:intron | 25.0% |
| ! | ACCGCAAAAAGTTATTAAAA+CGG | - | chr7_2:74261752-74261771 | None:intergenic | 25.0% |
| !! | TCGTTACACTAATTTTATGT+CGG | + | chr7_2:74262123-74262142 | Msa1075840:intron | 25.0% |
| ! | AAAAGGTTAAAATCTATAGC+TGG | - | chr7_2:74262254-74262273 | None:intergenic | 25.0% |
| ! | CAAATGTATTGAATAGTTCA+AGG | - | chr7_2:74262317-74262336 | None:intergenic | 25.0% |
| ! | TAAAAAAAAGGTCAACAATC+AGG | - | chr7_2:74262576-74262595 | None:intergenic | 25.0% |
| ! | AGCATATCACAGTAAAAAAA+AGG | - | chr7_2:74262588-74262607 | None:intergenic | 25.0% |
| ! | CAACATTTATATGCTAAACA+AGG | - | chr7_2:74262631-74262650 | None:intergenic | 25.0% |
| !!! | TGCAGATAAATCTTATTTTC+TGG | + | chr7_2:74262739-74262758 | Msa1075840:intron | 25.0% |
| !!! | ATCTTATTTTCTGGTGTTTT+AGG | + | chr7_2:74262748-74262767 | Msa1075840:intron | 25.0% |
| ! | ACTAATTGTTATGTGTAGTT+TGG | + | chr7_2:74262821-74262840 | Msa1075840:intron | 25.0% |
| ! | ATTCAAAGAATCAGTTTAGA+TGG | - | chr7_2:74263331-74263350 | None:intergenic | 25.0% |
| ! | TCATGTTGAAAATTTATCTG+TGG | - | chr7_2:74263434-74263453 | None:intergenic | 25.0% |
| ! | AGGATTAGAGATATTTACTT+CGG | + | chr7_2:74264063-74264082 | Msa1075840:CDS | 25.0% |
| !!! | AGTTTGTTGAACTGTAAATT+TGG | + | chr7_2:74264148-74264167 | Msa1075840:three_prime_UTR | 25.0% |
| ! | TTGTCTTAAAGATTTCTTAG+TGG | - | chr7_2:74264209-74264228 | None:intergenic | 25.0% |
| !!! | GAAATCTTTAAGACAACAAT+TGG | + | chr7_2:74264213-74264232 | Msa1075840:three_prime_UTR | 25.0% |
| ! | GTAATATCATAGTTTGATGT+AGG | + | chr7_2:74264262-74264281 | Msa1075840:three_prime_UTR | 25.0% |
| ! | TCCTAAATGTTTAACTTTCG+GGG | + | chr7_2:74259861-74259880 | Msa1075840:intron | 30.0% |
| ATACAAGGAAGAGTTTGTAA+CGG | - | chr7_2:74259953-74259972 | None:intergenic | 30.0% | |
| AAATTAACGCTGTGAATACA+AGG | - | chr7_2:74259968-74259987 | None:intergenic | 30.0% | |
| ACGCATTCAATATGCAATAT+CGG | - | chr7_2:74260445-74260464 | None:intergenic | 30.0% | |
| ! | ACCAATTTGTTTCATTGACA+TGG | + | chr7_2:74260602-74260621 | Msa1075840:intron | 30.0% |
| TCCATGTCAATGAAACAAAT+TGG | - | chr7_2:74260606-74260625 | None:intergenic | 30.0% | |
| TTTCATCAAGTCTAACATCA+AGG | - | chr7_2:74260861-74260880 | None:intergenic | 30.0% | |
| TCTTGAAGAAAATACAGCAA+AGG | - | chr7_2:74260968-74260987 | None:intergenic | 30.0% | |
| AAGATTACAGTTGATCTTGA+TGG | + | chr7_2:74261004-74261023 | Msa1075840:CDS | 30.0% | |
| TGATGGTCAAATCACATTTA+TGG | + | chr7_2:74261021-74261040 | Msa1075840:CDS | 30.0% | |
| GATGGTCAAATCACATTTAT+GGG | + | chr7_2:74261022-74261041 | Msa1075840:CDS | 30.0% | |
| AAGTTGTGCATAATTGATAG+CGG | + | chr7_2:74261540-74261559 | Msa1075840:intron | 30.0% | |
| ACTTAGGTTTAAACTTCTAG+CGG | + | chr7_2:74261585-74261604 | Msa1075840:intron | 30.0% | |
| !! | TATTTTCTCTGGTTTCTTAC+TGG | - | chr7_2:74261680-74261699 | None:intergenic | 30.0% |
| ACAACTCATATCTGACTATT+TGG | + | chr7_2:74261704-74261723 | Msa1075840:intron | 30.0% | |
| CGCAAAAAGTTATTAAAACG+GGG | - | chr7_2:74261750-74261769 | None:intergenic | 30.0% | |
| CCGCAAAAAGTTATTAAAAC+GGG | - | chr7_2:74261751-74261770 | None:intergenic | 30.0% | |
| !! | CCCGTTTTAATAACTTTTTG+CGG | + | chr7_2:74261748-74261767 | Msa1075840:intron | 30.0% |
| GGTTAATGCAAAATAAACCA+GGG | - | chr7_2:74261814-74261833 | None:intergenic | 30.0% | |
| TGGTTAATGCAAAATAAACC+AGG | - | chr7_2:74261815-74261834 | None:intergenic | 30.0% | |
| AAACAAGTAAAACAAGAGGT+GGG | - | chr7_2:74261917-74261936 | None:intergenic | 30.0% | |
| AAAACAAGTAAAACAAGAGG+TGG | - | chr7_2:74261918-74261937 | None:intergenic | 30.0% | |
| !!! | ACCTCTTGTTTTACTTGTTT+TGG | + | chr7_2:74261917-74261936 | Msa1075840:intron | 30.0% |
| ACCAAAACAAGTAAAACAAG+AGG | - | chr7_2:74261921-74261940 | None:intergenic | 30.0% | |
| !!! | CTTGTTTTACTTGTTTTGGT+AGG | + | chr7_2:74261921-74261940 | Msa1075840:intron | 30.0% |
| TCTATCTCACTGTATTATGT+TGG | + | chr7_2:74262146-74262165 | Msa1075840:intron | 30.0% | |
| TGATAACCTTTCTCTAATAG+AGG | + | chr7_2:74262212-74262231 | Msa1075840:intron | 30.0% | |
| GATAACCTTTCTCTAATAGA+GGG | + | chr7_2:74262213-74262232 | Msa1075840:intron | 30.0% | |
| ATAACCTTTCTCTAATAGAG+GGG | + | chr7_2:74262214-74262233 | Msa1075840:intron | 30.0% | |
| GATCCTTTCATTATGTTCTT+CGG | + | chr7_2:74262346-74262365 | Msa1075840:intron | 30.0% | |
| TTACCGAAGAACATAATGAA+AGG | - | chr7_2:74262352-74262371 | None:intergenic | 30.0% | |
| CAAATCAAGAGACTAAAAAG+TGG | - | chr7_2:74262388-74262407 | None:intergenic | 30.0% | |
| !! | CACTTTTTAGTCTCTTGATT+TGG | + | chr7_2:74262386-74262405 | Msa1075840:intron | 30.0% |
| ! | TGTGATATGCTCTGATATTT+TGG | + | chr7_2:74262597-74262616 | Msa1075840:intron | 30.0% |
| ATTTATATGCTAAACAAGGC+TGG | - | chr7_2:74262627-74262646 | None:intergenic | 30.0% | |
| AATTGTTATGTGTAGTTTGG+CGG | + | chr7_2:74262824-74262843 | Msa1075840:intron | 30.0% | |
| !! | AAAGTACTGCTTTCTAAGTT+TGG | + | chr7_2:74262965-74262984 | Msa1075840:intron | 30.0% |
| !! | TACGAGTTATTTTCATTGAC+TGG | - | chr7_2:74263015-74263034 | None:intergenic | 30.0% |
| ! | CAAATGGATGTTTTCTGTAA+AGG | + | chr7_2:74263222-74263241 | Msa1075840:intron | 30.0% |
| CATGAATACTTGAGATTATG+AGG | + | chr7_2:74263300-74263319 | Msa1075840:intron | 30.0% | |
| AGAAGATAATCCTTTCTCAT+CGG | - | chr7_2:74263360-74263379 | None:intergenic | 30.0% | |
| TTTAATACTACCATCAGACA+AGG | + | chr7_2:74263392-74263411 | Msa1075840:intron | 30.0% | |
| TTAATACTACCATCAGACAA+GGG | + | chr7_2:74263393-74263412 | Msa1075840:intron | 30.0% | |
| ! | ACTTTTCAGCTTCAATTGTT+TGG | + | chr7_2:74263462-74263481 | Msa1075840:intron | 30.0% |
| !! | CTTAAATGAAAGCACTAATG+TGG | - | chr7_2:74263488-74263507 | None:intergenic | 30.0% |
| GTATATTTCAGTAGGTATGT+AGG | - | chr7_2:74263544-74263563 | None:intergenic | 30.0% | |
| ! | TAGGCATTGTATATTTCAGT+AGG | - | chr7_2:74263552-74263571 | None:intergenic | 30.0% |
| ! | TTCTTGTTCTTCTTTTGTGA+TGG | - | chr7_2:74263661-74263680 | None:intergenic | 30.0% |
| ACAAGAAAATTGACAGAGAA+AGG | + | chr7_2:74263674-74263693 | Msa1075840:CDS | 30.0% | |
| CAAGAAAATTGACAGAGAAA+GGG | + | chr7_2:74263675-74263694 | Msa1075840:CDS | 30.0% | |
| !!! | TTTTTTCTTGTTGACCATCA+AGG | - | chr7_2:74263743-74263762 | None:intergenic | 30.0% |
| TGGTCAACAAGAAAAAAAGT+CGG | + | chr7_2:74263746-74263765 | Msa1075840:CDS | 30.0% | |
| TTTCTTACACAAATTTCTGC+AGG | + | chr7_2:74263817-74263836 | Msa1075840:CDS | 30.0% | |
| AGTTCAACAAACTACATCTT+TGG | - | chr7_2:74264141-74264160 | None:intergenic | 30.0% | |
| TAAAGATTTCTTAGTGGAAC+TGG | - | chr7_2:74264203-74264222 | None:intergenic | 30.0% | |
| ! | GTTGTTGTTGTTGTAAGACA+AGG | - | chr7_2:74259756-74259775 | None:intergenic | 35.0% |
| ACAACAACAACTTCATCTCA+AGG | + | chr7_2:74259765-74259784 | Msa1075840:CDS | 35.0% | |
| ! | CCTAAATGTTTAACTTTCGG+GGG | + | chr7_2:74259862-74259881 | Msa1075840:intron | 35.0% |
| !!! | GCTAGTTTTGCTTAATAGTC+TGG | + | chr7_2:74260051-74260070 | Msa1075840:intron | 35.0% |
| ! | AACGTTTGATAGTCCTATCA+TGG | - | chr7_2:74260130-74260149 | None:intergenic | 35.0% |
| ! | AACGTTTTTGCCTTCTTCTT+TGG | + | chr7_2:74260144-74260163 | Msa1075840:CDS | 35.0% |
| GATAGACTTGGCTTAAGAAA+AGG | - | chr7_2:74260199-74260218 | None:intergenic | 35.0% | |
| CGATGGAAACCCAAAATAAA+TGG | + | chr7_2:74260227-74260246 | Msa1075840:CDS | 35.0% | |
| ATGTTAATTCCTCACCTCAA+TGG | + | chr7_2:74260272-74260291 | Msa1075840:CDS | 35.0% | |
| GGTTAGATGAAACATACCTT+GGG | - | chr7_2:74260314-74260333 | None:intergenic | 35.0% | |
| TGGTTAGATGAAACATACCT+TGG | - | chr7_2:74260315-74260334 | None:intergenic | 35.0% | |
| ! | TAAAAGTACAGCATTTGAGC+AGG | - | chr7_2:74260741-74260760 | None:intergenic | 35.0% |
| ! | TGCTCAAATGCTGTACTTTT+AGG | + | chr7_2:74260740-74260759 | Msa1075840:CDS | 35.0% |
| ! | AATGCTGTACTTTTAGGCTT+TGG | + | chr7_2:74260746-74260765 | Msa1075840:CDS | 35.0% |
| ! | ATTTCAAAGCACCTAAAGTC+TGG | + | chr7_2:74260800-74260819 | Msa1075840:CDS | 35.0% |
| TTGATGAAATTGCAGTTGTC+AGG | + | chr7_2:74260872-74260891 | Msa1075840:CDS | 35.0% | |
| GATGATGAAAATGGTTGTTG+AGG | - | chr7_2:74260908-74260927 | None:intergenic | 35.0% | |
| CATGTCAAAGAGCTTACATA+AGG | + | chr7_2:74261093-74261112 | Msa1075840:CDS | 35.0% | |
| !! | TGTTTTTACCTGCTGAAGTA+TGG | - | chr7_2:74261142-74261161 | None:intergenic | 35.0% |
| ATATTAGAGTCGTATTTCGG+CGG | + | chr7_2:74261331-74261350 | Msa1075840:intron | 35.0% | |
| CAGCAACATGTATCAAATGA+TGG | - | chr7_2:74261500-74261519 | None:intergenic | 35.0% | |
| ! | GCACAACTTCATTTTCTACT+AGG | - | chr7_2:74261529-74261548 | None:intergenic | 35.0% |
| GAGAGAAATAATGTGAAAGC+AGG | + | chr7_2:74261624-74261643 | Msa1075840:intron | 35.0% | |
| ! | GAGTTGTCTTCTATTTTCTC+TGG | - | chr7_2:74261691-74261710 | None:intergenic | 35.0% |
| AATGCAAAATAAACCAGGGA+CGG | - | chr7_2:74261810-74261829 | None:intergenic | 35.0% | |
| AATACACAAAATATGCGCAG+TGG | - | chr7_2:74261835-74261854 | None:intergenic | 35.0% | |
| CTTCATTCTTTCTGATCATG+CGG | - | chr7_2:74261866-74261885 | None:intergenic | 35.0% | |
| TGTATTATGTTGGCAACTGA+GGG | + | chr7_2:74262156-74262175 | Msa1075840:intron | 35.0% | |
| ACATGTGCTGAGATTCTATA+TGG | + | chr7_2:74262439-74262458 | Msa1075840:intron | 35.0% | |
| GAGATTCTATATGGACAGAA+TGG | + | chr7_2:74262448-74262467 | Msa1075840:intron | 35.0% | |
| ATGGATATCAATGAAGCAGA+AGG | + | chr7_2:74262467-74262486 | Msa1075840:CDS | 35.0% | |
| CAACCTTAATTGCTCCTTTA+AGG | + | chr7_2:74262522-74262541 | Msa1075840:CDS | 35.0% | |
| ATGTATTCACCACAGAAAGA+AGG | + | chr7_2:74262708-74262727 | Msa1075840:intron | 35.0% | |
| ACTGCTTTCTAAGTTTGGTA+TGG | + | chr7_2:74262970-74262989 | Msa1075840:intron | 35.0% | |
| GCTATTCTTTGCAAGACAAA+TGG | + | chr7_2:74263206-74263225 | Msa1075840:intron | 35.0% | |
| ! | GGTTTGAGTTTCACTTTCTT+AGG | - | chr7_2:74263640-74263659 | None:intergenic | 35.0% |
| TGTAAGAAACTCAGAAAGCT+CGG | - | chr7_2:74263806-74263825 | None:intergenic | 35.0% | |
| ! | AAATTTCTGCAGGTATTGCT+GGG | + | chr7_2:74263827-74263846 | Msa1075840:CDS | 35.0% |
| TTACAGATAGTAGAACAGCA+AGG | - | chr7_2:74263858-74263877 | None:intergenic | 35.0% | |
| ! | GTAATCTGTAAACTAGCTTG+TGG | + | chr7_2:74263874-74263893 | Msa1075840:CDS | 35.0% |
| TGGTTCAGAAACTCGATAAA+AGG | + | chr7_2:74264043-74264062 | Msa1075840:CDS | 35.0% | |
| !! | TTGGATCTCTAAAGTGATGA+TGG | + | chr7_2:74264167-74264186 | Msa1075840:three_prime_UTR | 35.0% |
| CTCTGATTTCCTTCAGAAGA+TGG | + | chr7_2:74259687-74259706 | Msa1075840:exon | 40.0% | |
| CCCCCGAAAGTTAAACATTT+AGG | - | chr7_2:74259865-74259884 | None:intergenic | 40.0% | |
| TTAACTTTCGGGGGAAAGTT+TGG | + | chr7_2:74259871-74259890 | Msa1075840:intron | 40.0% | |
| TAACTTTCGGGGGAAAGTTT+GGG | + | chr7_2:74259872-74259891 | Msa1075840:intron | 40.0% | |
| !!! | TCTGGTTTTGCCAAAGAAGA+AGG | - | chr7_2:74260157-74260176 | None:intergenic | 40.0% |
| TTGGCTTAAGAAAAGGACAC+TGG | - | chr7_2:74260192-74260211 | None:intergenic | 40.0% | |
| !!! | ATTTTGGGTTTCCATCGACT+CGG | - | chr7_2:74260224-74260243 | None:intergenic | 40.0% |
| GCATATTGAATGCGTGTTAG+TGG | + | chr7_2:74260450-74260469 | Msa1075840:intron | 40.0% | |
| ACTATCTTTACGCGATTCAG+CGG | - | chr7_2:74260828-74260847 | None:intergenic | 40.0% | |
| TATTAGAGTCGTATTTCGGC+GGG | + | chr7_2:74261332-74261351 | Msa1075840:intron | 40.0% | |
| ! | CTATAGGAGTTCTAACCAAG+AGG | + | chr7_2:74261369-74261388 | Msa1075840:intron | 40.0% |
| TTAAACTTCTAGCGGTGCAA+AGG | + | chr7_2:74261593-74261612 | Msa1075840:intron | 40.0% | |
| AATGCTCAGCCAAAAGAAGA+CGG | + | chr7_2:74261650-74261669 | Msa1075840:intron | 40.0% | |
| ! | TTTCTCTGGTTTCTTACTGG+AGG | - | chr7_2:74261677-74261696 | None:intergenic | 40.0% |
| GGACGGTTACAACTGAAATA+TGG | - | chr7_2:74261793-74261812 | None:intergenic | 40.0% | |
| AATGAGTGTATGTGTGTGTG+TGG | - | chr7_2:74262086-74262105 | None:intergenic | 40.0% | |
| CTGTATTATGTTGGCAACTG+AGG | + | chr7_2:74262155-74262174 | Msa1075840:intron | 40.0% | |
| GATTGCATCTTCACTGTAGA+TGG | - | chr7_2:74262503-74262522 | None:intergenic | 40.0% | |
| CCTCCTTAAAGGAGCAATTA+AGG | - | chr7_2:74262528-74262547 | None:intergenic | 40.0% | |
| ! | CCTTAATTGCTCCTTTAAGG+AGG | + | chr7_2:74262525-74262544 | Msa1075840:CDS | 40.0% |
| CATAGTGCATACCTCCTTAA+AGG | - | chr7_2:74262539-74262558 | None:intergenic | 40.0% | |
| ! | AGGTGTTATCGAATGCTTTG+AGG | + | chr7_2:74262768-74262787 | Msa1075840:intron | 40.0% |
| ! | GGTGTTATCGAATGCTTTGA+GGG | + | chr7_2:74262769-74262788 | Msa1075840:intron | 40.0% |
| ! | GTCTGCTTTGTTCTTGAGAA+TGG | - | chr7_2:74263058-74263077 | None:intergenic | 40.0% |
| ATAATCCTTTCTCATCGGAC+AGG | - | chr7_2:74263355-74263374 | None:intergenic | 40.0% | |
| ACTTTCATACCCTTGTCTGA+TGG | - | chr7_2:74263405-74263424 | None:intergenic | 40.0% | |
| ! | CAGACAAGGGTATGAAAGTA+TGG | + | chr7_2:74263406-74263425 | Msa1075840:intron | 40.0% |
| TGTTGACCATCAAGGACAAA+AGG | - | chr7_2:74263735-74263754 | None:intergenic | 40.0% | |
| ATTCCTTCCCTGAAGAAATC+CGG | + | chr7_2:74263778-74263797 | Msa1075840:CDS | 40.0% | |
| GTAAGAAACTCAGAAAGCTC+GGG | - | chr7_2:74263805-74263824 | None:intergenic | 40.0% | |
| ! | CAAATTTCTGCAGGTATTGC+TGG | + | chr7_2:74263826-74263845 | Msa1075840:CDS | 40.0% |
| ! | TCTGTAAACTAGCTTGTGGA+AGG | + | chr7_2:74263878-74263897 | Msa1075840:CDS | 40.0% |
| ! | CTGTAAACTAGCTTGTGGAA+GGG | + | chr7_2:74263879-74263898 | Msa1075840:CDS | 40.0% |
| ! | TTCAATACCGGGTTAGGATT+TGG | + | chr7_2:74263925-74263944 | Msa1075840:CDS | 40.0% |
| ! | TCAATACCGGGTTAGGATTT+GGG | + | chr7_2:74263926-74263945 | Msa1075840:CDS | 40.0% |
| AACTAACCCAAATCCTAACC+CGG | - | chr7_2:74263935-74263954 | None:intergenic | 40.0% | |
| !! | GGTTAGGATTTGGGTTAGTT+TGG | + | chr7_2:74263935-74263954 | Msa1075840:CDS | 40.0% |
| !! | TTGGGTTAGTTTGGCTTTCT+TGG | + | chr7_2:74263944-74263963 | Msa1075840:CDS | 40.0% |
| !! | TGGGTTAGTTTGGCTTTCTT+GGG | + | chr7_2:74263945-74263964 | Msa1075840:CDS | 40.0% |
| TTGGGCAGTAAGTAAGCTAA+GGG | + | chr7_2:74263963-74263982 | Msa1075840:CDS | 40.0% | |
| GAAGTTGGGTTTGAAAGAAG+AGG | + | chr7_2:74264017-74264036 | Msa1075840:CDS | 40.0% | |
| GGGTTTGAAAGAAGAGGAAA+TGG | + | chr7_2:74264023-74264042 | Msa1075840:CDS | 40.0% | |
| AGATATTTACTTCGGCTCTG+CGG | + | chr7_2:74264071-74264090 | Msa1075840:CDS | 40.0% | |
| !! | TTGATGTAGGAAGCATTGCT+TGG | + | chr7_2:74264275-74264294 | Msa1075840:three_prime_UTR | 40.0% |
| TGTTGTTGTAAGACAAGGCC+TGG | - | chr7_2:74259751-74259770 | None:intergenic | 45.0% | |
| AACTTTCGGGGGAAAGTTTG+GGG | + | chr7_2:74259873-74259892 | Msa1075840:intron | 45.0% | |
| TCAACTGATACAGGCCATTG+AGG | - | chr7_2:74260289-74260308 | None:intergenic | 45.0% | |
| ATTCAGCGGTTCCAGACTTT+AGG | - | chr7_2:74260814-74260833 | None:intergenic | 45.0% | |
| TGCTTGTTCCATACTTCAGC+AGG | + | chr7_2:74261131-74261150 | Msa1075840:CDS | 45.0% | |
| ! | AGTTCTAACCAAGAGGCTCA+GGG | + | chr7_2:74261376-74261395 | Msa1075840:intron | 45.0% |
| AAGTTCCTTTACCCTACAGC+AGG | - | chr7_2:74261569-74261588 | None:intergenic | 45.0% | |
| GCTGTAGGGTAAAGGAACTT+AGG | + | chr7_2:74261569-74261588 | Msa1075840:intron | 45.0% | |
| TAGCGGTGCAAAGGAAGTTA+GGG | + | chr7_2:74261602-74261621 | Msa1075840:intron | 45.0% | |
| ATTTCAGTTGTAACCGTCCC+TGG | + | chr7_2:74261794-74261813 | Msa1075840:intron | 45.0% | |
| TTATGTTGGCAACTGAGGGA+TGG | + | chr7_2:74262160-74262179 | Msa1075840:intron | 45.0% | |
| ACTGAGGGATGGCATTAAAC+AGG | + | chr7_2:74262171-74262190 | Msa1075840:intron | 45.0% | |
| TGAGCCCCTCTATTAGAGAA+AGG | - | chr7_2:74262221-74262240 | None:intergenic | 45.0% | |
| TCACCACAGAAAGAAGGATG+TGG | + | chr7_2:74262714-74262733 | Msa1075840:intron | 45.0% | |
| CACCACAGAAAGAAGGATGT+GGG | + | chr7_2:74262715-74262734 | Msa1075840:intron | 45.0% | |
| CTGTGTTTCAGTGAGCTTCA+CGG | + | chr7_2:74262874-74262893 | Msa1075840:intron | 45.0% | |
| ! | GGAGCACTATCATATGCTAG+AGG | + | chr7_2:74262895-74262914 | Msa1075840:intron | 45.0% |
| GAATACCTGTCCGATGAGAA+AGG | + | chr7_2:74263347-74263366 | Msa1075840:intron | 45.0% | |
| AGGTCAGACTACGAACAACT+TGG | - | chr7_2:74263524-74263543 | None:intergenic | 45.0% | |
| ! | TGAGAGCCTTTTGTCCTTGA+TGG | + | chr7_2:74263726-74263745 | Msa1075840:CDS | 45.0% |
| ! | TAACCCGGTATTGAACAAGC+TGG | - | chr7_2:74263920-74263939 | None:intergenic | 45.0% |
| ! | AGCTTGTTCAATACCGGGTT+AGG | + | chr7_2:74263919-74263938 | Msa1075840:CDS | 45.0% |
| CTTGGGCAGTAAGTAAGCTA+AGG | + | chr7_2:74263962-74263981 | Msa1075840:CDS | 45.0% | |
| CTTGCTGATGCTGACAATTG+TGG | - | chr7_2:74263989-74264008 | None:intergenic | 45.0% | |
| TCAGCATCAGCAAGAATGCA+GGG | + | chr7_2:74263995-74264014 | Msa1075840:CDS | 45.0% | |
| AGCAAGAATGCAGGGAAGTT+GGG | + | chr7_2:74264003-74264022 | Msa1075840:CDS | 45.0% | |
| GTCTCTGCACCATCTTCTGA+AGG | - | chr7_2:74259699-74259718 | None:intergenic | 50.0% | |
| GTTGTAAGACAAGGCCTGGA+GGG | - | chr7_2:74259747-74259766 | None:intergenic | 50.0% | |
| TGTTGTAAGACAAGGCCTGG+AGG | - | chr7_2:74259748-74259767 | None:intergenic | 50.0% | |
| CACTGGTAACTGAGCAAGTC+TGG | - | chr7_2:74260175-74260194 | None:intergenic | 50.0% | |
| !! | ATCGACTCGGCAGATAGACT+TGG | - | chr7_2:74260211-74260230 | None:intergenic | 50.0% |
| AAGTCTATCTGCCGAGTCGA+TGG | + | chr7_2:74260210-74260229 | Msa1075840:CDS | 50.0% | |
| TGATACAGGCCATTGAGGTG+AGG | - | chr7_2:74260284-74260303 | None:intergenic | 50.0% | |
| CCTTGGGTGTCAACTGATAC+AGG | - | chr7_2:74260298-74260317 | None:intergenic | 50.0% | |
| CCTGTATCAGTTGACACCCA+AGG | + | chr7_2:74260295-74260314 | Msa1075840:CDS | 50.0% | |
| TATTTCGGCGGGTGAGGTAA+GGG | + | chr7_2:74261343-74261362 | Msa1075840:intron | 50.0% | |
| ! | GAGTTCTAACCAAGAGGCTC+AGG | + | chr7_2:74261375-74261394 | Msa1075840:intron | 50.0% |
| CTAGCGGTGCAAAGGAAGTT+AGG | + | chr7_2:74261601-74261620 | Msa1075840:intron | 50.0% | |
| ! | ACTGGAGGACCGTCTTCTTT+TGG | - | chr7_2:74261662-74261681 | None:intergenic | 50.0% |
| AGCCCACATCCTTCTTTCTG+TGG | - | chr7_2:74262720-74262739 | None:intergenic | 50.0% | |
| CGTGAAGCTCACTGAAACAC+AGG | - | chr7_2:74262876-74262895 | None:intergenic | 50.0% | |
| AAACTCAGAAAGCTCGGGAC+CGG | - | chr7_2:74263800-74263819 | None:intergenic | 50.0% | |
| ! | GCGTCCAGCTTGTTCAATAC+CGG | + | chr7_2:74263913-74263932 | Msa1075840:CDS | 50.0% |
| ! | CGTCCAGCTTGTTCAATACC+GGG | + | chr7_2:74263914-74263933 | Msa1075840:CDS | 50.0% |
| GTCAGCATCAGCAAGAATGC+AGG | + | chr7_2:74263994-74264013 | Msa1075840:CDS | 50.0% | |
| CAGCAAGAATGCAGGGAAGT+TGG | + | chr7_2:74264002-74264021 | Msa1075840:CDS | 50.0% | |
| GGGTAGGTATGAGAGGCCAT+CGG | - | chr7_2:74259727-74259746 | None:intergenic | 55.0% | |
| TAAGACAAGGCCTGGAGGGT+AGG | - | chr7_2:74259743-74259762 | None:intergenic | 55.0% | |
| TTTCGGGGGAAAGTTTGGGG+AGG | + | chr7_2:74259876-74259895 | Msa1075840:intron | 55.0% | |
| GTATTTCGGCGGGTGAGGTA+AGG | + | chr7_2:74261342-74261361 | Msa1075840:intron | 55.0% | |
| GGTGAGGTAAGGGAGGCTAT+AGG | + | chr7_2:74261353-74261372 | Msa1075840:intron | 55.0% | |
| GGTTTGAACCCTGAGCCTCT+TGG | - | chr7_2:74261387-74261406 | None:intergenic | 55.0% | |
| !! | TGATAGCGGATGCCTGCTGT+AGG | + | chr7_2:74261554-74261573 | Msa1075840:intron | 55.0% |
| !! | GATAGCGGATGCCTGCTGTA+GGG | + | chr7_2:74261555-74261574 | Msa1075840:intron | 55.0% |
| GGATGCCTGCTGTAGGGTAA+AGG | + | chr7_2:74261561-74261580 | Msa1075840:intron | 55.0% | |
| GTCTGTGTGCGTGTGTATGC+TGG | - | chr7_2:74262054-74262073 | None:intergenic | 55.0% | |
| GGACCGGATTTCTTCAGGGA+AGG | - | chr7_2:74263784-74263803 | None:intergenic | 55.0% | |
| CTCGGGACCGGATTTCTTCA+GGG | - | chr7_2:74263788-74263807 | None:intergenic | 55.0% | |
| ! | TCTGCAGGTATTGCTGGGAC+AGG | + | chr7_2:74263832-74263851 | Msa1075840:CDS | 55.0% |
| GGTGCAGAGACTGTGTCCGA+TGG | + | chr7_2:74259708-74259727 | Msa1075840:CDS | 60.0% | |
| GCCTCTCATACCTACCCTCC+AGG | + | chr7_2:74259730-74259749 | Msa1075840:CDS | 60.0% | |
| GCCTGGAGGGTAGGTATGAG+AGG | - | chr7_2:74259734-74259753 | None:intergenic | 60.0% | |
| GAGTCGTATTTCGGCGGGTG+AGG | + | chr7_2:74261337-74261356 | Msa1075840:intron | 60.0% | |
| GCTCGGGACCGGATTTCTTC+AGG | - | chr7_2:74263789-74263808 | None:intergenic | 60.0% | |
| TTCGGCGGGTGAGGTAAGGG+AGG | + | chr7_2:74261346-74261365 | Msa1075840:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 74259624 | 74264416 | 74259624 | ID=Msa1075840;Name=Msa1075840 |
| chr7_2 | mRNA | 74259624 | 74264416 | 74259624 | ID=Msa1075840-mRNA-1;Parent=Msa1075840;Name=Msa1075840-mRNA-1;_AED=0.07;_eAED=0.07;_QI=61|1|1|1|0.8|0.66|6|288|417 |
| chr7_2 | exon | 74259624 | 74259658 | 74259624 | ID=Msa1075840-mRNA-1:exon:17385;Parent=Msa1075840-mRNA-1 |
| chr7_2 | exon | 74259680 | 74259786 | 74259680 | ID=Msa1075840-mRNA-1:exon:17386;Parent=Msa1075840-mRNA-1 |
| chr7_2 | exon | 74260136 | 74260316 | 74260136 | ID=Msa1075840-mRNA-1:exon:17387;Parent=Msa1075840-mRNA-1 |
| chr7_2 | exon | 74260735 | 74261152 | 74260735 | ID=Msa1075840-mRNA-1:exon:17388;Parent=Msa1075840-mRNA-1 |
| chr7_2 | exon | 74262466 | 74262546 | 74262466 | ID=Msa1075840-mRNA-1:exon:17389;Parent=Msa1075840-mRNA-1 |
| chr7_2 | exon | 74263636 | 74264416 | 74263636 | ID=Msa1075840-mRNA-1:exon:17390;Parent=Msa1075840-mRNA-1 |
| chr7_2 | five_prime_UTR | 74259624 | 74259658 | 74259624 | ID=Msa1075840-mRNA-1:five_prime_utr;Parent=Msa1075840-mRNA-1 |
| chr7_2 | five_prime_UTR | 74259680 | 74259705 | 74259680 | ID=Msa1075840-mRNA-1:five_prime_utr;Parent=Msa1075840-mRNA-1 |
| chr7_2 | CDS | 74259706 | 74259786 | 74259706 | ID=Msa1075840-mRNA-1:cds;Parent=Msa1075840-mRNA-1 |
| chr7_2 | CDS | 74260136 | 74260316 | 74260136 | ID=Msa1075840-mRNA-1:cds;Parent=Msa1075840-mRNA-1 |
| chr7_2 | CDS | 74260735 | 74261152 | 74260735 | ID=Msa1075840-mRNA-1:cds;Parent=Msa1075840-mRNA-1 |
| chr7_2 | CDS | 74262466 | 74262546 | 74262466 | ID=Msa1075840-mRNA-1:cds;Parent=Msa1075840-mRNA-1 |
| chr7_2 | CDS | 74263636 | 74264128 | 74263636 | ID=Msa1075840-mRNA-1:cds;Parent=Msa1075840-mRNA-1 |
| chr7_2 | three_prime_UTR | 74264129 | 74264416 | 74264129 | ID=Msa1075840-mRNA-1:three_prime_utr;Parent=Msa1075840-mRNA-1 |
| Gene Sequence |
| Protein sequence |
