Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0195030 | XP_013462674.1 | 96.403 | 139 | 5 | 0 | 1 | 139 | 1 | 139 | 1.19e-91 | 271 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0195030 | sp|P93092|ACP1_CASGL | 66.187 | 139 | 43 | 2 | 1 | 139 | 1 | 135 | 7.07e-55 | 171 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0195030 | B7FHC3 | 96.403 | 139 | 5 | 0 | 1 | 139 | 1 | 139 | 5.68e-92 | 271 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001760 | Msa0195030 | 0.833443 | 5.317338e-56 | -8.615850e-47 |
| Msa0003330 | Msa0195030 | 0.829959 | 3.843267e-55 | -8.615850e-47 |
| Msa0007810 | Msa0195030 | -0.814901 | 1.216404e-51 | -8.615850e-47 |
| Msa0011060 | Msa0195030 | -0.834178 | 3.482066e-56 | -8.615850e-47 |
| Msa0011100 | Msa0195030 | -0.834266 | 3.310779e-56 | -8.615850e-47 |
| Msa0014970 | Msa0195030 | -0.807748 | 4.343371e-50 | -8.615850e-47 |
| Msa0021290 | Msa0195030 | 0.827529 | 1.487992e-54 | -8.615850e-47 |
| Msa0021320 | Msa0195030 | 0.828155 | 1.052185e-54 | -8.615850e-47 |
| Msa0025060 | Msa0195030 | -0.811796 | 5.851657e-51 | -8.615850e-47 |
| Msa0025690 | Msa0195030 | -0.825835 | 3.774730e-54 | -8.615850e-47 |
| Msa0027590 | Msa0195030 | 0.835530 | 1.590448e-56 | -8.615850e-47 |
| Msa0027610 | Msa0195030 | -0.837504 | 4.998246e-57 | -8.615850e-47 |
| Msa0029730 | Msa0195030 | 0.847932 | 8.456324e-60 | -8.615850e-47 |
| Msa0036560 | Msa0195030 | -0.809274 | 2.051687e-50 | -8.615850e-47 |
| Msa0037230 | Msa0195030 | 0.860809 | 1.594689e-63 | -8.615850e-47 |
| Msa0042510 | Msa0195030 | 0.811117 | 8.219890e-51 | -8.615850e-47 |
| Msa0044010 | Msa0195030 | 0.854059 | 1.583477e-61 | -8.615850e-47 |
| Msa0048410 | Msa0195030 | -0.824227 | 9.046654e-54 | -8.615850e-47 |
| Msa0050320 | Msa0195030 | -0.856668 | 2.752950e-62 | -8.615850e-47 |
| Msa0055030 | Msa0195030 | 0.803934 | 2.750291e-49 | -8.615850e-47 |
| Msa0056230 | Msa0195030 | -0.806173 | 9.352851e-50 | -8.615850e-47 |
| Msa0060080 | Msa0195030 | -0.809150 | 2.181533e-50 | -8.615850e-47 |
| Msa0066680 | Msa0195030 | -0.802061 | 6.706886e-49 | -8.615850e-47 |
| Msa0071640 | Msa0195030 | 0.835342 | 1.774002e-56 | -8.615850e-47 |
| Msa0072570 | Msa0195030 | 0.856322 | 3.478486e-62 | -8.615850e-47 |
| Msa0075350 | Msa0195030 | 0.803387 | 3.571103e-49 | -8.615850e-47 |
| Msa0075370 | Msa0195030 | -0.826935 | 2.064068e-54 | -8.615850e-47 |
| Msa0077320 | Msa0195030 | 0.828870 | 7.068634e-55 | -8.615850e-47 |
| Msa0081700 | Msa0195030 | -0.819230 | 1.295044e-52 | -8.615850e-47 |
| Msa0089540 | Msa0195030 | 0.860980 | 1.414614e-63 | -8.615850e-47 |
| Msa0090350 | Msa0195030 | -0.808192 | 3.494169e-50 | -8.615850e-47 |
| Msa0094210 | Msa0195030 | 0.812285 | 4.577421e-51 | -8.615850e-47 |
| Msa0099090 | Msa0195030 | -0.860082 | 2.646581e-63 | -8.615850e-47 |
| Msa0099350 | Msa0195030 | -0.824618 | 7.320827e-54 | -8.615850e-47 |
| Msa0099430 | Msa0195030 | -0.824190 | 9.231742e-54 | -8.615850e-47 |
| Msa0121460 | Msa0195030 | -0.803444 | 3.475830e-49 | -8.615850e-47 |
| Msa0123310 | Msa0195030 | -0.833597 | 4.866508e-56 | -8.615850e-47 |
| Msa0134580 | Msa0195030 | 0.801372 | 9.287312e-49 | -8.615850e-47 |
| Msa0137810 | Msa0195030 | -0.804759 | 1.851478e-49 | -8.615850e-47 |
| Msa0139280 | Msa0195030 | -0.818752 | 1.664047e-52 | -8.615850e-47 |
| Msa0148000 | Msa0195030 | -0.835520 | 1.599808e-56 | -8.615850e-47 |
| Msa0154720 | Msa0195030 | -0.856072 | 4.118668e-62 | -8.615850e-47 |
| Msa0167800 | Msa0195030 | -0.835917 | 1.269396e-56 | -8.615850e-47 |
| Msa0167860 | Msa0195030 | 0.835747 | 1.401808e-56 | -8.615850e-47 |
| Msa0168320 | Msa0195030 | 0.832264 | 1.043728e-55 | -8.615850e-47 |
| Msa0169710 | Msa0195030 | 0.886305 | 3.839291e-72 | -8.615850e-47 |
| Msa0174060 | Msa0195030 | -0.810807 | 9.593260e-51 | -8.615850e-47 |
| Msa0175000 | Msa0195030 | 0.810753 | 9.855585e-51 | -8.615850e-47 |
| Msa0177940 | Msa0195030 | 0.827653 | 1.388892e-54 | -8.615850e-47 |
| Msa0183840 | Msa0195030 | 0.847884 | 8.717143e-60 | -8.615850e-47 |
| Msa0188740 | Msa0195030 | 0.860877 | 1.520625e-63 | -8.615850e-47 |
| Msa0191550 | Msa0195030 | 0.806120 | 9.595770e-50 | -8.615850e-47 |
| Msa0192050 | Msa0195030 | 0.838778 | 2.349040e-57 | -8.615850e-47 |
| Msa0192300 | Msa0195030 | 0.871387 | 7.105910e-67 | -8.615850e-47 |
| Msa0195030 | Msa0197920 | 0.813242 | 2.826792e-51 | -8.615850e-47 |
| Msa0195030 | Msa0214800 | 0.807734 | 4.372687e-50 | -8.615850e-47 |
| Msa0195030 | Msa0225070 | -0.824401 | 8.232819e-54 | -8.615850e-47 |
| Msa0195030 | Msa0225370 | -0.828627 | 8.093206e-55 | -8.615850e-47 |
| Msa0195030 | Msa0237180 | 0.991685 | 5.587969e-189 | -8.615850e-47 |
| Msa0195030 | Msa0239420 | 0.870516 | 1.375195e-66 | -8.615850e-47 |
| Msa0195030 | Msa0258280 | -0.807447 | 5.033255e-50 | -8.615850e-47 |
| Msa0195030 | Msa0266380 | -0.851297 | 9.725401e-61 | -8.615850e-47 |
| Msa0195030 | Msa0270160 | 0.841350 | 5.012140e-58 | -8.615850e-47 |
| Msa0195030 | Msa0274940 | 0.974862 | 6.553219e-139 | -8.615850e-47 |
| Msa0195030 | Msa0277320 | 0.800923 | 1.147771e-48 | -8.615850e-47 |
| Msa0195030 | Msa0281330 | 0.846717 | 1.823070e-59 | -8.615850e-47 |
| Msa0195030 | Msa0281370 | 0.885304 | 9.127593e-72 | -8.615850e-47 |
| Msa0195030 | Msa0290800 | 0.810247 | 1.267587e-50 | -8.615850e-47 |
| Msa0195030 | Msa0301250 | 0.864324 | 1.320052e-64 | -8.615850e-47 |
| Msa0195030 | Msa0304350 | -0.809784 | 1.594864e-50 | -8.615850e-47 |
| Msa0195030 | Msa0305910 | -0.813024 | 3.155565e-51 | -8.615850e-47 |
| Msa0195030 | Msa0307430 | 0.822011 | 2.975697e-53 | -8.615850e-47 |
| Msa0195030 | Msa0313060 | 0.880271 | 6.297796e-70 | -8.615850e-47 |
| Msa0195030 | Msa0315430 | 0.815225 | 1.030927e-51 | -8.615850e-47 |
| Msa0195030 | Msa0315660 | 0.992227 | 4.877629e-192 | -8.615850e-47 |
| Msa0195030 | Msa0317300 | 0.833716 | 4.544259e-56 | -8.615850e-47 |
| Msa0195030 | Msa0328870 | 0.824336 | 8.530017e-54 | -8.615850e-47 |
| Msa0195030 | Msa0340560 | 0.813222 | 2.854826e-51 | -8.615850e-47 |
| Msa0195030 | Msa0340830 | -0.804177 | 2.448129e-49 | -8.615850e-47 |
| Msa0195030 | Msa0341860 | -0.862530 | 4.747203e-64 | -8.615850e-47 |
| Msa0195030 | Msa0362440 | -0.813317 | 2.721631e-51 | -8.615850e-47 |
| Msa0195030 | Msa0370350 | -0.848426 | 6.177659e-60 | -8.615850e-47 |
| Msa0195030 | Msa0371490 | 0.845657 | 3.541607e-59 | -8.615850e-47 |
| Msa0195030 | Msa0373550 | 0.820053 | 8.405928e-53 | -8.615850e-47 |
| Msa0195030 | Msa0376850 | 0.855557 | 5.825730e-62 | -8.615850e-47 |
| Msa0195030 | Msa0377370 | 0.824580 | 7.472372e-54 | -8.615850e-47 |
| Msa0195030 | Msa0377520 | 0.854309 | 1.341633e-61 | -8.615850e-47 |
| Msa0195030 | Msa0378620 | -0.870090 | 1.897933e-66 | -8.615850e-47 |
| Msa0195030 | Msa0380590 | 0.857838 | 1.242815e-62 | -8.615850e-47 |
| Msa0195030 | Msa0382670 | 0.862932 | 3.569421e-64 | -8.615850e-47 |
| Msa0195030 | Msa0385030 | 0.847789 | 9.261726e-60 | -8.615850e-47 |
| Msa0195030 | Msa0388520 | 0.841451 | 4.715169e-58 | -8.615850e-47 |
| Msa0195030 | Msa0389800 | 0.854878 | 9.179425e-62 | -8.615850e-47 |
| Msa0195030 | Msa0412480 | -0.814204 | 1.735729e-51 | -8.615850e-47 |
| Msa0195030 | Msa0416210 | 0.818969 | 1.485452e-52 | -8.615850e-47 |
| Msa0195030 | Msa0416470 | 0.858069 | 1.060678e-62 | -8.615850e-47 |
| Msa0195030 | Msa0417850 | -0.835426 | 1.690247e-56 | -8.615850e-47 |
| Msa0195030 | Msa0425020 | -0.842466 | 2.542202e-58 | -8.615850e-47 |
| Msa0195030 | Msa0426090 | 0.835132 | 2.004694e-56 | -8.615850e-47 |
| Msa0195030 | Msa0426250 | 0.803799 | 2.933431e-49 | -8.615850e-47 |
| Msa0195030 | Msa0426940 | 0.805881 | 1.077490e-49 | -8.615850e-47 |
| Msa0195030 | Msa0430130 | 0.856028 | 4.243644e-62 | -8.615850e-47 |
| Msa0195030 | Msa0432260 | -0.878117 | 3.638748e-69 | -8.615850e-47 |
| Msa0195030 | Msa0436830 | -0.849070 | 4.092515e-60 | -8.615850e-47 |
| Msa0195030 | Msa0450150 | 0.803741 | 3.015819e-49 | -8.615850e-47 |
| Msa0195030 | Msa0452490 | -0.801534 | 8.606867e-49 | -8.615850e-47 |
| Msa0195030 | Msa0467250 | 0.804200 | 2.421613e-49 | -8.615850e-47 |
| Msa0195030 | Msa0468140 | 0.832899 | 7.263733e-56 | -8.615850e-47 |
| Msa0195030 | Msa0468660 | 0.823941 | 1.056366e-53 | -8.615850e-47 |
| Msa0195030 | Msa0472480 | 0.839370 | 1.650169e-57 | -8.615850e-47 |
| Msa0195030 | Msa0476730 | -0.876965 | 9.176103e-69 | -8.615850e-47 |
| Msa0195030 | Msa0479480 | 0.812518 | 4.071947e-51 | -8.615850e-47 |
| Msa0195030 | Msa0480940 | 0.829808 | 4.183359e-55 | -8.615850e-47 |
| Msa0195030 | Msa0482760 | 0.816459 | 5.469495e-52 | -8.615850e-47 |
| Msa0195030 | Msa0483090 | -0.806687 | 7.287670e-50 | -8.615850e-47 |
| Msa0195030 | Msa0485220 | 0.800794 | 1.219236e-48 | -8.615850e-47 |
| Msa0195030 | Msa0486850 | -0.808510 | 2.989371e-50 | -8.615850e-47 |
| Msa0195030 | Msa0500420 | 0.858322 | 8.917887e-63 | -8.615850e-47 |
| Msa0195030 | Msa0511760 | 0.819463 | 1.146165e-52 | -8.615850e-47 |
| Msa0195030 | Msa0516830 | 0.854353 | 1.302856e-61 | -8.615850e-47 |
| Msa0195030 | Msa0517480 | 0.814773 | 1.298838e-51 | -8.615850e-47 |
| Msa0195030 | Msa0521100 | -0.837271 | 5.737033e-57 | -8.615850e-47 |
| Msa0195030 | Msa0521730 | 0.814673 | 1.366456e-51 | -8.615850e-47 |
| Msa0195030 | Msa0526490 | -0.857550 | 1.511884e-62 | -8.615850e-47 |
| Msa0195030 | Msa0526500 | -0.821170 | 4.655909e-53 | -8.615850e-47 |
| Msa0195030 | Msa0527560 | 0.808592 | 2.871989e-50 | -8.615850e-47 |
| Msa0195030 | Msa0533610 | -0.810922 | 9.059505e-51 | -8.615850e-47 |
| Msa0195030 | Msa0538050 | -0.819968 | 8.788086e-53 | -8.615850e-47 |
| Msa0195030 | Msa0540160 | -0.857417 | 1.655863e-62 | -8.615850e-47 |
| Msa0195030 | Msa0545750 | -0.808378 | 3.190246e-50 | -8.615850e-47 |
| Msa0195030 | Msa0547920 | 0.816466 | 5.451769e-52 | -8.615850e-47 |
| Msa0195030 | Msa0549550 | -0.825800 | 3.846082e-54 | -8.615850e-47 |
| Msa0195030 | Msa0555510 | -0.804545 | 2.052118e-49 | -8.615850e-47 |
| Msa0195030 | Msa0559440 | -0.808078 | 3.696187e-50 | -8.615850e-47 |
| Msa0195030 | Msa0569980 | -0.815555 | 8.706327e-52 | -8.615850e-47 |
| Msa0195030 | Msa0571880 | -0.802127 | 6.502087e-49 | -8.615850e-47 |
| Msa0195030 | Msa0573550 | 0.887672 | 1.162012e-72 | -8.615850e-47 |
| Msa0195030 | Msa0574780 | 0.825836 | 3.772132e-54 | -8.615850e-47 |
| Msa0195030 | Msa0577960 | -0.802008 | 6.876942e-49 | -8.615850e-47 |
| Msa0195030 | Msa0582070 | 0.822604 | 2.167159e-53 | -8.615850e-47 |
| Msa0195030 | Msa0597240 | 0.842014 | 3.349205e-58 | -8.615850e-47 |
| Msa0195030 | Msa0602900 | 0.816663 | 4.923136e-52 | -8.615850e-47 |
| Msa0195030 | Msa0604890 | -0.843812 | 1.113251e-58 | -8.615850e-47 |
| Msa0195030 | Msa0605890 | 0.817357 | 3.438423e-52 | -8.615850e-47 |
| Msa0195030 | Msa0608940 | -0.802812 | 4.697338e-49 | -8.615850e-47 |
| Msa0195030 | Msa0609120 | 0.810671 | 1.026563e-50 | -8.615850e-47 |
| Msa0195030 | Msa0617470 | -0.818343 | 2.059195e-52 | -8.615850e-47 |
| Msa0195030 | Msa0619230 | 0.841162 | 5.615369e-58 | -8.615850e-47 |
| Msa0195030 | Msa0619300 | 0.802733 | 4.877896e-49 | -8.615850e-47 |
| Msa0195030 | Msa0621190 | 0.844679 | 6.512209e-59 | -8.615850e-47 |
| Msa0195030 | Msa0622230 | 0.814694 | 1.352486e-51 | -8.615850e-47 |
| Msa0195030 | Msa0625550 | -0.800425 | 1.449890e-48 | -8.615850e-47 |
| Msa0195030 | Msa0632040 | -0.814313 | 1.641638e-51 | -8.615850e-47 |
| Msa0195030 | Msa0635070 | -0.802961 | 4.374894e-49 | -8.615850e-47 |
| Msa0195030 | Msa0643960 | 0.816995 | 4.148772e-52 | -8.615850e-47 |
| Msa0195030 | Msa0646180 | -0.860452 | 2.046159e-63 | -8.615850e-47 |
| Msa0195030 | Msa0649530 | -0.808105 | 3.646314e-50 | -8.615850e-47 |
| Msa0195030 | Msa0654400 | -0.808946 | 2.411771e-50 | -8.615850e-47 |
| Msa0195030 | Msa0658520 | -0.806443 | 8.206370e-50 | -8.615850e-47 |
| Msa0195030 | Msa0659020 | -0.832220 | 1.070275e-55 | -8.615850e-47 |
| Msa0195030 | Msa0662670 | -0.803346 | 3.642606e-49 | -8.615850e-47 |
| Msa0195030 | Msa0681220 | 0.813162 | 2.942240e-51 | -8.615850e-47 |
| Msa0195030 | Msa0686550 | 0.812219 | 4.733575e-51 | -8.615850e-47 |
| Msa0195030 | Msa0691740 | -0.830501 | 2.834309e-55 | -8.615850e-47 |
| Msa0195030 | Msa0691760 | 0.819014 | 1.450907e-52 | -8.615850e-47 |
| Msa0195030 | Msa0699300 | 0.808962 | 2.393433e-50 | -8.615850e-47 |
| Msa0195030 | Msa0700250 | -0.817372 | 3.411592e-52 | -8.615850e-47 |
| Msa0195030 | Msa0702970 | 0.802355 | 5.834751e-49 | -8.615850e-47 |
| Msa0195030 | Msa0703430 | -0.801991 | 6.934568e-49 | -8.615850e-47 |
| Msa0195030 | Msa0704690 | 0.819384 | 1.194915e-52 | -8.615850e-47 |
| Msa0195030 | Msa0708870 | -0.805992 | 1.021197e-49 | -8.615850e-47 |
| Msa0195030 | Msa0722660 | -0.800651 | 1.304303e-48 | -8.615850e-47 |
| Msa0195030 | Msa0733240 | -0.844039 | 9.675849e-59 | -8.615850e-47 |
| Msa0195030 | Msa0748350 | 0.813029 | 3.148115e-51 | -8.615850e-47 |
| Msa0195030 | Msa0755500 | -0.811056 | 8.471659e-51 | -8.615850e-47 |
| Msa0195030 | Msa0758420 | 0.828137 | 1.062528e-54 | -8.615850e-47 |
| Msa0195030 | Msa0767280 | 0.812006 | 5.267495e-51 | -8.615850e-47 |
| Msa0195030 | Msa0774360 | -0.812653 | 3.804109e-51 | -8.615850e-47 |
| Msa0195030 | Msa0779830 | -0.812506 | 4.097099e-51 | -8.615850e-47 |
| Msa0195030 | Msa0788380 | 0.819180 | 1.329882e-52 | -8.615850e-47 |
| Msa0195030 | Msa0790450 | 0.864955 | 8.377974e-65 | -8.615850e-47 |
| Msa0195030 | Msa0812020 | -0.816377 | 5.705186e-52 | -8.615850e-47 |
| Msa0195030 | Msa0818900 | 0.808787 | 2.608646e-50 | -8.615850e-47 |
| Msa0195030 | Msa0834220 | 0.834685 | 2.598151e-56 | -8.615850e-47 |
| Msa0195030 | Msa0834830 | -0.817859 | 2.650627e-52 | -8.615850e-47 |
| Msa0195030 | Msa0838070 | 0.809476 | 1.857281e-50 | -8.615850e-47 |
| Msa0195030 | Msa0846900 | 0.827874 | 1.229417e-54 | -8.615850e-47 |
| Msa0195030 | Msa0852090 | -0.811001 | 8.709132e-51 | -8.615850e-47 |
| Msa0195030 | Msa0852620 | 0.800264 | 1.563717e-48 | -8.615850e-47 |
| Msa0195030 | Msa0870220 | -0.817793 | 2.743063e-52 | -8.615850e-47 |
| Msa0195030 | Msa0880050 | 0.862800 | 3.921036e-64 | -8.615850e-47 |
| Msa0195030 | Msa0881240 | 0.835587 | 1.538799e-56 | -8.615850e-47 |
| Msa0195030 | Msa0903460 | -0.815433 | 9.267991e-52 | -8.615850e-47 |
| Msa0195030 | Msa0906100 | -0.803702 | 3.072449e-49 | -8.615850e-47 |
| Msa0195030 | Msa0924590 | -0.806326 | 8.685619e-50 | -8.615850e-47 |
| Msa0195030 | Msa0929680 | 0.803769 | 2.976671e-49 | -8.615850e-47 |
| Msa0195030 | Msa0929700 | 0.890174 | 1.250248e-73 | -8.615850e-47 |
| Msa0195030 | Msa0930360 | 0.811777 | 5.909128e-51 | -8.615850e-47 |
| Msa0195030 | Msa0930790 | 0.828371 | 9.329600e-55 | -8.615850e-47 |
| Msa0195030 | Msa0934290 | -0.802688 | 4.981152e-49 | -8.615850e-47 |
| Msa0195030 | Msa0935930 | -0.828800 | 7.350507e-55 | -8.615850e-47 |
| Msa0195030 | Msa0967900 | -0.821614 | 3.676885e-53 | -8.615850e-47 |
| Msa0195030 | Msa0972930 | -0.830503 | 2.831857e-55 | -8.615850e-47 |
| Msa0195030 | Msa0982260 | 0.855086 | 7.988661e-62 | -8.615850e-47 |
| Msa0195030 | Msa1001620 | 0.821423 | 4.069744e-53 | -8.615850e-47 |
| Msa0195030 | Msa1014550 | -0.842142 | 3.098084e-58 | -8.615850e-47 |
| Msa0195030 | Msa1018210 | -0.806563 | 7.740132e-50 | -8.615850e-47 |
| Msa0195030 | Msa1019090 | 0.819893 | 9.144860e-53 | -8.615850e-47 |
| Msa0195030 | Msa1025200 | 0.848143 | 7.397178e-60 | -8.615850e-47 |
| Msa0195030 | Msa1025220 | 0.854492 | 1.187423e-61 | -8.615850e-47 |
| Msa0195030 | Msa1026710 | 0.820413 | 6.951038e-53 | -8.615850e-47 |
| Msa0195030 | Msa1041680 | 0.827393 | 1.604081e-54 | -8.615850e-47 |
| Msa0195030 | Msa1041830 | 0.817716 | 2.854105e-52 | -8.615850e-47 |
| Msa0195030 | Msa1047020 | 0.814374 | 1.591903e-51 | -8.615850e-47 |
| Msa0195030 | Msa1054280 | 0.803722 | 3.043176e-49 | -8.615850e-47 |
| Msa0195030 | Msa1055520 | -0.819576 | 1.080124e-52 | -8.615850e-47 |
| Msa0195030 | Msa1075840 | -0.804807 | 1.809351e-49 | -8.615850e-47 |
| Msa0195030 | Msa1078480 | 0.832889 | 7.305734e-56 | -8.615850e-47 |
| Msa0195030 | Msa1078590 | -0.804989 | 1.657127e-49 | -8.615850e-47 |
| Msa0195030 | Msa1078640 | 0.835098 | 2.044679e-56 | -8.615850e-47 |
| Msa0195030 | Msa1082050 | 0.802011 | 6.868748e-49 | -8.615850e-47 |
| Msa0195030 | Msa1082170 | 0.803333 | 3.664551e-49 | -8.615850e-47 |
| Msa0195030 | Msa1093190 | -0.847535 | 1.087569e-59 | -8.615850e-47 |
| Msa0195030 | Msa1102090 | 0.828738 | 7.609069e-55 | -8.615850e-47 |
| Msa0195030 | Msa1104020 | -0.810607 | 1.059877e-50 | -8.615850e-47 |
| Msa0195030 | Msa1116940 | 0.830796 | 2.400024e-55 | -8.615850e-47 |
| Msa0195030 | Msa1124980 | 0.856296 | 3.541175e-62 | -8.615850e-47 |
| Msa0195030 | Msa1126690 | 0.812257 | 4.644551e-51 | -8.615850e-47 |
| Msa0195030 | Msa1128230 | -0.805226 | 1.478461e-49 | -8.615850e-47 |
| Msa0195030 | Msa1131030 | 0.830676 | 2.568001e-55 | -8.615850e-47 |
| Msa0195030 | Msa1134430 | -0.801552 | 8.531027e-49 | -8.615850e-47 |
| Msa0195030 | Msa1136880 | 0.810632 | 1.046709e-50 | -8.615850e-47 |
| Msa0195030 | Msa1136980 | 0.812137 | 4.932284e-51 | -8.615850e-47 |
| Msa0195030 | Msa1147600 | -0.806477 | 8.070022e-50 | -8.615850e-47 |
| Msa0195030 | Msa1152860 | 0.815570 | 8.639129e-52 | -8.615850e-47 |
| Msa0195030 | Msa1156830 | 0.831724 | 1.419284e-55 | -8.615850e-47 |
| Msa0195030 | Msa1163320 | 0.823126 | 1.638445e-53 | -8.615850e-47 |
| Msa0195030 | Msa1165640 | 0.808015 | 3.812053e-50 | -8.615850e-47 |
| Msa0195030 | Msa1166570 | 0.815031 | 1.138411e-51 | -8.615850e-47 |
| Msa0195030 | Msa1167360 | 0.860700 | 1.720072e-63 | -8.615850e-47 |
| Msa0195030 | Msa1169590 | -0.810998 | 8.720081e-51 | -8.615850e-47 |
| Msa0195030 | Msa1169780 | -0.801449 | 8.957132e-49 | -8.615850e-47 |
| Msa0195030 | Msa1186030 | 0.809974 | 1.450951e-50 | -8.615850e-47 |
| Msa0195030 | Msa1206240 | 0.820835 | 5.560802e-53 | -8.615850e-47 |
| Msa0195030 | Msa1207710 | -0.800515 | 1.389888e-48 | -8.615850e-47 |
| Msa0195030 | Msa1207880 | 0.820718 | 5.916528e-53 | -8.615850e-47 |
| Msa0195030 | Msa1213470 | -0.809148 | 2.183262e-50 | -8.615850e-47 |
| Msa0195030 | Msa1218610 | 0.801612 | 8.295617e-49 | -8.615850e-47 |
| Msa0195030 | Msa1220580 | 0.825522 | 4.476649e-54 | -8.615850e-47 |
| Msa0195030 | Msa1225040 | 0.852128 | 5.654565e-61 | -8.615850e-47 |
| Msa0195030 | Msa1235590 | 0.811144 | 8.109737e-51 | -8.615850e-47 |
| Msa0195030 | Msa1235950 | 0.840472 | 8.518222e-58 | -8.615850e-47 |
| Msa0195030 | Msa1235980 | 0.844035 | 9.698449e-59 | -8.615850e-47 |
| Msa0195030 | Msa1237040 | 0.869235 | 3.603700e-66 | -8.615850e-47 |
| Msa0195030 | Msa1253300 | 0.805463 | 1.318852e-49 | -8.615850e-47 |
| Msa0195030 | Msa1258060 | 0.816699 | 4.834330e-52 | -8.615850e-47 |
| Msa0195030 | Msa1258540 | 0.809804 | 1.578492e-50 | -8.615850e-47 |
| Msa0195030 | Msa1261970 | 0.823797 | 1.141490e-53 | -8.615850e-47 |
| Msa0195030 | Msa1272770 | -0.806337 | 8.638817e-50 | -8.615850e-47 |
| Msa0195030 | Msa1284060 | 0.807963 | 3.909736e-50 | -8.615850e-47 |
| Msa0195030 | Msa1295840 | -0.802200 | 6.280940e-49 | -8.615850e-47 |
| Msa0195030 | Msa1300370 | -0.810720 | 1.001762e-50 | -8.615850e-47 |
| Msa0195030 | Msa1307730 | 0.852933 | 3.333830e-61 | -8.615850e-47 |
| Msa0195030 | Msa1316100 | 0.814143 | 1.789902e-51 | -8.615850e-47 |
| Msa0195030 | Msa1317390 | 0.836687 | 8.083990e-57 | -8.615850e-47 |
| Msa0195030 | Msa1320660 | -0.800267 | 1.561873e-48 | -8.615850e-47 |
| Msa0195030 | Msa1327690 | -0.803760 | 2.988705e-49 | -8.615850e-47 |
| Msa0195030 | Msa1332340 | -0.811724 | 6.067055e-51 | -8.615850e-47 |
| Msa0195030 | Msa1334560 | 0.832127 | 1.128619e-55 | -8.615850e-47 |
| Msa0195030 | Msa1347610 | 0.830903 | 2.259594e-55 | -8.615850e-47 |
| Msa0195030 | Msa1349870 | 0.803865 | 2.842971e-49 | -8.615850e-47 |
| Msa0195030 | Msa1351020 | 0.834810 | 2.417089e-56 | -8.615850e-47 |
| Msa0195030 | Msa1359880 | -0.859555 | 3.813332e-63 | -8.615850e-47 |
| Msa0195030 | Msa1363270 | -0.840949 | 6.386762e-58 | -8.615850e-47 |
| Msa0195030 | Msa1363280 | -0.812831 | 3.478417e-51 | -8.615850e-47 |
| Msa0195030 | Msa1363910 | 0.825482 | 4.576141e-54 | -8.615850e-47 |
| Msa0195030 | Msa1364110 | 0.848865 | 4.666746e-60 | -8.615850e-47 |
| Msa0195030 | Msa1369220 | -0.816755 | 4.694913e-52 | -8.615850e-47 |
| Msa0195030 | Msa1379940 | 0.809803 | 1.579900e-50 | -8.615850e-47 |
| Msa0195030 | Msa1384410 | -0.828815 | 7.290322e-55 | -8.615850e-47 |
| Msa0195030 | Msa1387750 | 0.810268 | 1.254340e-50 | -8.615850e-47 |
| Msa0195030 | Msa1389340 | 0.833048 | 6.671234e-56 | -8.615850e-47 |
| Msa0195030 | Msa1390760 | 0.844405 | 7.713988e-59 | -8.615850e-47 |
| Msa0195030 | Msa1392570 | -0.800196 | 1.614345e-48 | -8.615850e-47 |
| Msa0195030 | Msa1395050 | 0.816308 | 5.913977e-52 | -8.615850e-47 |
| Msa0195030 | Msa1395700 | -0.813328 | 2.705614e-51 | -8.615850e-47 |
| Msa0195030 | Msa1398310 | -0.820842 | 5.538592e-53 | -8.615850e-47 |
| Msa0195030 | Msa1403520 | 0.819939 | 8.923194e-53 | -8.615850e-47 |
| Msa0195030 | Msa1407550 | 0.807180 | 5.733800e-50 | -8.615850e-47 |
| Msa0195030 | Msa1408990 | 0.813444 | 2.551553e-51 | -8.615850e-47 |
| Msa0195030 | Msa1423050 | 0.860208 | 2.424624e-63 | -8.615850e-47 |
| Msa0195030 | Msa1425070 | 0.823934 | 1.059964e-53 | -8.615850e-47 |
| Msa0195030 | Msa1426690 | -0.801972 | 6.996840e-49 | -8.615850e-47 |
| Msa0195030 | Msa1430250 | 0.804647 | 1.953736e-49 | -8.615850e-47 |
| Msa0195030 | Msa1432310 | 0.809243 | 2.083827e-50 | -8.615850e-47 |
| Msa0195030 | Msa1433060 | -0.806819 | 6.833615e-50 | -8.615850e-47 |
| Msa0195030 | Msa1446410 | 0.801328 | 9.482365e-49 | -8.615850e-47 |
| Msa0195030 | Msa1446510 | 0.817026 | 4.081754e-52 | -8.615850e-47 |
| Msa0195030 | Msa1448840 | -0.854822 | 9.525563e-62 | -8.615850e-47 |
| Msa0195030 | Msa1449160 | 0.822292 | 2.561286e-53 | -8.615850e-47 |
| Msa0195030 | Msa1450560 | 0.863558 | 2.284983e-64 | -8.615850e-47 |
| Msa0195030 | Msa1450850 | -0.804622 | 1.977767e-49 | -8.615850e-47 |
| Msa0195030 | Msa1465700 | 0.860652 | 1.778533e-63 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0195030 | MtrunA17_Chr2g0286471 | 96.403 | 139 | 5 | 0 | 1 | 139 | 1 | 139 | 1.09e-95 | 271 |
| Msa0195030 | MtrunA17_Chr2g0286481 | 94.245 | 139 | 8 | 0 | 1 | 139 | 1 | 139 | 1.37e-84 | 243 |
| Msa0195030 | MtrunA17_Chr8g0385881 | 46.853 | 143 | 66 | 4 | 1 | 138 | 1 | 138 | 6.85e-37 | 123 |
| Msa0195030 | MtrunA17_Chr1g0191251 | 66.667 | 78 | 21 | 2 | 58 | 133 | 12 | 86 | 3.14e-25 | 92.0 |
| Msa0195030 | MtrunA17_Chr4g0066661 | 80.435 | 46 | 9 | 0 | 94 | 139 | 25 | 70 | 2.72e-18 | 74.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0195030 | AT4G25050.1 | 54.348 | 138 | 56 | 2 | 1 | 138 | 1 | 131 | 3.38e-40 | 131 |
| Msa0195030 | AT1G54630.1 | 51.049 | 143 | 58 | 3 | 1 | 139 | 1 | 135 | 6.24e-37 | 123 |
| Msa0195030 | AT4G25050.2 | 50.000 | 150 | 56 | 3 | 1 | 138 | 1 | 143 | 2.93e-36 | 122 |
| Msa0195030 | AT1G54580.1 | 58.333 | 108 | 37 | 1 | 32 | 139 | 36 | 135 | 5.53e-36 | 120 |
| Msa0195030 | AT5G27200.1 | 64.773 | 88 | 31 | 0 | 51 | 138 | 50 | 137 | 2.28e-34 | 117 |
| Msa0195030 | AT3G05020.1 | 53.571 | 112 | 44 | 2 | 27 | 138 | 33 | 136 | 5.13e-34 | 116 |
| Msa0195030 | AT1G54630.2 | 45.000 | 100 | 49 | 2 | 1 | 99 | 1 | 95 | 1.38e-16 | 70.9 |
Find 63 sgRNAs with CRISPR-Local
Find 159 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAGTTTCCCTTTCAATTA+AGG | 0.142430 | 2_1:-11663965 | Msa0195030:CDS |
| ACAGCAAATACTTGTGATTT+AGG | 0.200469 | 2_1:+11661561 | None:intergenic |
| GAGGCCTTACATGTCTATTT+TGG | 0.213090 | 2_1:-11661731 | Msa0195030:three_prime_UTR |
| ATGGGACTTGAGGAGGAATT+TGG | 0.306245 | 2_1:-11661857 | Msa0195030:CDS |
| CTTGAACGGTGGTGATGCTC+TGG | 0.312374 | 2_1:+11661810 | None:intergenic |
| TCAGATGATTCAACTGTTAC+TGG | 0.317385 | 2_1:-11663116 | Msa0195030:CDS |
| ACACTGAAGAATGTATTTAT+AGG | 0.333834 | 2_1:+11664459 | None:intergenic |
| GTATTATTGTAATTCTAATA+TGG | 0.336412 | 2_1:+11661633 | None:intergenic |
| CTCCCTCTCCAACCAATCTA+TGG | 0.340875 | 2_1:-11664314 | Msa0195030:intron |
| CTCTTTGCTAGTTTAAGCCT+TGG | 0.348527 | 2_1:+11661754 | None:intergenic |
| TCAGTTTCCCTTTCAATTAA+GGG | 0.366831 | 2_1:-11663964 | Msa0195030:CDS |
| CACACCTTCTGCACAGTCTC+TGG | 0.366899 | 2_1:+11663167 | None:intergenic |
| GTTTCTTGTGCTAGGATCTC+TGG | 0.370772 | 2_1:-11663994 | Msa0195030:CDS |
| TAGTACAGTGTTTGTTGGTT+TGG | 0.374925 | 2_1:+11664492 | None:intergenic |
| ACATGAAACCGACGTCCTTT+TGG | 0.380510 | 2_1:+11663913 | None:intergenic |
| TTTGGCTGCAAAGCAATAGA+TGG | 0.381361 | 2_1:+11663931 | None:intergenic |
| AGAGAGAGATCTGAGATCTA+AGG | 0.382203 | 2_1:+11664379 | None:intergenic |
| CATTATAGTACAGTGTTTGT+TGG | 0.411296 | 2_1:+11664487 | None:intergenic |
| TATTGCAGCATACCATAGAT+TGG | 0.430088 | 2_1:+11664302 | None:intergenic |
| ATTGAAAGGGAAACTGAACT+TGG | 0.450513 | 2_1:+11663970 | None:intergenic |
| GTTCCTTCCCTTAATTGAAA+GGG | 0.468703 | 2_1:+11663957 | None:intergenic |
| GAGTCTAAATTTACCGCACT+TGG | 0.469359 | 2_1:-11663092 | Msa0195030:CDS |
| AGTTCCTTCCCTTAATTGAA+AGG | 0.475850 | 2_1:+11663956 | None:intergenic |
| AGACATGGAGGTTGTGGTGA+TGG | 0.479192 | 2_1:+11664342 | None:intergenic |
| AGATCTCTCTCTCTTTCCAA+TGG | 0.488563 | 2_1:-11664368 | Msa0195030:exon |
| TCTATTGCTTTGCAGCCAAA+AGG | 0.491642 | 2_1:-11663928 | Msa0195030:CDS |
| ACTCTGATTCGATACTTTCG+AGG | 0.498922 | 2_1:+11664537 | None:intergenic |
| TGACATAGTCAAGAAACAAT+TGG | 0.515237 | 2_1:-11663144 | Msa0195030:CDS |
| AACTCCAAAATAGACATGTA+AGG | 0.521710 | 2_1:+11661727 | None:intergenic |
| GCAGCATACCATAGATTGGT+TGG | 0.525411 | 2_1:+11664306 | None:intergenic |
| GATGAGAGACATGGAGGTTG+TGG | 0.526450 | 2_1:+11664336 | None:intergenic |
| TTGAACGGTGGTGATGCTCT+GGG | 0.536178 | 2_1:+11661811 | None:intergenic |
| GTGCAGGTTGAGATTGTGAT+GGG | 0.538445 | 2_1:-11661875 | Msa0195030:intron |
| AGTGTTTGTTGGTTTGGTTG+AGG | 0.538737 | 2_1:+11664498 | None:intergenic |
| CGAAAGTATCGAATCAGAGT+TGG | 0.541133 | 2_1:-11664534 | Msa0195030:five_prime_UTR |
| TAACAGTTGAATCATCTGAC+AGG | 0.543284 | 2_1:+11663120 | None:intergenic |
| TAACAAACACTCACACGTGC+CGG | 0.545966 | 2_1:-11664560 | Msa0195030:five_prime_UTR |
| TGTGCAGGTTGAGATTGTGA+TGG | 0.550404 | 2_1:-11661876 | Msa0195030:intron |
| ATCTGAGATCTAAGGAAGGA+CGG | 0.555596 | 2_1:+11664387 | None:intergenic |
| TTTCCCTTTCAATTAAGGGA+AGG | 0.563082 | 2_1:-11663960 | Msa0195030:CDS |
| TGACAAGCTTCTTGAGACCA+AGG | 0.563747 | 2_1:-11661771 | Msa0195030:CDS |
| TACCATAGATTGGTTGGAGA+GGG | 0.564538 | 2_1:+11664312 | None:intergenic |
| GAGGGAGATGAGAGACATGG+AGG | 0.574209 | 2_1:+11664330 | None:intergenic |
| GGAGGAATTTGGCATTAGTG+TGG | 0.577421 | 2_1:-11661846 | Msa0195030:CDS |
| CATGTCAGCAGCTTCTTGAA+CGG | 0.584545 | 2_1:+11661796 | None:intergenic |
| GGAGAGGGAGATGAGAGACA+TGG | 0.587645 | 2_1:+11664327 | None:intergenic |
| GTCAGCAGCTTCTTGAACGG+TGG | 0.593457 | 2_1:+11661799 | None:intergenic |
| TGAGATTGTGATGGGACTTG+AGG | 0.596018 | 2_1:-11661867 | Msa0195030:CDS |
| TAAACCAGAGACTGTGCAGA+AGG | 0.602913 | 2_1:-11663171 | Msa0195030:CDS |
| TGATTCGATACTTTCGAGGC+CGG | 0.603111 | 2_1:+11664541 | None:intergenic |
| GATTGTGATGGGACTTGAGG+AGG | 0.609784 | 2_1:-11661864 | Msa0195030:CDS |
| GGCTTAAACTAGCAAAGAGG+AGG | 0.615054 | 2_1:-11661750 | Msa0195030:exon |
| TTGAAAGGGAAACTGAACTT+GGG | 0.615907 | 2_1:+11663971 | None:intergenic |
| CTTTGCAGCCAAAAGGACGT+CGG | 0.624330 | 2_1:-11663921 | Msa0195030:CDS |
| TGGAGCTGATTCTCTTGACA+CGG | 0.626251 | 2_1:-11663072 | Msa0195030:intron |
| AGAGATCTGAGATCTAAGGA+AGG | 0.633359 | 2_1:+11664383 | None:intergenic |
| ATACCATAGATTGGTTGGAG+AGG | 0.645014 | 2_1:+11664311 | None:intergenic |
| AACAGTTGAATCATCTGACA+GGG | 0.652394 | 2_1:+11663121 | None:intergenic |
| CAAGGCTTAAACTAGCAAAG+AGG | 0.660316 | 2_1:-11661753 | Msa0195030:exon |
| GTTGTGGTGATGGAAGCCAT+TGG | 0.668457 | 2_1:+11664352 | None:intergenic |
| AAGAGAATCAGCTCCAAGTG+CGG | 0.701784 | 2_1:+11663079 | None:intergenic |
| ATGGTCCAGAAAATATCTAG+CGG | 0.709404 | 2_1:+11661652 | None:intergenic |
| TCGGTTTCATGTCACATGCG+CGG | 0.715418 | 2_1:-11663902 | Msa0195030:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATAGTATTTTGTAAAAAA+AGG | + | chr2_1:11663947-11663966 | None:intergenic | 10.0% |
| !! | AAAGATTAAGAAAATGAAAA+GGG | + | chr2_1:11661829-11661848 | None:intergenic | 15.0% |
| !! | AAAAGATTAAGAAAATGAAA+AGG | + | chr2_1:11661830-11661849 | None:intergenic | 15.0% |
| !! | AGAACTAAAACAAAATTATT+GGG | - | chr2_1:11662829-11662848 | Msa0195030:intron | 15.0% |
| !! | TTATATAGATTACATGAAAA+TGG | - | chr2_1:11663856-11663875 | Msa0195030:intron | 15.0% |
| !! | TTGAAATGTAAGTAAATAAT+CGG | + | chr2_1:11664203-11664222 | None:intergenic | 15.0% |
| !! | GTATTATTGTAATTCTAATA+TGG | + | chr2_1:11664473-11664492 | None:intergenic | 15.0% |
| !! | AAGATTAAGAAAATGAAAAG+GGG | + | chr2_1:11661828-11661847 | None:intergenic | 20.0% |
| !!! | TTTTAGTGGTTAGATTAATT+TGG | - | chr2_1:11662058-11662077 | Msa0195030:intron | 20.0% |
| !!! | TAGATTAATTTGGTTATTGT+TGG | - | chr2_1:11662068-11662087 | Msa0195030:intron | 20.0% |
| !! | ATACAACTCTATAAAGATTA+TGG | + | chr2_1:11662239-11662258 | None:intergenic | 20.0% |
| !!! | AAAATTGATTTTGACATGTT+TGG | - | chr2_1:11662327-11662346 | Msa0195030:intron | 20.0% |
| !! | CAATAGTTATTATAACCATA+AGG | + | chr2_1:11662788-11662807 | None:intergenic | 20.0% |
| !!! | ATAATTTTGTTTTAGTTCTC+TGG | + | chr2_1:11662828-11662847 | None:intergenic | 20.0% |
| !! | GAGAACTAAAACAAAATTAT+TGG | - | chr2_1:11662828-11662847 | Msa0195030:intron | 20.0% |
| !! | ATCATCTTAAATATCACAAA+AGG | + | chr2_1:11662880-11662899 | None:intergenic | 20.0% |
| !! | TTAAGATGATATAACAAGAA+TGG | - | chr2_1:11662890-11662909 | Msa0195030:intron | 20.0% |
| !! | AACATAAGTATTTGATGTTA+TGG | - | chr2_1:11663418-11663437 | Msa0195030:intron | 20.0% |
| !!! | TTTAGTTTTTTTTCTTTCCT+TGG | - | chr2_1:11663675-11663694 | Msa0195030:intron | 20.0% |
| !!! | CTATATAAGCTATTTTCATA+AGG | + | chr2_1:11663844-11663863 | None:intergenic | 20.0% |
| !! | TGAAATGTAAGTAAATAATC+GGG | + | chr2_1:11664202-11664221 | None:intergenic | 20.0% |
| ! | ACACTGAAGAATGTATTTAT+AGG | + | chr2_1:11661647-11661666 | None:intergenic | 25.0% |
| !! | AATTATTCACCCTTGTTTAT+TGG | - | chr2_1:11661858-11661877 | Msa0195030:CDS | 25.0% |
| ! | TTAACAGATCCAATAAACAA+GGG | + | chr2_1:11661870-11661889 | None:intergenic | 25.0% |
| ! | TTTAACAGATCCAATAAACA+AGG | + | chr2_1:11661871-11661890 | None:intergenic | 25.0% |
| !! | ATCACTAATCATAATTTGTC+AGG | + | chr2_1:11662005-11662024 | None:intergenic | 25.0% |
| ! | TTAGTGATGTGTAATGTTTA+TGG | - | chr2_1:11662017-11662036 | Msa0195030:intron | 25.0% |
| !!! | TGATCCTAATTATGTTTTAG+TGG | - | chr2_1:11662044-11662063 | Msa0195030:intron | 25.0% |
| ! | CTAACCACTAAAACATAATT+AGG | + | chr2_1:11662051-11662070 | None:intergenic | 25.0% |
| ! | ATAATTGATCTTGACATGTT+TGG | - | chr2_1:11662257-11662276 | Msa0195030:intron | 25.0% |
| ! | AAAATTGATCTTGACATGTT+TGG | - | chr2_1:11662292-11662311 | Msa0195030:intron | 25.0% |
| ! | ATATACATTCATGTAAGAGT+GGG | + | chr2_1:11662466-11662485 | None:intergenic | 25.0% |
| ! | TATATACATTCATGTAAGAG+TGG | + | chr2_1:11662467-11662486 | None:intergenic | 25.0% |
| ! | AGATGATATAACTAAGTGTT+TGG | + | chr2_1:11662582-11662601 | None:intergenic | 25.0% |
| !! | ATTTTGTAATGCAGATAACT+CGG | + | chr2_1:11662707-11662726 | None:intergenic | 25.0% |
| !! | TTGAAGATTTTCATTTCTGT+TGG | - | chr2_1:11662748-11662767 | Msa0195030:intron | 25.0% |
| ! | TTATCTACTAATTACTGTAG+TGG | - | chr2_1:11663068-11663087 | Msa0195030:intron | 25.0% |
| ! | TGTATAGTTCAAATATCAAG+TGG | + | chr2_1:11663175-11663194 | None:intergenic | 25.0% |
| ! | AGAAACTAATAACCACTAAA+AGG | + | chr2_1:11663393-11663412 | None:intergenic | 25.0% |
| !!! | AAAATGGATTGACTTGTTAT+TGG | - | chr2_1:11663872-11663891 | Msa0195030:intron | 25.0% |
| ! | GTGATTATTTGATTCATATC+AGG | - | chr2_1:11664135-11664154 | Msa0195030:intron | 25.0% |
| !!! | TTTTTTTGTTATGCGATCTT+CGG | - | chr2_1:11664399-11664418 | Msa0195030:five_prime_UTR | 25.0% |
| !! | AGGAGCAAATTTCATTTTAT+AGG | + | chr2_1:11664525-11664544 | None:intergenic | 25.0% |
| CATTATAGTACAGTGTTTGT+TGG | + | chr2_1:11661619-11661638 | None:intergenic | 30.0% | |
| !!! | TTATCTGTTTTGATGCTTGT+CGG | - | chr2_1:11661930-11661949 | Msa0195030:intron | 30.0% |
| TTGGATGTGAAAACAAAAAC+AGG | - | chr2_1:11662087-11662106 | Msa0195030:intron | 30.0% | |
| TTCAGTTTCCCTTTCAATTA+AGG | - | chr2_1:11662138-11662157 | Msa0195030:intron | 30.0% | |
| TCAGTTTCCCTTTCAATTAA+GGG | - | chr2_1:11662139-11662158 | Msa0195030:intron | 30.0% | |
| TTCTAACTTGAAGCTAGAAT+TGG | - | chr2_1:11662393-11662412 | Msa0195030:intron | 30.0% | |
| TGGGCTAATCTATAAATTTG+AGG | + | chr2_1:11662447-11662466 | None:intergenic | 30.0% | |
| TCAACAGATAACAACAAAAC+AGG | + | chr2_1:11662732-11662751 | None:intergenic | 30.0% | |
| TGACATAGTCAAGAAACAAT+TGG | - | chr2_1:11662959-11662978 | Msa0195030:intron | 30.0% | |
| AGAGACAAAAATAACAGGAA+GGG | + | chr2_1:11663231-11663250 | None:intergenic | 30.0% | |
| AGAAGAGAGACAAAAATAAC+AGG | + | chr2_1:11663236-11663255 | None:intergenic | 30.0% | |
| TAAGTTCTCATATTTGACCA+TGG | - | chr2_1:11663328-11663347 | Msa0195030:intron | 30.0% | |
| ! | ACTTCAGTACTGAAATAAAC+TGG | - | chr2_1:11663462-11663481 | Msa0195030:intron | 30.0% |
| !! | GCTATTTTCATAAGGTATCT+AGG | + | chr2_1:11663836-11663855 | None:intergenic | 30.0% |
| TAAAAAACATCATGTCAAGC+AGG | + | chr2_1:11664014-11664033 | None:intergenic | 30.0% | |
| ! | GTAAGGGCATATAGAAATAT+AGG | + | chr2_1:11664065-11664084 | None:intergenic | 30.0% |
| !!! | TTACATTTCAAGTTTTGTGC+AGG | - | chr2_1:11664212-11664231 | Msa0195030:intron | 30.0% |
| AACTCCAAAATAGACATGTA+AGG | + | chr2_1:11664379-11664398 | None:intergenic | 30.0% | |
| ACAGCAAATACTTGTGATTT+AGG | + | chr2_1:11664545-11664564 | None:intergenic | 30.0% | |
| ! | TAGTACAGTGTTTGTTGGTT+TGG | + | chr2_1:11661614-11661633 | None:intergenic | 35.0% |
| TATTGCAGCATACCATAGAT+TGG | + | chr2_1:11661804-11661823 | None:intergenic | 35.0% | |
| TCGGTGTAATTTGGATATGT+TGG | - | chr2_1:11661949-11661968 | Msa0195030:intron | 35.0% | |
| AAAAACAGGTTTCTTGTGCT+AGG | - | chr2_1:11662101-11662120 | Msa0195030:intron | 35.0% | |
| TTGAAAGGGAAACTGAACTT+GGG | + | chr2_1:11662135-11662154 | None:intergenic | 35.0% | |
| ATTGAAAGGGAAACTGAACT+TGG | + | chr2_1:11662136-11662155 | None:intergenic | 35.0% | |
| TTTCCCTTTCAATTAAGGGA+AGG | - | chr2_1:11662143-11662162 | Msa0195030:intron | 35.0% | |
| GTTCCTTCCCTTAATTGAAA+GGG | + | chr2_1:11662149-11662168 | None:intergenic | 35.0% | |
| AGTTCCTTCCCTTAATTGAA+AGG | + | chr2_1:11662150-11662169 | None:intergenic | 35.0% | |
| TTGAGGCTCAAATTCAATTG+TGG | + | chr2_1:11662430-11662449 | None:intergenic | 35.0% | |
| AGTATCTTTATGCTTAGCCT+GGG | - | chr2_1:11662618-11662637 | Msa0195030:intron | 35.0% | |
| ! | CATTTGTCGTCTTTAGTTTC+TGG | - | chr2_1:11662660-11662679 | Msa0195030:intron | 35.0% |
| CAGATAACTCGGTACAAATA+TGG | + | chr2_1:11662696-11662715 | None:intergenic | 35.0% | |
| GAGTTATCAATGATGCCTTA+TGG | - | chr2_1:11662770-11662789 | Msa0195030:intron | 35.0% | |
| ATTATTGGGCAGTTGTAATG+TGG | - | chr2_1:11662843-11662862 | Msa0195030:intron | 35.0% | |
| ! | AATGGACGTTAATTTTGTGC+AGG | - | chr2_1:11662908-11662927 | Msa0195030:intron | 35.0% |
| AACAGTTGAATCATCTGACA+GGG | + | chr2_1:11662985-11663004 | None:intergenic | 35.0% | |
| TAACAGTTGAATCATCTGAC+AGG | + | chr2_1:11662986-11663005 | None:intergenic | 35.0% | |
| TCAGATGATTCAACTGTTAC+TGG | - | chr2_1:11662987-11663006 | Msa0195030:intron | 35.0% | |
| GAGAGACAAAAATAACAGGA+AGG | + | chr2_1:11663232-11663251 | None:intergenic | 35.0% | |
| ! | TCTCTCTTCTCATGATTTGT+TGG | - | chr2_1:11663246-11663265 | Msa0195030:intron | 35.0% |
| AAAGGATGATCATGGATTTC+AGG | + | chr2_1:11663375-11663394 | None:intergenic | 35.0% | |
| ! | ATCCATGATCATCCTTTTAG+TGG | - | chr2_1:11663378-11663397 | Msa0195030:intron | 35.0% |
| AACCACTAAAAGGATGATCA+TGG | + | chr2_1:11663383-11663402 | None:intergenic | 35.0% | |
| ATCAGAGACGCAACAAATAT+AGG | + | chr2_1:11663564-11663583 | None:intergenic | 35.0% | |
| TCATATAGCTCAAGCAGTAA+GGG | + | chr2_1:11664097-11664116 | None:intergenic | 35.0% | |
| ATCATATAGCTCAAGCAGTA+AGG | + | chr2_1:11664098-11664117 | None:intergenic | 35.0% | |
| GCTTGAGCTATATGATCAAA+TGG | - | chr2_1:11664102-11664121 | Msa0195030:intron | 35.0% | |
| AGGAAAATCAAAACAGTGTC+TGG | - | chr2_1:11664155-11664174 | Msa0195030:intron | 35.0% | |
| ! | TGTAACCGCTAGATATTTTC+TGG | - | chr2_1:11664446-11664465 | Msa0195030:five_prime_UTR | 35.0% |
| ATGGTCCAGAAAATATCTAG+CGG | + | chr2_1:11664454-11664473 | None:intergenic | 35.0% | |
| ! | ACTCTGATTCGATACTTTCG+AGG | + | chr2_1:11661569-11661588 | None:intergenic | 40.0% |
| !! | CGAAAGTATCGAATCAGAGT+TGG | - | chr2_1:11661569-11661588 | Msa0195030:three_prime_UTR | 40.0% |
| !!! | TTGGTTTGGTTGAGGTTTTG+AGG | + | chr2_1:11661600-11661619 | None:intergenic | 40.0% |
| !! | AGTGTTTGTTGGTTTGGTTG+AGG | + | chr2_1:11661608-11661627 | None:intergenic | 40.0% |
| ! | ATCTGAGATCTAAGGAAGGA+CGG | + | chr2_1:11661719-11661738 | None:intergenic | 40.0% |
| ! | AGAGATCTGAGATCTAAGGA+AGG | + | chr2_1:11661723-11661742 | None:intergenic | 40.0% |
| ! | AGAGAGAGATCTGAGATCTA+AGG | + | chr2_1:11661727-11661746 | None:intergenic | 40.0% |
| AGATCTCTCTCTCTTTCCAA+TGG | - | chr2_1:11661735-11661754 | Msa0195030:three_prime_UTR | 40.0% | |
| ! | TACCATAGATTGGTTGGAGA+GGG | + | chr2_1:11661794-11661813 | None:intergenic | 40.0% |
| ! | ATACCATAGATTGGTTGGAG+AGG | + | chr2_1:11661795-11661814 | None:intergenic | 40.0% |
| TGATGCTTGTCGGTGTAATT+TGG | - | chr2_1:11661940-11661959 | Msa0195030:intron | 40.0% | |
| TTTGGCTGCAAAGCAATAGA+TGG | + | chr2_1:11662175-11662194 | None:intergenic | 40.0% | |
| TCTATTGCTTTGCAGCCAAA+AGG | - | chr2_1:11662175-11662194 | Msa0195030:intron | 40.0% | |
| AGGCTCAAATTCAATTGTGG+AGG | + | chr2_1:11662427-11662446 | None:intergenic | 40.0% | |
| GAGTATCTTTATGCTTAGCC+TGG | - | chr2_1:11662617-11662636 | Msa0195030:intron | 40.0% | |
| ! | TTTATGCTTAGCCTGGGTTT+TGG | - | chr2_1:11662624-11662643 | Msa0195030:intron | 40.0% |
| GAGTCTAAATTTACCGCACT+TGG | - | chr2_1:11663011-11663030 | Msa0195030:intron | 40.0% | |
| !! | TCATGATTTGTTGGAGCAAG+AGG | - | chr2_1:11663255-11663274 | Msa0195030:intron | 40.0% |
| TTTCTTTCCTTGGTTGTCTG+AGG | - | chr2_1:11663685-11663704 | Msa0195030:intron | 40.0% | |
| TTCTTTCCTTGGTTGTCTGA+GGG | - | chr2_1:11663686-11663705 | Msa0195030:intron | 40.0% | |
| TGTTTATCCAAACAGAGTCC+TGG | - | chr2_1:11663981-11664000 | Msa0195030:CDS | 40.0% | |
| GTAAGGGTCGTGTAATGTAA+GGG | + | chr2_1:11664081-11664100 | None:intergenic | 40.0% | |
| AGTAAGGGTCGTGTAATGTA+AGG | + | chr2_1:11664082-11664101 | None:intergenic | 40.0% | |
| ! | CTCTTTGCTAGTTTAAGCCT+TGG | + | chr2_1:11664352-11664371 | None:intergenic | 40.0% |
| CAAGGCTTAAACTAGCAAAG+AGG | - | chr2_1:11664350-11664369 | Msa0195030:CDS | 40.0% | |
| ! | GAGGCCTTACATGTCTATTT+TGG | - | chr2_1:11664372-11664391 | Msa0195030:five_prime_UTR | 40.0% |
| TAACAAACACTCACACGTGC+CGG | - | chr2_1:11661543-11661562 | Msa0195030:three_prime_UTR | 45.0% | |
| TGATTCGATACTTTCGAGGC+CGG | + | chr2_1:11661565-11661584 | None:intergenic | 45.0% | |
| GCAGCATACCATAGATTGGT+TGG | + | chr2_1:11661800-11661819 | None:intergenic | 45.0% | |
| GTTTCTTGTGCTAGGATCTC+TGG | - | chr2_1:11662109-11662128 | Msa0195030:intron | 45.0% | |
| ! | ACATGAAACCGACGTCCTTT+TGG | + | chr2_1:11662193-11662212 | None:intergenic | 45.0% |
| !!! | TTAGCCTGGGTTTTGGATTG+TGG | - | chr2_1:11662631-11662650 | Msa0195030:intron | 45.0% |
| TAAACCAGAGACTGTGCAGA+AGG | - | chr2_1:11662932-11662951 | Msa0195030:intron | 45.0% | |
| AAGAGAATCAGCTCCAAGTG+CGG | + | chr2_1:11663027-11663046 | None:intergenic | 45.0% | |
| ! | TGGAGCTGATTCTCTTGACA+CGG | - | chr2_1:11663031-11663050 | Msa0195030:intron | 45.0% |
| GAGACTCGATTGACAATCAG+TGG | + | chr2_1:11663598-11663617 | None:intergenic | 45.0% | |
| AAAATGCCCTCAGACAACCA+AGG | + | chr2_1:11663695-11663714 | None:intergenic | 45.0% | |
| !!! | TTGGTTGTCTGAGGGCATTT+TGG | - | chr2_1:11663694-11663713 | Msa0195030:intron | 45.0% |
| ATACAGACCAGGACTCTGTT+TGG | + | chr2_1:11663991-11664010 | None:intergenic | 45.0% | |
| ! | TGTGCAGGTTGAGATTGTGA+TGG | - | chr2_1:11664227-11664246 | Msa0195030:intron | 45.0% |
| ! | GTGCAGGTTGAGATTGTGAT+GGG | - | chr2_1:11664228-11664247 | Msa0195030:intron | 45.0% |
| ! | TGAGATTGTGATGGGACTTG+AGG | - | chr2_1:11664236-11664255 | Msa0195030:intron | 45.0% |
| ATGGGACTTGAGGAGGAATT+TGG | - | chr2_1:11664246-11664265 | Msa0195030:intron | 45.0% | |
| GGAGGAATTTGGCATTAGTG+TGG | - | chr2_1:11664257-11664276 | Msa0195030:intron | 45.0% | |
| CATGTCAGCAGCTTCTTGAA+CGG | + | chr2_1:11664310-11664329 | None:intergenic | 45.0% | |
| TGACAAGCTTCTTGAGACCA+AGG | - | chr2_1:11664332-11664351 | Msa0195030:CDS | 45.0% | |
| GGCTTAAACTAGCAAAGAGG+AGG | - | chr2_1:11664353-11664372 | Msa0195030:exon | 45.0% | |
| !! | GTTGTGGTGATGGAAGCCAT+TGG | + | chr2_1:11661754-11661773 | None:intergenic | 50.0% |
| AGACATGGAGGTTGTGGTGA+TGG | + | chr2_1:11661764-11661783 | None:intergenic | 50.0% | |
| GATGAGAGACATGGAGGTTG+TGG | + | chr2_1:11661770-11661789 | None:intergenic | 50.0% | |
| CTCCCTCTCCAACCAATCTA+TGG | - | chr2_1:11661789-11661808 | Msa0195030:CDS | 50.0% | |
| CTTTGCAGCCAAAAGGACGT+CGG | - | chr2_1:11662182-11662201 | Msa0195030:intron | 50.0% | |
| TCGGTTTCATGTCACATGCG+CGG | - | chr2_1:11662201-11662220 | Msa0195030:intron | 50.0% | |
| CTCTCCACAATCCAAAACCC+AGG | + | chr2_1:11662638-11662657 | None:intergenic | 50.0% | |
| TTGACCATGGCATCCTGTGA+TGG | - | chr2_1:11663341-11663360 | Msa0195030:intron | 50.0% | |
| TGACCATGGCATCCTGTGAT+GGG | - | chr2_1:11663342-11663361 | Msa0195030:intron | 50.0% | |
| AATCCCATCACAGGATGCCA+TGG | + | chr2_1:11663348-11663367 | None:intergenic | 50.0% | |
| TCAGGAGAGAATCCCATCAC+AGG | + | chr2_1:11663357-11663376 | None:intergenic | 50.0% | |
| TGTCAAGCAGGATACAGACC+AGG | + | chr2_1:11664002-11664021 | None:intergenic | 50.0% | |
| ! | GATTGTGATGGGACTTGAGG+AGG | - | chr2_1:11664239-11664258 | Msa0195030:intron | 50.0% |
| ! | TTGAACGGTGGTGATGCTCT+GGG | + | chr2_1:11664295-11664314 | None:intergenic | 50.0% |
| GAGGGAGATGAGAGACATGG+AGG | + | chr2_1:11661776-11661795 | None:intergenic | 55.0% | |
| GGAGAGGGAGATGAGAGACA+TGG | + | chr2_1:11661779-11661798 | None:intergenic | 55.0% | |
| CACACCTTCTGCACAGTCTC+TGG | + | chr2_1:11662939-11662958 | None:intergenic | 55.0% | |
| ! | CTTGAACGGTGGTGATGCTC+TGG | + | chr2_1:11664296-11664315 | None:intergenic | 55.0% |
| GTCAGCAGCTTCTTGAACGG+TGG | + | chr2_1:11664307-11664326 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 11661541 | 11664584 | 11661541 | ID=Msa0195030;Name=Msa0195030 |
| chr2_1 | mRNA | 11661541 | 11664584 | 11661541 | ID=Msa0195030-mRNA-1;Parent=Msa0195030;Name=Msa0195030-mRNA-1;_AED=0.03;_eAED=0.03;_QI=213|1|1|1|1|1|4|225|139 |
| chr2_1 | exon | 11661541 | 11661891 | 11661541 | ID=Msa0195030-mRNA-1:exon:5147;Parent=Msa0195030-mRNA-1 |
| chr2_1 | exon | 11663073 | 11663195 | 11663073 | ID=Msa0195030-mRNA-1:exon:5146;Parent=Msa0195030-mRNA-1 |
| chr2_1 | exon | 11663903 | 11664016 | 11663903 | ID=Msa0195030-mRNA-1:exon:5145;Parent=Msa0195030-mRNA-1 |
| chr2_1 | exon | 11664315 | 11664584 | 11664315 | ID=Msa0195030-mRNA-1:exon:5144;Parent=Msa0195030-mRNA-1 |
| chr2_1 | five_prime_UTR | 11664372 | 11664584 | 11664372 | ID=Msa0195030-mRNA-1:five_prime_utr;Parent=Msa0195030-mRNA-1 |
| chr2_1 | CDS | 11664315 | 11664371 | 11664315 | ID=Msa0195030-mRNA-1:cds;Parent=Msa0195030-mRNA-1 |
| chr2_1 | CDS | 11663903 | 11664016 | 11663903 | ID=Msa0195030-mRNA-1:cds;Parent=Msa0195030-mRNA-1 |
| chr2_1 | CDS | 11663073 | 11663195 | 11663073 | ID=Msa0195030-mRNA-1:cds;Parent=Msa0195030-mRNA-1 |
| chr2_1 | CDS | 11661766 | 11661891 | 11661766 | ID=Msa0195030-mRNA-1:cds;Parent=Msa0195030-mRNA-1 |
| chr2_1 | three_prime_UTR | 11661541 | 11661765 | 11661541 | ID=Msa0195030-mRNA-1:three_prime_utr;Parent=Msa0195030-mRNA-1 |
| Gene Sequence |
| Protein sequence |
