AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0305910


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0305910 MtrunA17_Chr2g0332621 94.585 277 15 0 1 277 1 277 0.0 536
Msa0305910 MtrunA17_Chr5g0437771 33.871 248 157 5 30 273 35 279 3.83e-37 132
Msa0305910 MtrunA17_Chr3g0114231 34.615 208 120 4 78 273 71 274 8.90e-31 115
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0305910 AT3G15690.2 49.097 277 126 5 1 276 1 263 1.33e-81 246
Msa0305910 AT1G52670.1 46.154 273 143 4 6 276 4 274 3.26e-73 226
Msa0305910 AT3G15690.1 45.669 254 123 5 1 253 1 240 5.97e-65 204
Msa0305910 AT3G15690.3 45.161 248 123 4 7 253 7 242 2.86e-63 199
Msa0305910 AT3G56130.1 34.956 226 126 4 63 272 58 278 5.52e-35 127
Msa0305910 AT3G56130.2 36.458 192 102 3 96 272 16 202 2.50e-33 121
Msa0305910 AT3G56130.3 55.319 94 42 0 179 272 98 191 2.48e-30 113
Msa0305910 AT3G56130.4 31.884 207 120 4 63 253 58 259 1.07e-24 100
Msa0305910 AT3G56130.5 29.319 191 114 4 63 237 58 243 7.02e-17 78.6

Find 88 sgRNAs with CRISPR-Local

Find 395 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCACTAACATCATTAAAAT+TGG 0.116441 2_3:-63996242 None:intergenic
CTCTTTGCAGGTGGAATTCT+TGG 0.142729 2_3:+63996415 Msa0305910:intron
TTTATCCTTATCTTCCCTTT+TGG 0.207575 2_3:-63997670 None:intergenic
GTTGAGCTTTCACAACATTT+TGG 0.245452 2_3:+63993287 Msa0305910:CDS
GCGGGTGTATTTATACTTAC+AGG 0.253090 2_3:-63996694 None:intergenic
ATATTGAAGCTTCTTTATTC+CGG 0.272327 2_3:-63997504 None:intergenic
GAAACTGATCCATTTGGTTT+AGG 0.301102 2_3:-63996724 None:intergenic
TCTGAAGAGATTAAATCTTC+TGG 0.320860 2_3:+63996199 Msa0305910:CDS
TATTGAAGCTTCTTTATTCC+GGG 0.339110 2_3:-63997503 None:intergenic
TTGAGAACAAGTTATATATA+TGG 0.339886 2_3:+63997587 Msa0305910:three_prime_UTR
CAGAAGATCTCGGACGATAA+AGG 0.350185 2_3:+63996931 Msa0305910:CDS
TCTGCTGATTGGTCATTAGA+TGG 0.359586 2_3:-63993389 None:intergenic
GCAATATTGCCGTCATTTCC+CGG 0.364958 2_3:+63997485 Msa0305910:CDS
GATGATAAACAGCTGTTTCA+AGG 0.373445 2_3:+63996164 Msa0305910:intron
AATGATATATATCAGCTTGA+TGG 0.374079 2_3:+63996604 Msa0305910:intron
GTTGGGGACTTGGATTGCTT+TGG 0.378715 2_3:-63992071 None:intergenic
GTGACAGATCCAGTTGGTTA+TGG 0.384983 2_3:+63997449 Msa0305910:intron
CAACTGGTAAGTTGGGGACT+TGG 0.388451 2_3:-63992081 None:intergenic
TCTTTCTAGTCTGACGTGTC+CGG 0.391008 2_3:+63997309 Msa0305910:intron
CTTTCTAGTCTGACGTGTCC+GGG 0.391958 2_3:+63997310 Msa0305910:intron
GTGAGATGAAGCCATTGAAT+TGG 0.400250 2_3:-63992212 None:intergenic
AGAAGATCTCGGACGATAAA+GGG 0.403087 2_3:+63996932 Msa0305910:CDS
AATGTAGAAACTGATCCATT+TGG 0.403959 2_3:-63996730 None:intergenic
AAACGTATCACAGGTAGCTT+AGG 0.415749 2_3:+63993218 Msa0305910:intron
TAATCCCTCTTCCAATTCAA+TGG 0.416402 2_3:+63992201 Msa0305910:exon
TACATTGGATCTCTGCTGAT+TGG 0.416759 2_3:-63993400 None:intergenic
CTGCTGATTGGTCATTAGAT+GGG 0.417953 2_3:-63993388 None:intergenic
TTTAATACACAAACCTCAAC+TGG 0.428231 2_3:-63997187 None:intergenic
TTATGTGAGACGGCATCAAT+TGG 0.434687 2_3:+63996446 Msa0305910:CDS
TTAAGAGTGTTGAATACTGC+AGG 0.442291 2_3:-63997630 None:intergenic
GCACTAACATCATTAAAATT+GGG 0.455388 2_3:-63996241 None:intergenic
AAAGAGAGAATGAAGGTTGA+CGG 0.471060 2_3:-63992112 None:intergenic
AAGTTCTAATCACATGCTAA+TGG 0.474616 2_3:-63992034 None:intergenic
CTTACAGGAGCAGGAATTGA+AGG 0.477237 2_3:-63996679 None:intergenic
GTACTAGAAGTTGGATCAGT+AGG 0.483887 2_3:+63993309 Msa0305910:CDS
TCAACGAGAAAGAATGAGAA+TGG 0.488105 2_3:-63997704 None:intergenic
TTCTTTATTCCGGGAAATGA+CGG 0.488727 2_3:-63997494 None:intergenic
TGGTGGGCAGCTACCAGTTG+AGG 0.498148 2_3:+63997174 Msa0305910:CDS
TTTGGTTTAGGTGCTTCTGC+GGG 0.511687 2_3:-63996712 None:intergenic
GCAGAAGCACCTAAACCAAA+TGG 0.516816 2_3:+63996715 Msa0305910:CDS
AGTGCATCACCATAACCAAC+TGG 0.518295 2_3:-63997458 None:intergenic
CCTTCTTCATTGTCTATCGA+GGG 0.519793 2_3:+63996781 Msa0305910:CDS
GAGAGAGAAAGAGAGAATGA+AGG 0.522626 2_3:-63992119 None:intergenic
AAAGTATTGAACTTGCACTT+TGG 0.522702 2_3:+63993254 Msa0305910:CDS
GTCACTGCAGTACACTAGAT+TGG 0.524258 2_3:+63993334 Msa0305910:CDS
ATAGACAATGAAGAAGGTAC+TGG 0.526221 2_3:-63996775 None:intergenic
TGCTGATTGGTCATTAGATG+GGG 0.529817 2_3:-63993387 None:intergenic
TAGAATCTTGATGACCTCCC+CGG 0.535783 2_3:-63997328 None:intergenic
ACCTTCTTCATTGTCTATCG+AGG 0.541849 2_3:+63996780 Msa0305910:CDS
GTATTTATACTTACAGGAGC+AGG 0.544888 2_3:-63996688 None:intergenic
ATTTGGTTTAGGTGCTTCTG+CGG 0.545135 2_3:-63996713 None:intergenic
TGAAGCCATTGAATTGGAAG+AGG 0.546926 2_3:-63992206 None:intergenic
AGTTTCTACATTGACAACAT+TGG 0.552501 2_3:+63996741 Msa0305910:CDS
AAAGAATGAGAATGGAGGGT+TGG 0.559129 2_3:-63997696 None:intergenic
TGCTCCTCCTTCATGTAATG+AGG 0.560231 2_3:+63996961 Msa0305910:CDS
CCCTCGATAGACAATGAAGA+AGG 0.562111 2_3:-63996781 None:intergenic
TGTTACATTGAACAGCTTGG+TGG 0.563421 2_3:+63997157 Msa0305910:CDS
AACGTATCACAGGTAGCTTA+GGG 0.563493 2_3:+63993219 Msa0305910:intron
ATTTCACCTGCGTGTAGTGA+GGG 0.566652 2_3:+63996627 Msa0305910:CDS
AATTGTACCTCATTACATGA+AGG 0.567951 2_3:-63996968 None:intergenic
CGAGAAAGAATGAGAATGGA+GGG 0.581044 2_3:-63997700 None:intergenic
GTTACATTGAACAGCTTGGT+GGG 0.584700 2_3:+63997158 Msa0305910:CDS
ATCAAGATTCTAAGAGAGGA+TGG 0.587641 2_3:+63997339 Msa0305910:CDS
GAAGCCATTGAATTGGAAGA+GGG 0.588124 2_3:-63992205 None:intergenic
TTGGCATCTTCAGAAGATCT+CGG 0.594306 2_3:+63996921 Msa0305910:CDS
AAAAGCTGCAGATGAAGGGT+TGG 0.594334 2_3:+63996813 Msa0305910:CDS
ATTTGTTACATTGAACAGCT+TGG 0.595450 2_3:+63997154 Msa0305910:CDS
GATTTCACCTGCGTGTAGTG+AGG 0.596484 2_3:+63996626 Msa0305910:CDS
ACGAGAAAGAATGAGAATGG+AGG 0.597759 2_3:-63997701 None:intergenic
GGTGATAATTCATTCTCCAA+CGG 0.599409 2_3:+63996834 Msa0305910:CDS
TTTCTAGTCTGACGTGTCCG+GGG 0.599859 2_3:+63997311 Msa0305910:intron
ACAGCTGTTTCAAGGTCAGA+AGG 0.607336 2_3:+63996172 Msa0305910:intron
GAACAAGTTATATATATGGT+AGG 0.609147 2_3:+63997591 Msa0305910:three_prime_UTR
TATTCAACACTCTTAAACTG+AGG 0.616680 2_3:+63997637 Msa0305910:three_prime_UTR
GGTCATCAAGATTCTAAGAG+AGG 0.618953 2_3:+63997335 Msa0305910:CDS
TAAGAGTGTTGAATACTGCA+GGG 0.627436 2_3:-63997629 None:intergenic
CTAGTCTGACGTGTCCGGGG+AGG 0.637170 2_3:+63997314 Msa0305910:intron
AGAAGGTACTGGTTTCGAGA+TGG 0.639561 2_3:-63996764 None:intergenic
GGTCACTAACTTATGTGAGA+CGG 0.640399 2_3:+63996436 Msa0305910:CDS
GATTAGAACTTTGACGATGG+TGG 0.641199 2_3:+63992046 Msa0305910:five_prime_UTR
TGTACCTCATTACATGAAGG+AGG 0.650394 2_3:-63996965 None:intergenic
ATTAGAACTTTGACGATGGT+GGG 0.650876 2_3:+63992047 Msa0305910:five_prime_UTR
GCTGTTTCAAGGTCAGAAGG+TGG 0.666496 2_3:+63996175 Msa0305910:intron
ACAGGAGCAGGAATTGAAGG+AGG 0.687530 2_3:-63996676 None:intergenic
TGTGATTAGAACTTTGACGA+TGG 0.688296 2_3:+63992043 Msa0305910:five_prime_UTR
TCAAATCCCTCACTACACGC+AGG 0.704009 2_3:-63996633 None:intergenic
GTGTTTGTGACAGATCCAGT+TGG 0.712286 2_3:+63997443 Msa0305910:intron
AAGATTCTAAGAGAGGATGG+CGG 0.764705 2_3:+63997342 Msa0305910:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATAAAGTGAAAAAATTT+AGG + chr2_3:63992943-63992962 Msa0305910:intron 10.0%
!!! TATTATTATTTTTGGGTAAT+TGG + chr2_3:63992411-63992430 Msa0305910:intron 15.0%
!! TTGTATAAAAAACAAAAAAC+AGG - chr2_3:63992676-63992695 None:intergenic 15.0%
!!! TTTTTTGTTTTTTATACAAG+AGG + chr2_3:63992677-63992696 Msa0305910:intron 15.0%
!! TGTTTATTTCATTACATAAT+GGG + chr2_3:63993001-63993020 Msa0305910:intron 15.0%
!! ATATTATATGAGTACATATT+CGG + chr2_3:63993681-63993700 Msa0305910:intron 15.0%
!! TCTAAAAAATAAAAATTGAC+CGG + chr2_3:63994320-63994339 Msa0305910:intron 15.0%
!!! AACATAAGCTTTATAAATAA+TGG - chr2_3:63994453-63994472 None:intergenic 15.0%
!! TTATTTATAAAGCTTATGTT+AGG + chr2_3:63994453-63994472 Msa0305910:intron 15.0%
!!! TTGTTTTCAATTAAATTTTC+CGG - chr2_3:63995515-63995534 None:intergenic 15.0%
!! TTTAAACAGATAAAAAATAG+AGG - chr2_3:63997379-63997398 None:intergenic 15.0%
!! GAGGTTAAAAAAAATATACT+AGG - chr2_3:63992279-63992298 None:intergenic 20.0%
!!! AAAACATTGATATTGTTTTG+AGG - chr2_3:63992298-63992317 None:intergenic 20.0%
!! TAAAGTATATTCTCACAAAA+AGG + chr2_3:63992559-63992578 Msa0305910:intron 20.0%
!! AAAGTATATTCTCACAAAAA+GGG + chr2_3:63992560-63992579 Msa0305910:intron 20.0%
!! TGAAAAGAAATTCAAATGAT+TGG + chr2_3:63992737-63992756 Msa0305910:intron 20.0%
!! GTGTTTATTTCATTACATAA+TGG + chr2_3:63993000-63993019 Msa0305910:intron 20.0%
!!! TTAGAATGGTTTTTATTGTT+TGG + chr2_3:63993165-63993184 Msa0305910:intron 20.0%
!! AAAGAATAAAGAACTTACAT+TGG - chr2_3:63993418-63993437 None:intergenic 20.0%
!!! ATTTTTTTTTTGTCCTACTT+CGG + chr2_3:63993545-63993564 Msa0305910:intron 20.0%
!! TATTATATGAGTACATATTC+GGG + chr2_3:63993682-63993701 Msa0305910:intron 20.0%
!!! CAATTACCATATTTTCATTT+TGG - chr2_3:63993844-63993863 None:intergenic 20.0%
!! TGAAAATATGGTAATTGTTT+AGG + chr2_3:63993847-63993866 Msa0305910:intron 20.0%
!! AGTAATATACTCATATACAT+TGG + chr2_3:63993903-63993922 Msa0305910:intron 20.0%
!!! AATAGACTTAACATTCATTT+TGG + chr2_3:63994012-63994031 Msa0305910:intron 20.0%
!! ATTGATATTAACTTTCTTCA+GGG - chr2_3:63994040-63994059 None:intergenic 20.0%
!! AATTGATATTAACTTTCTTC+AGG - chr2_3:63994041-63994060 None:intergenic 20.0%
!!! ATTGTTGTAACATTTTTAGA+AGG - chr2_3:63994099-63994118 None:intergenic 20.0%
!!! ATTCATGTAATTTTCTACAA+TGG - chr2_3:63994163-63994182 None:intergenic 20.0%
!! TTGTGATCAATAAAAATTCA+GGG - chr2_3:63994500-63994519 None:intergenic 20.0%
!! ACAAGTAAAAAAATTAACGA+AGG + chr2_3:63994516-63994535 Msa0305910:intron 20.0%
!! ATAGAGATTAATGTGTATTT+AGG - chr2_3:63994745-63994764 None:intergenic 20.0%
!! GATAAAAAATAAGAAAGAGT+AGG + chr2_3:63995557-63995576 Msa0305910:intron 20.0%
!!! GTACAGATTTGTATTATTTT+GGG - chr2_3:63995641-63995660 None:intergenic 20.0%
!!! CAAAGAGATTTAAGTTATAT+AGG - chr2_3:63996402-63996421 None:intergenic 20.0%
!!! TTTTAGAGTAGATTATTGAA+AGG - chr2_3:63996891-63996910 None:intergenic 20.0%
!! GTAATAGTAACTATAGTAAA+TGG - chr2_3:63997255-63997274 None:intergenic 20.0%
!! TACTATAGTTACTATTACAA+TGG + chr2_3:63997257-63997276 Msa0305910:intron 20.0%
!!! AACATAATGACATTTTTATG+TGG + chr2_3:63997397-63997416 Msa0305910:intron 20.0%
!! TTGAGAACAAGTTATATATA+TGG + chr2_3:63997587-63997606 Msa0305910:three_prime_UTR 20.0%
!! TATTTTACAACTGGTAAGTT+GGG - chr2_3:63992091-63992110 None:intergenic 25.0%
!!! TTATTTTACAACTGGTAAGT+TGG - chr2_3:63992092-63992111 None:intergenic 25.0%
! TAGGAATTGTAAAGAAAAGA+AGG - chr2_3:63992260-63992279 None:intergenic 25.0%
! AAAGAAATTCAAATGATTGG+TGG + chr2_3:63992740-63992759 Msa0305910:intron 25.0%
!! AAGCTAGTTTATATAAGCTT+GGG + chr2_3:63992910-63992929 Msa0305910:intron 25.0%
! TTTGTTCTTAGAACTTAGAA+TGG + chr2_3:63993151-63993170 Msa0305910:intron 25.0%
!!! ACAAATAACCATCATTTTTG+GGG - chr2_3:63993192-63993211 None:intergenic 25.0%
!!! CACAAATAACCATCATTTTT+GGG - chr2_3:63993193-63993212 None:intergenic 25.0%
!! ACACAAATAACCATCATTTT+TGG - chr2_3:63993194-63993213 None:intergenic 25.0%
! GTAATTGAGTAATAGAACAA+TGG - chr2_3:63993481-63993500 None:intergenic 25.0%
!!! GATGGTAGAAATTTTTCAAT+AGG - chr2_3:63993510-63993529 None:intergenic 25.0%
! TATAGTGTAAGATATACTTC+TGG - chr2_3:63993657-63993676 None:intergenic 25.0%
! ATTATATGAGTACATATTCG+GGG + chr2_3:63993683-63993702 Msa0305910:intron 25.0%
! TGCTATGTTAGTATTATTGA+CGG - chr2_3:63993709-63993728 None:intergenic 25.0%
! ATGGTAATTGTTTAGGAATT+TGG + chr2_3:63993854-63993873 Msa0305910:intron 25.0%
!! TTTTACGCAAGAAAATACAT+TGG + chr2_3:63993935-63993954 Msa0305910:intron 25.0%
!! TGTTTAAAATAATGATCTCC+AGG + chr2_3:63993982-63994001 Msa0305910:intron 25.0%
!! TTAAGTCTATTCTTTTTACC+TGG - chr2_3:63994003-63994022 None:intergenic 25.0%
! ATATCAACTTTCAATGATTG+AGG - chr2_3:63994128-63994147 None:intergenic 25.0%
!! ATGTAATTTTCTACAATGGA+GGG - chr2_3:63994159-63994178 None:intergenic 25.0%
!!! AAGTCATTTTTCATGATTGA+GGG + chr2_3:63994223-63994242 Msa0305910:intron 25.0%
! TAGTAATGTAAATTACACTC+CGG - chr2_3:63994342-63994361 None:intergenic 25.0%
! TGTGATCAATAAAAATTCAG+GGG - chr2_3:63994499-63994518 None:intergenic 25.0%
! CTTGTGATCAATAAAAATTC+AGG - chr2_3:63994501-63994520 None:intergenic 25.0%
!!! TGTATTTAGGTTTTTACTGT+TGG - chr2_3:63994704-63994723 None:intergenic 25.0%
! TAAACGGTATTTGTGTATTT+AGG - chr2_3:63994717-63994736 None:intergenic 25.0%
!! GTGTATTTAGGTCTTTTAAA+CGG - chr2_3:63994733-63994752 None:intergenic 25.0%
! AAAGGTTTATTATAGGAAGA+AGG - chr2_3:63994780-63994799 None:intergenic 25.0%
! TATGAACATGAACAGATATT+TGG + chr2_3:63994915-63994934 Msa0305910:intron 25.0%
!!! GACAAAATCCTTTTTAGAAA+AGG + chr2_3:63995100-63995119 Msa0305910:intron 25.0%
!! GGTACAGATTTGTATTATTT+TGG - chr2_3:63995642-63995661 None:intergenic 25.0%
! AATTATCATGTATAGATAGG+AGG - chr2_3:63995688-63995707 None:intergenic 25.0%
! TCGAATTATCATGTATAGAT+AGG - chr2_3:63995691-63995710 None:intergenic 25.0%
!!! GCTAGGGAATTTTTAATTAA+CGG - chr2_3:63995722-63995741 None:intergenic 25.0%
!!! GTTTTGAAAATCAAACAATG+TGG - chr2_3:63995885-63995904 None:intergenic 25.0%
!!! AACTCTGTTAGTTTTTATCA+AGG + chr2_3:63995902-63995921 Msa0305910:intron 25.0%
! AATTTAACAGTTTCAGTTCT+CGG - chr2_3:63996053-63996072 None:intergenic 25.0%
! TAAAGCAATTGAAATTTGTG+TGG + chr2_3:63996079-63996098 Msa0305910:intron 25.0%
! GATATGTATATATCATAGTC+TGG + chr2_3:63996118-63996137 Msa0305910:intron 25.0%
! AGCTGTTTATCATCAAAAAA+AGG - chr2_3:63996158-63996177 None:intergenic 25.0%
! GCACTAACATCATTAAAATT+GGG - chr2_3:63996244-63996263 None:intergenic 25.0%
! TGCACTAACATCATTAAAAT+TGG - chr2_3:63996245-63996264 None:intergenic 25.0%
!!! TTTGTTTTATTGATGCTGAA+TGG - chr2_3:63996316-63996335 None:intergenic 25.0%
! TATAACTTAAATCTCTTTGC+AGG + chr2_3:63996403-63996422 Msa0305910:intron 25.0%
! TAGAGTACGTGAAAAATATT+GGG - chr2_3:63996530-63996549 None:intergenic 25.0%
! ATAGAGTACGTGAAAAATAT+TGG - chr2_3:63996531-63996550 None:intergenic 25.0%
! ATATATATCATTTGGAGGTT+GGG - chr2_3:63996596-63996615 None:intergenic 25.0%
! TCAAGCTGATATATATCATT+TGG - chr2_3:63996604-63996623 None:intergenic 25.0%
! AATGATATATATCAGCTTGA+TGG + chr2_3:63996604-63996623 Msa0305910:intron 25.0%
! ATATTGAAGCTTCTTTATTC+CGG - chr2_3:63997507-63997526 None:intergenic 25.0%
! GAACAAGTTATATATATGGT+AGG + chr2_3:63997591-63997610 Msa0305910:three_prime_UTR 25.0%
! AAGTTCTAATCACATGCTAA+TGG - chr2_3:63992037-63992056 None:intergenic 30.0%
! ATTTTACAACTGGTAAGTTG+GGG - chr2_3:63992090-63992109 None:intergenic 30.0%
AAAGAAGGAGAAGTAGAAAA+AGG - chr2_3:63992245-63992264 None:intergenic 30.0%
!!! TTATACAAGAGGCTGTTTTT+AGG + chr2_3:63992688-63992707 Msa0305910:intron 30.0%
! TTTCTTTTCATGTGACTGAA+AGG - chr2_3:63992727-63992746 None:intergenic 30.0%
TTTGGAGACTGCATAATTAA+GGG + chr2_3:63992812-63992831 Msa0305910:intron 30.0%
! TTTTACAACCAAACAAAACG+AGG + chr2_3:63992865-63992884 Msa0305910:intron 30.0%
TTTACAACCAAACAAAACGA+GGG + chr2_3:63992866-63992885 Msa0305910:intron 30.0%
! CAAGCTAGTTTATATAAGCT+TGG + chr2_3:63992909-63992928 Msa0305910:intron 30.0%
GCAACCTTTGTAACATTTAT+AGG + chr2_3:63993043-63993062 Msa0305910:intron 30.0%
GTTGCCTATAAATGTTACAA+AGG - chr2_3:63993050-63993069 None:intergenic 30.0%
GTATGTATTGTTCATGCAAA+TGG + chr2_3:63993115-63993134 Msa0305910:intron 30.0%
!! AAAGTATTGAACTTGCACTT+TGG + chr2_3:63993254-63993273 Msa0305910:CDS 30.0%
!! AACATTTTGGTACTAGAAGT+TGG + chr2_3:63993300-63993319 Msa0305910:CDS 30.0%
AATGCATGTGAAATCATTGA+TGG - chr2_3:63993528-63993547 None:intergenic 30.0%
!! ATATTTTCATTTTGGCACGA+GGG - chr2_3:63993836-63993855 None:intergenic 30.0%
!! ACATTTTTAGAAGGCCAAAT+TGG - chr2_3:63994090-63994109 None:intergenic 30.0%
! CATGTAATTTTCTACAATGG+AGG - chr2_3:63994160-63994179 None:intergenic 30.0%
!!! GAAGTCATTTTTCATGATTG+AGG + chr2_3:63994222-63994241 Msa0305910:intron 30.0%
ATTGATGTCACCTATATCTT+TGG + chr2_3:63994276-63994295 Msa0305910:intron 30.0%
TTATTGTCCTCCAAAGATAT+AGG - chr2_3:63994289-63994308 None:intergenic 30.0%
! TATCTTTGGAGGACAATAAT+AGG + chr2_3:63994290-63994309 Msa0305910:intron 30.0%
TGAAAATTGCTTAGCTAAAC+TGG - chr2_3:63994570-63994589 None:intergenic 30.0%
!! CCTTTTATAAAGAGAAGCAT+GGG - chr2_3:63994614-63994633 None:intergenic 30.0%
! ACCTTTTATAAAGAGAAGCA+TGG - chr2_3:63994615-63994634 None:intergenic 30.0%
TGCTTCTCTTTATAAAAGGT+TGG + chr2_3:63994615-63994634 Msa0305910:intron 30.0%
!! GGTTGTTATTTCTGTTTAGT+TGG - chr2_3:63994670-63994689 None:intergenic 30.0%
!! AGGCTCTAAAGGTTTATTAT+AGG - chr2_3:63994787-63994806 None:intergenic 30.0%
! TTTAAAATCAAACTGCTCAG+AGG - chr2_3:63994963-63994982 None:intergenic 30.0%
! AACACTAACCTACAAGTTTT+GGG - chr2_3:63995151-63995170 None:intergenic 30.0%
ACAGATATGATCAGAACAAT+TGG - chr2_3:63995220-63995239 None:intergenic 30.0%
AATTGTTCTGATCATATCTG+TGG + chr2_3:63995219-63995238 Msa0305910:intron 30.0%
AGAAAACCAAGATCCAAATT+GGG - chr2_3:63995254-63995273 None:intergenic 30.0%
AAGAAAACCAAGATCCAAAT+TGG - chr2_3:63995255-63995274 None:intergenic 30.0%
TCAAACCAATTGTTAGAAAC+CGG + chr2_3:63995493-63995512 Msa0305910:intron 30.0%
! ATTTTCCGGTTTCTAACAAT+TGG - chr2_3:63995501-63995520 None:intergenic 30.0%
!! TATTTTGGGTGAATAGACAA+TGG - chr2_3:63995627-63995646 None:intergenic 30.0%
AATGAGTTAGAGAAAGGATA+TGG - chr2_3:63995663-63995682 None:intergenic 30.0%
GTTAGTTAGGATATAGGATA+AGG - chr2_3:63995753-63995772 None:intergenic 30.0%
TAAGGAGTTAGTTAGGATAT+AGG - chr2_3:63995759-63995778 None:intergenic 30.0%
! AGTTTTTATCAAGGTTCTGT+TGG + chr2_3:63995911-63995930 Msa0305910:intron 30.0%
!! TCTGTTGGTTTATGTCAATA+TGG + chr2_3:63995926-63995945 Msa0305910:intron 30.0%
!! CTGTTGGTTTATGTCAATAT+GGG + chr2_3:63995927-63995946 Msa0305910:intron 30.0%
TCTGAAGAGATTAAATCTTC+TGG + chr2_3:63996199-63996218 Msa0305910:CDS 30.0%
CAATGAAGAAGAAACAACAA+AGG - chr2_3:63996566-63996585 None:intergenic 30.0%
GATATATATCATTTGGAGGT+TGG - chr2_3:63996597-63996616 None:intergenic 30.0%
AGCTGATATATATCATTTGG+AGG - chr2_3:63996601-63996620 None:intergenic 30.0%
AATGTAGAAACTGATCCATT+TGG - chr2_3:63996733-63996752 None:intergenic 30.0%
AGTTTCTACATTGACAACAT+TGG + chr2_3:63996741-63996760 Msa0305910:CDS 30.0%
AATTGTACCTCATTACATGA+AGG - chr2_3:63996971-63996990 None:intergenic 30.0%
ATGTAATGAGGTACAATTGA+AGG + chr2_3:63996973-63996992 Msa0305910:intron 30.0%
! ATTTGTTACATTGAACAGCT+TGG + chr2_3:63997154-63997173 Msa0305910:CDS 30.0%
TTTAATACACAAACCTCAAC+TGG - chr2_3:63997190-63997209 None:intergenic 30.0%
CAGACTAGAAAGAAATTTGA+AGG - chr2_3:63997302-63997321 None:intergenic 30.0%
TATTGAAGCTTCTTTATTCC+GGG - chr2_3:63997506-63997525 None:intergenic 30.0%
TATTCAACACTCTTAAACTG+AGG + chr2_3:63997637-63997656 Msa0305910:three_prime_UTR 30.0%
!!! TGAGGTTATTTTTTCCCAAA+AGG + chr2_3:63997655-63997674 Msa0305910:three_prime_UTR 30.0%
!!! GAGGTTATTTTTTCCCAAAA+GGG + chr2_3:63997656-63997675 Msa0305910:three_prime_UTR 30.0%
! TTATCCTTATCTTCCCTTTT+GGG - chr2_3:63997672-63997691 None:intergenic 30.0%
! TTTATCCTTATCTTCCCTTT+TGG - chr2_3:63997673-63997692 None:intergenic 30.0%
TGTGATTAGAACTTTGACGA+TGG + chr2_3:63992043-63992062 Msa0305910:five_prime_UTR 35.0%
ATTAGAACTTTGACGATGGT+GGG + chr2_3:63992047-63992066 Msa0305910:five_prime_UTR 35.0%
!! GTTGACGGTTATTTTACAAC+TGG - chr2_3:63992100-63992119 None:intergenic 35.0%
AAAGAGAGAATGAAGGTTGA+CGG - chr2_3:63992115-63992134 None:intergenic 35.0%
TAATCCCTCTTCCAATTCAA+TGG + chr2_3:63992201-63992220 Msa0305910:exon 35.0%
GTTTGGAGACTGCATAATTA+AGG + chr2_3:63992811-63992830 Msa0305910:intron 35.0%
GGTTTATCGTGTAAATGCTT+AGG + chr2_3:63992833-63992852 Msa0305910:intron 35.0%
TAAACACTTGTGTAAGTGCT+TGG - chr2_3:63992987-63993006 None:intergenic 35.0%
ACAAAATGACTCTCAACGAT+AGG - chr2_3:63993084-63993103 None:intergenic 35.0%
! TGTGTCATTAAACGTATCAC+AGG + chr2_3:63993209-63993228 Msa0305910:intron 35.0%
! GTTGAGCTTTCACAACATTT+TGG + chr2_3:63993287-63993306 Msa0305910:CDS 35.0%
!!! TTTTTTTGTCCTACTTCGGA+CGG + chr2_3:63993549-63993568 Msa0305910:intron 35.0%
TGTTGATGTCATACTGTATG+TGG + chr2_3:63993601-63993620 Msa0305910:intron 35.0%
AGTGTATAGTGTAAACACTC+AGG + chr2_3:63993629-63993648 Msa0305910:intron 35.0%
CATTACATTAGCTAGCAAGA+GGG - chr2_3:63993760-63993779 None:intergenic 35.0%
CTCTTGCTAGCTAATGTAAT+GGG + chr2_3:63993759-63993778 Msa0305910:intron 35.0%
AACAAAACAGGCAACAAACA+AGG - chr2_3:63993807-63993826 None:intergenic 35.0%
!! TATTTTCATTTTGGCACGAG+GGG - chr2_3:63993835-63993854 None:intergenic 35.0%
!! CATATTTTCATTTTGGCACG+AGG - chr2_3:63993837-63993856 None:intergenic 35.0%
CTCGTGCCAAAATGAAAATA+TGG + chr2_3:63993835-63993854 Msa0305910:intron 35.0%
TAAACCTGGACTTTCTTTGA+AGG + chr2_3:63994248-63994267 Msa0305910:intron 35.0%
AAAGCTTATGTTAGGATCTC+TGG + chr2_3:63994461-63994480 Msa0305910:intron 35.0%
CCCATGCTTCTCTTTATAAA+AGG + chr2_3:63994611-63994630 Msa0305910:intron 35.0%
! TTACTGTTGGATCTTTTTGC+AGG - chr2_3:63994691-63994710 None:intergenic 35.0%
GAAAATCAGTAAGTGTTTGC+TGG + chr2_3:63994829-63994848 Msa0305910:intron 35.0%
CCACAAGAACACATTTATCA+AGG - chr2_3:63995076-63995095 None:intergenic 35.0%
CCTTGATAAATGTGTTCTTG+TGG + chr2_3:63995073-63995092 Msa0305910:intron 35.0%
!! AGGCACAACCTTTTCTAAAA+AGG - chr2_3:63995111-63995130 None:intergenic 35.0%
! CAACACTAACCTACAAGTTT+TGG - chr2_3:63995152-63995171 None:intergenic 35.0%
ATGATCAGAACAATTGGAGA+GGG - chr2_3:63995214-63995233 None:intergenic 35.0%
TATGATCAGAACAATTGGAG+AGG - chr2_3:63995215-63995234 None:intergenic 35.0%
GTGGAAAATGATTCCCAATT+TGG + chr2_3:63995238-63995257 Msa0305910:intron 35.0%
ATGATTCCCAATTTGGATCT+TGG + chr2_3:63995245-63995264 Msa0305910:intron 35.0%
TTACGTCCATAAGTTGCATT+GGG - chr2_3:63995329-63995348 None:intergenic 35.0%
ATTACGTCCATAAGTTGCAT+TGG - chr2_3:63995330-63995349 None:intergenic 35.0%
GAGGATAATGAGTTAGAGAA+AGG - chr2_3:63995669-63995688 None:intergenic 35.0%
AGTTAGGATATAGGATAAGG+AGG - chr2_3:63995750-63995769 None:intergenic 35.0%
CATAGGATAAGGAGTTAGTT+AGG - chr2_3:63995766-63995785 None:intergenic 35.0%
ATCTGTTAGGACATAGGATA+AGG - chr2_3:63995777-63995796 None:intergenic 35.0%
CTATGTCCTAACAGATTCAT+GGG + chr2_3:63995781-63995800 Msa0305910:intron 35.0%
TATGTCCTAACAGATTCATG+GGG + chr2_3:63995782-63995801 Msa0305910:intron 35.0%
GAAAATCAAACAATGTGGAC+TGG - chr2_3:63995880-63995899 None:intergenic 35.0%
TGTCAATATGGGATTCTATG+AGG + chr2_3:63995938-63995957 Msa0305910:intron 35.0%
CTCATATGTTCATGCATTCA+TGG + chr2_3:63995967-63995986 Msa0305910:intron 35.0%
! GATGATAAACAGCTGTTTCA+AGG + chr2_3:63996164-63996183 Msa0305910:intron 35.0%
AACTTAAATCTCTTTGCAGG+TGG + chr2_3:63996406-63996425 Msa0305910:intron 35.0%
GTATTTATACTTACAGGAGC+AGG - chr2_3:63996691-63996710 None:intergenic 35.0%
! GAAACTGATCCATTTGGTTT+AGG - chr2_3:63996727-63996746 None:intergenic 35.0%
! ATAGACAATGAAGAAGGTAC+TGG - chr2_3:63996778-63996797 None:intergenic 35.0%
TAGAAAAAGCTGCAGATGAA+GGG + chr2_3:63996809-63996828 Msa0305910:CDS 35.0%
GGTGATAATTCATTCTCCAA+CGG + chr2_3:63996834-63996853 Msa0305910:CDS 35.0%
!!! TTGTTTTAGAGTCTTACCGT+TGG - chr2_3:63996853-63996872 None:intergenic 35.0%
GATTTCTCAACATACACATG+AGG - chr2_3:63997063-63997082 None:intergenic 35.0%
TTGACAGATGCAAAAAGTTG+AGG + chr2_3:63997120-63997139 Msa0305910:intron 35.0%
! ATCAAGATTCTAAGAGAGGA+TGG + chr2_3:63997339-63997358 Msa0305910:CDS 35.0%
TTCTTTATTCCGGGAAATGA+CGG - chr2_3:63997497-63997516 None:intergenic 35.0%
!! TAAGAGTGTTGAATACTGCA+GGG - chr2_3:63997632-63997651 None:intergenic 35.0%
!! TTAAGAGTGTTGAATACTGC+AGG - chr2_3:63997633-63997652 None:intergenic 35.0%
! TTTTCCCAAAAGGGAAGATA+AGG + chr2_3:63997665-63997684 Msa0305910:three_prime_UTR 35.0%
GATTAGAACTTTGACGATGG+TGG + chr2_3:63992046-63992065 Msa0305910:five_prime_UTR 40.0%
GAGAGAGAAAGAGAGAATGA+AGG - chr2_3:63992122-63992141 None:intergenic 40.0%
GAAGCCATTGAATTGGAAGA+GGG - chr2_3:63992208-63992227 None:intergenic 40.0%
TGAAGCCATTGAATTGGAAG+AGG - chr2_3:63992209-63992228 None:intergenic 40.0%
GTGAGATGAAGCCATTGAAT+TGG - chr2_3:63992215-63992234 None:intergenic 40.0%
GCATCAACACTTCTGATTGA+TGG - chr2_3:63992524-63992543 None:intergenic 40.0%
AATCTCCAAACACAAACCCT+AGG + chr2_3:63992773-63992792 Msa0305910:intron 40.0%
ATCTCCAAACACAAACCCTA+GGG + chr2_3:63992774-63992793 Msa0305910:intron 40.0%
ACAAACCCTAGGGATCATTA+AGG + chr2_3:63992784-63992803 Msa0305910:intron 40.0%
AACCAAACAAAACGAGGGAA+AGG + chr2_3:63992871-63992890 Msa0305910:intron 40.0%
!! AACCTTTCCCTCGTTTTGTT+TGG - chr2_3:63992876-63992895 None:intergenic 40.0%
TGTTTGGACCCCAAAAATGA+TGG + chr2_3:63993181-63993200 Msa0305910:intron 40.0%
AAACGTATCACAGGTAGCTT+AGG + chr2_3:63993218-63993237 Msa0305910:intron 40.0%
AACGTATCACAGGTAGCTTA+GGG + chr2_3:63993219-63993238 Msa0305910:intron 40.0%
GTACTAGAAGTTGGATCAGT+AGG + chr2_3:63993309-63993328 Msa0305910:CDS 40.0%
! TGCTGATTGGTCATTAGATG+GGG - chr2_3:63993390-63993409 None:intergenic 40.0%
! CTGCTGATTGGTCATTAGAT+GGG - chr2_3:63993391-63993410 None:intergenic 40.0%
! TCTGCTGATTGGTCATTAGA+TGG - chr2_3:63993392-63993411 None:intergenic 40.0%
TACATTGGATCTCTGCTGAT+TGG - chr2_3:63993403-63993422 None:intergenic 40.0%
! GGACGGAAATGATGTGTTTT+AGG + chr2_3:63993566-63993585 Msa0305910:intron 40.0%
CCATTACATTAGCTAGCAAG+AGG - chr2_3:63993761-63993780 None:intergenic 40.0%
CCTCTTGCTAGCTAATGTAA+TGG + chr2_3:63993758-63993777 Msa0305910:intron 40.0%
!! ATTTTCATTTTGGCACGAGG+GGG - chr2_3:63993834-63993853 None:intergenic 40.0%
AATCCCTCAATCACAGAAAG+CGG + chr2_3:63994062-63994081 Msa0305910:intron 40.0%
TCCCACTTGTGATTCGTAAA+CGG + chr2_3:63994187-63994206 Msa0305910:intron 40.0%
TCCGTTTACGAATCACAAGT+GGG - chr2_3:63994191-63994210 None:intergenic 40.0%
TTCCGTTTACGAATCACAAG+TGG - chr2_3:63994192-63994211 None:intergenic 40.0%
TTGTCCTTCAAAGAAAGTCC+AGG - chr2_3:63994255-63994274 None:intergenic 40.0%
GATGTCACCTATATCTTTGG+AGG + chr2_3:63994279-63994298 Msa0305910:intron 40.0%
TGAATCTCTTCCTAGAGAGA+AGG - chr2_3:63994807-63994826 None:intergenic 40.0%
! CTCGACAATTGGTTCATCTT+CGG + chr2_3:63994882-63994901 Msa0305910:intron 40.0%
CACCAAGAATCTTTGTTCTC+GGG - chr2_3:63995046-63995065 None:intergenic 40.0%
CCACCAAGAATCTTTGTTCT+CGG - chr2_3:63995047-63995066 None:intergenic 40.0%
GCTAAGGCTGAAAAGTTCTT+TGG - chr2_3:63995367-63995386 None:intergenic 40.0%
!! TAACAATTGGTTTGACCTGC+TGG - chr2_3:63995488-63995507 None:intergenic 40.0%
GTAGAATAGCAGATCCTTAG+AGG - chr2_3:63995597-63995616 None:intergenic 40.0%
CCATGAATCTGTTAGGACAT+AGG - chr2_3:63995783-63995802 None:intergenic 40.0%
CCTATGTCCTAACAGATTCA+TGG + chr2_3:63995780-63995799 Msa0305910:intron 40.0%
ATGTCCTAACAGATTCATGG+GGG + chr2_3:63995783-63995802 Msa0305910:intron 40.0%
TGCAAACTAGTGTATGCAGT+TGG - chr2_3:63995818-63995837 None:intergenic 40.0%
GGTCACTAACTTATGTGAGA+CGG + chr2_3:63996436-63996455 Msa0305910:CDS 40.0%
TTATGTGAGACGGCATCAAT+TGG + chr2_3:63996446-63996465 Msa0305910:CDS 40.0%
GCGGGTGTATTTATACTTAC+AGG - chr2_3:63996697-63996716 None:intergenic 40.0%
! ATTTGGTTTAGGTGCTTCTG+CGG - chr2_3:63996716-63996735 None:intergenic 40.0%
ACCTTCTTCATTGTCTATCG+AGG + chr2_3:63996780-63996799 Msa0305910:CDS 40.0%
CCTTCTTCATTGTCTATCGA+GGG + chr2_3:63996781-63996800 Msa0305910:CDS 40.0%
!! CTTCATCTGCAGCTTTTTCT+AGG - chr2_3:63996810-63996829 None:intergenic 40.0%
CTAGAAAAAGCTGCAGATGA+AGG + chr2_3:63996808-63996827 Msa0305910:CDS 40.0%
!! ATCTACTCTAAAACCAGAGC+AGG + chr2_3:63996898-63996917 Msa0305910:intron 40.0%
TTGGCATCTTCAGAAGATCT+CGG + chr2_3:63996921-63996940 Msa0305910:CDS 40.0%
AGAAGATCTCGGACGATAAA+GGG + chr2_3:63996932-63996951 Msa0305910:CDS 40.0%
TGTACCTCATTACATGAAGG+AGG - chr2_3:63996968-63996987 None:intergenic 40.0%
!! GGCCTTTCCTTCTCATTTTT+CGG + chr2_3:63996994-63997013 Msa0305910:intron 40.0%
!! GCCTTTCCTTCTCATTTTTC+GGG + chr2_3:63996995-63997014 Msa0305910:intron 40.0%
!!! TTTCCTTCTCATTTTTCGGG+CGG + chr2_3:63996998-63997017 Msa0305910:intron 40.0%
CAGATGCAAAAAGTTGAGGA+CGG + chr2_3:63997124-63997143 Msa0305910:intron 40.0%
AGATGCAAAAAGTTGAGGAC+GGG + chr2_3:63997125-63997144 Msa0305910:intron 40.0%
TGTTACATTGAACAGCTTGG+TGG + chr2_3:63997157-63997176 Msa0305910:CDS 40.0%
GTTACATTGAACAGCTTGGT+GGG + chr2_3:63997158-63997177 Msa0305910:CDS 40.0%
GATGAGAATCTGAAAGAGCT+AGG - chr2_3:63997220-63997239 None:intergenic 40.0%
! GGTCATCAAGATTCTAAGAG+AGG + chr2_3:63997335-63997354 Msa0305910:CDS 40.0%
! AAGATTCTAAGAGAGGATGG+CGG + chr2_3:63997342-63997361 Msa0305910:CDS 40.0%
AAAGAATGAGAATGGAGGGT+TGG - chr2_3:63997699-63997718 None:intergenic 40.0%
! GCGGGAGCTTTTTAATGCAT+CGG - chr2_3:63992597-63992616 None:intergenic 45.0%
AAAATAGTGAGACCCCTTCC+CGG - chr2_3:63992631-63992650 None:intergenic 45.0%
TGATCCCTAGGGTTTGTGTT+TGG - chr2_3:63992781-63992800 None:intergenic 45.0%
AACCCTAGGGATCATTAAGG+AGG + chr2_3:63992787-63992806 Msa0305910:intron 45.0%
CACCTCCTTAATGATCCCTA+GGG - chr2_3:63992792-63992811 None:intergenic 45.0%
ACACCTCCTTAATGATCCCT+AGG - chr2_3:63992793-63992812 None:intergenic 45.0%
!! GGGATCATTAAGGAGGTGTT+TGG + chr2_3:63992794-63992813 Msa0305910:intron 45.0%
GTCACTGCAGTACACTAGAT+TGG + chr2_3:63993334-63993353 Msa0305910:CDS 45.0%
ACATCATTTCCGTCCGAAGT+AGG - chr2_3:63993561-63993580 None:intergenic 45.0%
!! TAAGGCCAGGGGTTGATAAT+TGG - chr2_3:63993734-63993753 None:intergenic 45.0%
TAGCTAGCAAGAGGGATGTA+AGG - chr2_3:63993752-63993771 None:intergenic 45.0%
! TAATGGGCACAACCCTTCTA+AGG + chr2_3:63993775-63993794 Msa0305910:intron 45.0%
ACAAGGCTAGGTCCTTAGAA+GGG - chr2_3:63993790-63993809 None:intergenic 45.0%
AACAAGGCTAGGTCCTTAGA+AGG - chr2_3:63993791-63993810 None:intergenic 45.0%
AACAGGCAACAAACAAGGCT+AGG - chr2_3:63993802-63993821 None:intergenic 45.0%
CATGATTGAGGGACTAAACC+TGG + chr2_3:63994234-63994253 Msa0305910:intron 45.0%
AGCACTGTCTTCTTTCACAC+TGG + chr2_3:63994539-63994558 Msa0305910:intron 45.0%
!! ACCTTTAGAGCCTTCTCTCT+AGG + chr2_3:63994794-63994813 Msa0305910:intron 45.0%
! TCCTAGAGAGAAGGCTCTAA+AGG - chr2_3:63994798-63994817 None:intergenic 45.0%
ATCGAGGTTGTTATCGAGGT+CGG - chr2_3:63994862-63994881 None:intergenic 45.0%
ACAACCTCGATCTCGACAAT+TGG + chr2_3:63994871-63994890 Msa0305910:intron 45.0%
TGAACCAATTGTCGAGATCG+AGG - chr2_3:63994878-63994897 None:intergenic 45.0%
! ATGAGACTAGTCCAAGGGTT+TGG - chr2_3:63995008-63995027 None:intergenic 45.0%
TGTTCTCGGGCAAGAAAGTT+GGG - chr2_3:63995033-63995052 None:intergenic 45.0%
TTGTTCTCGGGCAAGAAAGT+TGG - chr2_3:63995034-63995053 None:intergenic 45.0%
TGCCCGAGAACAAAGATTCT+TGG + chr2_3:63995041-63995060 Msa0305910:intron 45.0%
CCGAGAACAAAGATTCTTGG+TGG + chr2_3:63995044-63995063 Msa0305910:intron 45.0%
TTTGGGTGAGTCGAACAAGT+TGG - chr2_3:63995134-63995153 None:intergenic 45.0%
TCGACTCACCCAAAACTTGT+AGG + chr2_3:63995140-63995159 Msa0305910:intron 45.0%
TTGTTACAGGGGATCGACAA+TGG - chr2_3:63995182-63995201 None:intergenic 45.0%
TGAACGCCCAATGCAACTTA+TGG + chr2_3:63995320-63995339 Msa0305910:intron 45.0%
CCTTAGCAATCCAACCAACA+GGG + chr2_3:63995380-63995399 Msa0305910:intron 45.0%
GGAGGACATGTGAGCTAAAA+GGG - chr2_3:63995434-63995453 None:intergenic 45.0%
AGAGATCTCTCTCTCCTCTA+AGG + chr2_3:63995580-63995599 Msa0305910:intron 45.0%
! ACAGCTGTTTCAAGGTCAGA+AGG + chr2_3:63996172-63996191 Msa0305910:intron 45.0%
CTCTTTGCAGGTGGAATTCT+TGG + chr2_3:63996415-63996434 Msa0305910:intron 45.0%
ATTTCACCTGCGTGTAGTGA+GGG + chr2_3:63996627-63996646 Msa0305910:CDS 45.0%
CTTACAGGAGCAGGAATTGA+AGG - chr2_3:63996682-63996701 None:intergenic 45.0%
! TTTGGTTTAGGTGCTTCTGC+GGG - chr2_3:63996715-63996734 None:intergenic 45.0%
!! GCAGAAGCACCTAAACCAAA+TGG + chr2_3:63996715-63996734 Msa0305910:CDS 45.0%
!! AGAAGGTACTGGTTTCGAGA+TGG - chr2_3:63996767-63996786 None:intergenic 45.0%
CCCTCGATAGACAATGAAGA+AGG - chr2_3:63996784-63996803 None:intergenic 45.0%
AAAAGCTGCAGATGAAGGGT+TGG + chr2_3:63996813-63996832 Msa0305910:CDS 45.0%
!! ACTCTAAAACCAGAGCAGGT+TGG + chr2_3:63996902-63996921 Msa0305910:intron 45.0%
CAGAAGATCTCGGACGATAA+AGG + chr2_3:63996931-63996950 Msa0305910:CDS 45.0%
TGCTCCTCCTTCATGTAATG+AGG + chr2_3:63996961-63996980 Msa0305910:CDS 45.0%
GCCCGAAAAATGAGAAGGAA+AGG - chr2_3:63996999-63997018 None:intergenic 45.0%
! TCTTTCTAGTCTGACGTGTC+CGG + chr2_3:63997309-63997328 Msa0305910:intron 45.0%
! TAGAATCTTGATGACCTCCC+CGG - chr2_3:63997331-63997350 None:intergenic 45.0%
GTGTTTGTGACAGATCCAGT+TGG + chr2_3:63997443-63997462 Msa0305910:intron 45.0%
GTGACAGATCCAGTTGGTTA+TGG + chr2_3:63997449-63997468 Msa0305910:intron 45.0%
AGTGCATCACCATAACCAAC+TGG - chr2_3:63997461-63997480 None:intergenic 45.0%
GCAATATTGCCGTCATTTCC+CGG + chr2_3:63997485-63997504 Msa0305910:CDS 45.0%
!!! TTGTTTTATATTATTATTTT+TGG + chr2_3:63992403-63992422 Msa0305910:intron 5.0%
!!! TGTTTTATATTATTATTTTT+GGG + chr2_3:63992404-63992423 Msa0305910:intron 5.0%
GTTGGGGACTTGGATTGCTT+TGG - chr2_3:63992074-63992093 None:intergenic 50.0%
! CAACTGGTAAGTTGGGGACT+TGG - chr2_3:63992084-63992103 None:intergenic 50.0%
TAAAAAGCTCCCGCATACGC+AGG + chr2_3:63992603-63992622 Msa0305910:intron 50.0%
! GGGAAGGGGTCTCACTATTT+TGG + chr2_3:63992630-63992649 Msa0305910:intron 50.0%
GCATGCCAATTATCAACCCC+TGG + chr2_3:63993726-63993745 Msa0305910:intron 50.0%
CGAGGGGGAAGAAACAAAAC+AGG - chr2_3:63993819-63993838 None:intergenic 50.0%
!! GTGCCGCTTTCTGTGATTGA+GGG - chr2_3:63994068-63994087 None:intergenic 50.0%
CACAGAAAGCGGCACCAATT+TGG + chr2_3:63994073-63994092 Msa0305910:intron 50.0%
CGAGATCGAGGTTGTTATCG+AGG - chr2_3:63994866-63994885 None:intergenic 50.0%
CTGCTCAGAGGAGACAATCA+TGG - chr2_3:63994951-63994970 None:intergenic 50.0%
!! CCAAGGGTTTGGTGTCAACA+AGG - chr2_3:63994997-63995016 None:intergenic 50.0%
CCTTGTTGACACCAAACCCT+TGG + chr2_3:63994994-63995013 Msa0305910:intron 50.0%
! GGGTGATGAGACTAGTCCAA+GGG - chr2_3:63995013-63995032 None:intergenic 50.0%
! TGGGTGATGAGACTAGTCCA+AGG - chr2_3:63995014-63995033 None:intergenic 50.0%
TACAGGGGATCGACAATGGA+GGG - chr2_3:63995178-63995197 None:intergenic 50.0%
TTACAGGGGATCGACAATGG+AGG - chr2_3:63995179-63995198 None:intergenic 50.0%
GGAAGCAGTGGTTGTTACAG+GGG - chr2_3:63995193-63995212 None:intergenic 50.0%
GGGAAGCAGTGGTTGTTACA+GGG - chr2_3:63995194-63995213 None:intergenic 50.0%
AGGGAAGCAGTGGTTGTTAC+AGG - chr2_3:63995195-63995214 None:intergenic 50.0%
ACAATTGGAGAGGGAAGCAG+TGG - chr2_3:63995205-63995224 None:intergenic 50.0%
GCCTTAGCAATCCAACCAAC+AGG + chr2_3:63995379-63995398 Msa0305910:intron 50.0%
! CCCTGTTGGTTGGATTGCTA+AGG - chr2_3:63995383-63995402 None:intergenic 50.0%
TAGCGCTGCCAGTACTTAAC+GGG - chr2_3:63995411-63995430 None:intergenic 50.0%
GTAGCGCTGCCAGTACTTAA+CGG - chr2_3:63995412-63995431 None:intergenic 50.0%
GGGAGGACATGTGAGCTAAA+AGG - chr2_3:63995435-63995454 None:intergenic 50.0%
TTTGACCTGCTGGATCTTCG+AGG - chr2_3:63995478-63995497 None:intergenic 50.0%
GGATAAGGAGGAGCTAGCTA+GGG - chr2_3:63995738-63995757 None:intergenic 50.0%
AGGATAAGGAGGAGCTAGCT+AGG - chr2_3:63995739-63995758 None:intergenic 50.0%
GAAGCCCCCATGAATCTGTT+AGG - chr2_3:63995790-63995809 None:intergenic 50.0%
! GCTGTTTCAAGGTCAGAAGG+TGG + chr2_3:63996175-63996194 Msa0305910:intron 50.0%
TCATTTGGAGGTTGGGCAGA+TGG - chr2_3:63996589-63996608 None:intergenic 50.0%
GATTTCACCTGCGTGTAGTG+AGG + chr2_3:63996626-63996645 Msa0305910:CDS 50.0%
TCAAATCCCTCACTACACGC+AGG - chr2_3:63996636-63996655 None:intergenic 50.0%
ACAGGAGCAGGAATTGAAGG+AGG - chr2_3:63996679-63996698 None:intergenic 50.0%
TGACCGCCCGAAAAATGAGA+AGG - chr2_3:63997004-63997023 None:intergenic 50.0%
! CTTTCTAGTCTGACGTGTCC+GGG + chr2_3:63997310-63997329 Msa0305910:intron 50.0%
! TTTCTAGTCTGACGTGTCCG+GGG + chr2_3:63997311-63997330 Msa0305910:intron 50.0%
! AAGAGAGGATGGCGGTTAGT+TGG + chr2_3:63997350-63997369 Msa0305910:intron 50.0%
GCGTGTCTAGTGACCAACAC+GGG - chr2_3:63992502-63992521 None:intergenic 55.0%
GGCGTGTCTAGTGACCAACA+CGG - chr2_3:63992503-63992522 None:intergenic 55.0%
CAAGAGGGATGTAAGGCCAG+GGG - chr2_3:63993745-63993764 None:intergenic 55.0%
GCAAGAGGGATGTAAGGCCA+GGG - chr2_3:63993746-63993765 None:intergenic 55.0%
AGCAAGAGGGATGTAAGGCC+AGG - chr2_3:63993747-63993766 None:intergenic 55.0%
!! GGTGCCGCTTTCTGTGATTG+AGG - chr2_3:63994069-63994088 None:intergenic 55.0%
! GGGTGAGTCGAACAAGTTGG+AGG - chr2_3:63995131-63995150 None:intergenic 55.0%
GCATTGGGCGTTCATGAGCA+CGG - chr2_3:63995314-63995333 None:intergenic 55.0%
CTGCCAGTACTTAACGGGAC+AGG - chr2_3:63995406-63995425 None:intergenic 55.0%
AGAGTCAGCAATGCCGGAGT+GGG - chr2_3:63995455-63995474 None:intergenic 55.0%
TCGAGGAGAGTCAGCAATGC+CGG - chr2_3:63995461-63995480 None:intergenic 55.0%
ACTCTCCTCGAAGATCCAGC+AGG + chr2_3:63995470-63995489 Msa0305910:intron 55.0%
CTGAAGATGCCAACCTGCTC+TGG - chr2_3:63996914-63996933 None:intergenic 55.0%
! CGTGTCGATGTCACCCGTGT+TGG + chr2_3:63992486-63992505 Msa0305910:intron 60.0%
TTCCCGGAACCTGCGTATGC+GGG - chr2_3:63992615-63992634 None:intergenic 60.0%
CTTCCCGGAACCTGCGTATG+CGG - chr2_3:63992616-63992635 None:intergenic 60.0%
GCATACGCAGGTTCCGGGAA+GGG + chr2_3:63992615-63992634 Msa0305910:intron 60.0%
CATACGCAGGTTCCGGGAAG+GGG + chr2_3:63992616-63992635 Msa0305910:intron 60.0%
CTTAACGGGACAGGCCCTGT+TGG - chr2_3:63995397-63995416 None:intergenic 60.0%
GGGCCTGTCCCGTTAAGTAC+TGG + chr2_3:63995400-63995419 Msa0305910:intron 60.0%
GCTCACATGTCCTCCCACTC+CGG + chr2_3:63995439-63995458 Msa0305910:intron 60.0%
GAGAGTCAGCAATGCCGGAG+TGG - chr2_3:63995456-63995475 None:intergenic 60.0%
! TGGTGGGCAGCTACCAGTTG+AGG + chr2_3:63997174-63997193 Msa0305910:CDS 60.0%
GCTCCCGCATACGCAGGTTC+CGG + chr2_3:63992609-63992628 Msa0305910:intron 65.0%
CTCCCGCATACGCAGGTTCC+GGG + chr2_3:63992610-63992629 Msa0305910:intron 65.0%
CGCATACGCAGGTTCCGGGA+AGG + chr2_3:63992614-63992633 Msa0305910:intron 65.0%
ACGGGACAGGCCCTGTTGGT+TGG - chr2_3:63995393-63995412 None:intergenic 65.0%
GTCAGCAATGCCGGAGTGGG+AGG - chr2_3:63995452-63995471 None:intergenic 65.0%
CTAGTCTGACGTGTCCGGGG+AGG + chr2_3:63997314-63997333 Msa0305910:intron 65.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 63992033 63997719 63992033 ID=Msa0305910;Name=Msa0305910
chr2_3 mRNA 63992033 63997719 63992033 ID=Msa0305910-mRNA-1;Parent=Msa0305910;Name=Msa0305910-mRNA-1;_AED=0.12;_eAED=0.12;_QI=187|1|1|1|0.75|0.88|9|190|277
chr2_3 exon 63992033 63992235 63992033 ID=Msa0305910-mRNA-1:exon:21414;Parent=Msa0305910-mRNA-1
chr2_3 exon 63993231 63993419 63993231 ID=Msa0305910-mRNA-1:exon:21415;Parent=Msa0305910-mRNA-1
chr2_3 exon 63996176 63996255 63996176 ID=Msa0305910-mRNA-1:exon:21416;Parent=Msa0305910-mRNA-1
chr2_3 exon 63996425 63996484 63996425 ID=Msa0305910-mRNA-1:exon:21417;Parent=Msa0305910-mRNA-1
chr2_3 exon 63996619 63996855 63996619 ID=Msa0305910-mRNA-1:exon:21418;Parent=Msa0305910-mRNA-1
chr2_3 exon 63996920 63996982 63996920 ID=Msa0305910-mRNA-1:exon:21419;Parent=Msa0305910-mRNA-1
chr2_3 exon 63997127 63997195 63997127 ID=Msa0305910-mRNA-1:exon:21420;Parent=Msa0305910-mRNA-1
chr2_3 exon 63997318 63997363 63997318 ID=Msa0305910-mRNA-1:exon:21421;Parent=Msa0305910-mRNA-1
chr2_3 exon 63997456 63997719 63997456 ID=Msa0305910-mRNA-1:exon:21422;Parent=Msa0305910-mRNA-1
chr2_3 five_prime_UTR 63992033 63992219 63992033 ID=Msa0305910-mRNA-1:five_prime_utr;Parent=Msa0305910-mRNA-1
chr2_3 CDS 63992220 63992235 63992220 ID=Msa0305910-mRNA-1:cds;Parent=Msa0305910-mRNA-1
chr2_3 CDS 63993231 63993419 63993231 ID=Msa0305910-mRNA-1:cds;Parent=Msa0305910-mRNA-1
chr2_3 CDS 63996176 63996255 63996176 ID=Msa0305910-mRNA-1:cds;Parent=Msa0305910-mRNA-1
chr2_3 CDS 63996425 63996484 63996425 ID=Msa0305910-mRNA-1:cds;Parent=Msa0305910-mRNA-1
chr2_3 CDS 63996619 63996855 63996619 ID=Msa0305910-mRNA-1:cds;Parent=Msa0305910-mRNA-1
chr2_3 CDS 63996920 63996982 63996920 ID=Msa0305910-mRNA-1:cds;Parent=Msa0305910-mRNA-1
chr2_3 CDS 63997127 63997195 63997127 ID=Msa0305910-mRNA-1:cds;Parent=Msa0305910-mRNA-1
chr2_3 CDS 63997318 63997363 63997318 ID=Msa0305910-mRNA-1:cds;Parent=Msa0305910-mRNA-1
chr2_3 CDS 63997456 63997529 63997456 ID=Msa0305910-mRNA-1:cds;Parent=Msa0305910-mRNA-1
chr2_3 three_prime_UTR 63997530 63997719 63997530 ID=Msa0305910-mRNA-1:three_prime_utr;Parent=Msa0305910-mRNA-1
Gene Sequence

>Msa0305910

ATGGCTTCATCTCACTGTAGCTTAGGGACACAAAATGTCAAAGTATTGAACTTGCACTTTGGTCAAGAAAGAGTTGAGCTTTCACAACATTTTGGTACTAGAAGTTGGATCAGTAGGAAGTCACTGCAGTACACTAGATTGGTTGCGTCAAGACAGACAGTTAGATCTTTAACCCCATCTAATGACCAATCAGCAGAGATCCAATCTGTTTCAAGGTCAGAAGGTGGTTCTGAAGAGATTAAATCTTCTGGTTTGACAAGTGAACTGTTTCCCAATTTTAATGATGTGGAATTCTTGGTCACTAACTTATGTGAGACGGCATCAATTGGAGAGCTAGAATTAAAACTTGATGGATTTCACCTGCGTGTAGTGAGGGATTTGACTGAAAAATCTAAAACACTTCCTCCTTCAATTCCTGCTCCTGTAAGTATAAATACACCCGCAGAAGCACCTAAACCAAATGGATCAGTTTCTACATTGACAACATTGGCCATCTCGAAACCAGTACCTTCTTCATTGTCTATCGAGGGATTCCTAGAAAAAGCTGCAGATGAAGGGTTGGTGATAATTCATTCTCCAACGGTTGGCATCTTCAGAAGATCTCGGACGATAAAGGGAAAACGTGCTCCTCCTTCATGTAATGAGATGCAAAAAGTTGAGGACGGGAAAGTGATTTGTTACATTGAACAGCTTGGTGGGCAGCTACCAGTTGAGTCTGACGTGTCCGGGGAGGTCATCAAGATTCTAAGAGAGGATGGCGATCCAGTTGGTTATGGTGATGCACTTATAGCAATATTGCCGTCATTTCCCGGAATAAAGAAGCTTCAATATTGA

Protein sequence

>Msa0305910

MASSHCSLGTQNVKVLNLHFGQERVELSQHFGTRSWISRKSLQYTRLVASRQTVRSLTPSNDQSAEIQSVSRSEGGSEEIKSSGLTSELFPNFNDVEFLVTNLCETASIGELELKLDGFHLRVVRDLTEKSKTLPPSIPAPVSINTPAEAPKPNGSVSTLTTLAISKPVPSSLSIEGFLEKAADEGLVIIHSPTVGIFRRSRTIKGKRAPPSCNEMQKVEDGKVICYIEQLGGQLPVESDVSGEVIKILREDGDPVGYGDALIAILPSFPGIKKLQY*