AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1079620

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1079620 MtrunA17_Chr7g0264871 99.359 468 3 0 1 468 1 468 0.0 964
Msa1079620 MtrunA17_Chr1g0180401 81.481 486 70 4 1 467 1 485 0.0 763
Msa1079620 MtrunA17_Chr1g0210311 66.946 478 139 4 1 460 1 477 0.0 661
Msa1079620 MtrunA17_Chr6g0458891 63.496 452 164 1 9 459 43 494 0.0 609
Msa1079620 MtrunA17_Chr3g0123051 65.871 419 143 0 42 460 83 501 0.0 593
Msa1079620 MtrunA17_Chr3g0119261 65.843 445 152 0 14 458 65 509 0.0 592
Msa1079620 MtrunA17_Chr1g0148671 60.909 440 168 3 23 459 39 477 0.0 550
Msa1079620 MtrunA17_Chr3g0138441 58.222 450 186 2 12 459 35 484 0.0 544
Msa1079620 MtrunA17_Chr4g0062821 53.796 461 193 5 16 459 27 484 0.0 527
Msa1079620 MtrunA17_Chr1g0211361 40.319 439 252 4 30 461 1 436 3.69e-120 358
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1079620 AT3G09880.1 77.113 485 86 2 1 460 1 485 0.0 745
Msa1079620 AT5G03470.1 72.990 485 106 2 1 460 1 485 0.0 731
Msa1079620 AT4G15415.1 62.222 495 150 3 1 459 1 494 0.0 620
Msa1079620 AT4G15415.4 62.222 495 150 3 1 459 1 494 0.0 620
Msa1079620 AT4G15415.2 62.222 495 150 3 1 459 1 494 0.0 620
Msa1079620 AT4G15415.5 62.222 495 150 3 1 459 1 494 0.0 620
Msa1079620 AT3G21650.1 66.370 449 139 1 11 459 79 515 0.0 618
Msa1079620 AT3G21650.2 66.370 449 139 1 11 459 79 515 0.0 618
Msa1079620 AT3G54930.2 63.083 493 148 3 1 459 1 493 0.0 613
Msa1079620 AT3G54930.1 63.083 493 148 3 1 459 1 493 0.0 613
Msa1079620 AT3G26020.2 68.900 418 130 0 45 462 92 509 0.0 605
Msa1079620 AT3G26020.5 68.900 418 130 0 45 462 92 509 0.0 605
Msa1079620 AT3G26020.1 68.900 418 130 0 45 462 92 509 0.0 605
Msa1079620 AT3G26020.6 68.900 418 130 0 45 462 92 509 0.0 605
Msa1079620 AT1G13460.2 68.269 416 132 0 45 460 71 486 0.0 603
Msa1079620 AT1G13460.1 68.269 416 132 0 45 460 71 486 0.0 603
Msa1079620 AT5G25510.1 59.346 428 171 1 32 459 55 479 0.0 538
Msa1079620 AT3G26030.1 57.489 454 177 5 8 459 34 473 0.0 530
Msa1079620 AT3G26020.4 54.274 503 150 3 8 462 58 528 0.0 522
Msa1079620 AT4G15415.3 64.160 399 106 3 1 363 1 398 1.37e-180 512
Msa1079620 AT3G26020.7 57.238 449 132 4 45 462 92 511 1.73e-173 497
Msa1079620 AT3G26020.8 57.238 449 132 4 45 462 92 511 1.73e-173 497
Msa1079620 AT3G26020.3 57.238 449 132 4 45 462 92 511 1.73e-173 497
Msa1079620 AT3G54930.3 60.705 397 122 3 1 363 1 397 3.15e-162 464

Find 154 sgRNAs with CRISPR-Local

Find 538 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACGATATTGCATCGTGTTTA+TGG 0.078969 7_2:+78854926 Msa1079620:CDS
CTCCAATGCTTCGAATATTA+TGG 0.122359 7_2:-78860651 None:intergenic
TCGTGTTTATGGAAAATTTA+TGG 0.183782 7_2:+78854937 Msa1079620:CDS
TCCAATGAACAATCCCATTT+AGG 0.219486 7_2:-78860916 None:intergenic
CCGCAGCTCTTCCACCTCTT+TGG 0.232500 7_2:-78860804 None:intergenic
CATTGGAACCCAGCTGTAAA+TGG 0.237714 7_2:+78860689 Msa1079620:CDS
ATTAATAGCCTTTCTAATAA+AGG 0.241555 7_2:-78854969 None:intergenic
GCAATACGACAGTCCTGTTT+TGG 0.242652 7_2:-78860628 None:intergenic
ATATACACTCCTTGCCATTT+TGG 0.246955 7_2:+78860959 Msa1079620:three_prime_UTR
AGAGTGCCAGAGGCAATATT+TGG 0.281893 7_2:+78860766 Msa1079620:CDS
ATGGAGCTTCTTGAGATTCT+TGG 0.283316 7_2:+78855040 Msa1079620:CDS
TGATTATCCAACGAAGAAAA+TGG 0.286604 7_2:-78861032 None:intergenic
GTGTGTTTGTGTTTGTGTTT+TGG 0.296585 7_2:-78854167 None:intergenic
ATTCTTGGGAGTATAATTAA+TGG 0.310293 7_2:+78855055 Msa1079620:CDS
TCAAGAAGAGATGATCAAAA+TGG 0.317290 7_2:+78854643 Msa1079620:CDS
TGCTTGATTTGTACTTTGAT+TGG 0.318012 7_2:+78861247 Msa1079620:three_prime_UTR
TCCAATGCTTCGAATATTAT+GGG 0.318911 7_2:-78860650 None:intergenic
TGAGAGACACAGTGGGATTA+TGG 0.319910 7_2:+78855021 Msa1079620:CDS
AGATGCGACGTCGTTAGCTT+AGG 0.320895 7_2:+78854276 Msa1079620:five_prime_UTR
TTGGTTGAATTTATTCAATC+TGG 0.326325 7_2:+78854596 Msa1079620:CDS
AGCTAGCGGATACTGTTATT+CGG 0.334615 7_2:+78855215 Msa1079620:CDS
GCTAGCGGATACTGTTATTC+GGG 0.334998 7_2:+78855216 Msa1079620:CDS
TTAATAGCCTTTCTAATAAA+GGG 0.336414 7_2:-78854968 None:intergenic
GAGACAAACGTTGATGGAAT+TGG 0.337460 7_2:+78854577 Msa1079620:CDS
TGGTACACAGCAACCGGTTT+AGG 0.341959 7_2:-78855145 None:intergenic
AATCAATAATGGCACCAAAA+TGG 0.345894 7_2:-78860973 None:intergenic
CCAATGAACAATCCCATTTA+GGG 0.348262 7_2:-78860915 None:intergenic
TCCTTCTGACAATTAGTTAC+CGG 0.352005 7_2:-78855256 None:intergenic
CCCTAAATGGGATTGTTCAT+TGG 0.368236 7_2:+78860915 Msa1079620:three_prime_UTR
TCCGTCGGTTGAATCGGATT+TGG 0.375570 7_2:-78854354 None:intergenic
TGGAGCTTCTTGAGATTCTT+GGG 0.376232 7_2:+78855041 Msa1079620:CDS
TAGGAAAATGTTCCTTGAAA+TGG 0.379731 7_2:+78860727 Msa1079620:CDS
AGTACAAATCAAGCACAAAA+AGG 0.380932 7_2:-78861239 None:intergenic
GGAAGAGGAGGAGCCGTGTT+TGG 0.387838 7_2:+78854736 Msa1079620:CDS
TTCTTGGGAGTATAATTAAT+GGG 0.388053 7_2:+78855056 Msa1079620:CDS
TCCGATTCAACCGACGGATT+CGG 0.392194 7_2:+78854359 Msa1079620:CDS
CTCTTTCCAAATATTGCCTC+TGG 0.397580 7_2:-78860772 None:intergenic
AGCTAACGACGTCGCATCTC+AGG 0.397895 7_2:-78854272 None:intergenic
TCAGTTTAATTGCCCAAAAC+AGG 0.398489 7_2:+78860615 Msa1079620:CDS
GCCTTTGCATAAACCTAAAC+CGG 0.398905 7_2:+78855132 Msa1079620:CDS
AATCAAGAGACAAACGTTGA+TGG 0.404294 7_2:+78854571 Msa1079620:CDS
TTCGGGGTTTGTTGAAGTAC+TGG 0.408470 7_2:+78855233 Msa1079620:CDS
ACCGAATCCGTCGGTTGAAT+CGG 0.409965 7_2:-78854360 None:intergenic
ACAATTCAGCATCCATTTCA+AGG 0.418293 7_2:-78860739 None:intergenic
GACGTCGTTAGCTTAGGGTT+AGG 0.419726 7_2:+78854282 Msa1079620:five_prime_UTR
CGGGGAACTGGAGGAAGTGC+TGG 0.420365 7_2:+78855291 Msa1079620:CDS
AGAGATGATCAAAATGGTTT+CGG 0.423321 7_2:+78854649 Msa1079620:CDS
AAGAGCTGCGGGAATTGAAT+TGG 0.425294 7_2:+78860816 Msa1079620:CDS
TCATAGACCCTTTATTAGAA+AGG 0.428374 7_2:+78854961 Msa1079620:CDS
GCAGATGCGGCTGCACAGAA+TGG 0.431067 7_2:+78860848 Msa1079620:CDS
ATGGGTTGACTGTGAATGTT+AGG 0.431071 7_2:+78860708 Msa1079620:CDS
TGCTGATGGTACACAGCAAC+CGG 0.436247 7_2:-78855151 None:intergenic
CCGGCGTATCATGAGAATAC+TGG 0.436638 7_2:+78854695 Msa1079620:CDS
AGAAAGAAACCAATCAATAA+TGG 0.437251 7_2:-78860984 None:intergenic
ACGTCGTTAGCTTAGGGTTA+GGG 0.438231 7_2:+78854283 Msa1079620:five_prime_UTR
TGAGCTTCTGCTTAGATATG+TGG 0.440496 7_2:+78854790 Msa1079620:CDS
GGCAACAAATCTGAAGCTTC+CGG 0.442065 7_2:-78854502 None:intergenic
TTTCACCGATACGTTGAAAT+CGG 0.442963 7_2:+78854535 Msa1079620:CDS
TCCATTGTTCCGCGACGTAC+CGG 0.443183 7_2:+78854454 Msa1079620:CDS
GCCCATAATATTCGAAGCAT+TGG 0.444009 7_2:+78860649 Msa1079620:CDS
GGCTAAGCTGTGATCATATC+CGG 0.444401 7_2:-78860872 None:intergenic
TGGACAAGATGCCGCGGATC+CGG 0.449243 7_2:+78854715 Msa1079620:CDS
AAACACGGCTCCTCCTCTTC+CGG 0.453499 7_2:-78854734 None:intergenic
AAATTCTGTCTCTCGGAAAC+CGG 0.456022 7_2:-78854473 None:intergenic
TGCGGAGTTCCAACGCTGTA+TGG 0.462072 7_2:+78855327 Msa1079620:CDS
GCGTTGGAACTCCGCAGCTT+GGG 0.462250 7_2:-78855320 None:intergenic
CATTTCACAGTTTGTTGAGA+AGG 0.464722 7_2:+78855186 Msa1079620:CDS
CAGATGCGGCTGCACAGAAT+GGG 0.469866 7_2:+78860849 Msa1079620:CDS
TTCACATATTCGCGCTCTCT+AGG 0.474221 7_2:-78854902 None:intergenic
ACAGTCAACCCATTTACAGC+TGG 0.477262 7_2:-78860698 None:intergenic
AGAGACAGAATTTGTTTCTC+CGG 0.478981 7_2:+78854483 Msa1079620:CDS
GATGCGACGTCGTTAGCTTA+GGG 0.481110 7_2:+78854277 Msa1079620:five_prime_UTR
GCTTGATTTGTTTGATTCTG+AGG 0.481523 7_2:+78854877 Msa1079620:CDS
ATAAAGCTGAGGTTTGTTGC+TGG 0.483407 7_2:+78861282 Msa1079620:three_prime_UTR
GTCGGTTGAATCGGATTTGG+AGG 0.488231 7_2:-78854351 None:intergenic
GAACACCACCGTTGATTCAT+CGG 0.490276 7_2:+78854391 Msa1079620:CDS
ATTTCCGTATCTTTCTGTAC+GGG 0.490278 7_2:-78861158 None:intergenic
AGCGTTGGAACTCCGCAGCT+TGG 0.504160 7_2:-78855321 None:intergenic
ATTGGAACCCAGCTGTAAAT+GGG 0.504983 7_2:+78860690 Msa1079620:CDS
AATGGGATTGTTCATTGGAT+AGG 0.505685 7_2:+78860920 Msa1079620:three_prime_UTR
CAGGTTAAACGACGGTGGAT+CGG 0.507623 7_2:-78854253 None:intergenic
CCTGAAAATGCGGACTATTG+AGG 0.510743 7_2:-78855378 None:intergenic
AACTTATGCTCTTCCTTCAT+CGG 0.511189 7_2:-78855088 None:intergenic
GAATCAACGGTGGTGTTCGC+CGG 0.512285 7_2:-78854386 None:intergenic
TGGGTTTGCGTTGCCGATGA+AGG 0.513362 7_2:+78855075 Msa1079620:CDS
AATTTCCGTATCTTTCTGTA+CGG 0.517384 7_2:-78861159 None:intergenic
AGATGCCGCGGATCCGGAAG+AGG 0.517861 7_2:+78854721 Msa1079620:CDS
CAGCTGGGTTCCAATGACTC+TGG 0.519083 7_2:-78860682 None:intergenic
ATTGTTCATTGGATAGGTGG+AGG 0.519158 7_2:+78860926 Msa1079620:three_prime_UTR
AGCTGCAAATGTGGCCACGC+AGG 0.528372 7_2:-78854761 None:intergenic
TCGATTGTTCCCGACGGTGG+TGG 0.529201 7_2:-78854425 None:intergenic
CAGTCAACCCATTTACAGCT+GGG 0.533188 7_2:-78860697 None:intergenic
GGAATTGAATTGGAAGAGAC+TGG 0.537968 7_2:+78860826 Msa1079620:CDS
ATTTCCCGTACAGAAAGATA+CGG 0.539590 7_2:+78861154 Msa1079620:three_prime_UTR
TTTACCACTCATTTCATCGC+CGG 0.540010 7_2:+78854203 Msa1079620:five_prime_UTR
AACCGACGGATTCGGTCCAC+CGG 0.542715 7_2:+78854367 Msa1079620:CDS
CAAAGAGGTGGAAGAGCTGC+GGG 0.543392 7_2:+78860805 Msa1079620:CDS
TTCAAGAAATTAATGAAAGG+AGG 0.548771 7_2:+78854317 Msa1079620:CDS
TCGGTTGAATCGGATTTGGA+GGG 0.549058 7_2:-78854350 None:intergenic
ATCTGGTTCGAGTAAGATAA+CGG 0.549511 7_2:+78854613 Msa1079620:CDS
GGATCGGAGTGGTGGATGAT+CGG 0.550187 7_2:-78854237 None:intergenic
TGCGGCTGCACAGAATGGGC+CGG 0.556439 7_2:+78860853 Msa1079620:CDS
GGGATTGTTCATTGGATAGG+TGG 0.556692 7_2:+78860923 Msa1079620:three_prime_UTR
GTCGTCATACCACCACCGTC+GGG 0.557075 7_2:+78854416 Msa1079620:CDS
CTAGCGGATACTGTTATTCG+GGG 0.561670 7_2:+78855217 Msa1079620:CDS
GAGTGGTAAATTATAGAGAG+AGG 0.563352 7_2:-78854190 None:intergenic
ACCGGTTTAGGTTTATGCAA+AGG 0.566878 7_2:-78855133 None:intergenic
GAGAAACAAATTCTGTCTCT+CGG 0.568258 7_2:-78854480 None:intergenic
ACGACGGTGGATCGGAGTGG+TGG 0.569751 7_2:-78854245 None:intergenic
TGCCGCGGATCCGGAAGAGG+AGG 0.570434 7_2:+78854724 Msa1079620:CDS
ACCGGTACGTCGCGGAACAA+TGG 0.570851 7_2:-78854455 None:intergenic
TTCATCTGATACTGATACGA+AGG 0.572065 7_2:+78854814 Msa1079620:CDS
TCAACGGTGGTGTTCGCCGG+TGG 0.577690 7_2:-78854383 None:intergenic
TCGAACCGATTTCAACGTAT+CGG 0.577950 7_2:-78854540 None:intergenic
TCCAAATCCGATTCAACCGA+CGG 0.579773 7_2:+78854353 Msa1079620:CDS
AGTGGTAAATTATAGAGAGA+GGG 0.581130 7_2:-78854189 None:intergenic
TCATAAACAAGCTGCAAATG+TGG 0.582332 7_2:-78854770 None:intergenic
TGCAGTAAGACAACTGCTGA+TGG 0.583311 7_2:-78855165 None:intergenic
GACGACCGCCGATGAATCAA+CGG 0.583706 7_2:-78854399 None:intergenic
AATTGAGGTGATGATTAAAG+AGG 0.587911 7_2:-78854139 None:intergenic
TCAAGAAATTAATGAAAGGA+GGG 0.589158 7_2:+78854318 Msa1079620:CDS
AAAGAAGAACCATACAGCGT+TGG 0.590494 7_2:-78855336 None:intergenic
GAGGCAATATTTGGAAAGAG+AGG 0.595730 7_2:+78860775 Msa1079620:CDS
GGGTTTGTTGAAGTACTGGC+CGG 0.596100 7_2:+78855237 Msa1079620:CDS
GCTTCGATTGTTCCCGACGG+TGG 0.599372 7_2:-78854428 None:intergenic
GGAACTGGAGGAAGTGCTGG+AGG 0.606772 7_2:+78855294 Msa1079620:CDS
GGCCACGCAGGCTCCAAACA+CGG 0.607803 7_2:-78854749 None:intergenic
GATACGCCGGTGGAAGACAC+CGG 0.608871 7_2:-78854682 None:intergenic
AGCGCTTCGATTGTTCCCGA+CGG 0.609442 7_2:-78854431 None:intergenic
GCCGGTAACTAATTGTCAGA+AGG 0.609922 7_2:+78855255 Msa1079620:CDS
TTTCGACAAACCTGAAAATG+CGG 0.612539 7_2:-78855388 None:intergenic
CTCCTCCTCTTCCGGATCCG+CGG 0.615265 7_2:-78854726 None:intergenic
AGAGGCTAAAGCCAAAGAGG+TGG 0.615613 7_2:+78860793 Msa1079620:CDS
AAGAGAGGCTAAAGCCAAAG+AGG 0.616896 7_2:+78860790 Msa1079620:CDS
GGTCGTCATACCACCACCGT+CGG 0.618504 7_2:+78854415 Msa1079620:CDS
AGCCGTGTTTGGAGCCTGCG+TGG 0.620620 7_2:+78854747 Msa1079620:CDS
CCAAAGAGGTGGAAGAGCTG+CGG 0.622043 7_2:+78860804 Msa1079620:CDS
TTGGAAGAGACTGGCAGATG+CGG 0.630001 7_2:+78860835 Msa1079620:CDS
GCTGGAGGCTACCCAAGCTG+CGG 0.634043 7_2:+78855309 Msa1079620:CDS
ATGTTCAAGAAATTAATGAA+AGG 0.640531 7_2:+78854314 Msa1079620:CDS
CCAGTATTCTCATGATACGC+CGG 0.656519 7_2:-78854695 None:intergenic
TATCGGTGAAATCTAAAGTG+TGG 0.656741 7_2:-78854523 None:intergenic
ATAATGGCACCAAAATGGCA+AGG 0.658366 7_2:-78860968 None:intergenic
AATTGTTTGAAGAGTGCCAG+AGG 0.664237 7_2:+78860756 Msa1079620:CDS
ATGAGACTGAGAGACACAGT+GGG 0.664861 7_2:+78855014 Msa1079620:CDS
CATCTCAGGTTAAACGACGG+TGG 0.679013 7_2:-78854258 None:intergenic
TAAACGACGGTGGATCGGAG+TGG 0.683564 7_2:-78854248 None:intergenic
GTATTCTCATGATACGCCGG+TGG 0.685709 7_2:-78854692 None:intergenic
CACCACCGTTGATTCATCGG+CGG 0.696492 7_2:+78854394 Msa1079620:CDS
TCTCGGAAACCGGTACGTCG+CGG 0.698158 7_2:-78854463 None:intergenic
GAATACTGGACAAGATGCCG+CGG 0.706337 7_2:+78854709 Msa1079620:CDS
TATGAGACTGAGAGACACAG+TGG 0.715552 7_2:+78855013 Msa1079620:CDS
GACCGCCGATGAATCAACGG+TGG 0.723161 7_2:-78854396 None:intergenic
TCGCATCTCAGGTTAAACGA+CGG 0.777037 7_2:-78854261 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CTATTAATAACATATTTTAT+CGG + chr7_2:78854984-78855003 Msa1079620:CDS 10.0%
!! ATTAATATTATACCAAATAA+GGG - chr7_2:78855553-78855572 None:intergenic 10.0%
!! TATTAATATTATACCAAATA+AGG - chr7_2:78855554-78855573 None:intergenic 10.0%
!! GTAATTTACTTAAAAAATAA+AGG - chr7_2:78857083-78857102 None:intergenic 10.0%
!!! TTGTTTCATATTTTATAATA+GGG - chr7_2:78857428-78857447 None:intergenic 10.0%
!!! CACATATTTTAATTTTATTT+TGG - chr7_2:78857452-78857471 None:intergenic 10.0%
!!! ATGAATTTATTTTTCTTAAA+TGG + chr7_2:78857590-78857609 Msa1079620:intron 10.0%
!!! TATTTTCTTTTTATTTTAAG+TGG - chr7_2:78858119-78858138 None:intergenic 10.0%
!!! TTTCTTTTTTGTTTTGTTTT+AGG + chr7_2:78855686-78855705 Msa1079620:intron 15.0%
!!! TTCTTTTTTGTTTTGTTTTA+GGG + chr7_2:78855687-78855706 Msa1079620:intron 15.0%
!!! GTTGTTTCATATTTTATAAT+AGG - chr7_2:78857429-78857448 None:intergenic 15.0%
!! CATATTTAATTATTAAGAGA+GGG + chr7_2:78857677-78857696 Msa1079620:intron 15.0%
!! ATATTTAATTATTAAGAGAG+GGG + chr7_2:78857678-78857697 Msa1079620:intron 15.0%
!!! AATATAAGTTTTACTTTTCA+AGG + chr7_2:78857732-78857751 Msa1079620:intron 15.0%
!!! ATATAAGTTTTACTTTTCAA+GGG + chr7_2:78857733-78857752 Msa1079620:intron 15.0%
!! TTTATAATTGTGTAAATGTT+GGG + chr7_2:78858192-78858211 Msa1079620:intron 15.0%
!!! GTTTTCAGAATTTTTTTTTA+AGG - chr7_2:78859210-78859229 None:intergenic 15.0%
!!! GTTTGTATAAATCTTTTTAT+AGG + chr7_2:78859959-78859978 Msa1079620:intron 15.0%
!! AATCATTATCATTATAAGAA+AGG - chr7_2:78860246-78860265 None:intergenic 15.0%
!!! GCAGTAAAATAATTTTAATT+TGG - chr7_2:78860896-78860915 None:intergenic 15.0%
!! ATGTTCAAGAAATTAATGAA+AGG + chr7_2:78854314-78854333 Msa1079620:CDS 20.0%
!! TTAATAGCCTTTCTAATAAA+GGG - chr7_2:78854971-78854990 None:intergenic 20.0%
!! ATTAATAGCCTTTCTAATAA+AGG - chr7_2:78854972-78854991 None:intergenic 20.0%
!!! TTATAATTACCATTTTCCTT+TGG + chr7_2:78855456-78855475 Msa1079620:intron 20.0%
!! ATTTATAACACAATATCCAA+AGG - chr7_2:78855475-78855494 None:intergenic 20.0%
!! CCAAAACTTATATTAACAAT+GGG - chr7_2:78855578-78855597 None:intergenic 20.0%
!! ACCAAAACTTATATTAACAA+TGG - chr7_2:78855579-78855598 None:intergenic 20.0%
!!! TTTTATCATCACTATTAATG+TGG + chr7_2:78855773-78855792 Msa1079620:intron 20.0%
!!! CATGTAATCTTTTATTAACA+AGG - chr7_2:78856015-78856034 None:intergenic 20.0%
!! CTTGTTAATAAAAGATTACA+TGG + chr7_2:78856013-78856032 Msa1079620:intron 20.0%
!! AAAAAAGTAAATAGCAAGAA+TGG - chr7_2:78856159-78856178 None:intergenic 20.0%
!!! ATTCTTGCTATTTACTTTTT+TGG + chr7_2:78856158-78856177 Msa1079620:intron 20.0%
!! AAAATCAAAATATCCCTATA+TGG - chr7_2:78856202-78856221 None:intergenic 20.0%
!!! CTTTTATAGAGGAATTTAAA+GGG - chr7_2:78856506-78856525 None:intergenic 20.0%
!! ATTTGAATCATTAAAAGCTA+AGG + chr7_2:78856796-78856815 Msa1079620:intron 20.0%
!! TTTGAATCATTAAAAGCTAA+GGG + chr7_2:78856797-78856816 Msa1079620:intron 20.0%
!!! TGTATATTTTAACATAAGAG+GGG - chr7_2:78857145-78857164 None:intergenic 20.0%
!!! GTGTATATTTTAACATAAGA+GGG - chr7_2:78857146-78857165 None:intergenic 20.0%
!!! AGTGTATATTTTAACATAAG+AGG - chr7_2:78857147-78857166 None:intergenic 20.0%
!!! TAATATGTTTTGAATAAGAG+GGG - chr7_2:78857175-78857194 None:intergenic 20.0%
!!! CTAATATGTTTTGAATAAGA+GGG - chr7_2:78857176-78857195 None:intergenic 20.0%
!!! TCTAATATGTTTTGAATAAG+AGG - chr7_2:78857177-78857196 None:intergenic 20.0%
!! TTACTAAAGACAATAAAGTA+TGG + chr7_2:78857477-78857496 Msa1079620:intron 20.0%
!! GCATATTTAATTATTAAGAG+AGG + chr7_2:78857676-78857695 Msa1079620:intron 20.0%
!! TATTTAATTATTAAGAGAGG+GGG + chr7_2:78857679-78857698 Msa1079620:intron 20.0%
!!! GTGTATATTTTATCATAAGA+GGG + chr7_2:78857762-78857781 Msa1079620:intron 20.0%
!!! TGTATATTTTATCATAAGAG+GGG + chr7_2:78857763-78857782 Msa1079620:intron 20.0%
!! ATAAACTTCATGATAACATA+AGG - chr7_2:78858177-78858196 None:intergenic 20.0%
!! GTTTATAATTGTGTAAATGT+TGG + chr7_2:78858191-78858210 Msa1079620:intron 20.0%
!!! AAGTTATTTTGTCTAATAGA+AGG + chr7_2:78858407-78858426 Msa1079620:intron 20.0%
!!! AGTTATTTTGTCTAATAGAA+GGG + chr7_2:78858408-78858427 Msa1079620:intron 20.0%
!! AAACTATAAGAGAAACTATT+AGG + chr7_2:78858611-78858630 Msa1079620:intron 20.0%
!!! AGCAAATTGATAAGTATTTT+AGG - chr7_2:78858826-78858845 None:intergenic 20.0%
!! TTATTATAACTTCCAAGTTT+GGG + chr7_2:78858975-78858994 Msa1079620:intron 20.0%
!!! AGAATTTTTTTTTAAGGATG+TGG - chr7_2:78859204-78859223 None:intergenic 20.0%
!!! TTGTATTTTTATAGCATGTT+TGG - chr7_2:78859254-78859273 None:intergenic 20.0%
!!! AATGTAAATATTTGAAGTCT+AGG - chr7_2:78859416-78859435 None:intergenic 20.0%
!! TTTACATTGCATGTATAAAA+TGG + chr7_2:78859428-78859447 Msa1079620:intron 20.0%
!!! ATGAAACTACATAATAGTTT+TGG - chr7_2:78859647-78859666 None:intergenic 20.0%
!! ACTAGAAACAATAAATGAAA+TGG - chr7_2:78860512-78860531 None:intergenic 20.0%
!!! AACAAACATGCATTTTTTTT+AGG + chr7_2:78861198-78861217 Msa1079620:three_prime_UTR 20.0%
! TTCAAGAAATTAATGAAAGG+AGG + chr7_2:78854317-78854336 Msa1079620:CDS 25.0%
! TCAAGAAATTAATGAAAGGA+GGG + chr7_2:78854318-78854337 Msa1079620:CDS 25.0%
! TTGGTTGAATTTATTCAATC+TGG + chr7_2:78854596-78854615 Msa1079620:CDS 25.0%
! TCGTGTTTATGGAAAATTTA+TGG + chr7_2:78854937-78854956 Msa1079620:CDS 25.0%
!! ATTCTTGGGAGTATAATTAA+TGG + chr7_2:78855055-78855074 Msa1079620:CDS 25.0%
!! TTCTTGGGAGTATAATTAAT+GGG + chr7_2:78855056-78855075 Msa1079620:CDS 25.0%
!! TTTCATTATGTTGATTGAGT+AGG + chr7_2:78855417-78855436 Msa1079620:intron 25.0%
!! CCCATTGTTAATATAAGTTT+TGG + chr7_2:78855575-78855594 Msa1079620:intron 25.0%
! ACAAAACAAAAAAGAAACCT+AGG - chr7_2:78855683-78855702 None:intergenic 25.0%
! TGAGAAATGATGTTATGTTA+GGG - chr7_2:78855833-78855852 None:intergenic 25.0%
!!! AAATTAGTTCTGCTTAACTT+TGG - chr7_2:78855910-78855929 None:intergenic 25.0%
! GTTATGTTCAATAACTGTAA+TGG + chr7_2:78856062-78856081 Msa1079620:intron 25.0%
! TTGATTTCTTATATCACCAT+GGG - chr7_2:78856290-78856309 None:intergenic 25.0%
!! TTTGATTTCTTATATCACCA+TGG - chr7_2:78856291-78856310 None:intergenic 25.0%
! AATCAAATTTAACCCATGTT+GGG - chr7_2:78856364-78856383 None:intergenic 25.0%
!! ATGGGTTAAATTTGATTGTA+AGG + chr7_2:78856367-78856386 Msa1079620:intron 25.0%
! TGGGTTAAATTTGATTGTAA+GGG + chr7_2:78856368-78856387 Msa1079620:intron 25.0%
!! CCTTTTATAGAGGAATTTAA+AGG - chr7_2:78856507-78856526 None:intergenic 25.0%
! CCTTTAAATTCCTCTATAAA+AGG + chr7_2:78856504-78856523 Msa1079620:intron 25.0%
! TTGGGATTTAACTAATTGAA+AGG - chr7_2:78856583-78856602 None:intergenic 25.0%
! TATACATGAAACAGATTGAA+AGG - chr7_2:78856874-78856893 None:intergenic 25.0%
!!! TTCACTTTTCATGTCTTAAA+AGG - chr7_2:78856899-78856918 None:intergenic 25.0%
! ACATGAAAAGTGAAAACAAA+AGG + chr7_2:78856905-78856924 Msa1079620:intron 25.0%
! GAAAATAATAGAAGTGAACT+GGG - chr7_2:78857013-78857032 None:intergenic 25.0%
!! TTCTATTATTTTCGACCATT+TGG + chr7_2:78857020-78857039 Msa1079620:intron 25.0%
! CAAAAATCAAAACTACCAAA+TGG - chr7_2:78857038-78857057 None:intergenic 25.0%
!!! TGTAGATTTTAACATAAGAG+GGG - chr7_2:78857248-78857267 None:intergenic 25.0%
!!! GTGTAGATTTTAACATAAGA+GGG - chr7_2:78857249-78857268 None:intergenic 25.0%
!!! AGTGTAGATTTTAACATAAG+AGG - chr7_2:78857250-78857269 None:intergenic 25.0%
!!! GCAATACTATTTTTTCTGAA+GGG - chr7_2:78857336-78857355 None:intergenic 25.0%
!!! AGCAATACTATTTTTTCTGA+AGG - chr7_2:78857337-78857356 None:intergenic 25.0%
! TTCAGAAAAAATAGTATTGC+TGG + chr7_2:78857336-78857355 Msa1079620:intron 25.0%
! TTGTAATTCAAGCATCTTAT+AGG + chr7_2:78857702-78857721 Msa1079620:intron 25.0%
! TGTAATTCAAGCATCTTATA+GGG + chr7_2:78857703-78857722 Msa1079620:intron 25.0%
!! GGTGTATATTTTATCATAAG+AGG + chr7_2:78857761-78857780 Msa1079620:intron 25.0%
! TGCAAATAATAACAGATCAA+GGG - chr7_2:78858066-78858085 None:intergenic 25.0%
!!! TTTTAGAATTTCAGCCATTT+AGG + chr7_2:78858216-78858235 Msa1079620:intron 25.0%
!! GTTTCTCTTATAGTTTTTCT+AGG - chr7_2:78858607-78858626 None:intergenic 25.0%
! AACTATTAGGAAAGATTTAG+AGG + chr7_2:78858624-78858643 Msa1079620:intron 25.0%
! GTTCTATCATAAACCATATT+TGG - chr7_2:78858664-78858683 None:intergenic 25.0%
! TTGTTGTATATGAAAGTTGT+TGG + chr7_2:78858742-78858761 Msa1079620:intron 25.0%
!!! TAATTCTGAGATGTTTTCTA+TGG - chr7_2:78858904-78858923 None:intergenic 25.0%
! AAACATCTCAGAATTAATGA+TGG + chr7_2:78858908-78858927 Msa1079620:intron 25.0%
! AACATCTCAGAATTAATGAT+GGG + chr7_2:78858909-78858928 Msa1079620:intron 25.0%
! GTTATTATAACTTCCAAGTT+TGG + chr7_2:78858974-78858993 Msa1079620:intron 25.0%
!! CTTTTCAAAAATATTTGCGA+CGG - chr7_2:78859160-78859179 None:intergenic 25.0%
!!! CAAAGAGTATCAATTCATTA+AGG - chr7_2:78859466-78859485 None:intergenic 25.0%
! AATTTCTCCTATGAATTAGA+CGG - chr7_2:78859510-78859529 None:intergenic 25.0%
!! GATTTGGTAAAGCTAATAAA+AGG - chr7_2:78859788-78859807 None:intergenic 25.0%
! TCTCTACTTAGTGATATTTA+AGG + chr7_2:78859932-78859951 Msa1079620:intron 25.0%
! AATATGCTCTTTAGTCATTA+CGG + chr7_2:78860008-78860027 Msa1079620:intron 25.0%
!!! TTAATGTTTCTGGACTATAT+GGG - chr7_2:78860145-78860164 None:intergenic 25.0%
! AGTCATAATCTTAATGTTTC+TGG - chr7_2:78860155-78860174 None:intergenic 25.0%
! TGATAATTAGCATACTGAAT+TGG + chr7_2:78860427-78860446 Msa1079620:intron 25.0%
!!! AATTATTTTACTGCCCTAAA+TGG + chr7_2:78860902-78860921 Msa1079620:three_prime_UTR 25.0%
!!! ATTATTTTACTGCCCTAAAT+GGG + chr7_2:78860903-78860922 Msa1079620:three_prime_UTR 25.0%
! AGAAAGAAACCAATCAATAA+TGG - chr7_2:78860987-78861006 None:intergenic 25.0%
! AGAGCAAAAATAAATTACAG+GGG - chr7_2:78861012-78861031 None:intergenic 25.0%
! GAGAGCAAAAATAAATTACA+GGG - chr7_2:78861013-78861032 None:intergenic 25.0%
AATTGAGGTGATGATTAAAG+AGG - chr7_2:78854142-78854161 None:intergenic 30.0%
!!! TGTGTTTTGGAGTAAAATTG+AGG - chr7_2:78854157-78854176 None:intergenic 30.0%
AGTGGTAAATTATAGAGAGA+GGG - chr7_2:78854192-78854211 None:intergenic 30.0%
TCAAGAAGAGATGATCAAAA+TGG + chr7_2:78854643-78854662 Msa1079620:CDS 30.0%
AGAGATGATCAAAATGGTTT+CGG + chr7_2:78854649-78854668 Msa1079620:CDS 30.0%
TCATAGACCCTTTATTAGAA+AGG + chr7_2:78854961-78854980 Msa1079620:CDS 30.0%
!!! ATTTTCAGGTTTGTCGAAAA+TGG + chr7_2:78855392-78855411 Msa1079620:intron 30.0%
ACACAATATCCAAAGGAAAA+TGG - chr7_2:78855468-78855487 None:intergenic 30.0%
TTGTAAGGTAGATCTATACT+TGG + chr7_2:78855527-78855546 Msa1079620:intron 30.0%
!!! TAATATAAGTTTTGGTTGCG+TGG + chr7_2:78855583-78855602 Msa1079620:intron 30.0%
!!! AACCTAGGTTTTTTTAGTTG+TGG + chr7_2:78855650-78855669 Msa1079620:intron 30.0%
GTGAGAAATGATGTTATGTT+AGG - chr7_2:78855834-78855853 None:intergenic 30.0%
TGTATATCGTGCCAATTAAA+TGG + chr7_2:78855981-78856000 Msa1079620:intron 30.0%
AGGATTGTAGTCCATTTAAT+TGG - chr7_2:78855995-78856014 None:intergenic 30.0%
!!! TGCTATTTACTTTTTTGGTG+AGG + chr7_2:78856163-78856182 Msa1079620:intron 30.0%
TTAGCATAACTGATTAGTGT+TGG + chr7_2:78856220-78856239 Msa1079620:intron 30.0%
TAGCATAACTGATTAGTGTT+GGG + chr7_2:78856221-78856240 Msa1079620:intron 30.0%
CAATCAAATTTAACCCATGT+TGG - chr7_2:78856365-78856384 None:intergenic 30.0%
!!! CGAGTTCATTAAGGTTTTTT+TGG - chr7_2:78856418-78856437 None:intergenic 30.0%
TACTATCTACGTTTATGTGT+AGG + chr7_2:78856454-78856473 Msa1079620:intron 30.0%
AAATTCCTCTATAAAAGGAC+TGG + chr7_2:78856509-78856528 Msa1079620:intron 30.0%
TTAAATCCCAACTTATGACA+TGG + chr7_2:78856592-78856611 Msa1079620:intron 30.0%
TTCACTTATCGTGTCTTAAA+CGG - chr7_2:78856758-78856777 None:intergenic 30.0%
TTAAAAGCTAAGGGCTTATT+TGG + chr7_2:78856806-78856825 Msa1079620:intron 30.0%
TGAAAAGTGAAAACAAAAGG+CGG + chr7_2:78856908-78856927 Msa1079620:intron 30.0%
CGAAAATAATAGAAGTGAAC+TGG - chr7_2:78857014-78857033 None:intergenic 30.0%
TGTAATTCATGCATCTTTGA+GGG - chr7_2:78857115-78857134 None:intergenic 30.0%
!!! TATTTTAACATAAGAGGGGA+GGG - chr7_2:78857141-78857160 None:intergenic 30.0%
!!! ATATTTTAACATAAGAGGGG+AGG - chr7_2:78857142-78857161 None:intergenic 30.0%
TGTAATTCAAGCTTCTCTTA+GGG - chr7_2:78857218-78857237 None:intergenic 30.0%
ATGTAATTCAAGCTTCTCTT+AGG - chr7_2:78857219-78857238 None:intergenic 30.0%
GTAATTCAAGCATCTTATAG+GGG + chr7_2:78857704-78857723 Msa1079620:intron 30.0%
!! TAAGTTTTACTTTTCAAGGG+AGG + chr7_2:78857736-78857755 Msa1079620:intron 30.0%
!! AAGTTTTACTTTTCAAGGGA+GGG + chr7_2:78857737-78857756 Msa1079620:intron 30.0%
! ATATTTTATCATAAGAGGGG+AGG + chr7_2:78857766-78857785 Msa1079620:intron 30.0%
! TATTTTATCATAAGAGGGGA+GGG + chr7_2:78857767-78857786 Msa1079620:intron 30.0%
TGTAATTCAAGCATCTTTGA+GGG + chr7_2:78857793-78857812 Msa1079620:intron 30.0%
TATAGATAATAGATGCGCAA+GGG - chr7_2:78857954-78857973 None:intergenic 30.0%
CTGCAAATAATAACAGATCA+AGG - chr7_2:78858067-78858086 None:intergenic 30.0%
ATGAGGTATAGATACCTAAA+TGG - chr7_2:78858233-78858252 None:intergenic 30.0%
! TAGATTCGCTAGATTGTTTT+CGG - chr7_2:78858336-78858355 None:intergenic 30.0%
! ATCTAATTTTGCGAGGAATT+TGG + chr7_2:78858351-78858370 Msa1079620:intron 30.0%
! TTTTGTCTAATAGAAGGGAT+AGG + chr7_2:78858413-78858432 Msa1079620:intron 30.0%
! CTTACCATCTTTTCTACTAT+AGG - chr7_2:78858478-78858497 None:intergenic 30.0%
TAGAAAAGATGGTAAGAACT+AGG + chr7_2:78858482-78858501 Msa1079620:intron 30.0%
AGTACAAAGAGTAGATAAGA+TGG + chr7_2:78858549-78858568 Msa1079620:intron 30.0%
AGATTTAGAGGTTAATGAGT+TGG + chr7_2:78858636-78858655 Msa1079620:intron 30.0%
! TAATGAGTTGGATCCAAATA+TGG + chr7_2:78858648-78858667 Msa1079620:intron 30.0%
!! TTTTATTTGCTTCCCAAACT+TGG - chr7_2:78858990-78859009 None:intergenic 30.0%
TGAACCAGAATGGTTAAATT+TGG + chr7_2:78859020-78859039 Msa1079620:intron 30.0%
GATTCCAAATTTAACCATTC+TGG - chr7_2:78859027-78859046 None:intergenic 30.0%
! ATTAGAGGTGTATTATGCTA+TGG + chr7_2:78859370-78859389 Msa1079620:intron 30.0%
! AAATATTTGAAGTCTAGGCA+GGG - chr7_2:78859411-78859430 None:intergenic 30.0%
! TAAATATTTGAAGTCTAGGC+AGG - chr7_2:78859412-78859431 None:intergenic 30.0%
! GTGATACTTTTCAAAAGTGA+AGG + chr7_2:78859694-78859713 Msa1079620:intron 30.0%
TTTCAAAAGTGAAGGAAGAA+AGG + chr7_2:78859702-78859721 Msa1079620:intron 30.0%
TTCAAAAGTGAAGGAAGAAA+GGG + chr7_2:78859703-78859722 Msa1079620:intron 30.0%
!! AACTCTGAAATCTCGAAATA+GGG - chr7_2:78859745-78859764 None:intergenic 30.0%
TGGTAAAGCTAATAAAAGGA+AGG - chr7_2:78859784-78859803 None:intergenic 30.0%
AGCTTTACCAAATCTGATAT+TGG + chr7_2:78859794-78859813 Msa1079620:intron 30.0%
! TTGATGACCAATATCAGATT+TGG - chr7_2:78859804-78859823 None:intergenic 30.0%
ATATGCTCTTTAGTCATTAC+GGG + chr7_2:78860009-78860028 Msa1079620:intron 30.0%
!! CTTAATGTTTCTGGACTATA+TGG - chr7_2:78860146-78860165 None:intergenic 30.0%
AAGAAAGGAAATTCTCCATT+AGG - chr7_2:78860231-78860250 None:intergenic 30.0%
AGATGTGAATAAGCATACAA+GGG - chr7_2:78860543-78860562 None:intergenic 30.0%
TAGATGTGAATAAGCATACA+AGG - chr7_2:78860544-78860563 None:intergenic 30.0%
CTTATTCACATCTATACTGT+AGG + chr7_2:78860550-78860569 Msa1079620:intron 30.0%
TCCAATGCTTCGAATATTAT+GGG - chr7_2:78860653-78860672 None:intergenic 30.0%
TAGGAAAATGTTCCTTGAAA+TGG + chr7_2:78860727-78860746 Msa1079620:CDS 30.0%
AATCAATAATGGCACCAAAA+TGG - chr7_2:78860976-78860995 None:intergenic 30.0%
!!! ATTTTGGTGCCATTATTGAT+TGG + chr7_2:78860975-78860994 Msa1079620:three_prime_UTR 30.0%
AGCAAAAATAAATTACAGGG+GGG - chr7_2:78861010-78861029 None:intergenic 30.0%
GAGCAAAAATAAATTACAGG+GGG - chr7_2:78861011-78861030 None:intergenic 30.0%
GGAGAGCAAAAATAAATTAC+AGG - chr7_2:78861014-78861033 None:intergenic 30.0%
TGATTATCCAACGAAGAAAA+TGG - chr7_2:78861035-78861054 None:intergenic 30.0%
AATTTCCGTATCTTTCTGTA+CGG - chr7_2:78861162-78861181 None:intergenic 30.0%
AGTACAAATCAAGCACAAAA+AGG - chr7_2:78861242-78861261 None:intergenic 30.0%
!! TGCTTGATTTGTACTTTGAT+TGG + chr7_2:78861247-78861266 Msa1079620:three_prime_UTR 30.0%
! GTGTGTTTGTGTTTGTGTTT+TGG - chr7_2:78854170-78854189 None:intergenic 35.0%
GAGTGGTAAATTATAGAGAG+AGG - chr7_2:78854193-78854212 None:intergenic 35.0%
GAGAAACAAATTCTGTCTCT+CGG - chr7_2:78854483-78854502 None:intergenic 35.0%
! AGAGACAGAATTTGTTTCTC+CGG + chr7_2:78854483-78854502 Msa1079620:CDS 35.0%
! TATCGGTGAAATCTAAAGTG+TGG - chr7_2:78854526-78854545 None:intergenic 35.0%
TTTCACCGATACGTTGAAAT+CGG + chr7_2:78854535-78854554 Msa1079620:CDS 35.0%
AATCAAGAGACAAACGTTGA+TGG + chr7_2:78854571-78854590 Msa1079620:CDS 35.0%
! ATCTGGTTCGAGTAAGATAA+CGG + chr7_2:78854613-78854632 Msa1079620:CDS 35.0%
! TGGTTTCGGTCAATATTTTC+CGG + chr7_2:78854663-78854682 Msa1079620:CDS 35.0%
TCATAAACAAGCTGCAAATG+TGG - chr7_2:78854773-78854792 None:intergenic 35.0%
TTCATCTGATACTGATACGA+AGG + chr7_2:78854814-78854833 Msa1079620:CDS 35.0%
!! GCTTGATTTGTTTGATTCTG+AGG + chr7_2:78854877-78854896 Msa1079620:CDS 35.0%
ACGATATTGCATCGTGTTTA+TGG + chr7_2:78854926-78854945 Msa1079620:CDS 35.0%
AACTTATGCTCTTCCTTCAT+CGG - chr7_2:78855091-78855110 None:intergenic 35.0%
!! CATTTCACAGTTTGTTGAGA+AGG + chr7_2:78855186-78855205 Msa1079620:CDS 35.0%
! TGAGAAGGATTTTAAGCTAG+CGG + chr7_2:78855201-78855220 Msa1079620:CDS 35.0%
TCCTTCTGACAATTAGTTAC+CGG - chr7_2:78855259-78855278 None:intergenic 35.0%
! CAGAAGGAAGTTCTTTTTCT+CGG + chr7_2:78855271-78855290 Msa1079620:CDS 35.0%
! AGAAGGAAGTTCTTTTTCTC+GGG + chr7_2:78855272-78855291 Msa1079620:CDS 35.0%
TTTCGACAAACCTGAAAATG+CGG - chr7_2:78855391-78855410 None:intergenic 35.0%
GAACTCTTACTCTCTTTGTA+AGG + chr7_2:78855512-78855531 Msa1079620:intron 35.0%
ATCTATACTTGGCCCTTATT+TGG + chr7_2:78855538-78855557 Msa1079620:intron 35.0%
GTCCACAACTAAAAAAACCT+AGG - chr7_2:78855655-78855674 None:intergenic 35.0%
!!! AGGTTTTTTTAGTTGTGGAC+AGG + chr7_2:78855655-78855674 Msa1079620:intron 35.0%
!! TTTATTTTCCTCCATCGACA+AGG - chr7_2:78855742-78855761 None:intergenic 35.0%
TAACATCATTTCTCACGTAC+AGG + chr7_2:78855838-78855857 Msa1079620:intron 35.0%
AACATCATTTCTCACGTACA+GGG + chr7_2:78855839-78855858 Msa1079620:intron 35.0%
AACTGTAATGGTGAAGTTTG+TGG + chr7_2:78856074-78856093 Msa1079620:intron 35.0%
TAATGGTGAAGTTTGTGGTT+TGG + chr7_2:78856079-78856098 Msa1079620:intron 35.0%
AGCATAACTGATTAGTGTTG+GGG + chr7_2:78856222-78856241 Msa1079620:intron 35.0%
GTGTGACTTTATAAACCACA+AGG - chr7_2:78856261-78856280 None:intergenic 35.0%
! ACCTTAATGAACTCGTTTTC+TGG + chr7_2:78856423-78856442 Msa1079620:intron 35.0%
TCCAGAAAACGAGTTCATTA+AGG - chr7_2:78856427-78856446 None:intergenic 35.0%
! AAAGACCAGTCCTTTTATAG+AGG - chr7_2:78856517-78856536 None:intergenic 35.0%
! CTTTTATGAGAACGATGACA+CGG + chr7_2:78856533-78856552 Msa1079620:intron 35.0%
TAGTGAATTTGAACCAGCTA+AGG + chr7_2:78856654-78856673 Msa1079620:intron 35.0%
AGTGAATTTGAACCAGCTAA+GGG + chr7_2:78856655-78856674 Msa1079620:intron 35.0%
GACACGATAAGTGAAAACAA+AGG + chr7_2:78856763-78856782 Msa1079620:intron 35.0%
ACGATAAGTGAAAACAAAGG+CGG + chr7_2:78856766-78856785 Msa1079620:intron 35.0%
ACATGAAACAGATTGAAAGG+TGG - chr7_2:78856871-78856890 None:intergenic 35.0%
GTAATTCATGCATCTTTGAG+GGG - chr7_2:78857114-78857133 None:intergenic 35.0%
GTGTAATTCATGCATCTTTG+AGG - chr7_2:78857116-78857135 None:intergenic 35.0%
!! ATTTTAACATAAGAGGGGAG+GGG - chr7_2:78857140-78857159 None:intergenic 35.0%
!! ATGTTTTGAATAAGAGGGGA+GGG - chr7_2:78857171-78857190 None:intergenic 35.0%
!! TATGTTTTGAATAAGAGGGG+AGG - chr7_2:78857172-78857191 None:intergenic 35.0%
GTAATTCAAGCTTCTCTTAG+GGG - chr7_2:78857217-78857236 None:intergenic 35.0%
!! ATTTTAACATAAGAGGGGAG+GGG - chr7_2:78857140-78857159 None:intergenic 35.0%
!! GATTTTAACATAAGAGGGGA+GGG - chr7_2:78857244-78857263 None:intergenic 35.0%
!! AGATTTTAACATAAGAGGGG+AGG - chr7_2:78857245-78857264 None:intergenic 35.0%
!! AGTTTTACTTTTCAAGGGAG+GGG + chr7_2:78857738-78857757 Msa1079620:intron 35.0%
! ATTTTATCATAAGAGGGGAG+GGG + chr7_2:78857768-78857787 Msa1079620:intron 35.0%
GTGTAATTCAAGCATCTTTG+AGG + chr7_2:78857792-78857811 Msa1079620:intron 35.0%
GTAATTCAAGCATCTTTGAG+GGG + chr7_2:78857794-78857813 Msa1079620:intron 35.0%
TCAAACTAGCTCAATCACTT+GGG + chr7_2:78857907-78857926 Msa1079620:intron 35.0%
ATAGATAATAGATGCGCAAG+GGG - chr7_2:78857953-78857972 None:intergenic 35.0%
GTATAGATAATAGATGCGCA+AGG - chr7_2:78857955-78857974 None:intergenic 35.0%
CGCATCTATTATCTATACAG+AGG + chr7_2:78857957-78857976 Msa1079620:intron 35.0%
ATTATCTATACAGAGGTGAC+TGG + chr7_2:78857964-78857983 Msa1079620:intron 35.0%
TCAGCTAGAAGAACAAAGAA+AGG - chr7_2:78858148-78858167 None:intergenic 35.0%
CTTCATGATAACATAAGGCA+TGG - chr7_2:78858172-78858191 None:intergenic 35.0%
CTAATAGAAGGGATAGGATT+AGG + chr7_2:78858419-78858438 Msa1079620:intron 35.0%
AGCACCTATAGTAGAAAAGA+TGG + chr7_2:78858471-78858490 Msa1079620:intron 35.0%
TAGATAAGATGGAAGAGAGT+CGG + chr7_2:78858560-78858579 Msa1079620:intron 35.0%
! ATATGAAAGTTGTTGGCTGT+TGG + chr7_2:78858749-78858768 Msa1079620:intron 35.0%
!!! GGTTTTGATGATGTATGAGT+AGG - chr7_2:78858805-78858824 None:intergenic 35.0%
!! ACTTATCAATTTGCTGCTGA+AGG + chr7_2:78858831-78858850 Msa1079620:intron 35.0%
! TGCAGATAGATTTGAAGTCT+CGG - chr7_2:78858940-78858959 None:intergenic 35.0%
! TTCTACAAGTTGAACCAGAA+TGG + chr7_2:78859010-78859029 Msa1079620:intron 35.0%
AAACAAAGGGTTTGTGTGTT+GGG - chr7_2:78859312-78859331 None:intergenic 35.0%
AAAACAAAGGGTTTGTGTGT+TGG - chr7_2:78859313-78859332 None:intergenic 35.0%
GAAACTGGAAGTAAGATTAG+AGG + chr7_2:78859355-78859374 Msa1079620:intron 35.0%
TAAGTGTCCGTCTAATTCAT+AGG + chr7_2:78859500-78859519 Msa1079620:intron 35.0%
TCAATGTCATTGTCATACTG+TGG + chr7_2:78859560-78859579 Msa1079620:intron 35.0%
! TCACCATACTTTTCTGTTCA+AGG - chr7_2:78859678-78859697 None:intergenic 35.0%
!! ACTCTGAAATCTCGAAATAG+GGG - chr7_2:78859744-78859763 None:intergenic 35.0%
!! GAACTCTGAAATCTCGAAAT+AGG - chr7_2:78859746-78859765 None:intergenic 35.0%
CCACAAATTCTACATGTTTG+TGG - chr7_2:78859886-78859905 None:intergenic 35.0%
CCACAAACATGTAGAATTTG+TGG + chr7_2:78859883-78859902 Msa1079620:intron 35.0%
GTGATTAACTATACTCTCCT+TGG + chr7_2:78860090-78860109 Msa1079620:intron 35.0%
TTCTGGACTATATGGGTTTA+TGG - chr7_2:78860138-78860157 None:intergenic 35.0%
TAAGATTATGACTGACCTCT+TGG + chr7_2:78860162-78860181 Msa1079620:intron 35.0%
! AAGTTTAAGACAAAGCCAAG+AGG - chr7_2:78860180-78860199 None:intergenic 35.0%
! GGCTTTGTCTTAAACTTGAA+TGG + chr7_2:78860183-78860202 Msa1079620:intron 35.0%
AATGGTAATCATTCCAGATC+AGG + chr7_2:78860201-78860220 Msa1079620:intron 35.0%
! GAGTCATAAAAGTGTGCTTA+AGG + chr7_2:78860274-78860293 Msa1079620:intron 35.0%
! TAAAAGTGTGCTTAAGGATC+AGG + chr7_2:78860280-78860299 Msa1079620:intron 35.0%
!!! ACACGTTAGCTTTTGGATTT+GGG + chr7_2:78860324-78860343 Msa1079620:intron 35.0%
CTTGTGCGAACATTATTGTT+GGG + chr7_2:78860389-78860408 Msa1079620:intron 35.0%
CAAGTCAATTCTAAGCAATC+AGG - chr7_2:78860462-78860481 None:intergenic 35.0%
TCAGTTTAATTGCCCAAAAC+AGG + chr7_2:78860615-78860634 Msa1079620:CDS 35.0%
CTCCAATGCTTCGAATATTA+TGG - chr7_2:78860654-78860673 None:intergenic 35.0%
AGAAAAATGTCCAGAGTCAT+TGG + chr7_2:78860672-78860691 Msa1079620:CDS 35.0%
ACAATTCAGCATCCATTTCA+AGG - chr7_2:78860742-78860761 None:intergenic 35.0%
CCAATGAACAATCCCATTTA+GGG - chr7_2:78860918-78860937 None:intergenic 35.0%
TCCAATGAACAATCCCATTT+AGG - chr7_2:78860919-78860938 None:intergenic 35.0%
AATGGGATTGTTCATTGGAT+AGG + chr7_2:78860920-78860939 Msa1079620:three_prime_UTR 35.0%
!! ATATACACTCCTTGCCATTT+TGG + chr7_2:78860959-78860978 Msa1079620:three_prime_UTR 35.0%
ATTTCCCGTACAGAAAGATA+CGG + chr7_2:78861154-78861173 Msa1079620:three_prime_UTR 35.0%
ATTTCCGTATCTTTCTGTAC+GGG - chr7_2:78861161-78861180 None:intergenic 35.0%
! CGGAAATTTTCTTTTCGCTT+TGG + chr7_2:78861174-78861193 Msa1079620:three_prime_UTR 35.0%
ACAAATCAAGCACAAAAAGG+CGG - chr7_2:78861239-78861258 None:intergenic 35.0%
TTTACCACTCATTTCATCGC+CGG + chr7_2:78854203-78854222 Msa1079620:five_prime_UTR 40.0%
! ATGATCGGAGATGTGTTTTC+CGG - chr7_2:78854225-78854244 None:intergenic 40.0%
AAATTCTGTCTCTCGGAAAC+CGG - chr7_2:78854476-78854495 None:intergenic 40.0%
! TCGAACCGATTTCAACGTAT+CGG - chr7_2:78854543-78854562 None:intergenic 40.0%
! GAGACAAACGTTGATGGAAT+TGG + chr7_2:78854577-78854596 Msa1079620:CDS 40.0%
TGAGCTTCTGCTTAGATATG+TGG + chr7_2:78854790-78854809 Msa1079620:CDS 40.0%
ATGGAGCTTCTTGAGATTCT+TGG + chr7_2:78855040-78855059 Msa1079620:CDS 40.0%
TGGAGCTTCTTGAGATTCTT+GGG + chr7_2:78855041-78855060 Msa1079620:CDS 40.0%
GCCTTTGCATAAACCTAAAC+CGG + chr7_2:78855132-78855151 Msa1079620:CDS 40.0%
! ACCGGTTTAGGTTTATGCAA+AGG - chr7_2:78855136-78855155 None:intergenic 40.0%
! AGCTAGCGGATACTGTTATT+CGG + chr7_2:78855215-78855234 Msa1079620:CDS 40.0%
! GAAGGAAGTTCTTTTTCTCG+GGG + chr7_2:78855273-78855292 Msa1079620:CDS 40.0%
AAAGAAGAACCATACAGCGT+TGG - chr7_2:78855339-78855358 None:intergenic 40.0%
TATCCTTCAAGTCCCAAACT+CGG + chr7_2:78855626-78855645 Msa1079620:intron 40.0%
AAACCTAGGTTACCGAGTTT+GGG - chr7_2:78855641-78855660 None:intergenic 40.0%
AAAACCTAGGTTACCGAGTT+TGG - chr7_2:78855642-78855661 None:intergenic 40.0%
! AATGATGATGTCCTTGTCGA+TGG + chr7_2:78855728-78855747 Msa1079620:intron 40.0%
! GCATAACTGATTAGTGTTGG+GGG + chr7_2:78856223-78856242 Msa1079620:intron 40.0%
TTAACCCATGTTGGGATGTT+AGG - chr7_2:78856356-78856375 None:intergenic 40.0%
! AAGGGAAGTTTTGCGATGAA+TGG + chr7_2:78856386-78856405 Msa1079620:intron 40.0%
! AGGGAAGTTTTGCGATGAAT+GGG + chr7_2:78856387-78856406 Msa1079620:intron 40.0%
ATACCAAATATGCCCTTAGC+TGG - chr7_2:78856670-78856689 None:intergenic 40.0%
!! TGTTTTGAATAAGAGGGGAG+GGG - chr7_2:78857170-78857189 None:intergenic 40.0%
! TTTTAACATAAGAGGGGAGG+GGG - chr7_2:78857139-78857158 None:intergenic 40.0%
ATTCAAGCATCTTATAGGGG+AGG + chr7_2:78857707-78857726 Msa1079620:intron 40.0%
!! GTTTTACTTTTCAAGGGAGG+GGG + chr7_2:78857739-78857758 Msa1079620:intron 40.0%
!! TTTTACTTTTCAAGGGAGGG+GGG + chr7_2:78857740-78857759 Msa1079620:intron 40.0%
! TTGAGCTAGTTTGAGGTTCA+AGG - chr7_2:78857901-78857920 None:intergenic 40.0%
! CAAGTGATTGAGCTAGTTTG+AGG - chr7_2:78857908-78857927 None:intergenic 40.0%
CTCAAACTAGCTCAATCACT+TGG + chr7_2:78857906-78857925 Msa1079620:intron 40.0%
CTCGACTCATGATACAAATG+AGG - chr7_2:78858250-78858269 None:intergenic 40.0%
AAGAATAGCTGCCAGAGATT+AGG - chr7_2:78858273-78858292 None:intergenic 40.0%
! CTAGCGAATCTAATTTTGCG+AGG + chr7_2:78858344-78858363 Msa1079620:intron 40.0%
GAGGAATTTGGCTACTTACA+AGG + chr7_2:78858363-78858382 Msa1079620:intron 40.0%
ACACCATTAGAGAGAGAGTT+GGG + chr7_2:78858446-78858465 Msa1079620:intron 40.0%
AGATGGTAAGAACTAGGCTT+AGG + chr7_2:78858488-78858507 Msa1079620:intron 40.0%
CTTTGTACTACAATGTCCAC+AGG - chr7_2:78858538-78858557 None:intergenic 40.0%
! TGATGATGTATGAGTAGGAC+TGG - chr7_2:78858800-78858819 None:intergenic 40.0%
! CCAAAGAGGTGCAAAACAAA+GGG - chr7_2:78859325-78859344 None:intergenic 40.0%
! TCCAAAGAGGTGCAAAACAA+AGG - chr7_2:78859326-78859345 None:intergenic 40.0%
TTTCTCACTCAGTTCCAAAG+AGG - chr7_2:78859339-78859358 None:intergenic 40.0%
! TTTGGAACTGAGTGAGAAAC+TGG + chr7_2:78859340-78859359 Msa1079620:intron 40.0%
!! TGATTCTCTGCTAGCTTTCT+GGG - chr7_2:78859609-78859628 None:intergenic 40.0%
!! ATGATTCTCTGCTAGCTTTC+TGG - chr7_2:78859610-78859629 None:intergenic 40.0%
AAAGCTAGCAGAGAATCATG+AGG + chr7_2:78859611-78859630 Msa1079620:intron 40.0%
CGTCCTTGAACAGAAAAGTA+TGG + chr7_2:78859672-78859691 Msa1079620:intron 40.0%
AAAAGTGAAGGAAGAAAGGG+AGG + chr7_2:78859706-78859725 Msa1079620:intron 40.0%
GAAGAAAGGGAGGAGTAAAT+TGG + chr7_2:78859716-78859735 Msa1079620:intron 40.0%
ACCAGAGATGGAAAATTCGA+AGG + chr7_2:78859845-78859864 Msa1079620:intron 40.0%
! ACCTTCGAATTTTCCATCTC+TGG - chr7_2:78859849-78859868 None:intergenic 40.0%
GAGATGGAAAATTCGAAGGT+TGG + chr7_2:78859849-78859868 Msa1079620:intron 40.0%
CTTTAGTCATTACGGGATTG+AGG + chr7_2:78860016-78860035 Msa1079620:intron 40.0%
! GGGATTGAGGATTTTTCTAC+AGG + chr7_2:78860029-78860048 Msa1079620:intron 40.0%
GTAATCATTCCAGATCAGGT+TGG + chr7_2:78860205-78860224 Msa1079620:intron 40.0%
!!! TCTTCACACACGTTAGCTTT+TGG + chr7_2:78860317-78860336 Msa1079620:intron 40.0%
!!! CACACGTTAGCTTTTGGATT+TGG + chr7_2:78860323-78860342 Msa1079620:intron 40.0%
! TAGCTTTTGGATTTGGGTCT+AGG + chr7_2:78860330-78860349 Msa1079620:intron 40.0%
CCAACAATAATGTTCGCACA+AGG - chr7_2:78860391-78860410 None:intergenic 40.0%
CCTTGTGCGAACATTATTGT+TGG + chr7_2:78860388-78860407 Msa1079620:intron 40.0%
! CAATACGACAGTCCTGTTTT+GGG - chr7_2:78860630-78860649 None:intergenic 40.0%
GCCCATAATATTCGAAGCAT+TGG + chr7_2:78860649-78860668 Msa1079620:CDS 40.0%
ATTGGAACCCAGCTGTAAAT+GGG + chr7_2:78860690-78860709 Msa1079620:CDS 40.0%
! ATGGGTTGACTGTGAATGTT+AGG + chr7_2:78860708-78860727 Msa1079620:CDS 40.0%
!! AATTGTTTGAAGAGTGCCAG+AGG + chr7_2:78860756-78860775 Msa1079620:CDS 40.0%
CTCTTTCCAAATATTGCCTC+TGG - chr7_2:78860775-78860794 None:intergenic 40.0%
GAGGCAATATTTGGAAAGAG+AGG + chr7_2:78860775-78860794 Msa1079620:CDS 40.0%
GGAATTGAATTGGAAGAGAC+TGG + chr7_2:78860826-78860845 Msa1079620:CDS 40.0%
CCCTAAATGGGATTGTTCAT+TGG + chr7_2:78860915-78860934 Msa1079620:three_prime_UTR 40.0%
ATTGTTCATTGGATAGGTGG+AGG + chr7_2:78860926-78860945 Msa1079620:three_prime_UTR 40.0%
ATAATGGCACCAAAATGGCA+AGG - chr7_2:78860971-78860990 None:intergenic 40.0%
! TTGCTCTCCATTTTCTTCGT+TGG + chr7_2:78861025-78861044 Msa1079620:three_prime_UTR 40.0%
!! GTCGTTTTGCAATAAAGCTG+AGG + chr7_2:78861271-78861290 Msa1079620:three_prime_UTR 40.0%
! TTTTCCGGCGATGAAATGAG+TGG - chr7_2:78854210-78854229 None:intergenic 45.0%
TCGCATCTCAGGTTAAACGA+CGG - chr7_2:78854264-78854283 None:intergenic 45.0%
! ACGTCGTTAGCTTAGGGTTA+GGG + chr7_2:78854283-78854302 Msa1079620:five_prime_UTR 45.0%
TCGGTTGAATCGGATTTGGA+GGG - chr7_2:78854353-78854372 None:intergenic 45.0%
TCCAAATCCGATTCAACCGA+CGG + chr7_2:78854353-78854372 Msa1079620:CDS 45.0%
!! GAACACCACCGTTGATTCAT+CGG + chr7_2:78854391-78854410 Msa1079620:CDS 45.0%
! GGCAACAAATCTGAAGCTTC+CGG - chr7_2:78854505-78854524 None:intergenic 45.0%
! TATTTTCCGGTGTCTTCCAC+CGG + chr7_2:78854676-78854695 Msa1079620:CDS 45.0%
CCAGTATTCTCATGATACGC+CGG - chr7_2:78854698-78854717 None:intergenic 45.0%
TTCACATATTCGCGCTCTCT+AGG - chr7_2:78854905-78854924 None:intergenic 45.0%
TATGAGACTGAGAGACACAG+TGG + chr7_2:78855013-78855032 Msa1079620:CDS 45.0%
ATGAGACTGAGAGACACAGT+GGG + chr7_2:78855014-78855033 Msa1079620:CDS 45.0%
TGAGAGACACAGTGGGATTA+TGG + chr7_2:78855021-78855040 Msa1079620:CDS 45.0%
TGCAGTAAGACAACTGCTGA+TGG - chr7_2:78855168-78855187 None:intergenic 45.0%
! GCTAGCGGATACTGTTATTC+GGG + chr7_2:78855216-78855235 Msa1079620:CDS 45.0%
! CTAGCGGATACTGTTATTCG+GGG + chr7_2:78855217-78855236 Msa1079620:CDS 45.0%
!! TTCGGGGTTTGTTGAAGTAC+TGG + chr7_2:78855233-78855252 Msa1079620:CDS 45.0%
GCCGGTAACTAATTGTCAGA+AGG + chr7_2:78855255-78855274 Msa1079620:CDS 45.0%
! AGTTCTTTTTCTCGGGGAAC+TGG + chr7_2:78855279-78855298 Msa1079620:CDS 45.0%
! CCTGAAAATGCGGACTATTG+AGG - chr7_2:78855381-78855400 None:intergenic 45.0%
! CCTCAATAGTCCGCATTTTC+AGG + chr7_2:78855378-78855397 Msa1079620:CDS 45.0%
! TTACCGAGTTTGGGACTTGA+AGG - chr7_2:78855632-78855651 None:intergenic 45.0%
TTAGTTGTGGACAGGTACCT+AGG + chr7_2:78855663-78855682 Msa1079620:intron 45.0%
!!! CTTTTTTGGTGAGGTACGTG+AGG + chr7_2:78856172-78856191 Msa1079620:intron 45.0%
TACGTGAGGTGCACCATATA+GGG + chr7_2:78856186-78856205 Msa1079620:intron 45.0%
! AGTTTTGCGATGAATGGGCA+AGG + chr7_2:78856392-78856411 Msa1079620:intron 45.0%
TAAAGGGCGAGTTCGTAGAA+AGG - chr7_2:78856490-78856509 None:intergenic 45.0%
GCTCAGCCATGTCATAAGTT+GGG - chr7_2:78856601-78856620 None:intergenic 45.0%
TGCTCAGCCATGTCATAAGT+TGG - chr7_2:78856602-78856621 None:intergenic 45.0%
! GAACCAGCTAAGGGCATATT+TGG + chr7_2:78856664-78856683 Msa1079620:intron 45.0%
! TTCATGCATCTTTGAGGGGA+GGG - chr7_2:78857110-78857129 None:intergenic 45.0%
! ATTCATGCATCTTTGAGGGG+AGG - chr7_2:78857111-78857130 None:intergenic 45.0%
TTCAAGCTTCTCTTAGGGGA+GGG - chr7_2:78857213-78857232 None:intergenic 45.0%
ATTCAAGCTTCTCTTAGGGG+AGG - chr7_2:78857214-78857233 None:intergenic 45.0%
! ATTCAAGCATCTTTGAGGGG+AGG + chr7_2:78857797-78857816 Msa1079620:intron 45.0%
! TTCAAGCATCTTTGAGGGGA+GGG + chr7_2:78857798-78857817 Msa1079620:intron 45.0%
GAGGTTCAAGGTTCAAACTC+TGG - chr7_2:78857889-78857908 None:intergenic 45.0%
TGGCTACTTACAAGGTCTGA+TGG + chr7_2:78858371-78858390 Msa1079620:intron 45.0%
GACACCATTAGAGAGAGAGT+TGG + chr7_2:78858445-78858464 Msa1079620:intron 45.0%
CACCATTAGAGAGAGAGTTG+GGG + chr7_2:78858447-78858466 Msa1079620:intron 45.0%
TACCCCAACTCTCTCTCTAA+TGG - chr7_2:78858452-78858471 None:intergenic 45.0%
TGGTAAGAACTAGGCTTAGG+TGG + chr7_2:78858491-78858510 Msa1079620:intron 45.0%
AGAACTAGGCTTAGGTGGTT+TGG + chr7_2:78858496-78858515 Msa1079620:intron 45.0%
GAACTAGGCTTAGGTGGTTT+GGG + chr7_2:78858497-78858516 Msa1079620:intron 45.0%
! AAGCCTTATCCCACAAAGTG+GGG - chr7_2:78858717-78858736 None:intergenic 45.0%
! GAAGCCTTATCCCACAAAGT+GGG - chr7_2:78858718-78858737 None:intergenic 45.0%
TGAGTAGGACTGGAACTATC+AGG - chr7_2:78858790-78858809 None:intergenic 45.0%
!!! CCCTTTGTTTTGCACCTCTT+TGG + chr7_2:78859322-78859341 Msa1079620:intron 45.0%
! TTTGAAGTCTAGGCAGGGTT+TGG - chr7_2:78859406-78859425 None:intergenic 45.0%
GTCATTGTCATACTGTGGCT+TGG + chr7_2:78859565-78859584 Msa1079620:intron 45.0%
TGGAAAATTCGAAGGTTGGC+AGG + chr7_2:78859853-78859872 Msa1079620:intron 45.0%
GGAAAATTCGAAGGTTGGCA+GGG + chr7_2:78859854-78859873 Msa1079620:intron 45.0%
! TATACTCTCCTTGGCCTTCT+GGG + chr7_2:78860099-78860118 Msa1079620:intron 45.0%
AAGTGTGCTTAAGGATCAGG+AGG + chr7_2:78860283-78860302 Msa1079620:intron 45.0%
AAGGATCAGGAGGTTCAGAA+CGG + chr7_2:78860293-78860312 Msa1079620:intron 45.0%
AGGTTAACCTCCATAGAGTG+AGG + chr7_2:78860350-78860369 Msa1079620:intron 45.0%
! CAGAACGAGCTCTCTTTTTG+TGG + chr7_2:78860576-78860595 Msa1079620:CDS 45.0%
! GCAATACGACAGTCCTGTTT+TGG - chr7_2:78860631-78860650 None:intergenic 45.0%
CATTGGAACCCAGCTGTAAA+TGG + chr7_2:78860689-78860708 Msa1079620:CDS 45.0%
CAGTCAACCCATTTACAGCT+GGG - chr7_2:78860700-78860719 None:intergenic 45.0%
ACAGTCAACCCATTTACAGC+TGG - chr7_2:78860701-78860720 None:intergenic 45.0%
! AGAGTGCCAGAGGCAATATT+TGG + chr7_2:78860766-78860785 Msa1079620:CDS 45.0%
AAGAGAGGCTAAAGCCAAAG+AGG + chr7_2:78860790-78860809 Msa1079620:CDS 45.0%
AAGAGCTGCGGGAATTGAAT+TGG + chr7_2:78860816-78860835 Msa1079620:CDS 45.0%
GGCTAAGCTGTGATCATATC+CGG - chr7_2:78860875-78860894 None:intergenic 45.0%
GGGATTGTTCATTGGATAGG+TGG + chr7_2:78860923-78860942 Msa1079620:three_prime_UTR 45.0%
!! ATTAAAAAAAAAAATATTGA+GGG - chr7_2:78857278-78857297 None:intergenic 5.0%
!! AATTAAAAAAAAAAATATTG+AGG - chr7_2:78857279-78857298 None:intergenic 5.0%
!!! ACATATTTTAATTTTATTTT+GGG - chr7_2:78857451-78857470 None:intergenic 5.0%
CAGGTTAAACGACGGTGGAT+CGG - chr7_2:78854256-78854275 None:intergenic 50.0%
CATCTCAGGTTAAACGACGG+TGG - chr7_2:78854261-78854280 None:intergenic 50.0%
! AGATGCGACGTCGTTAGCTT+AGG + chr7_2:78854276-78854295 Msa1079620:five_prime_UTR 50.0%
! GATGCGACGTCGTTAGCTTA+GGG + chr7_2:78854277-78854296 Msa1079620:five_prime_UTR 50.0%
! GACGTCGTTAGCTTAGGGTT+AGG + chr7_2:78854282-78854301 Msa1079620:five_prime_UTR 50.0%
GTCGGTTGAATCGGATTTGG+AGG - chr7_2:78854354-78854373 None:intergenic 50.0%
! TCCGTCGGTTGAATCGGATT+TGG - chr7_2:78854357-78854376 None:intergenic 50.0%
! TCCGATTCAACCGACGGATT+CGG + chr7_2:78854359-78854378 Msa1079620:CDS 50.0%
! ACCGAATCCGTCGGTTGAAT+CGG - chr7_2:78854363-78854382 None:intergenic 50.0%
GTATTCTCATGATACGCCGG+TGG - chr7_2:78854695-78854714 None:intergenic 50.0%
CCGGCGTATCATGAGAATAC+TGG + chr7_2:78854695-78854714 Msa1079620:CDS 50.0%
GAATACTGGACAAGATGCCG+CGG + chr7_2:78854709-78854728 Msa1079620:CDS 50.0%
! TGGTACACAGCAACCGGTTT+AGG - chr7_2:78855148-78855167 None:intergenic 50.0%
TGCTGATGGTACACAGCAAC+CGG - chr7_2:78855154-78855173 None:intergenic 50.0%
!! GGGTTTGTTGAAGTACTGGC+CGG + chr7_2:78855237-78855256 Msa1079620:CDS 50.0%
! TCTTTTTCTCGGGGAACTGG+AGG + chr7_2:78855282-78855301 Msa1079620:CDS 50.0%
AGTCCCAAACTCGGTAACCT+AGG + chr7_2:78855635-78855654 Msa1079620:intron 50.0%
GATGATGTCCTTGTCGATGG+AGG + chr7_2:78855731-78855750 Msa1079620:intron 50.0%
GTACGTGAGGTGCACCATAT+AGG + chr7_2:78856185-78856204 Msa1079620:intron 50.0%
AAAGTCACACGCAATGCCCA+TGG + chr7_2:78856271-78856290 Msa1079620:intron 50.0%
TGCCACCTAACATCCCAACA+TGG + chr7_2:78856348-78856367 Msa1079620:intron 50.0%
GCCACCTAACATCCCAACAT+GGG + chr7_2:78856349-78856368 Msa1079620:intron 50.0%
ACCCATGTTGGGATGTTAGG+TGG - chr7_2:78856353-78856372 None:intergenic 50.0%
! TCATGCATCTTTGAGGGGAG+GGG - chr7_2:78857109-78857128 None:intergenic 50.0%
TCAAGCTTCTCTTAGGGGAG+GGG - chr7_2:78857212-78857231 None:intergenic 50.0%
! TCAAGCATCTTTGAGGGGAG+GGG + chr7_2:78857799-78857818 Msa1079620:intron 50.0%
AATCACTTGGGCCATGCCTT+GGG + chr7_2:78857919-78857938 Msa1079620:intron 50.0%
CATGAGTCGAGCCTAATCTC+TGG + chr7_2:78858259-78858278 Msa1079620:intron 50.0%
CTGGCAGCTATTCTTTGTGC+TGG + chr7_2:78858278-78858297 Msa1079620:intron 50.0%
GCATGTAGAGAGAAGACCTG+TGG + chr7_2:78858519-78858538 Msa1079620:intron 50.0%
GAAGAGAGTCGGATCAGAAG+AGG + chr7_2:78858571-78858590 Msa1079620:intron 50.0%
AGTCGGATCAGAAGAGGTAG+AGG + chr7_2:78858577-78858596 Msa1079620:intron 50.0%
ACAAAGTGGGGTAGGCTACA+TGG - chr7_2:78858705-78858724 None:intergenic 50.0%
ATGTAGCCTACCCCACTTTG+TGG + chr7_2:78858704-78858723 Msa1079620:intron 50.0%
TGTAGCCTACCCCACTTTGT+GGG + chr7_2:78858705-78858724 Msa1079620:intron 50.0%
CTTATCCCACAAAGTGGGGT+AGG - chr7_2:78858713-78858732 None:intergenic 50.0%
CTACCCCACTTTGTGGGATA+AGG + chr7_2:78858711-78858730 Msa1079620:intron 50.0%
! CGAAGCCTTATCCCACAAAG+TGG - chr7_2:78858719-78858738 None:intergenic 50.0%
GAGCTTAAGCTCACCAGAGA+TGG + chr7_2:78859833-78859852 Msa1079620:intron 50.0%
! CTATACTCTCCTTGGCCTTC+TGG + chr7_2:78860098-78860117 Msa1079620:intron 50.0%
GATCTGAACATCGACCCAGA+AGG - chr7_2:78860116-78860135 None:intergenic 50.0%
!! TCCAGATCAGGTTGGCCTAA+TGG + chr7_2:78860213-78860232 Msa1079620:intron 50.0%
TCCATTAGGCCAACCTGATC+TGG - chr7_2:78860217-78860236 None:intergenic 50.0%
GACTTGACCTCACTCTATGG+AGG - chr7_2:78860360-78860379 None:intergenic 50.0%
CCAGACTTGACCTCACTCTA+TGG - chr7_2:78860363-78860382 None:intergenic 50.0%
CCATAGAGTGAGGTCAAGTC+TGG + chr7_2:78860360-78860379 Msa1079620:intron 50.0%
AGAGGCTAAAGCCAAAGAGG+TGG + chr7_2:78860793-78860812 Msa1079620:CDS 50.0%
TTGGAAGAGACTGGCAGATG+CGG + chr7_2:78860835-78860854 Msa1079620:CDS 50.0%
!! GGATCGGAGTGGTGGATGAT+CGG - chr7_2:78854240-78854259 None:intergenic 55.0%
TAAACGACGGTGGATCGGAG+TGG - chr7_2:78854251-78854270 None:intergenic 55.0%
AGCTAACGACGTCGCATCTC+AGG - chr7_2:78854275-78854294 None:intergenic 55.0%
GAATCAACGGTGGTGTTCGC+CGG - chr7_2:78854389-78854408 None:intergenic 55.0%
!! CACCACCGTTGATTCATCGG+CGG + chr7_2:78854394-78854413 Msa1079620:CDS 55.0%
GACGACCGCCGATGAATCAA+CGG - chr7_2:78854402-78854421 None:intergenic 55.0%
AGCGCTTCGATTGTTCCCGA+CGG - chr7_2:78854434-78854453 None:intergenic 55.0%
TCCATTGTTCCGCGACGTAC+CGG + chr7_2:78854454-78854473 Msa1079620:CDS 55.0%
AAACACGGCTCCTCCTCTTC+CGG - chr7_2:78854737-78854756 None:intergenic 55.0%
TGGGTTTGCGTTGCCGATGA+AGG + chr7_2:78855075-78855094 Msa1079620:CDS 55.0%
TGCGGAGTTCCAACGCTGTA+TGG + chr7_2:78855327-78855346 Msa1079620:CDS 55.0%
CAATCACTTGGGCCATGCCT+TGG + chr7_2:78857918-78857937 Msa1079620:intron 55.0%
ATCACTTGGGCCATGCCTTG+GGG + chr7_2:78857920-78857939 Msa1079620:intron 55.0%
GCGACGGAAGAGTCACATAC+AGG - chr7_2:78859144-78859163 None:intergenic 55.0%
AACATCGACCCAGAAGGCCA+AGG - chr7_2:78860110-78860129 None:intergenic 55.0%
CAGCTGGGTTCCAATGACTC+TGG - chr7_2:78860685-78860704 None:intergenic 55.0%
CCAAAGAGGTGGAAGAGCTG+CGG + chr7_2:78860804-78860823 Msa1079620:CDS 55.0%
CAAAGAGGTGGAAGAGCTGC+GGG + chr7_2:78860805-78860824 Msa1079620:CDS 55.0%
CAGATGCGGCTGCACAGAAT+GGG + chr7_2:78860849-78860868 Msa1079620:CDS 55.0%
! AACCGACGGATTCGGTCCAC+CGG + chr7_2:78854367-78854386 Msa1079620:CDS 60.0%
GACCGCCGATGAATCAACGG+TGG - chr7_2:78854399-78854418 None:intergenic 60.0%
GGTCGTCATACCACCACCGT+CGG + chr7_2:78854415-78854434 Msa1079620:CDS 60.0%
GTCGTCATACCACCACCGTC+GGG + chr7_2:78854416-78854435 Msa1079620:CDS 60.0%
TCGATTGTTCCCGACGGTGG+TGG - chr7_2:78854428-78854447 None:intergenic 60.0%
GCTTCGATTGTTCCCGACGG+TGG - chr7_2:78854431-78854450 None:intergenic 60.0%
ACCGGTACGTCGCGGAACAA+TGG - chr7_2:78854458-78854477 None:intergenic 60.0%
TCTCGGAAACCGGTACGTCG+CGG - chr7_2:78854466-78854485 None:intergenic 60.0%
GATACGCCGGTGGAAGACAC+CGG - chr7_2:78854685-78854704 None:intergenic 60.0%
TGGACAAGATGCCGCGGATC+CGG + chr7_2:78854715-78854734 Msa1079620:CDS 60.0%
GGAAGAGGAGGAGCCGTGTT+TGG + chr7_2:78854736-78854755 Msa1079620:CDS 60.0%
AGCTGCAAATGTGGCCACGC+AGG - chr7_2:78854764-78854783 None:intergenic 60.0%
!! GGAACTGGAGGAAGTGCTGG+AGG + chr7_2:78855294-78855313 Msa1079620:CDS 60.0%
GCGTTGGAACTCCGCAGCTT+GGG - chr7_2:78855323-78855342 None:intergenic 60.0%
! AGCGTTGGAACTCCGCAGCT+TGG - chr7_2:78855324-78855343 None:intergenic 60.0%
GGGTTACTGCACGTGCCTTG+TGG + chr7_2:78856243-78856262 Msa1079620:intron 60.0%
CCGCAGCTCTTCCACCTCTT+TGG - chr7_2:78860807-78860826 None:intergenic 60.0%
GCAGATGCGGCTGCACAGAA+TGG + chr7_2:78860848-78860867 Msa1079620:CDS 60.0%
ACGACGGTGGATCGGAGTGG+TGG - chr7_2:78854248-78854267 None:intergenic 65.0%
TCAACGGTGGTGTTCGCCGG+TGG - chr7_2:78854386-78854405 None:intergenic 65.0%
AGATGCCGCGGATCCGGAAG+AGG + chr7_2:78854721-78854740 Msa1079620:CDS 65.0%
CTCCTCCTCTTCCGGATCCG+CGG - chr7_2:78854729-78854748 None:intergenic 65.0%
! AGCCGTGTTTGGAGCCTGCG+TGG + chr7_2:78854747-78854766 Msa1079620:CDS 65.0%
GGCCACGCAGGCTCCAAACA+CGG - chr7_2:78854752-78854771 None:intergenic 65.0%
! CGGGGAACTGGAGGAAGTGC+TGG + chr7_2:78855291-78855310 Msa1079620:CDS 65.0%
GCTGGAGGCTACCCAAGCTG+CGG + chr7_2:78855309-78855328 Msa1079620:CDS 65.0%
GGGTGAGAGTCCCCAAGGCA+TGG - chr7_2:78857933-78857952 None:intergenic 65.0%
GCAAGGGGTGAGAGTCCCCA+AGG - chr7_2:78857938-78857957 None:intergenic 65.0%
TGCGGCTGCACAGAATGGGC+CGG + chr7_2:78860853-78860872 Msa1079620:CDS 65.0%
CGCCGGTGGACCGAATCCGT+CGG - chr7_2:78854372-78854391 None:intergenic 70.0%
TGCCGCGGATCCGGAAGAGG+AGG + chr7_2:78854724-78854743 Msa1079620:CDS 70.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 78854129 78861304 78854129 ID=Msa1079620;Name=Msa1079620
chr7_2 mRNA 78854129 78861304 78854129 ID=Msa1079620-mRNA-1;Parent=Msa1079620;Name=Msa1079620-mRNA-1;_AED=0.02;_eAED=0.02;_QI=185|1|1|1|1|1|2|412|468
chr7_2 exon 78854129 78855399 78854129 ID=Msa1079620-mRNA-1:exon:19645;Parent=Msa1079620-mRNA-1
chr7_2 exon 78860572 78861304 78860572 ID=Msa1079620-mRNA-1:exon:19646;Parent=Msa1079620-mRNA-1
chr7_2 five_prime_UTR 78854129 78854313 78854129 ID=Msa1079620-mRNA-1:five_prime_utr;Parent=Msa1079620-mRNA-1
chr7_2 CDS 78854314 78855399 78854314 ID=Msa1079620-mRNA-1:cds;Parent=Msa1079620-mRNA-1
chr7_2 CDS 78860572 78860892 78860572 ID=Msa1079620-mRNA-1:cds;Parent=Msa1079620-mRNA-1
chr7_2 three_prime_UTR 78860893 78861304 78860893 ID=Msa1079620-mRNA-1:three_prime_utr;Parent=Msa1079620-mRNA-1
Gene Sequence

>Msa1079620

ATGTTCAAGAAATTAATGAAAGGAGGGCAAAAGAAGCCCTCCAAATCCGATTCAACCGACGGATTCGGTCCACCGGCGAACACCACCGTTGATTCATCGGCGGTCGTCATACCACCACCGTCGGGAACAATCGAAGCGCTTCCATTGTTCCGCGACGTACCGGTTTCCGAGAGACAGAATTTGTTTCTCCGGAAGCTTCAGATTTGTTGCCACACTTTAGATTTCACCGATACGTTGAAATCGGTTCGAGAAAAAGAAATCAAGAGACAAACGTTGATGGAATTGGTTGAATTTATTCAATCTGGTTCGAGTAAGATAACGGAGATTTGTCAAGAAGAGATGATCAAAATGGTTTCGGTCAATATTTTCCGGTGTCTTCCACCGGCGTATCATGAGAATACTGGACAAGATGCCGCGGATCCGGAAGAGGAGGAGCCGTGTTTGGAGCCTGCGTGGCCACATTTGCAGCTTGTTTATGAGCTTCTGCTTAGATATGTGGTTTCATCTGATACTGATACGAAGGTAGCAAAACGTTACATTGATCATTCATTTGTGCTTAAATTGCTTGATTTGTTTGATTCTGAGGATCCTAGAGAGCGCGAATATGTGAAAACGATATTGCATCGTGTTTATGGAAAATTTATGGTTCATAGACCCTTTATTAGAAAGGCTATTAATAACATATTTTATCGGTTTATTTATGAGACTGAGAGACACAGTGGGATTATGGAGCTTCTTGAGATTCTTGGGAGTATAATTAATGGGTTTGCGTTGCCGATGAAGGAAGAGCATAAGTTGTTTCTTGTGCGAGCGTTGTTGCCTTTGCATAAACCTAAACCGGTTGCTGTGTACCATCAGCAGTTGTCTTACTGCATTTCACAGTTTGTTGAGAAGGATTTTAAGCTAGCGGATACTGTTATTCGGGGTTTGTTGAAGTACTGGCCGGTAACTAATTGTCAGAAGGAAGTTCTTTTTCTCGGGGAACTGGAGGAAGTGCTGGAGGCTACCCAAGCTGCGGAGTTCCAACGCTGTATGGTTCTTCTTTTTAGACAGATTGCTCGCTGCCTCAATAGTCCGCATTTTCAGGTCGCAGAACGAGCTCTCTTTTTGTGGAATAACGAGCACATCGTCAGTTTAATTGCCCAAAACAGGACTGTCGTATTGCCCATAATATTCGAAGCATTGGAGAAAAATGTCCAGAGTCATTGGAACCCAGCTGTAAATGGGTTGACTGTGAATGTTAGGAAAATGTTCCTTGAAATGGATGCTGAATTGTTTGAAGAGTGCCAGAGGCAATATTTGGAAAGAGAGGCTAAAGCCAAAGAGGTGGAAGAGCTGCGGGAATTGAATTGGAAGAGACTGGCAGATGCGGCTGCACAGAATGGGCCGGATATGATCACAGCTTAG
Protein sequence

>Msa1079620

MFKKLMKGGQKKPSKSDSTDGFGPPANTTVDSSAVVIPPPSGTIEALPLFRDVPVSERQNLFLRKLQICCHTLDFTDTLKSVREKEIKRQTLMELVEFIQSGSSKITEICQEEMIKMVSVNIFRCLPPAYHENTGQDAADPEEEEPCLEPAWPHLQLVYELLLRYVVSSDTDTKVAKRYIDHSFVLKLLDLFDSEDPREREYVKTILHRVYGKFMVHRPFIRKAINNIFYRFIYETERHSGIMELLEILGSIINGFALPMKEEHKLFLVRALLPLHKPKPVAVYHQQLSYCISQFVEKDFKLADTVIRGLLKYWPVTNCQKEVLFLGELEEVLEATQAAEFQRCMVLLFRQIARCLNSPHFQVAERALFLWNNEHIVSLIAQNRTVVLPIIFEALEKNVQSHWNPAVNGLTVNVRKMFLEMDAELFEECQRQYLEREAKAKEVEELRELNWKRLADAAAQNGPDMITA*