Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1422910 | sp|Q8W4Y5|ASCL_SOLLC | 82.492 | 297 | 50 | 1 | 10 | 306 | 9 | 303 | 0.0 | 509 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1422910 | A0A072TS20 | 98.693 | 306 | 4 | 0 | 1 | 306 | 1 | 306 | 0.0 | 618 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002680 | Msa1422910 | 0.802624 | 5.135486e-49 | -8.615850e-47 |
| Msa0027320 | Msa1422910 | 0.805207 | 1.491989e-49 | -8.615850e-47 |
| Msa0030280 | Msa1422910 | 0.824764 | 6.762900e-54 | -8.615850e-47 |
| Msa0032320 | Msa1422910 | 0.805253 | 1.459726e-49 | -8.615850e-47 |
| Msa0039250 | Msa1422910 | 0.819303 | 1.246457e-52 | -8.615850e-47 |
| Msa0043730 | Msa1422910 | 0.800774 | 1.230838e-48 | -8.615850e-47 |
| Msa0052870 | Msa1422910 | 0.823407 | 1.408583e-53 | -8.615850e-47 |
| Msa0055070 | Msa1422910 | 0.804978 | 1.666195e-49 | -8.615850e-47 |
| Msa0056450 | Msa1422910 | 0.801552 | 8.530730e-49 | -8.615850e-47 |
| Msa0057590 | Msa1422910 | 0.808232 | 3.426701e-50 | -8.615850e-47 |
| Msa0072170 | Msa1422910 | 0.809633 | 1.718168e-50 | -8.615850e-47 |
| Msa0077450 | Msa1422910 | 0.812569 | 3.969257e-51 | -8.615850e-47 |
| Msa0077880 | Msa1422910 | 0.823958 | 1.046355e-53 | -8.615850e-47 |
| Msa0097950 | Msa1422910 | 0.813362 | 2.659472e-51 | -8.615850e-47 |
| Msa0100800 | Msa1422910 | 0.822870 | 1.879335e-53 | -8.615850e-47 |
| Msa0101880 | Msa1422910 | 0.834306 | 3.235094e-56 | -8.615850e-47 |
| Msa0108390 | Msa1422910 | 0.802749 | 4.840085e-49 | -8.615850e-47 |
| Msa0108870 | Msa1422910 | 0.823375 | 1.432854e-53 | -8.615850e-47 |
| Msa0116790 | Msa1422910 | 0.827087 | 1.899021e-54 | -8.615850e-47 |
| Msa0118000 | Msa1422910 | 0.827838 | 1.254007e-54 | -8.615850e-47 |
| Msa0119320 | Msa1422910 | 0.840133 | 1.044403e-57 | -8.615850e-47 |
| Msa0120540 | Msa1422910 | 0.807466 | 4.987023e-50 | -8.615850e-47 |
| Msa1363700 | Msa1422910 | 0.830760 | 2.448626e-55 | -8.615850e-47 |
| Msa1366300 | Msa1422910 | 0.822404 | 2.412304e-53 | -8.615850e-47 |
| Msa1390230 | Msa1422910 | 0.811748 | 5.994180e-51 | -8.615850e-47 |
| Msa1420250 | Msa1422910 | 0.813406 | 2.600813e-51 | -8.615850e-47 |
| Msa1422910 | Msa1433220 | 0.832262 | 1.045227e-55 | -8.615850e-47 |
| Msa1422910 | Msa1449910 | 0.811633 | 6.348529e-51 | -8.615850e-47 |
| Msa1422910 | Msa1464290 | 0.810201 | 1.296610e-50 | -8.615850e-47 |
| Msa0606810 | Msa1422910 | 0.803560 | 3.289386e-49 | -8.615850e-47 |
| Msa0619180 | Msa1422910 | 0.807196 | 5.688198e-50 | -8.615850e-47 |
| Msa0621650 | Msa1422910 | 0.803505 | 3.376972e-49 | -8.615850e-47 |
| Msa0640500 | Msa1422910 | 0.818497 | 1.901120e-52 | -8.615850e-47 |
| Msa0652760 | Msa1422910 | 0.804897 | 1.732950e-49 | -8.615850e-47 |
| Msa0664760 | Msa1422910 | 0.806610 | 7.566158e-50 | -8.615850e-47 |
| Msa0679100 | Msa1422910 | 0.807638 | 4.584237e-50 | -8.615850e-47 |
| Msa0689760 | Msa1422910 | 0.812963 | 3.253929e-51 | -8.615850e-47 |
| Msa0691050 | Msa1422910 | 0.810673 | 1.025277e-50 | -8.615850e-47 |
| Msa0716860 | Msa1422910 | 0.814966 | 1.177148e-51 | -8.615850e-47 |
| Msa0744090 | Msa1422910 | 0.803693 | 3.085600e-49 | -8.615850e-47 |
| Msa0744100 | Msa1422910 | 0.806251 | 9.005321e-50 | -8.615850e-47 |
| Msa0750250 | Msa1422910 | 0.809414 | 1.914401e-50 | -8.615850e-47 |
| Msa0757800 | Msa1422910 | 0.813263 | 2.796721e-51 | -8.615850e-47 |
| Msa0758230 | Msa1422910 | 0.815468 | 9.101665e-52 | -8.615850e-47 |
| Msa0788110 | Msa1422910 | 0.808337 | 3.254413e-50 | -8.615850e-47 |
| Msa0799000 | Msa1422910 | 0.816711 | 4.802999e-52 | -8.615850e-47 |
| Msa0825270 | Msa1422910 | 0.810561 | 1.084096e-50 | -8.615850e-47 |
| Msa0825280 | Msa1422910 | 0.808610 | 2.845431e-50 | -8.615850e-47 |
| Msa0126770 | Msa1422910 | 0.800976 | 1.119562e-48 | -8.615850e-47 |
| Msa0133720 | Msa1422910 | 0.817713 | 2.859547e-52 | -8.615850e-47 |
| Msa0133820 | Msa1422910 | 0.816254 | 6.079072e-52 | -8.615850e-47 |
| Msa0134000 | Msa1422910 | 0.821396 | 4.127790e-53 | -8.615850e-47 |
| Msa0145110 | Msa1422910 | 0.805405 | 1.356257e-49 | -8.615850e-47 |
| Msa0156230 | Msa1422910 | 0.803629 | 3.181766e-49 | -8.615850e-47 |
| Msa0165300 | Msa1422910 | 0.804267 | 2.345354e-49 | -8.615850e-47 |
| Msa0174690 | Msa1422910 | 0.803546 | 3.310623e-49 | -8.615850e-47 |
| Msa0181000 | Msa1422910 | 0.829847 | 4.092753e-55 | -8.615850e-47 |
| Msa0181230 | Msa1422910 | 0.825798 | 3.850660e-54 | -8.615850e-47 |
| Msa0193540 | Msa1422910 | 0.809826 | 1.561841e-50 | -8.615850e-47 |
| Msa0198520 | Msa1422910 | 0.805796 | 1.122573e-49 | -8.615850e-47 |
| Msa0198530 | Msa1422910 | 0.806364 | 8.527642e-50 | -8.615850e-47 |
| Msa0229360 | Msa1422910 | 0.807899 | 4.034701e-50 | -8.615850e-47 |
| Msa0229940 | Msa1422910 | 0.810663 | 1.030432e-50 | -8.615850e-47 |
| Msa0230370 | Msa1422910 | 0.829905 | 3.962689e-55 | -8.615850e-47 |
| Msa0238230 | Msa1422910 | 0.808716 | 2.701331e-50 | -8.615850e-47 |
| Msa1252850 | Msa1422910 | -0.806526 | 7.881657e-50 | -8.615850e-47 |
| Msa1262960 | Msa1422910 | 0.809497 | 1.837673e-50 | -8.615850e-47 |
| Msa1279140 | Msa1422910 | -0.803404 | 3.543318e-49 | -8.615850e-47 |
| Msa1280620 | Msa1422910 | 0.823615 | 1.258912e-53 | -8.615850e-47 |
| Msa1286550 | Msa1422910 | 0.814813 | 1.272399e-51 | -8.615850e-47 |
| Msa1293070 | Msa1422910 | 0.848913 | 4.526138e-60 | -8.615850e-47 |
| Msa1294960 | Msa1422910 | 0.825826 | 3.793729e-54 | -8.615850e-47 |
| Msa1302060 | Msa1422910 | 0.805201 | 1.496513e-49 | -8.615850e-47 |
| Msa1320820 | Msa1422910 | 0.801248 | 9.849555e-49 | -8.615850e-47 |
| Msa1330890 | Msa1422910 | -0.803991 | 2.676688e-49 | -8.615850e-47 |
| Msa1333970 | Msa1422910 | 0.832334 | 1.003321e-55 | -8.615850e-47 |
| Msa1338830 | Msa1422910 | 0.808961 | 2.394919e-50 | -8.615850e-47 |
| Msa0384670 | Msa1422910 | 0.805500 | 1.295797e-49 | -8.615850e-47 |
| Msa0392200 | Msa1422910 | 0.825006 | 5.930342e-54 | -8.615850e-47 |
| Msa0394690 | Msa1422910 | 0.801200 | 1.007418e-48 | -8.615850e-47 |
| Msa0403660 | Msa1422910 | 0.800901 | 1.159387e-48 | -8.615850e-47 |
| Msa0410300 | Msa1422910 | 0.803168 | 3.965162e-49 | -8.615850e-47 |
| Msa0411410 | Msa1422910 | 0.811044 | 8.525062e-51 | -8.615850e-47 |
| Msa0420590 | Msa1422910 | -0.809875 | 1.524295e-50 | -8.615850e-47 |
| Msa0420650 | Msa1422910 | -0.802457 | 5.560542e-49 | -8.615850e-47 |
| Msa0431770 | Msa1422910 | 0.808115 | 3.629037e-50 | -8.615850e-47 |
| Msa0434570 | Msa1422910 | 0.804035 | 2.620789e-49 | -8.615850e-47 |
| Msa0434770 | Msa1422910 | 0.801434 | 9.020881e-49 | -8.615850e-47 |
| Msa0437510 | Msa1422910 | 0.808225 | 3.439258e-50 | -8.615850e-47 |
| Msa0461590 | Msa1422910 | 0.820904 | 5.359847e-53 | -8.615850e-47 |
| Msa0465920 | Msa1422910 | 0.808238 | 3.417253e-50 | -8.615850e-47 |
| Msa0465960 | Msa1422910 | 0.821343 | 4.245965e-53 | -8.615850e-47 |
| Msa0474700 | Msa1422910 | 0.804426 | 2.172131e-49 | -8.615850e-47 |
| Msa0981430 | Msa1422910 | 0.803973 | 2.699376e-49 | -8.615850e-47 |
| Msa1004420 | Msa1422910 | 0.809867 | 1.530632e-50 | -8.615850e-47 |
| Msa1021510 | Msa1422910 | 0.803738 | 3.021271e-49 | -8.615850e-47 |
| Msa1033660 | Msa1422910 | 0.815442 | 9.227714e-52 | -8.615850e-47 |
| Msa1050700 | Msa1422910 | 0.828504 | 8.664846e-55 | -8.615850e-47 |
| Msa1073490 | Msa1422910 | 0.811935 | 5.457595e-51 | -8.615850e-47 |
| Msa1079620 | Msa1422910 | 0.810857 | 9.355436e-51 | -8.615850e-47 |
| Msa0244380 | Msa1422910 | 0.807750 | 4.339165e-50 | -8.615850e-47 |
| Msa0252240 | Msa1422910 | 0.812232 | 4.702530e-51 | -8.615850e-47 |
| Msa0274630 | Msa1422910 | 0.806258 | 8.977856e-50 | -8.615850e-47 |
| Msa0277420 | Msa1422910 | 0.809789 | 1.590351e-50 | -8.615850e-47 |
| Msa0307570 | Msa1422910 | 0.823065 | 1.692523e-53 | -8.615850e-47 |
| Msa0312530 | Msa1422910 | 0.819542 | 1.099596e-52 | -8.615850e-47 |
| Msa0317270 | Msa1422910 | 0.801202 | 1.006224e-48 | -8.615850e-47 |
| Msa0318720 | Msa1422910 | 0.822868 | 1.881124e-53 | -8.615850e-47 |
| Msa0340690 | Msa1422910 | 0.803213 | 3.880802e-49 | -8.615850e-47 |
| Msa0346990 | Msa1422910 | 0.830453 | 2.912350e-55 | -8.615850e-47 |
| Msa0363810 | Msa1422910 | 0.800969 | 1.122884e-48 | -8.615850e-47 |
| Msa1158660 | Msa1422910 | 0.800258 | 1.568338e-48 | -8.615850e-47 |
| Msa1160310 | Msa1422910 | 0.815573 | 8.627286e-52 | -8.615850e-47 |
| Msa1172130 | Msa1422910 | -0.812297 | 4.551415e-51 | -8.615850e-47 |
| Msa1181170 | Msa1422910 | -0.812258 | 4.641612e-51 | -8.615850e-47 |
| Msa1198880 | Msa1422910 | 0.973862 | 3.743492e-137 | -8.615850e-47 |
| Msa1205850 | Msa1422910 | 0.804492 | 2.104909e-49 | -8.615850e-47 |
| Msa1223330 | Msa1422910 | 0.851992 | 6.180816e-61 | -8.615850e-47 |
| Msa0487780 | Msa1422910 | 0.806940 | 6.444178e-50 | -8.615850e-47 |
| Msa0554380 | Msa1422910 | -0.808273 | 3.358664e-50 | -8.615850e-47 |
| Msa0556010 | Msa1422910 | 0.815729 | 7.963763e-52 | -8.615850e-47 |
| Msa0573040 | Msa1422910 | 0.810527 | 1.102590e-50 | -8.615850e-47 |
| Msa0578090 | Msa1422910 | 0.819448 | 1.155268e-52 | -8.615850e-47 |
| Msa0581690 | Msa1422910 | 0.839400 | 1.620617e-57 | -8.615850e-47 |
| Msa0584550 | Msa1422910 | 0.801215 | 1.000396e-48 | -8.615850e-47 |
| Msa0586850 | Msa1422910 | 0.801769 | 7.701531e-49 | -8.615850e-47 |
| Msa0850710 | Msa1422910 | 0.804669 | 1.933030e-49 | -8.615850e-47 |
| Msa0851470 | Msa1422910 | 0.805817 | 1.111506e-49 | -8.615850e-47 |
| Msa0861830 | Msa1422910 | 0.809185 | 2.144270e-50 | -8.615850e-47 |
| Msa0929950 | Msa1422910 | 0.806780 | 6.964680e-50 | -8.615850e-47 |
| Msa0947530 | Msa1422910 | -0.824034 | 1.004500e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1422910 | MtrunA17_Chr8g0368531 | 98.693 | 306 | 4 | 0 | 1 | 306 | 1 | 306 | 0.0 | 618 |
| Msa1422910 | MtrunA17_Chr5g0421391 | 72.391 | 297 | 82 | 0 | 1 | 297 | 1 | 297 | 4.39e-165 | 461 |
| Msa1422910 | MtrunA17_Chr5g0421381 | 74.747 | 297 | 75 | 0 | 1 | 297 | 1 | 297 | 2.22e-160 | 449 |
| Msa1422910 | MtrunA17_Chr4g0044861 | 42.434 | 304 | 159 | 5 | 1 | 303 | 4 | 292 | 5.44e-78 | 239 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1422910 | AT1G13580.2 | 76.299 | 308 | 71 | 1 | 1 | 306 | 1 | 308 | 2.83e-179 | 497 |
| Msa1422910 | AT1G13580.3 | 76.299 | 308 | 71 | 1 | 1 | 306 | 1 | 308 | 2.83e-179 | 497 |
| Msa1422910 | AT3G25540.1 | 69.453 | 311 | 89 | 3 | 1 | 306 | 1 | 310 | 9.11e-164 | 458 |
| Msa1422910 | AT3G25540.3 | 69.453 | 311 | 89 | 3 | 1 | 306 | 1 | 310 | 9.11e-164 | 458 |
| Msa1422910 | AT1G26200.1 | 60.458 | 306 | 108 | 5 | 11 | 306 | 10 | 312 | 3.20e-132 | 378 |
| Msa1422910 | AT1G13580.1 | 73.529 | 238 | 63 | 0 | 1 | 238 | 1 | 238 | 5.76e-132 | 375 |
| Msa1422910 | AT1G26200.3 | 57.413 | 317 | 111 | 5 | 11 | 306 | 10 | 323 | 6.12e-130 | 373 |
| Msa1422910 | AT3G25540.2 | 67.220 | 241 | 76 | 1 | 1 | 238 | 1 | 241 | 1.56e-122 | 351 |
| Msa1422910 | AT1G26200.2 | 62.719 | 228 | 82 | 1 | 11 | 238 | 10 | 234 | 4.67e-102 | 299 |
| Msa1422910 | AT3G19260.1 | 46.290 | 283 | 144 | 3 | 23 | 305 | 22 | 296 | 7.82e-84 | 254 |
Find 86 sgRNAs with CRISPR-Local
Find 410 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAGAGGATTAATAAATTTA+AGG | 0.158034 | tig0025492:+48180 | Msa1422910:CDS |
| TTTCAAATGTTCATTCAAAT+TGG | 0.216262 | tig0025492:+53069 | Msa1422910:three_prime_UTR |
| AAACAAGGCGCTCGGACTTT+GGG | 0.247453 | tig0025492:+48565 | Msa1422910:CDS |
| TTATCCTTTGGTTTCCATAT+TGG | 0.260941 | tig0025492:+53353 | Msa1422910:three_prime_UTR |
| GAAAAGCACAATAACCAAAA+AGG | 0.261122 | tig0025492:+46726 | Msa1422910:five_prime_UTR |
| ACTACCCATTCTGGATTCTT+TGG | 0.271963 | tig0025492:+49711 | Msa1422910:CDS |
| GTGGCAAGAAGATTGATATT+TGG | 0.276513 | tig0025492:+48115 | Msa1422910:CDS |
| AGACTACGGAGCTGATTTAA+AGG | 0.276937 | tig0025492:+53127 | Msa1422910:three_prime_UTR |
| TGCTGGTTATGCATATTTAT+TGG | 0.281158 | tig0025492:+51529 | Msa1422910:CDS |
| TTTGAATGAACATTTGAAAA+TGG | 0.281985 | tig0025492:-53065 | None:intergenic |
| TTAAACTTAATGTTGACTTT+AGG | 0.305486 | tig0025492:+53421 | Msa1422910:three_prime_UTR |
| GAAACAAGGCGCTCGGACTT+TGG | 0.310182 | tig0025492:+48564 | Msa1422910:CDS |
| AGGAGGGAATTGTATTTATA+CGG | 0.319237 | tig0025492:+53092 | Msa1422910:three_prime_UTR |
| GTCAAACCATTATAACAAAA+TGG | 0.320408 | tig0025492:-53226 | None:intergenic |
| ATTGGTGGGTATTGATATAT+CGG | 0.324868 | tig0025492:+51547 | Msa1422910:CDS |
| TTTATTTCTTGCAGATGAAT+TGG | 0.335583 | tig0025492:+53002 | Msa1422910:intron |
| ATGTTTCTGTCCTGTTTATT+CGG | 0.352377 | tig0025492:-46789 | None:intergenic |
| GCCTCATTTACTACCCATTC+TGG | 0.356006 | tig0025492:+49702 | Msa1422910:CDS |
| TGGGACCGGGGAGTCAGGTC+TGG | 0.380741 | tig0025492:+48302 | Msa1422910:CDS |
| TTGAATATATAATAATATAT+TGG | 0.382708 | tig0025492:-51489 | None:intergenic |
| CTTGCACAAATATTATCCTT+TGG | 0.386600 | tig0025492:+53341 | Msa1422910:three_prime_UTR |
| CAGTCCTTCAAACTTGTACT+TGG | 0.398949 | tig0025492:-53296 | None:intergenic |
| TTGGGTGGGACCGGGGAGTC+AGG | 0.401271 | tig0025492:+48297 | Msa1422910:CDS |
| TAGTCTTCTATACTGCTTGC+TGG | 0.411601 | tig0025492:+51512 | Msa1422910:CDS |
| TCTGGATTCTTTGGAGTACA+AGG | 0.424637 | tig0025492:+49720 | Msa1422910:CDS |
| TCTTTCTAATTTATCAAAGA+AGG | 0.426843 | tig0025492:+53456 | Msa1422910:three_prime_UTR |
| AGTGACGTGTTTCTCGAGAT+AGG | 0.438572 | tig0025492:+49599 | Msa1422910:CDS |
| AGGTAGAAATCTTGATAGAC+AGG | 0.444183 | tig0025492:-46964 | None:intergenic |
| TATGCAGCACCACAACGTTC+AGG | 0.447965 | tig0025492:+53192 | Msa1422910:three_prime_UTR |
| GGGAAGAAGAGAGCGAAGAA+AGG | 0.452562 | tig0025492:-46991 | None:intergenic |
| TCTTGATAGATTCCTCTTCG+AGG | 0.458200 | tig0025492:+47029 | Msa1422910:CDS |
| CAAATGTTCATTCAAATTGG+AGG | 0.458402 | tig0025492:+53072 | Msa1422910:three_prime_UTR |
| AGTTCTGCTCACCTTGGATA+AGG | 0.458502 | tig0025492:+51446 | Msa1422910:CDS |
| GATAGACAGGGTAAGATTCA+TGG | 0.460722 | tig0025492:-46951 | None:intergenic |
| GACTACGGAGCTGATTTAAA+GGG | 0.468083 | tig0025492:+53128 | Msa1422910:three_prime_UTR |
| GATAGATCGTTGAAAAGAAT+AGG | 0.473909 | tig0025492:-46817 | None:intergenic |
| AGAGAGCGAAGAAAGGAAGA+AGG | 0.475439 | tig0025492:-46984 | None:intergenic |
| ACAGTCTATATGTATACTGC+TGG | 0.476562 | tig0025492:+48504 | Msa1422910:CDS |
| CTTAGTGAAGACGTTCGATC+TGG | 0.481179 | tig0025492:+51603 | Msa1422910:CDS |
| AGAAGATTGATATTTGGAAA+GGG | 0.489208 | tig0025492:+48121 | Msa1422910:CDS |
| AATGAATGATGAGGCCTTGA+GGG | 0.494320 | tig0025492:-53265 | None:intergenic |
| ACATTCAGGTTTGCTCGTGT+TGG | 0.494874 | tig0025492:+49548 | Msa1422910:intron |
| AGATTCATGGTGAAAGTCAA+TGG | 0.504496 | tig0025492:-46938 | None:intergenic |
| TACTCCAAAGAATCCAGAAT+GGG | 0.506344 | tig0025492:-49715 | None:intergenic |
| TGGTTATGCATATTTATTGG+TGG | 0.509703 | tig0025492:+51532 | Msa1422910:CDS |
| GAAGATTGATATTTGGAAAG+GGG | 0.512206 | tig0025492:+48122 | Msa1422910:CDS |
| AAGAAGATTGATATTTGGAA+AGG | 0.512348 | tig0025492:+48120 | Msa1422910:CDS |
| AACAAGGCGCTCGGACTTTG+GGG | 0.522305 | tig0025492:+48566 | Msa1422910:CDS |
| CTGTAACTTATGATGAACCT+TGG | 0.527721 | tig0025492:+48254 | Msa1422910:CDS |
| TCTGGCCAGACCTGACTCCC+CGG | 0.529833 | tig0025492:-48307 | None:intergenic |
| GGTTATGCATATTTATTGGT+GGG | 0.532419 | tig0025492:+51533 | Msa1422910:CDS |
| ATGTTCATTCAAATTGGAGG+AGG | 0.535128 | tig0025492:+53075 | Msa1422910:three_prime_UTR |
| ATAAATTTAAGGAATCAGCT+TGG | 0.539246 | tig0025492:+48191 | Msa1422910:CDS |
| AAACAGATGATAGAAGAAAG+AGG | 0.541052 | tig0025492:+48164 | Msa1422910:CDS |
| TCAAGAAGGAAGCGAATGGA+AGG | 0.543777 | tig0025492:-47012 | None:intergenic |
| TTAATAAATAATCATTACCA+TGG | 0.549904 | tig0025492:+46894 | Msa1422910:exon |
| TCCAGAATGGGTAGTAAATG+AGG | 0.553980 | tig0025492:-49703 | None:intergenic |
| GAAAGTCAATGGAATTGAAT+CGG | 0.557881 | tig0025492:-46927 | None:intergenic |
| AATATATTGGACCTTCCACT+TGG | 0.560357 | tig0025492:-51476 | None:intergenic |
| CTATGAAGTTCTGCTCACCT+TGG | 0.565640 | tig0025492:+51440 | Msa1422910:CDS |
| GTGACGTGTTTCTCGAGATA+GGG | 0.570096 | tig0025492:+49600 | Msa1422910:CDS |
| GTTAAACAAATCCAAGCAAG+AGG | 0.572899 | tig0025492:+51576 | Msa1422910:CDS |
| GTACTCCAAAGAATCCAGAA+TGG | 0.588468 | tig0025492:-49716 | None:intergenic |
| TGTTCATTCAAATTGGAGGA+GGG | 0.588650 | tig0025492:+53076 | Msa1422910:three_prime_UTR |
| GAAAATTTGAATGAATGATG+AGG | 0.591960 | tig0025492:-53274 | None:intergenic |
| AAGGAAAAGCACCAAGTGGA+AGG | 0.594350 | tig0025492:+51465 | Msa1422910:CDS |
| TATTTATTATCTTTCAGCTG+AGG | 0.594701 | tig0025492:+48219 | Msa1422910:CDS |
| GAATCGGTGAATGAAATCCA+TGG | 0.601822 | tig0025492:-46911 | None:intergenic |
| CGAAGAGGAATCTATCAAGA+AGG | 0.602895 | tig0025492:-47026 | None:intergenic |
| ATTATATAATCACAATGCAA+AGG | 0.607238 | tig0025492:+52172 | Msa1422910:three_prime_UTR |
| TCTATCAAGAAGGAAGCGAA+TGG | 0.607360 | tig0025492:-47016 | None:intergenic |
| ATCTCCAATATGGAAACCAA+AGG | 0.608336 | tig0025492:-53357 | None:intergenic |
| TATCTTGTATTGGTAAACCA+AGG | 0.608741 | tig0025492:-48271 | None:intergenic |
| TCTGTCCTGTTTATTCGGTG+TGG | 0.620331 | tig0025492:-46784 | None:intergenic |
| GGGAAAATGTCTAAATACAG+TGG | 0.634966 | tig0025492:+49620 | Msa1422910:CDS |
| CAAGAAGGAAGCGAATGGAA+GGG | 0.641229 | tig0025492:-47011 | None:intergenic |
| GAATGAATGATGAGGCCTTG+AGG | 0.647474 | tig0025492:-53266 | None:intergenic |
| TAGAGTGACTAACCTCGAAG+AGG | 0.658147 | tig0025492:-47041 | None:intergenic |
| TGCAGCAGACCTGAACGTTG+TGG | 0.661782 | tig0025492:-53201 | None:intergenic |
| GGATTCGAGAATATAGACTA+CGG | 0.662829 | tig0025492:+53113 | Msa1422910:three_prime_UTR |
| GGTAGAAATCTTGATAGACA+GGG | 0.682772 | tig0025492:-46963 | None:intergenic |
| ATAATGATATATCAGACCCA+CGG | 0.686660 | tig0025492:+53502 | Msa1422910:three_prime_UTR |
| GGATAAGGAAAAGCACCAAG+TGG | 0.700950 | tig0025492:+51461 | Msa1422910:CDS |
| CAACACAATGAGAATGACAG+TGG | 0.718759 | tig0025492:-48610 | None:intergenic |
| ATGAATGATGAGGCCTTGAG+GGG | 0.719303 | tig0025492:-53264 | None:intergenic |
| CATTTGAAAATGGTTGACAG+TGG | 0.719432 | tig0025492:-53055 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAAAAAATTAATAAAAAA+AGG | - | tig0025492:47091-47110 | None:intergenic | 0.0% |
| !!! | TGATTGATTTAATTTTTTAT+AGG | + | tig0025492:47244-47263 | Msa1422910:intron | 10.0% |
| !!! | ATTTTTTTTTCTTTCAATTT+TGG | + | tig0025492:47977-47996 | Msa1422910:intron | 10.0% |
| !!! | ATATTGAATTGTTAAAATTT+TGG | - | tig0025492:51336-51355 | None:intergenic | 10.0% |
| !!! | TAACTTTTAGTTTATAATAT+CGG | - | tig0025492:52670-52689 | None:intergenic | 10.0% |
| !!! | TTTTAATTTCAAAAAGAAAA+CGG | + | tig0025492:52746-52765 | Msa1422910:intron | 10.0% |
| !! | ATGAATTTAAATTATAACTT+AGG | - | tig0025492:52867-52886 | None:intergenic | 10.0% |
| !! | AATTTAAATTCATGTTTATT+AGG | + | tig0025492:52874-52893 | Msa1422910:intron | 10.0% |
| !! | TTAATAAATAATCATTACCA+TGG | + | tig0025492:46894-46913 | Msa1422910:exon | 15.0% |
| !!! | TTTTGTGTTTTTTTTTATAG+TGG | + | tig0025492:47281-47300 | Msa1422910:intron | 15.0% |
| !!! | ATATATACATATCAGTATTT+TGG | + | tig0025492:47548-47567 | Msa1422910:intron | 15.0% |
| !!! | TAGCTATTTTTTTATAATGT+AGG | + | tig0025492:47629-47648 | Msa1422910:intron | 15.0% |
| !! | AAAGAGGATTAATAAATTTA+AGG | + | tig0025492:48180-48199 | Msa1422910:CDS | 15.0% |
| !!! | CATTTTTGCTTTAATATTTT+GGG | + | tig0025492:48542-48561 | Msa1422910:CDS | 15.0% |
| !!! | TTGTGAAATTTGATTTTTTT+TGG | + | tig0025492:48695-48714 | Msa1422910:intron | 15.0% |
| !! | AGTAGAAATAAAATGTAAAT+TGG | - | tig0025492:49764-49783 | None:intergenic | 15.0% |
| !!! | TATTTACATATTTTTCCAAT+TGG | + | tig0025492:49962-49981 | Msa1422910:intron | 15.0% |
| !! | TGTTATAAAAAAAAGATACT+CGG | + | tig0025492:50215-50234 | Msa1422910:intron | 15.0% |
| !!! | TTCTTTAACTTTTTATGTAA+GGG | - | tig0025492:50697-50716 | None:intergenic | 15.0% |
| !!! | TTTCTTTAACTTTTTATGTA+AGG | - | tig0025492:50698-50717 | None:intergenic | 15.0% |
| !! | AATATAAAAGTAATAATGCA+AGG | - | tig0025492:50759-50778 | None:intergenic | 15.0% |
| !!! | TTTCAAATTTTGAATGTAAA+TGG | + | tig0025492:50820-50839 | Msa1422910:intron | 15.0% |
| !! | TTAACAAGAACAATTAATAA+TGG | - | tig0025492:51059-51078 | None:intergenic | 15.0% |
| !!! | TTTTAACAATTCAATATAAG+TGG | + | tig0025492:51339-51358 | Msa1422910:intron | 15.0% |
| !!! | TGTAAATATTTTAAACTAAG+AGG | + | tig0025492:52033-52052 | Msa1422910:intron | 15.0% |
| !!! | AGTACAAGTTTTATTATTAT+TGG | + | tig0025492:52294-52313 | Msa1422910:intron | 15.0% |
| !!! | GTACAAGTTTTATTATTATT+GGG | + | tig0025492:52295-52314 | Msa1422910:intron | 15.0% |
| !!! | GAATTTATTGAAAACTTTTG+TGG | + | tig0025492:47439-47458 | Msa1422910:intron | 20.0% |
| !!! | TACCTTTTTCTATCATTAAA+AGG | + | tig0025492:47471-47490 | Msa1422910:intron | 20.0% |
| !!! | ACCTTTTTCTATCATTAAAA+GGG | + | tig0025492:47472-47491 | Msa1422910:intron | 20.0% |
| !! | TTAAAACTTTAAGCTACAAA+TGG | - | tig0025492:47664-47683 | None:intergenic | 20.0% |
| !!! | TTACCAATACAAGATATTTT+TGG | + | tig0025492:48278-48297 | Msa1422910:CDS | 20.0% |
| !!! | TACCAATACAAGATATTTTT+GGG | + | tig0025492:48279-48298 | Msa1422910:CDS | 20.0% |
| !! | CCAAAATATTAAAGCAAAAA+TGG | - | tig0025492:48544-48563 | None:intergenic | 20.0% |
| !!! | CCATTTTTGCTTTAATATTT+TGG | + | tig0025492:48541-48560 | Msa1422910:CDS | 20.0% |
| !! | AATTTCACAAGAAAAAAACT+TGG | - | tig0025492:48685-48704 | None:intergenic | 20.0% |
| !!! | TTTCACATTTTTTCTACTAT+AGG | - | tig0025492:49218-49237 | None:intergenic | 20.0% |
| !! | GTAGAAAAAATGTGAAAAAT+AGG | + | tig0025492:49221-49240 | Msa1422910:intron | 20.0% |
| !!! | TCTTTCATTATAGTTTTTCT+AGG | - | tig0025492:49346-49365 | None:intergenic | 20.0% |
| !!! | TTTTCTATGTTAATACATTC+AGG | + | tig0025492:49534-49553 | Msa1422910:intron | 20.0% |
| !!! | CTACTTTCTATTATATTTTC+TGG | + | tig0025492:49779-49798 | Msa1422910:intron | 20.0% |
| !! | TAAGAATTCACATGATAAAT+AGG | - | tig0025492:49811-49830 | None:intergenic | 20.0% |
| !! | TTATCTTGGTCAATAAATAT+AGG | + | tig0025492:49828-49847 | Msa1422910:intron | 20.0% |
| !! | CATTAAGTATATGTATTAAG+AGG | - | tig0025492:49858-49877 | None:intergenic | 20.0% |
| !!! | TCTTTAACTTTTTATGTAAG+GGG | - | tig0025492:50696-50715 | None:intergenic | 20.0% |
| !!! | CAAGTTTTTTTAGAATAAGA+AGG | - | tig0025492:51000-51019 | None:intergenic | 20.0% |
| !!! | TAATAATGGACAGTATAAAA+AGG | - | tig0025492:51045-51064 | None:intergenic | 20.0% |
| !!! | TTGTGTTTAAAATAAGACTT+GGG | - | tig0025492:51290-51309 | None:intergenic | 20.0% |
| !!! | ATTGTGTTTAAAATAAGACT+TGG | - | tig0025492:51291-51310 | None:intergenic | 20.0% |
| !!! | ATTGTTAAAATTTTGGTTGA+CGG | - | tig0025492:51329-51348 | None:intergenic | 20.0% |
| !!! | TTTATTTAAAACACTGCATA+TGG | - | tig0025492:51699-51718 | None:intergenic | 20.0% |
| !! | TAATGAGTGAATTAAACAAA+AGG | - | tig0025492:51854-51873 | None:intergenic | 20.0% |
| !! | TGTTTAATTCACTCATTAAA+CGG | + | tig0025492:51856-51875 | Msa1422910:intron | 20.0% |
| !! | ATTATATAATCACAATGCAA+AGG | + | tig0025492:52172-52191 | Msa1422910:three_prime_UTR | 20.0% |
| !! | GATTATATTCATTATGTCTA+GGG | - | tig0025492:52229-52248 | None:intergenic | 20.0% |
| !! | TGATTATATTCATTATGTCT+AGG | - | tig0025492:52230-52249 | None:intergenic | 20.0% |
| !!! | TTTTGAGAGTATTATAAACA+CGG | + | tig0025492:52492-52511 | Msa1422910:intron | 20.0% |
| !!! | TACTATAAGTATGAGAATTT+TGG | - | tig0025492:52543-52562 | None:intergenic | 20.0% |
| !!! | TTTAGTTTATAATATCGGTA+TGG | - | tig0025492:52665-52684 | None:intergenic | 20.0% |
| !! | TTGAAATCAATTATGCTTAA+TGG | + | tig0025492:52942-52961 | Msa1422910:intron | 20.0% |
| !! | TTTGAATGAACATTTGAAAA+TGG | - | tig0025492:53068-53087 | None:intergenic | 20.0% |
| !! | TTTCAAATGTTCATTCAAAT+TGG | + | tig0025492:53069-53088 | Msa1422910:three_prime_UTR | 20.0% |
| !!! | TAGTAATTTTGTGCAAATTA+AGG | - | tig0025492:53395-53414 | None:intergenic | 20.0% |
| !!! | TTAAACTTAATGTTGACTTT+AGG | + | tig0025492:53421-53440 | Msa1422910:three_prime_UTR | 20.0% |
| !! | TCTTTCTAATTTATCAAAGA+AGG | + | tig0025492:53456-53475 | Msa1422910:three_prime_UTR | 20.0% |
| !! | AAAAGCACAATAACCAAAAA+GGG | + | tig0025492:46727-46746 | Msa1422910:five_prime_UTR | 25.0% |
| ! | ACAAATGACATAACATATGT+TGG | - | tig0025492:47172-47191 | None:intergenic | 25.0% |
| !! | ACCCTTTTAATGATAGAAAA+AGG | - | tig0025492:47476-47495 | None:intergenic | 25.0% |
| ! | AGAACGATAGATACATATAA+AGG | - | tig0025492:47520-47539 | None:intergenic | 25.0% |
| !! | AAATTTTGTGAAGATGTAGA+CGG | - | tig0025492:47606-47625 | None:intergenic | 25.0% |
| ! | TTATTGTGTCTAATAGTCTA+TGG | + | tig0025492:47939-47958 | Msa1422910:intron | 25.0% |
| !! | TTCTTTCAATTTTGGACTTT+TGG | + | tig0025492:47985-48004 | Msa1422910:intron | 25.0% |
| ! | AAGAAGATTGATATTTGGAA+AGG | + | tig0025492:48120-48139 | Msa1422910:CDS | 25.0% |
| ! | AGAAGATTGATATTTGGAAA+GGG | + | tig0025492:48121-48140 | Msa1422910:CDS | 25.0% |
| ! | ATAAATTTAAGGAATCAGCT+TGG | + | tig0025492:48191-48210 | Msa1422910:CDS | 25.0% |
| ! | TATTTATTATCTTTCAGCTG+AGG | + | tig0025492:48219-48238 | Msa1422910:CDS | 25.0% |
| !!! | AATACAAGATATTTTTGGGT+GGG | + | tig0025492:48283-48302 | Msa1422910:CDS | 25.0% |
| !!! | GCTTACTTAATTTTTTGATC+TGG | - | tig0025492:48328-48347 | None:intergenic | 25.0% |
| !!! | CTTTAATATTTTGGGAAACA+AGG | + | tig0025492:48550-48569 | Msa1422910:CDS | 25.0% |
| !! | TTGTGTTGTCTTACATTTTT+AGG | + | tig0025492:48625-48644 | Msa1422910:CDS | 25.0% |
| ! | TTGTAATTGTTTGATATGTC+TGG | + | tig0025492:48728-48747 | Msa1422910:intron | 25.0% |
| ! | CACATTCAACTCTTTAAATA+AGG | - | tig0025492:48773-48792 | None:intergenic | 25.0% |
| ! | AAAATGTGAAAAATAGGCTT+CGG | + | tig0025492:49227-49246 | Msa1422910:intron | 25.0% |
| !! | AGATTTAGAGTTTAATGAGT+TGG | + | tig0025492:49363-49382 | Msa1422910:intron | 25.0% |
| !! | TAATGAGTTGGATCTAAATA+TGG | + | tig0025492:49375-49394 | Msa1422910:intron | 25.0% |
| !! | TTATTCTATTCGTTTTGTCT+TGG | + | tig0025492:49669-49688 | Msa1422910:CDS | 25.0% |
| !! | TATTCTATTCGTTTTGTCTT+GGG | + | tig0025492:49670-49689 | Msa1422910:CDS | 25.0% |
| ! | TATCATGTGAATTCTTATCT+TGG | + | tig0025492:49814-49833 | Msa1422910:intron | 25.0% |
| ! | CATTCTTTCAGAATGTATAA+CGG | - | tig0025492:49897-49916 | None:intergenic | 25.0% |
| ! | TTGAATTTGAAGAGAAACAA+GGG | - | tig0025492:49924-49943 | None:intergenic | 25.0% |
| ! | CCTTATGAAGAGAAATTAAA+GGG | - | tig0025492:50034-50053 | None:intergenic | 25.0% |
| !! | CCTTTAATTTCTCTTCATAA+GGG | + | tig0025492:50032-50051 | Msa1422910:intron | 25.0% |
| ! | TGGTGGTTTATATTATGTAT+TGG | + | tig0025492:50115-50134 | Msa1422910:intron | 25.0% |
| ! | GGTGGTTTATATTATGTATT+GGG | + | tig0025492:50116-50135 | Msa1422910:intron | 25.0% |
| ! | GTGGTTTATATTATGTATTG+GGG | + | tig0025492:50117-50136 | Msa1422910:intron | 25.0% |
| ! | TGGTTTATATTATGTATTGG+GGG | + | tig0025492:50118-50137 | Msa1422910:intron | 25.0% |
| !! | AGAAAATATCTCCATGTTTT+AGG | + | tig0025492:50271-50290 | Msa1422910:intron | 25.0% |
| ! | AACTAACCATACCAATAAAA+TGG | - | tig0025492:50309-50328 | None:intergenic | 25.0% |
| !!! | TTTTTCAGTTAATTAGCTCA+TGG | + | tig0025492:50558-50577 | Msa1422910:intron | 25.0% |
| !! | GCGTAAATATTCATAAGTTT+TGG | + | tig0025492:50601-50620 | Msa1422910:intron | 25.0% |
| !!! | ATATTCATAAGTTTTGGTTG+AGG | + | tig0025492:50607-50626 | Msa1422910:intron | 25.0% |
| ! | TTCTCAAACATTAAATAGGT+AGG | - | tig0025492:50633-50652 | None:intergenic | 25.0% |
| ! | TCTCTTCTCAAACATTAAAT+AGG | - | tig0025492:50637-50656 | None:intergenic | 25.0% |
| ! | TAATGTTTGAGAAGAGATAA+AGG | + | tig0025492:50640-50659 | Msa1422910:intron | 25.0% |
| !!! | TTTAACTTTTTATGTAAGGG+GGG | - | tig0025492:50694-50713 | None:intergenic | 25.0% |
| !!! | CTTTAACTTTTTATGTAAGG+GGG | - | tig0025492:50695-50714 | None:intergenic | 25.0% |
| ! | CTTTATTGATAAGGACAAAT+TGG | + | tig0025492:50850-50869 | Msa1422910:intron | 25.0% |
| !! | AAAATACACCATTTGGATTT+TGG | - | tig0025492:50912-50931 | None:intergenic | 25.0% |
| !! | TATTTTCTCTATGACATGTT+TGG | + | tig0025492:50926-50945 | Msa1422910:intron | 25.0% |
| ! | GGGCTTAATATAATAACAAT+TGG | - | tig0025492:50959-50978 | None:intergenic | 25.0% |
| ! | TTATTATATTAAGCCCTTGT+AGG | + | tig0025492:50963-50982 | Msa1422910:intron | 25.0% |
| ! | TAAAATAAAATCTGTCCTCA+CGG | + | tig0025492:51251-51270 | Msa1422910:intron | 25.0% |
| ! | AACTTCATCAAAGATTGATA+AGG | - | tig0025492:51652-51671 | None:intergenic | 25.0% |
| !!! | CTAGAACTTTTAATTTTGAG+AGG | - | tig0025492:51762-51781 | None:intergenic | 25.0% |
| ! | GTTTAATTCACTCATTAAAC+GGG | + | tig0025492:51857-51876 | Msa1422910:intron | 25.0% |
| ! | TTTAATTCACTCATTAAACG+GGG | + | tig0025492:51858-51877 | Msa1422910:intron | 25.0% |
| ! | TATATGAAAAACACATCAGA+GGG | - | tig0025492:51947-51966 | None:intergenic | 25.0% |
| ! | TTATATGAAAAACACATCAG+AGG | - | tig0025492:51948-51967 | None:intergenic | 25.0% |
| !! | ATAAGTATGAGAATTTTGGA+GGG | - | tig0025492:52539-52558 | None:intergenic | 25.0% |
| !! | TATAAGTATGAGAATTTTGG+AGG | - | tig0025492:52540-52559 | None:intergenic | 25.0% |
| ! | ATTCAAAAATCATTCGTGTA+AGG | - | tig0025492:52592-52611 | None:intergenic | 25.0% |
| !! | GTCCATATTATGTCTAAAAT+AGG | + | tig0025492:52630-52649 | Msa1422910:intron | 25.0% |
| !!! | GACCTATTTTAGACATAATA+TGG | - | tig0025492:52635-52654 | None:intergenic | 25.0% |
| !!! | TTTATTAGGTATTGAGATAG+AGG | + | tig0025492:52888-52907 | Msa1422910:intron | 25.0% |
| !!! | TTATTAGGTATTGAGATAGA+GGG | + | tig0025492:52889-52908 | Msa1422910:intron | 25.0% |
| !! | TAATTGATTTCAAGCAACTA+AGG | - | tig0025492:52935-52954 | None:intergenic | 25.0% |
| !! | TTTATTTCTTGCAGATGAAT+TGG | + | tig0025492:53002-53021 | Msa1422910:intron | 25.0% |
| ! | AAAATGCACATAAAAACGTT+TGG | - | tig0025492:53034-53053 | None:intergenic | 25.0% |
| ! | GTCAAACCATTATAACAAAA+TGG | - | tig0025492:53229-53248 | None:intergenic | 25.0% |
| ! | GAAAATTTGAATGAATGATG+AGG | - | tig0025492:53277-53296 | None:intergenic | 25.0% |
| ! | GAAAAGCACAATAACCAAAA+AGG | + | tig0025492:46726-46745 | Msa1422910:five_prime_UTR | 30.0% |
| ! | ATGTTTCTGTCCTGTTTATT+CGG | - | tig0025492:46792-46811 | None:intergenic | 30.0% |
| GATAGATCGTTGAAAAGAAT+AGG | - | tig0025492:46820-46839 | None:intergenic | 30.0% | |
| GAAAGTCAATGGAATTGAAT+CGG | - | tig0025492:46930-46949 | None:intergenic | 30.0% | |
| ! | TTGTTTCTTGTACGAATTAG+AGG | + | tig0025492:47409-47428 | Msa1422910:intron | 30.0% |
| ! | TTCTTTCCATTGTGTAGTTT+TGG | + | tig0025492:47710-47729 | Msa1422910:intron | 30.0% |
| GTATAACCAAAACTACACAA+TGG | - | tig0025492:47719-47738 | None:intergenic | 30.0% | |
| !!! | TTGTGTAGTTTTGGTTATAC+CGG | + | tig0025492:47719-47738 | Msa1422910:intron | 30.0% |
| ATAAGTAATGAAGACCATAG+AGG | - | tig0025492:47923-47942 | None:intergenic | 30.0% | |
| TGAATGAAATTTGCAGAAAG+TGG | + | tig0025492:48096-48115 | Msa1422910:intron | 30.0% | |
| GAAGATTGATATTTGGAAAG+GGG | + | tig0025492:48122-48141 | Msa1422910:CDS | 30.0% | |
| AAACAGATGATAGAAGAAAG+AGG | + | tig0025492:48164-48183 | Msa1422910:CDS | 30.0% | |
| ! | TATCTTGTATTGGTAAACCA+AGG | - | tig0025492:48274-48293 | None:intergenic | 30.0% |
| CACCCAAAAATATCTTGTAT+TGG | - | tig0025492:48284-48303 | None:intergenic | 30.0% | |
| !!! | CAATACAAGATATTTTTGGG+TGG | + | tig0025492:48282-48301 | Msa1422910:CDS | 30.0% |
| AATTGTCACATCACATTAGT+TGG | - | tig0025492:48367-48386 | None:intergenic | 30.0% | |
| TTTCAACCTGAAATGTCATA+AGG | - | tig0025492:48478-48497 | None:intergenic | 30.0% | |
| ACTGAAAAACATGAGACAAT+TGG | - | tig0025492:48796-48815 | None:intergenic | 30.0% | |
| GAACTACACAGTGTATTATT+AGG | - | tig0025492:48993-49012 | None:intergenic | 30.0% | |
| TGGTTTATGATAGAACATTC+TGG | + | tig0025492:49395-49414 | Msa1422910:intron | 30.0% | |
| ATTCACATGATAAATAGGTG+AGG | - | tig0025492:49806-49825 | None:intergenic | 30.0% | |
| CTTGAATTTGAAGAGAAACA+AGG | - | tig0025492:49925-49944 | None:intergenic | 30.0% | |
| ! | TTGGTAAAAGTGTATCCAAT+TGG | - | tig0025492:49980-49999 | None:intergenic | 30.0% |
| ! | TGGATACACTTTTACCAAAA+TGG | + | tig0025492:49982-50001 | Msa1422910:intron | 30.0% |
| ! | CCCTTTAATTTCTCTTCATA+AGG | + | tig0025492:50031-50050 | Msa1422910:intron | 30.0% |
| CCCTTATGAAGAGAAATTAA+AGG | - | tig0025492:50035-50054 | None:intergenic | 30.0% | |
| GAGAAGCTTATTACTATTAG+TGG | + | tig0025492:50095-50114 | Msa1422910:intron | 30.0% | |
| AAGCTTATTACTATTAGTGG+TGG | + | tig0025492:50098-50117 | Msa1422910:intron | 30.0% | |
| ! | TTCGCAATTTTCCTAAAACA+TGG | - | tig0025492:50285-50304 | None:intergenic | 30.0% |
| !! | AAATTGCGAAGCCATTTTAT+TGG | + | tig0025492:50295-50314 | Msa1422910:intron | 30.0% |
| !!! | CTATAGGTTTTATCGATTCT+TGG | + | tig0025492:50332-50351 | Msa1422910:intron | 30.0% |
| TTAAATGAAACAAGTCTACG+AGG | - | tig0025492:50364-50383 | None:intergenic | 30.0% | |
| TCATATGTCATAAGAACCAA+GGG | - | tig0025492:50436-50455 | None:intergenic | 30.0% | |
| GATTCTAATCTGAACTGTTT+AGG | + | tig0025492:50467-50486 | Msa1422910:intron | 30.0% | |
| TGTTAATATACACACGAGAA+TGG | + | tig0025492:50515-50534 | Msa1422910:intron | 30.0% | |
| AGATGTAAATTCAATGATGC+AGG | - | tig0025492:50733-50752 | None:intergenic | 30.0% | |
| ! | AAATTTGAAACTCTTGAGAG+TGG | - | tig0025492:50810-50829 | None:intergenic | 30.0% |
| CATAGAGAAAATACACCATT+TGG | - | tig0025492:50919-50938 | None:intergenic | 30.0% | |
| GGATTCTAATAAACCTACAA+GGG | - | tig0025492:50979-50998 | None:intergenic | 30.0% | |
| AGGATTCTAATAAACCTACA+AGG | - | tig0025492:50980-50999 | None:intergenic | 30.0% | |
| ! | TATAAAAAGGAGAGCATGAA+TGG | - | tig0025492:51032-51051 | None:intergenic | 30.0% |
| ! | CTTTATCCTTGATTTTTCAC+AGG | - | tig0025492:51108-51127 | None:intergenic | 30.0% |
| CTGTGAAAAATCAAGGATAA+AGG | + | tig0025492:51106-51125 | Msa1422910:intron | 30.0% | |
| AGAATTCATCCGAAAACATA+TGG | + | tig0025492:51181-51200 | Msa1422910:intron | 30.0% | |
| ! | TGGAAGTTTCCATATGTTTT+CGG | - | tig0025492:51193-51212 | None:intergenic | 30.0% |
| ACATCTAAACATTACGTCAA+TGG | - | tig0025492:51213-51232 | None:intergenic | 30.0% | |
| AAAATAAAATCTGTCCTCAC+GGG | + | tig0025492:51252-51271 | Msa1422910:intron | 30.0% | |
| TTAAAATAAGACTTGGGACT+TGG | - | tig0025492:51284-51303 | None:intergenic | 30.0% | |
| ATGCTATATCACAAGAACAA+AGG | - | tig0025492:51380-51399 | None:intergenic | 30.0% | |
| ! | TGCTGGTTATGCATATTTAT+TGG | + | tig0025492:51529-51548 | Msa1422910:CDS | 30.0% |
| TGGTTATGCATATTTATTGG+TGG | + | tig0025492:51532-51551 | Msa1422910:CDS | 30.0% | |
| GGTTATGCATATTTATTGGT+GGG | + | tig0025492:51533-51552 | Msa1422910:CDS | 30.0% | |
| !! | ATTGGTGGGTATTGATATAT+CGG | + | tig0025492:51547-51566 | Msa1422910:CDS | 30.0% |
| CGACTGCAATAAATTCTAAT+TGG | - | tig0025492:51997-52016 | None:intergenic | 30.0% | |
| TATAATCATCACCTTTCATG+TGG | + | tig0025492:52242-52261 | Msa1422910:intron | 30.0% | |
| ! | ACATTTTTCATCCACATGAA+AGG | - | tig0025492:52256-52275 | None:intergenic | 30.0% |
| TTCATGTGGATGAAAAATGT+TGG | + | tig0025492:52256-52275 | Msa1422910:intron | 30.0% | |
| AAAAATCATTCGTGTAAGGA+GGG | - | tig0025492:52588-52607 | None:intergenic | 30.0% | |
| TCAACTGTTAAAAATAGAGG+TGG | - | tig0025492:52704-52723 | None:intergenic | 30.0% | |
| GGTTCAACTGTTAAAAATAG+AGG | - | tig0025492:52707-52726 | None:intergenic | 30.0% | |
| ! | ATTTTTAACAGTTGAACCCA+AGG | + | tig0025492:52709-52728 | Msa1422910:intron | 30.0% |
| !! | AACTCGATTTTAACAACCTT+GGG | - | tig0025492:52728-52747 | None:intergenic | 30.0% |
| !! | AAACTCGATTTTAACAACCT+TGG | - | tig0025492:52729-52748 | None:intergenic | 30.0% |
| ! | ACTATACGAAAGTATGAAAC+AGG | - | tig0025492:52802-52821 | None:intergenic | 30.0% |
| CAAATGTTCATTCAAATTGG+AGG | + | tig0025492:53072-53091 | Msa1422910:three_prime_UTR | 30.0% | |
| AGGAGGGAATTGTATTTATA+CGG | + | tig0025492:53092-53111 | Msa1422910:three_prime_UTR | 30.0% | |
| !!! | TGCATGCCATTTTGTTATAA+TGG | + | tig0025492:53220-53239 | Msa1422910:three_prime_UTR | 30.0% |
| ! | TTTTCCAAGTACAAGTTTGA+AGG | + | tig0025492:53292-53311 | Msa1422910:three_prime_UTR | 30.0% |
| CTTGCACAAATATTATCCTT+TGG | + | tig0025492:53341-53360 | Msa1422910:three_prime_UTR | 30.0% | |
| ! | TTATCCTTTGGTTTCCATAT+TGG | + | tig0025492:53353-53372 | Msa1422910:three_prime_UTR | 30.0% |
| !! | GACAATTTTGATCTCCAATA+TGG | - | tig0025492:53370-53389 | None:intergenic | 30.0% |
| ! | GAGAATCATGATACCCTTTT+TGG | - | tig0025492:46743-46762 | None:intergenic | 35.0% |
| !!! | GTGTGGTTTTTTGTTTGTGT+GGG | - | tig0025492:46770-46789 | None:intergenic | 35.0% |
| AAAAACCACACCGAATAAAC+AGG | + | tig0025492:46779-46798 | Msa1422910:five_prime_UTR | 35.0% | |
| AGATTCATGGTGAAAGTCAA+TGG | - | tig0025492:46941-46960 | None:intergenic | 35.0% | |
| GGTAGAAATCTTGATAGACA+GGG | - | tig0025492:46966-46985 | None:intergenic | 35.0% | |
| AGGTAGAAATCTTGATAGAC+AGG | - | tig0025492:46967-46986 | None:intergenic | 35.0% | |
| !! | GAAGTGTCGAAGTTACATAA+TGG | - | tig0025492:47114-47133 | None:intergenic | 35.0% |
| TTTCTTGTACGAATTAGAGG+TGG | + | tig0025492:47412-47431 | Msa1422910:intron | 35.0% | |
| !! | TTATTGGTGTTGATGTGTCA+GGG | - | tig0025492:47751-47770 | None:intergenic | 35.0% |
| !! | ATTATTGGTGTTGATGTGTC+AGG | - | tig0025492:47752-47771 | None:intergenic | 35.0% |
| ! | ATGTCTTTGATCAGAAGTGT+CGG | + | tig0025492:47859-47878 | Msa1422910:intron | 35.0% |
| AGACCATAGAGGAAAAAAGA+GGG | - | tig0025492:47912-47931 | None:intergenic | 35.0% | |
| AAGACCATAGAGGAAAAAAG+AGG | - | tig0025492:47913-47932 | None:intergenic | 35.0% | |
| ATGCCTAAATTACCCTTTGT+TGG | + | tig0025492:48033-48052 | Msa1422910:intron | 35.0% | |
| TGCCTAAATTACCCTTTGTT+GGG | + | tig0025492:48034-48053 | Msa1422910:intron | 35.0% | |
| TACCCAACAAAGGGTAATTT+AGG | - | tig0025492:48039-48058 | None:intergenic | 35.0% | |
| AAATTACCCTTTGTTGGGTA+TGG | + | tig0025492:48039-48058 | Msa1422910:intron | 35.0% | |
| CTGCAAATTTCATTCACTTC+AGG | - | tig0025492:48092-48111 | None:intergenic | 35.0% | |
| GTGGCAAGAAGATTGATATT+TGG | + | tig0025492:48115-48134 | Msa1422910:CDS | 35.0% | |
| CTGTAACTTATGATGAACCT+TGG | + | tig0025492:48254-48273 | Msa1422910:CDS | 35.0% | |
| ACAGTCTATATGTATACTGC+TGG | + | tig0025492:48504-48523 | Msa1422910:CDS | 35.0% | |
| !! | TTTAACTTGCTGAGTCTTGA+TGG | + | tig0025492:48877-48896 | Msa1422910:intron | 35.0% |
| GAGTCTTGATGGAAAACAAA+AGG | + | tig0025492:48888-48907 | Msa1422910:intron | 35.0% | |
| TAAAATGAGAGGGTTGTGTT+AGG | + | tig0025492:49063-49082 | Msa1422910:intron | 35.0% | |
| ! | GATTCGACAAAGTTTTACGT+TGG | - | tig0025492:49098-49117 | None:intergenic | 35.0% |
| GTCGAATCTCTTGTTAGATT+AGG | + | tig0025492:49110-49129 | Msa1422910:intron | 35.0% | |
| TGATGTGTAGTAAGACTAGA+TGG | + | tig0025492:49143-49162 | Msa1422910:intron | 35.0% | |
| GATGTGTAGTAAGACTAGAT+GGG | + | tig0025492:49144-49163 | Msa1422910:intron | 35.0% | |
| !! | GACCTTTTGATTCTGTAGTA+AGG | + | tig0025492:49272-49291 | Msa1422910:intron | 35.0% |
| CTCCTTACTACAGAATCAAA+AGG | - | tig0025492:49277-49296 | None:intergenic | 35.0% | |
| GGGAAAATGTCTAAATACAG+TGG | + | tig0025492:49620-49639 | Msa1422910:CDS | 35.0% | |
| TACTCCAAAGAATCCAGAAT+GGG | - | tig0025492:49718-49737 | None:intergenic | 35.0% | |
| TAGTGCCTTTATCAAGTGTT+TGG | + | tig0025492:50073-50092 | Msa1422910:intron | 35.0% | |
| CTTCTCCAAACACTTGATAA+AGG | - | tig0025492:50081-50100 | None:intergenic | 35.0% | |
| TCTCTGGTACTTATTGTAAC+TGG | - | tig0025492:50252-50271 | None:intergenic | 35.0% | |
| ! | ACATGGAGATATTTTCTCTC+TGG | - | tig0025492:50268-50287 | None:intergenic | 35.0% |
| !! | GGTATGGTTAGTTTCACTAT+AGG | + | tig0025492:50316-50335 | Msa1422910:intron | 35.0% |
| GTAGTGTTGTATTATACCCA+TGG | + | tig0025492:50384-50403 | Msa1422910:intron | 35.0% | |
| CACTACTTCTTAAGAACCAT+GGG | - | tig0025492:50403-50422 | None:intergenic | 35.0% | |
| ACACTACTTCTTAAGAACCA+TGG | - | tig0025492:50404-50423 | None:intergenic | 35.0% | |
| GTAGTGTTGTATTATACCCT+TGG | + | tig0025492:50417-50436 | Msa1422910:intron | 35.0% | |
| GTCATATGTCATAAGAACCA+AGG | - | tig0025492:50437-50456 | None:intergenic | 35.0% | |
| TTATGACATATGACGTCCTA+TGG | + | tig0025492:50443-50462 | Msa1422910:intron | 35.0% | |
| GTTCAGATTAGAATCTCCAT+AGG | - | tig0025492:50462-50481 | None:intergenic | 35.0% | |
| ! | TCTGAACTGTTTAGGAGTTT+TGG | + | tig0025492:50475-50494 | Msa1422910:intron | 35.0% |
| !!! | AGGAGTTTTGGAAAATCTAC+TGG | + | tig0025492:50487-50506 | Msa1422910:intron | 35.0% |
| !!! | GGAGTTTTGGAAAATCTACT+GGG | + | tig0025492:50488-50507 | Msa1422910:intron | 35.0% |
| !!! | GAGTTTTGGAAAATCTACTG+GGG | + | tig0025492:50489-50508 | Msa1422910:intron | 35.0% |
| AAAAACTCACATGAGAGGAT+TGG | - | tig0025492:50543-50562 | None:intergenic | 35.0% | |
| AACTGAAAAACTCACATGAG+AGG | - | tig0025492:50548-50567 | None:intergenic | 35.0% | |
| ! | TTTTGAATGTAAATGGCACC+AGG | + | tig0025492:50827-50846 | Msa1422910:intron | 35.0% |
| TTGTCCTTATCAATAAAGCC+TGG | - | tig0025492:50848-50867 | None:intergenic | 35.0% | |
| GTTTGACCTGTGAAAAATCA+AGG | + | tig0025492:51099-51118 | Msa1422910:intron | 35.0% | |
| ! | CAAGGATAAAGGCATATGAT+AGG | + | tig0025492:51117-51136 | Msa1422910:intron | 35.0% |
| ! | AAAGGCATATGATAGGATTG+TGG | + | tig0025492:51124-51143 | Msa1422910:intron | 35.0% |
| AAGGCATATGATAGGATTGT+GGG | + | tig0025492:51125-51144 | Msa1422910:intron | 35.0% | |
| AATATATTGGACCTTCCACT+TGG | - | tig0025492:51479-51498 | None:intergenic | 35.0% | |
| GTTAAACAAATCCAAGCAAG+AGG | + | tig0025492:51576-51595 | Msa1422910:CDS | 35.0% | |
| AGTCTCACTTCTTAATTGAC+AGG | - | tig0025492:52337-52356 | None:intergenic | 35.0% | |
| GTCAATTAAGAAGTGAGACT+CGG | + | tig0025492:52337-52356 | Msa1422910:intron | 35.0% | |
| TCAATTAAGAAGTGAGACTC+GGG | + | tig0025492:52338-52357 | Msa1422910:intron | 35.0% | |
| CAAAAATCATTCGTGTAAGG+AGG | - | tig0025492:52589-52608 | None:intergenic | 35.0% | |
| TTTGTGCTAGCATTACATCA+TGG | + | tig0025492:52824-52843 | Msa1422910:intron | 35.0% | |
| ACATCATGGTAGATTGACAT+CGG | + | tig0025492:52838-52857 | Msa1422910:intron | 35.0% | |
| ATGCACATAAAAACGTTTGG+AGG | - | tig0025492:53031-53050 | None:intergenic | 35.0% | |
| CATTTGAAAATGGTTGACAG+TGG | - | tig0025492:53058-53077 | None:intergenic | 35.0% | |
| ATGTTCATTCAAATTGGAGG+AGG | + | tig0025492:53075-53094 | Msa1422910:three_prime_UTR | 35.0% | |
| TGTTCATTCAAATTGGAGGA+GGG | + | tig0025492:53076-53095 | Msa1422910:three_prime_UTR | 35.0% | |
| GGATTCGAGAATATAGACTA+CGG | + | tig0025492:53113-53132 | Msa1422910:three_prime_UTR | 35.0% | |
| ATCTCCAATATGGAAACCAA+AGG | - | tig0025492:53360-53379 | None:intergenic | 35.0% | |
| !!! | GGTGTGGTTTTTTGTTTGTG+TGG | - | tig0025492:46771-46790 | None:intergenic | 40.0% |
| GAATCGGTGAATGAAATCCA+TGG | - | tig0025492:46914-46933 | None:intergenic | 40.0% | |
| GATAGACAGGGTAAGATTCA+TGG | - | tig0025492:46954-46973 | None:intergenic | 40.0% | |
| TCTATCAAGAAGGAAGCGAA+TGG | - | tig0025492:47019-47038 | None:intergenic | 40.0% | |
| CGAAGAGGAATCTATCAAGA+AGG | - | tig0025492:47029-47048 | None:intergenic | 40.0% | |
| TCTTGATAGATTCCTCTTCG+AGG | + | tig0025492:47029-47048 | Msa1422910:CDS | 40.0% | |
| TAGAAAACGTCTCTTGTGTC+TGG | + | tig0025492:47137-47156 | Msa1422910:intron | 40.0% | |
| AACCTCACTCTTTCAGAATC+AGG | - | tig0025492:47383-47402 | None:intergenic | 40.0% | |
| ! | TTTTGTGAAGATGTAGACGG+TGG | - | tig0025492:47603-47622 | None:intergenic | 40.0% |
| CTTCTGATCAAAGACATGTC+CGG | - | tig0025492:47856-47875 | None:intergenic | 40.0% | |
| GACCATAGAGGAAAAAAGAG+GGG | - | tig0025492:47911-47930 | None:intergenic | 40.0% | |
| AAACGACCATACCCAACAAA+GGG | - | tig0025492:48048-48067 | None:intergenic | 40.0% | |
| TAAACGACCATACCCAACAA+AGG | - | tig0025492:48049-48068 | None:intergenic | 40.0% | |
| !!! | AAGATATTTTTGGGTGGGAC+CGG | + | tig0025492:48288-48307 | Msa1422910:CDS | 40.0% |
| GTGTGACCTTATGACATTTC+AGG | + | tig0025492:48469-48488 | Msa1422910:intron | 40.0% | |
| CAACACAATGAGAATGACAG+TGG | - | tig0025492:48613-48632 | None:intergenic | 40.0% | |
| ! | TTTTGCATGTGAGTCTCTGT+TGG | - | tig0025492:48936-48955 | None:intergenic | 40.0% |
| !! | TTAGCCTTGCTATACATAGC+CGG | + | tig0025492:49027-49046 | Msa1422910:intron | 40.0% |
| !! | AAGTTTTACGTTGGCTGTTG+AGG | - | tig0025492:49089-49108 | None:intergenic | 40.0% |
| GTAGTAAGACTAGATGGGAT+AGG | + | tig0025492:49149-49168 | Msa1422910:intron | 40.0% | |
| CATTAGAGAGAGAGAGAGTT+GGG | + | tig0025492:49186-49205 | Msa1422910:intron | 40.0% | |
| ATTAGAGAGAGAGAGAGTTG+GGG | + | tig0025492:49187-49206 | Msa1422910:intron | 40.0% | |
| ATGTGAAAAATAGGCTTCGG+TGG | + | tig0025492:49230-49249 | Msa1422910:intron | 40.0% | |
| AAAAATAGGCTTCGGTGGTT+TGG | + | tig0025492:49235-49254 | Msa1422910:intron | 40.0% | |
| AAAATAGGCTTCGGTGGTTT+GGG | + | tig0025492:49236-49255 | Msa1422910:intron | 40.0% | |
| AGTAAGGAGAGTAGATCAGA+TGG | + | tig0025492:49288-49307 | Msa1422910:intron | 40.0% | |
| CTTATCCCACTAAGTGAGAT+CGG | - | tig0025492:49440-49459 | None:intergenic | 40.0% | |
| TCCAGAATGGGTAGTAAATG+AGG | - | tig0025492:49706-49725 | None:intergenic | 40.0% | |
| ACTACCCATTCTGGATTCTT+TGG | + | tig0025492:49711-49730 | Msa1422910:CDS | 40.0% | |
| GTACTCCAAAGAATCCAGAA+TGG | - | tig0025492:49719-49738 | None:intergenic | 40.0% | |
| !! | TCTGGATTCTTTGGAGTACA+AGG | + | tig0025492:49720-49739 | Msa1422910:CDS | 40.0% |
| TACCAAAATGGTAGCTGTAC+TGG | + | tig0025492:49994-50013 | Msa1422910:intron | 40.0% | |
| ! | AACCAGTACAGCTACCATTT+TGG | - | tig0025492:49999-50018 | None:intergenic | 40.0% |
| ! | ATGTATTGGGGGTACAACAA+TGG | + | tig0025492:50129-50148 | Msa1422910:intron | 40.0% |
| !! | GCGAAGCCATTTTATTGGTA+TGG | + | tig0025492:50300-50319 | Msa1422910:intron | 40.0% |
| !! | ACAAATTGGCTTTGCTCAAC+TGG | + | tig0025492:50864-50883 | Msa1422910:intron | 40.0% |
| !! | CTTTGCTCAACTGGTTTGAT+TGG | + | tig0025492:50873-50892 | Msa1422910:intron | 40.0% |
| ! | CCATTTGGATTTTGGACGAT+GGG | - | tig0025492:50904-50923 | None:intergenic | 40.0% |
| ! | ACCATTTGGATTTTGGACGA+TGG | - | tig0025492:50905-50924 | None:intergenic | 40.0% |
| !! | TTGGTGCTTTTCCTTATCCA+AGG | - | tig0025492:51460-51479 | None:intergenic | 40.0% |
| TAGTCTTCTATACTGCTTGC+TGG | + | tig0025492:51512-51531 | Msa1422910:CDS | 40.0% | |
| ! | CACTAAGTTTTCCTCTTGCT+TGG | - | tig0025492:51590-51609 | None:intergenic | 40.0% |
| CAAAGATTGATAAGGAAGCC+AGG | - | tig0025492:51644-51663 | None:intergenic | 40.0% | |
| ! | CAAAGGTGAGTTGAAAGTAG+TGG | + | tig0025492:52189-52208 | Msa1422910:intron | 40.0% |
| CACTTCTTAATTGACAGGAC+TGG | - | tig0025492:52332-52351 | None:intergenic | 40.0% | |
| !! | GCCTTTTTCATTGTCCTCAA+GGG | + | tig0025492:52964-52983 | Msa1422910:intron | 40.0% |
| TCCCTTGAGGACAATGAAAA+AGG | - | tig0025492:52968-52987 | None:intergenic | 40.0% | |
| ! | AGACTACGGAGCTGATTTAA+AGG | + | tig0025492:53127-53146 | Msa1422910:three_prime_UTR | 40.0% |
| ! | GACTACGGAGCTGATTTAAA+GGG | + | tig0025492:53128-53147 | Msa1422910:three_prime_UTR | 40.0% |
| ! | GCTTGAATATTTTCCCCTCA+AGG | + | tig0025492:53251-53270 | Msa1422910:three_prime_UTR | 40.0% |
| AATGAATGATGAGGCCTTGA+GGG | - | tig0025492:53268-53287 | None:intergenic | 40.0% | |
| CAGTCCTTCAAACTTGTACT+TGG | - | tig0025492:53299-53318 | None:intergenic | 40.0% | |
| ! | TCTGTCCTGTTTATTCGGTG+TGG | - | tig0025492:46787-46806 | None:intergenic | 45.0% |
| AGAGAGCGAAGAAAGGAAGA+AGG | - | tig0025492:46987-47006 | None:intergenic | 45.0% | |
| CAAGAAGGAAGCGAATGGAA+GGG | - | tig0025492:47014-47033 | None:intergenic | 45.0% | |
| TCAAGAAGGAAGCGAATGGA+AGG | - | tig0025492:47015-47034 | None:intergenic | 45.0% | |
| TAGAGTGACTAACCTCGAAG+AGG | - | tig0025492:47044-47063 | None:intergenic | 45.0% | |
| ! | CACCTGATTCTGAAAGAGTG+AGG | + | tig0025492:47378-47397 | Msa1422910:intron | 45.0% |
| CTTGTACGAATTAGAGGTGG+TGG | + | tig0025492:47415-47434 | Msa1422910:intron | 45.0% | |
| !! | ATCAGAAGTGTCGGTGTTTC+TGG | + | tig0025492:47868-47887 | Msa1422910:intron | 45.0% |
| !! | TCAGAAGTGTCGGTGTTTCT+GGG | + | tig0025492:47869-47888 | Msa1422910:intron | 45.0% |
| GAGGAAAAAAGAGGGGCAAA+AGG | - | tig0025492:47904-47923 | None:intergenic | 45.0% | |
| !!! | TGCCCCTCTTTTTTCCTCTA+TGG | + | tig0025492:47906-47925 | Msa1422910:intron | 45.0% |
| !!! | AGATATTTTTGGGTGGGACC+GGG | + | tig0025492:48289-48308 | Msa1422910:CDS | 45.0% |
| !! | ATTTTGGGAAACAAGGCGCT+CGG | + | tig0025492:48557-48576 | Msa1422910:CDS | 45.0% |
| !! | CTTTTTCACATAGACCTCGC+TGG | + | tig0025492:48827-48846 | Msa1422910:intron | 45.0% |
| TACGTAACTCATAACCAGCG+AGG | - | tig0025492:48844-48863 | None:intergenic | 45.0% | |
| TGCAAAAACACACACCTGAG+AGG | + | tig0025492:48949-48968 | Msa1422910:intron | 45.0% | |
| ! | ACAACCCTCTCATTTTACCC+GGG | - | tig0025492:49060-49079 | None:intergenic | 45.0% |
| ! | CACAACCCTCTCATTTTACC+CGG | - | tig0025492:49061-49080 | None:intergenic | 45.0% |
| CCAACTCTCTCTCTCTCTAA+TGG | - | tig0025492:49188-49207 | None:intergenic | 45.0% | |
| CCATTAGAGAGAGAGAGAGT+TGG | + | tig0025492:49185-49204 | Msa1422910:intron | 45.0% | |
| AAGGAGAGTAGATCAGATGG+AGG | + | tig0025492:49291-49310 | Msa1422910:intron | 45.0% | |
| GAGGATTGTCAGATCACAAG+AGG | + | tig0025492:49310-49329 | Msa1422910:intron | 45.0% | |
| TGTCAGATCACAAGAGGTAG+AGG | + | tig0025492:49316-49335 | Msa1422910:intron | 45.0% | |
| ACTAAGTGAGATCGGCTACA+TGG | - | tig0025492:49432-49451 | None:intergenic | 45.0% | |
| ATGTAGCCGATCTCACTTAG+TGG | + | tig0025492:49431-49450 | Msa1422910:intron | 45.0% | |
| TGTAGCCGATCTCACTTAGT+GGG | + | tig0025492:49432-49451 | Msa1422910:intron | 45.0% | |
| CGATCTCACTTAGTGGGATA+AGG | + | tig0025492:49438-49457 | Msa1422910:intron | 45.0% | |
| TCACTTAGTGGGATAAGGCA+TGG | + | tig0025492:49443-49462 | Msa1422910:intron | 45.0% | |
| ! | ACATTCAGGTTTGCTCGTGT+TGG | + | tig0025492:49548-49567 | Msa1422910:intron | 45.0% |
| AGTGACGTGTTTCTCGAGAT+AGG | + | tig0025492:49599-49618 | Msa1422910:CDS | 45.0% | |
| GTGACGTGTTTCTCGAGATA+GGG | + | tig0025492:49600-49619 | Msa1422910:CDS | 45.0% | |
| GCCTCATTTACTACCCATTC+TGG | + | tig0025492:49702-49721 | Msa1422910:CDS | 45.0% | |
| AACTCTAGTAGAGACAGGGA+AGG | - | tig0025492:50783-50802 | None:intergenic | 45.0% | |
| TTCCCTGTCTCTACTAGAGT+TGG | + | tig0025492:50782-50801 | Msa1422910:intron | 45.0% | |
| AGCCAACTCTAGTAGAGACA+GGG | - | tig0025492:50787-50806 | None:intergenic | 45.0% | |
| !! | GGCACCAGGCTTTATTGATA+AGG | + | tig0025492:50841-50860 | Msa1422910:intron | 45.0% |
| CCCATCGTCCAAAATCCAAA+TGG | + | tig0025492:50901-50920 | Msa1422910:intron | 45.0% | |
| CTATGAAGTTCTGCTCACCT+TGG | + | tig0025492:51440-51459 | Msa1422910:CDS | 45.0% | |
| AGTTCTGCTCACCTTGGATA+AGG | + | tig0025492:51446-51465 | Msa1422910:CDS | 45.0% | |
| !! | GGATAAGGAAAAGCACCAAG+TGG | + | tig0025492:51461-51480 | Msa1422910:CDS | 45.0% |
| !! | AAGGAAAAGCACCAAGTGGA+AGG | + | tig0025492:51465-51484 | Msa1422910:CDS | 45.0% |
| CTTAGTGAAGACGTTCGATC+TGG | + | tig0025492:51603-51622 | Msa1422910:CDS | 45.0% | |
| ! | TGGTAAGTTGAATGTCTGCC+TGG | + | tig0025492:51623-51642 | Msa1422910:intron | 45.0% |
| !!! | TGGGAGTTTTGGAGAGTAAG+AGG | + | tig0025492:52368-52387 | Msa1422910:intron | 45.0% |
| !!! | GGGAGTTTTGGAGAGTAAGA+GGG | + | tig0025492:52369-52388 | Msa1422910:intron | 45.0% |
| !!! | GGAGTTTTGGAGAGTAAGAG+GGG | + | tig0025492:52370-52389 | Msa1422910:intron | 45.0% |
| GAGAGTAAGAGGGGTTTGTA+GGG | + | tig0025492:52379-52398 | Msa1422910:intron | 45.0% | |
| TCATGGTAGATTGACATCGG+AGG | + | tig0025492:52841-52860 | Msa1422910:intron | 45.0% | |
| !! | GGCCTTTTTCATTGTCCTCA+AGG | + | tig0025492:52963-52982 | Msa1422910:intron | 45.0% |
| TCCTCAAGGGAAATGCTGTT+TGG | + | tig0025492:52977-52996 | Msa1422910:intron | 45.0% | |
| ACCAAACAGCATTTCCCTTG+AGG | - | tig0025492:52981-53000 | None:intergenic | 45.0% | |
| ATGAATGATGAGGCCTTGAG+GGG | - | tig0025492:53267-53286 | None:intergenic | 45.0% | |
| GAATGAATGATGAGGCCTTG+AGG | - | tig0025492:53269-53288 | None:intergenic | 45.0% | |
| !!! | AATTTTTTAAAAATCATTAT+TGG | - | tig0025492:47767-47786 | None:intergenic | 5.0% |
| !! | TTGAATATATAATAATATAT+TGG | - | tig0025492:51492-51511 | None:intergenic | 5.0% |
| GGGAAGAAGAGAGCGAAGAA+AGG | - | tig0025492:46994-47013 | None:intergenic | 50.0% | |
| GTGAAGATGTAGACGGTGGT+AGG | - | tig0025492:47599-47618 | None:intergenic | 50.0% | |
| TGATGTGTCAGGGTCATGTC+CGG | - | tig0025492:47741-47760 | None:intergenic | 50.0% | |
| ACACGTGTCAGTGTCTGACT+CGG | - | tig0025492:47827-47846 | None:intergenic | 50.0% | |
| CACTGACACGTGTCAAACAC+CGG | + | tig0025492:47834-47853 | Msa1422910:intron | 50.0% | |
| !!! | GATATTTTTGGGTGGGACCG+GGG | + | tig0025492:48290-48309 | Msa1422910:CDS | 50.0% |
| ! | AAACAAGGCGCTCGGACTTT+GGG | + | tig0025492:48565-48584 | Msa1422910:CDS | 50.0% |
| ! | CTCTCATTTTACCCGGGCTT+GGG | - | tig0025492:49054-49073 | None:intergenic | 50.0% |
| CAAGCCCGGGTAAAATGAGA+GGG | + | tig0025492:49053-49072 | Msa1422910:intron | 50.0% | |
| GAGCCAACTCTAGTAGAGAC+AGG | - | tig0025492:50788-50807 | None:intergenic | 50.0% | |
| AGTGAGACTCGGGTTCTGTT+TGG | + | tig0025492:52348-52367 | Msa1422910:intron | 50.0% | |
| GTGAGACTCGGGTTCTGTTT+GGG | + | tig0025492:52349-52368 | Msa1422910:intron | 50.0% | |
| ! | CGGGTTCTGTTTGGGAGTTT+TGG | + | tig0025492:52357-52376 | Msa1422910:intron | 50.0% |
| GGAGAGTAAGAGGGGTTTGT+AGG | + | tig0025492:52378-52397 | Msa1422910:intron | 50.0% | |
| AGTAAGAGGGGTTTGTAGGG+AGG | + | tig0025492:52382-52401 | Msa1422910:intron | 50.0% | |
| TATGCAGCACCACAACGTTC+AGG | + | tig0025492:53192-53211 | Msa1422910:three_prime_UTR | 50.0% | |
| ! | GAAACAAGGCGCTCGGACTT+TGG | + | tig0025492:48564-48583 | Msa1422910:CDS | 55.0% |
| ! | AACAAGGCGCTCGGACTTTG+GGG | + | tig0025492:48566-48585 | Msa1422910:CDS | 55.0% |
| GGGACCGGCTATGTATAGCA+AGG | - | tig0025492:49034-49053 | None:intergenic | 55.0% | |
| ! | ATTTTACCCGGGCTTGGGAC+CGG | - | tig0025492:49049-49068 | None:intergenic | 55.0% |
| ! | CCTCTCATTTTACCCGGGCT+TGG | - | tig0025492:49055-49074 | None:intergenic | 55.0% |
| CCAAGCCCGGGTAAAATGAG+AGG | + | tig0025492:49052-49071 | Msa1422910:intron | 55.0% | |
| GGACTTGGAAACATCCCGTG+AGG | - | tig0025492:51269-51288 | None:intergenic | 55.0% | |
| AGGGGTTTGTAGGGAGGTGA+GGG | + | tig0025492:52388-52407 | Msa1422910:intron | 55.0% | |
| TGCAGCAGACCTGAACGTTG+TGG | - | tig0025492:53204-53223 | None:intergenic | 55.0% | |
| GAGCACTCTCACTGCCTCTC+AGG | - | tig0025492:48966-48985 | None:intergenic | 60.0% | |
| TACATAGCCGGTCCCAAGCC+CGG | + | tig0025492:49039-49058 | Msa1422910:intron | 60.0% | |
| GAGGGGTTTGTAGGGAGGTG+AGG | + | tig0025492:52387-52406 | Msa1422910:intron | 60.0% | |
| TCTGGCCAGACCTGACTCCC+CGG | - | tig0025492:48310-48329 | None:intergenic | 65.0% | |
| ACATAGCCGGTCCCAAGCCC+GGG | + | tig0025492:49040-49059 | Msa1422910:intron | 65.0% | |
| TTGGGTGGGACCGGGGAGTC+AGG | + | tig0025492:48297-48316 | Msa1422910:CDS | 70.0% | |
| TGGGACCGGGGAGTCAGGTC+TGG | + | tig0025492:48302-48321 | Msa1422910:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0025492 | gene | 46724 | 53524 | 46724 | ID=Msa1422910;Name=Msa1422910 |
| tig0025492 | mRNA | 46724 | 53524 | 46724 | ID=Msa1422910-mRNA-1;Parent=Msa1422910;Name=Msa1422910-mRNA-1;_AED=0.06;_eAED=0.06;_QI=189|1|1|1|0.83|0.71|7|547|306 |
| tig0025492 | exon | 46724 | 47050 | 46724 | ID=Msa1422910-mRNA-1:exon:2903;Parent=Msa1422910-mRNA-1 |
| tig0025492 | exon | 48112 | 48341 | 48112 | ID=Msa1422910-mRNA-1:exon:2904;Parent=Msa1422910-mRNA-1 |
| tig0025492 | exon | 48491 | 48646 | 48491 | ID=Msa1422910-mRNA-1:exon:2905;Parent=Msa1422910-mRNA-1 |
| tig0025492 | exon | 49556 | 49741 | 49556 | ID=Msa1422910-mRNA-1:exon:2906;Parent=Msa1422910-mRNA-1 |
| tig0025492 | exon | 51440 | 51624 | 51440 | ID=Msa1422910-mRNA-1:exon:2907;Parent=Msa1422910-mRNA-1 |
| tig0025492 | exon | 52130 | 52193 | 52130 | ID=Msa1422910-mRNA-1:exon:2908;Parent=Msa1422910-mRNA-1 |
| tig0025492 | exon | 53016 | 53524 | 53016 | ID=Msa1422910-mRNA-1:exon:2909;Parent=Msa1422910-mRNA-1 |
| tig0025492 | five_prime_UTR | 46724 | 46912 | 46724 | ID=Msa1422910-mRNA-1:five_prime_utr;Parent=Msa1422910-mRNA-1 |
| tig0025492 | CDS | 46913 | 47050 | 46913 | ID=Msa1422910-mRNA-1:cds;Parent=Msa1422910-mRNA-1 |
| tig0025492 | CDS | 48112 | 48341 | 48112 | ID=Msa1422910-mRNA-1:cds;Parent=Msa1422910-mRNA-1 |
| tig0025492 | CDS | 48491 | 48646 | 48491 | ID=Msa1422910-mRNA-1:cds;Parent=Msa1422910-mRNA-1 |
| tig0025492 | CDS | 49556 | 49741 | 49556 | ID=Msa1422910-mRNA-1:cds;Parent=Msa1422910-mRNA-1 |
| tig0025492 | CDS | 51440 | 51624 | 51440 | ID=Msa1422910-mRNA-1:cds;Parent=Msa1422910-mRNA-1 |
| tig0025492 | CDS | 52130 | 52155 | 52130 | ID=Msa1422910-mRNA-1:cds;Parent=Msa1422910-mRNA-1 |
| tig0025492 | three_prime_UTR | 52156 | 52193 | 52156 | ID=Msa1422910-mRNA-1:three_prime_utr;Parent=Msa1422910-mRNA-1 |
| tig0025492 | three_prime_UTR | 53016 | 53524 | 53016 | ID=Msa1422910-mRNA-1:three_prime_utr;Parent=Msa1422910-mRNA-1 |
| Gene Sequence |
| Protein sequence |
