Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1079900 | XP_013450057.1 | 84.416 | 462 | 21 | 3 | 1 | 411 | 1 | 462 | 0.0 | 732 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1079900 | sp|Q8S9J0|TAUE4_ARATH | 61.978 | 455 | 121 | 3 | 5 | 411 | 9 | 459 | 0.0 | 516 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1079900 | A0A072UE30 | 84.416 | 462 | 21 | 3 | 1 | 411 | 1 | 462 | 0.0 | 732 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1007980 | Msa1079900 | 0.804172 | 2.453989e-49 | -8.615850e-47 |
| Msa1042090 | Msa1079900 | 0.807778 | 4.280728e-50 | -8.615850e-47 |
| Msa1049440 | Msa1079900 | 0.831129 | 1.988261e-55 | -8.615850e-47 |
| Msa1079900 | Msa1098070 | 0.823857 | 1.105071e-53 | -8.615850e-47 |
| Msa1079900 | Msa1124840 | 0.952612 | 1.664758e-110 | -8.615850e-47 |
| Msa1079900 | Msa1167560 | 0.989933 | 2.669849e-180 | -8.615850e-47 |
| Msa1079900 | Msa1179680 | 0.812653 | 3.804109e-51 | -8.615850e-47 |
| Msa1079900 | Msa1232640 | 0.817831 | 2.689085e-52 | -8.615850e-47 |
| Msa1079900 | Msa1313230 | 0.839539 | 1.491729e-57 | -8.615850e-47 |
| Msa1079900 | Msa1350030 | 0.814875 | 1.232942e-51 | -8.615850e-47 |
| Msa1079900 | Msa1413220 | 0.810681 | 1.021427e-50 | -8.615850e-47 |
| Msa1079900 | Msa1425630 | 0.805856 | 1.090705e-49 | -8.615850e-47 |
| Msa0568490 | Msa1079900 | 0.802119 | 6.525399e-49 | -8.615850e-47 |
| Msa0581440 | Msa1079900 | 0.806222 | 9.132729e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1079900 | MtrunA17_Chr7g0265481 | 84.416 | 462 | 21 | 3 | 1 | 411 | 1 | 462 | 0.0 | 732 |
| Msa1079900 | MtrunA17_Chr1g0179621 | 61.064 | 470 | 117 | 7 | 1 | 410 | 1 | 464 | 0.0 | 515 |
| Msa1079900 | MtrunA17_Chr3g0139541 | 44.144 | 444 | 181 | 10 | 21 | 408 | 34 | 466 | 1.61e-99 | 304 |
| Msa1079900 | MtrunA17_Chr8g0373471 | 42.548 | 416 | 177 | 5 | 45 | 408 | 60 | 465 | 4.11e-98 | 301 |
| Msa1079900 | MtrunA17_Chr5g0403901 | 52.510 | 259 | 115 | 3 | 45 | 301 | 67 | 319 | 2.80e-77 | 247 |
| Msa1079900 | MtrunA17_Chr5g0403901 | 47.945 | 73 | 38 | 0 | 338 | 410 | 398 | 470 | 3.13e-15 | 77.4 |
| Msa1079900 | MtrunA17_Chr8g0380211 | 45.048 | 313 | 150 | 5 | 22 | 323 | 41 | 342 | 3.18e-73 | 236 |
| Msa1079900 | MtrunA17_Chr8g0380211 | 48.611 | 72 | 37 | 0 | 338 | 409 | 405 | 476 | 8.15e-11 | 63.5 |
| Msa1079900 | MtrunA17_Chr1g0157751 | 44.727 | 275 | 142 | 3 | 35 | 301 | 34 | 306 | 4.21e-69 | 225 |
| Msa1079900 | MtrunA17_Chr1g0157751 | 50.704 | 71 | 35 | 0 | 338 | 408 | 385 | 455 | 1.75e-14 | 75.1 |
| Msa1079900 | MtrunA17_Chr8g0380191 | 35.260 | 346 | 141 | 5 | 107 | 409 | 10 | 315 | 5.77e-53 | 179 |
| Msa1079900 | MtrunA17_Chr2g0280401 | 30.081 | 246 | 149 | 5 | 53 | 280 | 55 | 295 | 2.07e-21 | 95.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1079900 | AT2G36630.1 | 61.978 | 455 | 121 | 3 | 5 | 411 | 9 | 459 | 0.0 | 516 |
| Msa1079900 | AT2G25737.1 | 45.388 | 412 | 161 | 6 | 51 | 408 | 71 | 472 | 1.97e-96 | 297 |
| Msa1079900 | AT2G25737.2 | 51.049 | 286 | 124 | 3 | 51 | 330 | 71 | 346 | 7.68e-83 | 258 |
| Msa1079900 | AT1G11540.2 | 28.472 | 288 | 184 | 6 | 1 | 279 | 1 | 275 | 1.87e-24 | 105 |
| Msa1079900 | AT4G21250.1 | 30.000 | 290 | 174 | 5 | 29 | 301 | 18 | 295 | 3.39e-24 | 104 |
| Msa1079900 | AT1G11540.1 | 30.000 | 200 | 123 | 4 | 89 | 279 | 1 | 192 | 2.48e-23 | 100 |
| Msa1079900 | AT1G61740.1 | 28.873 | 284 | 176 | 7 | 7 | 279 | 11 | 279 | 1.09e-22 | 100 |
| Msa1079900 | AT4G21260.1 | 25.831 | 391 | 216 | 12 | 27 | 389 | 30 | 374 | 1.62e-20 | 93.2 |
Find 117 sgRNAs with CRISPR-Local
Find 230 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTTCAAGGTCTTTCTTTA+AGG | 0.115168 | 7_2:+79180230 | Msa1079900:CDS |
| AGTGGTCAATTGCGAATTTC+TGG | 0.142310 | 7_2:-79179396 | None:intergenic |
| CCTATGCTTACTCTTATTAT+TGG | 0.163814 | 7_2:+79179767 | Msa1079900:CDS |
| CATGAATTTATGGGATTCTT+AGG | 0.177443 | 7_2:+79182303 | Msa1079900:CDS |
| CTATTGCACTAGTGGTATTT+TGG | 0.180174 | 7_2:+79181186 | Msa1079900:CDS |
| GATACAGAACCATGAATTTA+TGG | 0.181257 | 7_2:+79182293 | Msa1079900:CDS |
| AGAAAATTGCTTAGAATTCT+TGG | 0.183484 | 7_2:+79182076 | Msa1079900:CDS |
| TCTTAAGTGGAAAAGGATTT+TGG | 0.208098 | 7_2:+79180747 | Msa1079900:CDS |
| GCCTCAATTATTGGCTTTCT+AGG | 0.224694 | 7_2:+79179695 | Msa1079900:CDS |
| CTTGCTTTGGCCTCAATTAT+TGG | 0.227645 | 7_2:+79179686 | Msa1079900:CDS |
| AACAAAAGATGTTCCAATAT+TGG | 0.229019 | 7_2:+79179986 | Msa1079900:CDS |
| CTTACTACTTCAGGTCATTA+AGG | 0.231663 | 7_2:+79180795 | Msa1079900:CDS |
| GGCTTTCTAGGATCTGCTTT+TGG | 0.237402 | 7_2:+79179707 | Msa1079900:CDS |
| GGTTTCTTTCTTACTACTTC+AGG | 0.259142 | 7_2:+79180786 | Msa1079900:CDS |
| TGTGCACTCTGTGGAATCTT+AGG | 0.276638 | 7_2:+79181317 | Msa1079900:CDS |
| TTGTTGGATGACGCACTCTT+AGG | 0.313192 | 7_2:-79179968 | None:intergenic |
| GTTATTTATAGGTATGATAA+TGG | 0.318227 | 7_2:+79179917 | Msa1079900:intron |
| CTTCCCTTCTATAAGATTTG+TGG | 0.319559 | 7_2:+79182794 | Msa1079900:three_prime_UTR |
| CCTCTTCACAGTGTCTGTTT+TGG | 0.327724 | 7_2:+79182027 | Msa1079900:CDS |
| CACACAGATGCTACACTATT+AGG | 0.337660 | 7_2:-79182576 | None:intergenic |
| GTTGGAGGGCTACTTGGTTC+TGG | 0.338070 | 7_2:+79181347 | Msa1079900:CDS |
| TCTTCAAGGTCTTTCTTTAA+GGG | 0.338871 | 7_2:+79180231 | Msa1079900:CDS |
| GCCTAGTTGGAGACTTGCTT+TGG | 0.339589 | 7_2:+79179673 | Msa1079900:CDS |
| TATTTATTACTTGAAGGAAA+TGG | 0.343166 | 7_2:-79182474 | None:intergenic |
| GCTAAATCATAATCCAATAT+TGG | 0.345497 | 7_2:-79179999 | None:intergenic |
| TCAACCACAAATCTTATAGA+AGG | 0.349150 | 7_2:-79182798 | None:intergenic |
| CAAAATACCACTAGTGCAAT+AGG | 0.361717 | 7_2:-79181185 | None:intergenic |
| ATCATTGTATTCATCCTCTC+AGG | 0.365275 | 7_2:+79182109 | Msa1079900:CDS |
| CTATGTGGCCAATTCATTGT+TGG | 0.374115 | 7_2:+79182723 | Msa1079900:three_prime_UTR |
| TAGCTTTATTTATTACTTGA+AGG | 0.379140 | 7_2:-79182480 | None:intergenic |
| ATACAGAACCATGAATTTAT+GGG | 0.379494 | 7_2:+79182294 | Msa1079900:CDS |
| GAGGTAGAGGATGAATGTTT+TGG | 0.388535 | 7_2:-79179432 | None:intergenic |
| ATCTTAGGTGGGACCGTTGG+AGG | 0.395223 | 7_2:+79181332 | Msa1079900:CDS |
| CTAAGAATCCCATAAATTCA+TGG | 0.406431 | 7_2:-79182302 | None:intergenic |
| GTTCCAATCTTAAGTGGAAA+AGG | 0.406736 | 7_2:+79180740 | Msa1079900:CDS |
| AAGCTTCACATATACATTCC+AGG | 0.407619 | 7_2:-79181262 | None:intergenic |
| AAATGTAGCCAACAATGAAT+TGG | 0.410687 | 7_2:-79182731 | None:intergenic |
| GAGAATCGCAACGGAGAAAC+CGG | 0.412752 | 7_2:-79179459 | None:intergenic |
| AGGTCTGCAGTGTATGGTAT+TGG | 0.414722 | 7_2:+79180922 | Msa1079900:CDS |
| AAAAGCTTGTATAAATTTCA+AGG | 0.418704 | 7_2:+79182392 | Msa1079900:three_prime_UTR |
| TTGTTAATTGCAGAAAGAAA+TGG | 0.424199 | 7_2:+79180369 | Msa1079900:intron |
| TCATTGTTGGCTACATTTGA+AGG | 0.424803 | 7_2:+79182736 | Msa1079900:three_prime_UTR |
| GGGACCGTTGGAGGGCTACT+TGG | 0.428854 | 7_2:+79181341 | Msa1079900:CDS |
| TTCATCCTCTACCTCGTATC+CGG | 0.430162 | 7_2:+79179440 | Msa1079900:CDS |
| TGCAGGAATTGGAGCCTAGT+TGG | 0.435667 | 7_2:+79179660 | Msa1079900:intron |
| TTATTTATAGGTATGATAAT+GGG | 0.441362 | 7_2:+79179918 | Msa1079900:intron |
| TTTGGATAGGAACTTCTTCA+AGG | 0.444034 | 7_2:+79180217 | Msa1079900:intron |
| ACCGTTGGTGGTGTTGGTGG+TGG | 0.448909 | 7_2:+79179731 | Msa1079900:CDS |
| GGTCTGCAGTGTATGGTATT+GGG | 0.449354 | 7_2:+79180923 | Msa1079900:CDS |
| GGGAGGGAGTAACGTTGTTA+TGG | 0.452115 | 7_2:-79179352 | None:intergenic |
| GTTGGTGGTGTTGGTGGTGG+TGG | 0.454327 | 7_2:+79179734 | Msa1079900:CDS |
| ATCCTTCTTGTTGGTCAACT+AGG | 0.460286 | 7_2:-79182451 | None:intergenic |
| TACATACCTGTAAGGAGAAA+AGG | 0.464417 | 7_2:-79180947 | None:intergenic |
| TCTCCATCTCTTCAATTCCA+TGG | 0.464521 | 7_2:+79179527 | Msa1079900:CDS |
| TTTCAACCTATGCTTATGCT+TGG | 0.465503 | 7_2:+79180029 | Msa1079900:CDS |
| TATGTGAAGCTTCAATTGAA+TGG | 0.468378 | 7_2:+79181273 | Msa1079900:CDS |
| TCAGTTTCCTATTGCACTAG+TGG | 0.468918 | 7_2:+79181178 | Msa1079900:intron |
| AGGACAGTGATGAGCCAGTA+AGG | 0.475643 | 7_2:-79180086 | None:intergenic |
| TGTGGTTGACTGTTAGCTAC+TGG | 0.483360 | 7_2:+79182812 | Msa1079900:three_prime_UTR |
| TTTGGAACCGTTGGTGGTGT+TGG | 0.485288 | 7_2:+79179725 | Msa1079900:CDS |
| GGAAAGAGCAGCAGCAGACT+TGG | 0.486427 | 7_2:-79179798 | None:intergenic |
| CTTATGCTTGGTATCACTGT+TGG | 0.488422 | 7_2:+79180041 | Msa1079900:CDS |
| CAGGTGTAATTGGCATTGAA+AGG | 0.499649 | 7_2:+79182259 | Msa1079900:intron |
| TTCTCTTCTCTAGGTACCAA+CGG | 0.500513 | 7_2:-79180596 | None:intergenic |
| GGAACCGTTGGTGGTGTTGG+TGG | 0.502109 | 7_2:+79179728 | Msa1079900:CDS |
| TTTGCTAGTGCTCTCACCAT+GGG | 0.514375 | 7_2:+79182139 | Msa1079900:CDS |
| AGGAAATGGATCCTTCTTGT+TGG | 0.515190 | 7_2:-79182460 | None:intergenic |
| TTTGGTGTTAATGATTGTGT+GGG | 0.524681 | 7_2:+79180765 | Msa1079900:CDS |
| GCTTGTATAAATTTCAAGGT+AGG | 0.530853 | 7_2:+79182396 | Msa1079900:three_prime_UTR |
| GCTCCAAAACCGATAAAACT+TGG | 0.532182 | 7_2:+79179549 | Msa1079900:CDS |
| GAAAGAAGAGACTCTTCTAA+AGG | 0.532361 | 7_2:+79180266 | Msa1079900:CDS |
| CTATGAAAAGAATAATGATA+AGG | 0.533759 | 7_2:-79180106 | None:intergenic |
| GCACTCTGTGGAATCTTAGG+TGG | 0.534981 | 7_2:+79181320 | Msa1079900:CDS |
| TCAATGTTTATGTTTCTATG+TGG | 0.537008 | 7_2:+79182708 | Msa1079900:three_prime_UTR |
| CACAAATCTTATAGAAGGGA+AGG | 0.537098 | 7_2:-79182793 | None:intergenic |
| TAGAGAAGAGAAAACTCCTA+TGG | 0.538536 | 7_2:+79180607 | Msa1079900:CDS |
| GAGGATGAGTACAGGAAACC+TGG | 0.540526 | 7_2:+79181244 | Msa1079900:CDS |
| CACTCTGTGGAATCTTAGGT+GGG | 0.542197 | 7_2:+79181321 | Msa1079900:CDS |
| TACAAGAAGAGGATGAGTAC+AGG | 0.547246 | 7_2:+79181236 | Msa1079900:CDS |
| ACCACCACCAACACCACCAA+CGG | 0.547510 | 7_2:-79179732 | None:intergenic |
| TATTATCATACATACCTGTA+AGG | 0.550069 | 7_2:-79180955 | None:intergenic |
| GTCATCATATCATAAATCAC+TGG | 0.551279 | 7_2:-79182338 | None:intergenic |
| AAGGCAGCGTTGATGAATGC+TGG | 0.554316 | 7_2:+79182422 | Msa1079900:three_prime_UTR |
| ATGTCAAGGTCTGCAGTGTA+TGG | 0.557509 | 7_2:+79180916 | Msa1079900:CDS |
| GAGCCATGGAATTGAAGAGA+TGG | 0.559296 | 7_2:-79179530 | None:intergenic |
| GAGGATGAATACAATGATTG+AGG | 0.567259 | 7_2:-79182104 | None:intergenic |
| TGTGCTGCTTCAATGACTCT+AGG | 0.567982 | 7_2:-79182515 | None:intergenic |
| TCTTAGGTGGGACCGTTGGA+GGG | 0.569227 | 7_2:+79181333 | Msa1079900:CDS |
| TGGTTTGCAGAATGATGTCA+AGG | 0.570401 | 7_2:+79180902 | Msa1079900:intron |
| TCCTAGAAAGCCAATAATTG+AGG | 0.572327 | 7_2:-79179696 | None:intergenic |
| TCATTGTATTCATCCTCTCA+GGG | 0.573524 | 7_2:+79182110 | Msa1079900:CDS |
| CAACAAAAGACACAGAGGGA+GGG | 0.589945 | 7_2:-79179368 | None:intergenic |
| CAACCACAAATCTTATAGAA+GGG | 0.590107 | 7_2:-79182797 | None:intergenic |
| TACCTAGTTGACCAACAAGA+AGG | 0.590340 | 7_2:+79182449 | Msa1079900:three_prime_UTR |
| TCTTTAAGGGAACTGAGATG+TGG | 0.592420 | 7_2:+79180244 | Msa1079900:CDS |
| GGAGGGCTACTTGGTTCTGG+AGG | 0.593688 | 7_2:+79181350 | Msa1079900:CDS |
| TGACACGGAATATGATCCGT+TGG | 0.595281 | 7_2:+79180580 | Msa1079900:CDS |
| ACAACAAAAGACACAGAGGG+AGG | 0.600323 | 7_2:-79179369 | None:intergenic |
| AGAAACCGGATACGAGGTAG+AGG | 0.604035 | 7_2:-79179445 | None:intergenic |
| TGAAGCAATGAAGTTGTACA+AGG | 0.607163 | 7_2:+79181211 | Msa1079900:CDS |
| TGTACAAGGATTACAAGAAG+AGG | 0.614235 | 7_2:+79181225 | Msa1079900:CDS |
| CCAAAACAGACACTGTGAAG+AGG | 0.614270 | 7_2:-79182027 | None:intergenic |
| GCCAAAGCAAGTCTCCAACT+AGG | 0.614402 | 7_2:-79179674 | None:intergenic |
| CAACGGAGAAACCGGATACG+AGG | 0.616746 | 7_2:-79179451 | None:intergenic |
| GGAATCTTAGGTGGGACCGT+TGG | 0.618283 | 7_2:+79181329 | Msa1079900:CDS |
| TTTGGTGGAAAAGGACATAG+TGG | 0.622803 | 7_2:-79179414 | None:intergenic |
| GGACAGTGATGAGCCAGTAA+GGG | 0.622892 | 7_2:-79180085 | None:intergenic |
| AGAACCAAGTAGCCCTCCAA+CGG | 0.623795 | 7_2:-79181345 | None:intergenic |
| GTGATACCAAGCATAAGCAT+AGG | 0.629811 | 7_2:-79180035 | None:intergenic |
| CCAATAATAAGAGTAAGCAT+AGG | 0.636816 | 7_2:-79179767 | None:intergenic |
| TAAATTTCAAGGTAGGACAA+AGG | 0.643520 | 7_2:+79182403 | Msa1079900:three_prime_UTR |
| ATTGCAGAAAGAAATGGCAA+AGG | 0.644245 | 7_2:+79180375 | Msa1079900:intron |
| AACAACAACAAAAGACACAG+AGG | 0.648660 | 7_2:-79179373 | None:intergenic |
| ACAACAACAAAAGACACAGA+GGG | 0.648796 | 7_2:-79179372 | None:intergenic |
| ATATGCAGTTCTAATTGACA+CGG | 0.678566 | 7_2:+79180565 | Msa1079900:intron |
| AAGAGCGGAGAGAATCGCAA+CGG | 0.698430 | 7_2:-79179468 | None:intergenic |
| CATTGTATTCATCCTCTCAG+GGG | 0.714050 | 7_2:+79182111 | Msa1079900:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAATCTATATATATGATTT+TGG | + | chr7_2:79180882-79180901 | Msa1079900:intron | 10.0% |
| !! | TTATTTATAGGTATGATAAT+GGG | + | chr7_2:79179918-79179937 | Msa1079900:intron | 15.0% |
| !! | AAAAAGAAAAGACATATATT+CGG | - | chr7_2:79180200-79180219 | None:intergenic | 15.0% |
| !!! | ATCTATTTTCAAATTTATGT+TGG | + | chr7_2:79180444-79180463 | Msa1079900:intron | 15.0% |
| !! | AAATGAAAAATATACAAATC+TGG | + | chr7_2:79180504-79180523 | Msa1079900:intron | 15.0% |
| !!! | CAAAGAGTTAATGTTTTTAA+CGG | - | chr7_2:79179635-79179654 | None:intergenic | 20.0% |
| !! | AAAACGGAATTAATTACATT+TGG | - | chr7_2:79179822-79179841 | None:intergenic | 20.0% |
| !!! | AATTAATTCCGTTTTACATA+AGG | + | chr7_2:79179827-79179846 | Msa1079900:intron | 20.0% |
| !! | AAATGAAACCTTATGTAAAA+CGG | - | chr7_2:79179838-79179857 | None:intergenic | 20.0% |
| !!! | TTGTTGACTATGTTATTTAT+AGG | + | chr7_2:79179906-79179925 | Msa1079900:intron | 20.0% |
| !! | GTTATTTATAGGTATGATAA+TGG | + | chr7_2:79179917-79179936 | Msa1079900:intron | 20.0% |
| !! | CTATGAAAAGAATAATGATA+AGG | - | chr7_2:79180109-79180128 | None:intergenic | 20.0% |
| !!! | CTTATCATTATTCTTTTCAT+AGG | + | chr7_2:79180107-79180126 | Msa1079900:CDS | 20.0% |
| !!! | GAATATATGTCTTTTCTTTT+TGG | + | chr7_2:79180199-79180218 | Msa1079900:intron | 20.0% |
| !! | AAATTTATGTTGGATTCATT+AGG | + | chr7_2:79180454-79180473 | Msa1079900:intron | 20.0% |
| !!! | GAAGTTTTAATTAATACCAT+AGG | - | chr7_2:79180626-79180645 | None:intergenic | 20.0% |
| !! | TAAAACTTTCATCTACTTAT+TGG | + | chr7_2:79180664-79180683 | Msa1079900:intron | 20.0% |
| !! | AATTAATAGAAATAGTAGAG+AGG | - | chr7_2:79180827-79180846 | None:intergenic | 20.0% |
| !! | CAAATTGTACTTTATGAAAT+TGG | - | chr7_2:79180984-79181003 | None:intergenic | 20.0% |
| !! | ATGTAATGATGAAGTTAATT+TGG | + | chr7_2:79181018-79181037 | Msa1079900:intron | 20.0% |
| !! | TGTAATGATGAAGTTAATTT+GGG | + | chr7_2:79181019-79181038 | Msa1079900:intron | 20.0% |
| !!! | AGCTAGTATTCTTTTAAAAA+AGG | - | chr7_2:79181130-79181149 | None:intergenic | 20.0% |
| !! | AAAAGCTTGTATAAATTTCA+AGG | + | chr7_2:79182392-79182411 | Msa1079900:three_prime_UTR | 20.0% |
| !! | TATTTATTACTTGAAGGAAA+TGG | - | chr7_2:79182477-79182496 | None:intergenic | 20.0% |
| !!! | TAGCTTTATTTATTACTTGA+AGG | - | chr7_2:79182483-79182502 | None:intergenic | 20.0% |
| !!! | TTTTCTGTATTCAATAAACA+AGG | + | chr7_2:79182762-79182781 | Msa1079900:three_prime_UTR | 20.0% |
| !! | AATATTGGAACATCTTTTGT+TGG | - | chr7_2:79179987-79180006 | None:intergenic | 25.0% |
| ! | AACAAAAGATGTTCCAATAT+TGG | + | chr7_2:79179986-79180005 | Msa1079900:CDS | 25.0% |
| ! | GCTAAATCATAATCCAATAT+TGG | - | chr7_2:79180002-79180021 | None:intergenic | 25.0% |
| !! | TATGTCTTTTCTTTTTGGAT+AGG | + | chr7_2:79180204-79180223 | Msa1079900:intron | 25.0% |
| ! | TTGTTAATTGCAGAAAGAAA+TGG | + | chr7_2:79180369-79180388 | Msa1079900:intron | 25.0% |
| ! | TATACAAATCTGGATTCATA+TGG | + | chr7_2:79180514-79180533 | Msa1079900:intron | 25.0% |
| !! | TATTTTGTTCCAATCTTAAG+TGG | + | chr7_2:79180734-79180753 | Msa1079900:CDS | 25.0% |
| ! | TATTATCATACATACCTGTA+AGG | - | chr7_2:79180958-79180977 | None:intergenic | 25.0% |
| !!! | AAAGTTTAAGAGTTGATGAA+AGG | - | chr7_2:79181784-79181803 | None:intergenic | 25.0% |
| ! | GAGAACTGAGAATTAATTAA+AGG | - | chr7_2:79181830-79181849 | None:intergenic | 25.0% |
| ! | AGGACTGTATAGAAATTAAT+AGG | + | chr7_2:79181877-79181896 | Msa1079900:intron | 25.0% |
| ! | AGAAAATTGCTTAGAATTCT+TGG | + | chr7_2:79182076-79182095 | Msa1079900:CDS | 25.0% |
| ! | ATACAGAACCATGAATTTAT+GGG | + | chr7_2:79182294-79182313 | Msa1079900:CDS | 25.0% |
| !! | TCAATGTTTATGTTTCTATG+TGG | + | chr7_2:79182708-79182727 | Msa1079900:three_prime_UTR | 25.0% |
| ! | AGATGAATTTTCGTGGTAAT+TGG | - | chr7_2:79179510-79179529 | None:intergenic | 30.0% |
| ! | ATTAACTCTTTGTTTGTTGC+AGG | + | chr7_2:79179643-79179662 | Msa1079900:intron | 30.0% |
| CCAATAATAAGAGTAAGCAT+AGG | - | chr7_2:79179770-79179789 | None:intergenic | 30.0% | |
| CCTATGCTTACTCTTATTAT+TGG | + | chr7_2:79179767-79179786 | Msa1079900:CDS | 30.0% | |
| TTCTTCAAGGTCTTTCTTTA+AGG | + | chr7_2:79180230-79180249 | Msa1079900:CDS | 30.0% | |
| TCTTCAAGGTCTTTCTTTAA+GGG | + | chr7_2:79180231-79180250 | Msa1079900:CDS | 30.0% | |
| ! | ACAACTTTTGTTAATTCTCG+TGG | + | chr7_2:79180403-79180422 | Msa1079900:CDS | 30.0% |
| ! | CAACTTTTGTTAATTCTCGT+GGG | + | chr7_2:79180404-79180423 | Msa1079900:CDS | 30.0% |
| ! | AACTTTTGTTAATTCTCGTG+GGG | + | chr7_2:79180405-79180424 | Msa1079900:CDS | 30.0% |
| CAATTAGAACTGCATATTTC+AGG | - | chr7_2:79180562-79180581 | None:intergenic | 30.0% | |
| ! | ATATGCAGTTCTAATTGACA+CGG | + | chr7_2:79180565-79180584 | Msa1079900:intron | 30.0% |
| ACTTTCATCTACTTATTGGT+TGG | + | chr7_2:79180668-79180687 | Msa1079900:intron | 30.0% | |
| ! | AATCCTTTTCCACTTAAGAT+TGG | - | chr7_2:79180746-79180765 | None:intergenic | 30.0% |
| ! | TCTTAAGTGGAAAAGGATTT+TGG | + | chr7_2:79180747-79180766 | Msa1079900:CDS | 30.0% |
| !!! | TTTTGGTGTTAATGATTGTG+TGG | + | chr7_2:79180764-79180783 | Msa1079900:CDS | 30.0% |
| !! | TTTGGTGTTAATGATTGTGT+GGG | + | chr7_2:79180765-79180784 | Msa1079900:CDS | 30.0% |
| TATGTGAAGCTTCAATTGAA+TGG | + | chr7_2:79181273-79181292 | Msa1079900:CDS | 30.0% | |
| AAATTGCCTAAGTCTAAGAA+GGG | - | chr7_2:79181640-79181659 | None:intergenic | 30.0% | |
| TAAATTGCCTAAGTCTAAGA+AGG | - | chr7_2:79181641-79181660 | None:intergenic | 30.0% | |
| ! | CTTAGGCAATTTAACTTACA+AGG | + | chr7_2:79181648-79181667 | Msa1079900:intron | 30.0% |
| CTGAGAATTAATTAAAGGCA+TGG | - | chr7_2:79181825-79181844 | None:intergenic | 30.0% | |
| !! | ACTTTTTCTCTTACAAGACA+TGG | - | chr7_2:79181854-79181873 | None:intergenic | 30.0% |
| !!! | AATGCAACACTTTTTCTTTC+AGG | + | chr7_2:79182240-79182259 | Msa1079900:intron | 30.0% |
| !! | CTTTTTCTTTCAGGTGTAAT+TGG | + | chr7_2:79182249-79182268 | Msa1079900:intron | 30.0% |
| GATACAGAACCATGAATTTA+TGG | + | chr7_2:79182293-79182312 | Msa1079900:CDS | 30.0% | |
| CTAAGAATCCCATAAATTCA+TGG | - | chr7_2:79182305-79182324 | None:intergenic | 30.0% | |
| CATGAATTTATGGGATTCTT+AGG | + | chr7_2:79182303-79182322 | Msa1079900:CDS | 30.0% | |
| GTCATCATATCATAAATCAC+TGG | - | chr7_2:79182341-79182360 | None:intergenic | 30.0% | |
| GCTTGTATAAATTTCAAGGT+AGG | + | chr7_2:79182396-79182415 | Msa1079900:three_prime_UTR | 30.0% | |
| TAAATTTCAAGGTAGGACAA+AGG | + | chr7_2:79182403-79182422 | Msa1079900:three_prime_UTR | 30.0% | |
| AAATGTAGCCAACAATGAAT+TGG | - | chr7_2:79182734-79182753 | None:intergenic | 30.0% | |
| CAACCACAAATCTTATAGAA+GGG | - | chr7_2:79182800-79182819 | None:intergenic | 30.0% | |
| TCAACCACAAATCTTATAGA+AGG | - | chr7_2:79182801-79182820 | None:intergenic | 30.0% | |
| ACAACAACAAAAGACACAGA+GGG | - | chr7_2:79179375-79179394 | None:intergenic | 35.0% | |
| AACAACAACAAAAGACACAG+AGG | - | chr7_2:79179376-79179395 | None:intergenic | 35.0% | |
| !!! | GATGAATGTTTTGGTGGAAA+AGG | - | chr7_2:79179426-79179445 | None:intergenic | 35.0% |
| ! | ATTTTGTGTGAGGTAAAGAG+CGG | - | chr7_2:79179486-79179505 | None:intergenic | 35.0% |
| ! | GGTAATTGGTATTTTGTGTG+AGG | - | chr7_2:79179496-79179515 | None:intergenic | 35.0% |
| AACGTGTTGTGAGTAACATA+CGG | - | chr7_2:79179576-79179595 | None:intergenic | 35.0% | |
| ! | TCTTTGTTTGTTGCAGGAAT+TGG | + | chr7_2:79179649-79179668 | Msa1079900:intron | 35.0% |
| TCCTAGAAAGCCAATAATTG+AGG | - | chr7_2:79179699-79179718 | None:intergenic | 35.0% | |
| CAATGCTTGATTAGAAACAG+AGG | + | chr7_2:79179858-79179877 | Msa1079900:intron | 35.0% | |
| TTTCAACCTATGCTTATGCT+TGG | + | chr7_2:79180029-79180048 | Msa1079900:CDS | 35.0% | |
| !!! | TTAGTGTTGTTTTCCCTTAC+TGG | + | chr7_2:79180072-79180091 | Msa1079900:CDS | 35.0% |
| TTTGGATAGGAACTTCTTCA+AGG | + | chr7_2:79180217-79180236 | Msa1079900:intron | 35.0% | |
| GAAAGAAGAGACTCTTCTAA+AGG | + | chr7_2:79180266-79180285 | Msa1079900:CDS | 35.0% | |
| ATTGCAGAAAGAAATGGCAA+AGG | + | chr7_2:79180375-79180394 | Msa1079900:intron | 35.0% | |
| ! | ATAGGAGTTTTCTCTTCTCT+AGG | - | chr7_2:79180608-79180627 | None:intergenic | 35.0% |
| TAGAGAAGAGAAAACTCCTA+TGG | + | chr7_2:79180607-79180626 | Msa1079900:CDS | 35.0% | |
| ! | TCATCTACTTATTGGTTGGT+AGG | + | chr7_2:79180672-79180691 | Msa1079900:intron | 35.0% |
| GTTCCAATCTTAAGTGGAAA+AGG | + | chr7_2:79180740-79180759 | Msa1079900:CDS | 35.0% | |
| GGTTTCTTTCTTACTACTTC+AGG | + | chr7_2:79180786-79180805 | Msa1079900:CDS | 35.0% | |
| CTTACTACTTCAGGTCATTA+AGG | + | chr7_2:79180795-79180814 | Msa1079900:CDS | 35.0% | |
| TACATACCTGTAAGGAGAAA+AGG | - | chr7_2:79180950-79180969 | None:intergenic | 35.0% | |
| CAAAATACCACTAGTGCAAT+AGG | - | chr7_2:79181188-79181207 | None:intergenic | 35.0% | |
| ! | CTATTGCACTAGTGGTATTT+TGG | + | chr7_2:79181186-79181205 | Msa1079900:CDS | 35.0% |
| TGAAGCAATGAAGTTGTACA+AGG | + | chr7_2:79181211-79181230 | Msa1079900:CDS | 35.0% | |
| TGTACAAGGATTACAAGAAG+AGG | + | chr7_2:79181225-79181244 | Msa1079900:CDS | 35.0% | |
| AAGCTTCACATATACATTCC+AGG | - | chr7_2:79181265-79181284 | None:intergenic | 35.0% | |
| TCTATATGTACTGTACCTGA+GGG | - | chr7_2:79181418-79181437 | None:intergenic | 35.0% | |
| ! | GTCAAGCTTGGTATTTTATC+TGG | + | chr7_2:79181535-79181554 | Msa1079900:intron | 35.0% |
| CTAAGTCTAAGAAGGGATTT+CGG | - | chr7_2:79181633-79181652 | None:intergenic | 35.0% | |
| !!! | CTTACAAGGATTTTGATTGC+AGG | + | chr7_2:79181662-79181681 | Msa1079900:intron | 35.0% |
| ! | GTTTTCATCATCATTGTCTG+TGG | + | chr7_2:79181716-79181735 | Msa1079900:intron | 35.0% |
| !! | TGAAAGGTACCATAAGGAAT+GGG | - | chr7_2:79181768-79181787 | None:intergenic | 35.0% |
| !! | ATGAAAGGTACCATAAGGAA+TGG | - | chr7_2:79181769-79181788 | None:intergenic | 35.0% |
| !! | AGTTGATGAAAGGTACCATA+AGG | - | chr7_2:79181774-79181793 | None:intergenic | 35.0% |
| CTTGTAAGAGAAAAAGTGAG+AGG | + | chr7_2:79181857-79181876 | Msa1079900:intron | 35.0% | |
| GAGGATGAATACAATGATTG+AGG | - | chr7_2:79182107-79182126 | None:intergenic | 35.0% | |
| ATCATTGTATTCATCCTCTC+AGG | + | chr7_2:79182109-79182128 | Msa1079900:CDS | 35.0% | |
| TCATTGTATTCATCCTCTCA+GGG | + | chr7_2:79182110-79182129 | Msa1079900:CDS | 35.0% | |
| ! | GAATCTGATTGATTTACCCA+TGG | - | chr7_2:79182158-79182177 | None:intergenic | 35.0% |
| ! | GACCAAAAAAGTGCACATTA+TGG | + | chr7_2:79182358-79182377 | Msa1079900:three_prime_UTR | 35.0% |
| !!! | CTCCATAATGTGCACTTTTT+TGG | - | chr7_2:79182363-79182382 | None:intergenic | 35.0% |
| ! | TCATTGTTGGCTACATTTGA+AGG | + | chr7_2:79182736-79182755 | Msa1079900:three_prime_UTR | 35.0% |
| CACAAATCTTATAGAAGGGA+AGG | - | chr7_2:79182796-79182815 | None:intergenic | 35.0% | |
| CTTCCCTTCTATAAGATTTG+TGG | + | chr7_2:79182794-79182813 | Msa1079900:three_prime_UTR | 35.0% | |
| AGTGGTCAATTGCGAATTTC+TGG | - | chr7_2:79179399-79179418 | None:intergenic | 40.0% | |
| TTTGGTGGAAAAGGACATAG+TGG | - | chr7_2:79179417-79179436 | None:intergenic | 40.0% | |
| !! | GTAGAGGATGAATGTTTTGG+TGG | - | chr7_2:79179432-79179451 | None:intergenic | 40.0% |
| ! | GAGGTAGAGGATGAATGTTT+TGG | - | chr7_2:79179435-79179454 | None:intergenic | 40.0% |
| ! | GAGATGGAGATGAATTTTCG+TGG | - | chr7_2:79179517-79179536 | None:intergenic | 40.0% |
| TCTCCATCTCTTCAATTCCA+TGG | + | chr7_2:79179527-79179546 | Msa1079900:CDS | 40.0% | |
| !!! | TTTTATCGGTTTTGGAGCCA+TGG | - | chr7_2:79179547-79179566 | None:intergenic | 40.0% |
| GCTCCAAAACCGATAAAACT+TGG | + | chr7_2:79179549-79179568 | Msa1079900:CDS | 40.0% | |
| !! | ACATACGGGCCAAGTTTTAT+CGG | - | chr7_2:79179561-79179580 | None:intergenic | 40.0% |
| ACGTGTTGTGAGTAACATAC+GGG | - | chr7_2:79179575-79179594 | None:intergenic | 40.0% | |
| CTTGCTTTGGCCTCAATTAT+TGG | + | chr7_2:79179686-79179705 | Msa1079900:CDS | 40.0% | |
| !! | GCCTCAATTATTGGCTTTCT+AGG | + | chr7_2:79179695-79179714 | Msa1079900:CDS | 40.0% |
| GTGATACCAAGCATAAGCAT+AGG | - | chr7_2:79180038-79180057 | None:intergenic | 40.0% | |
| CTTATGCTTGGTATCACTGT+TGG | + | chr7_2:79180041-79180060 | Msa1079900:CDS | 40.0% | |
| ! | TCTTTAAGGGAACTGAGATG+TGG | + | chr7_2:79180244-79180263 | Msa1079900:CDS | 40.0% |
| TTCTCTTCTCTAGGTACCAA+CGG | - | chr7_2:79180599-79180618 | None:intergenic | 40.0% | |
| ! | TGGTTTGCAGAATGATGTCA+AGG | + | chr7_2:79180902-79180921 | Msa1079900:intron | 40.0% |
| CGATATAGATCACGACATCA+TGG | - | chr7_2:79181095-79181114 | None:intergenic | 40.0% | |
| TCAGTTTCCTATTGCACTAG+TGG | + | chr7_2:79181178-79181197 | Msa1079900:intron | 40.0% | |
| TACAAGAAGAGGATGAGTAC+AGG | + | chr7_2:79181236-79181255 | Msa1079900:CDS | 40.0% | |
| ! | ATTGTGTTTTGTGCACTCTG+TGG | + | chr7_2:79181308-79181327 | Msa1079900:CDS | 40.0% |
| !! | TTCTGGAGGTGGATTCATTT+TGG | + | chr7_2:79181364-79181383 | Msa1079900:intron | 40.0% |
| !! | TCTGGAGGTGGATTCATTTT+GGG | + | chr7_2:79181365-79181384 | Msa1079900:intron | 40.0% |
| CACCAATCTCAATGAGAAGA+GGG | - | chr7_2:79181391-79181410 | None:intergenic | 40.0% | |
| ACACCAATCTCAATGAGAAG+AGG | - | chr7_2:79181392-79181411 | None:intergenic | 40.0% | |
| GTCTATATGTACTGTACCTG+AGG | - | chr7_2:79181419-79181438 | None:intergenic | 40.0% | |
| ATCCAAATCCGCATGTGAAA+GGG | - | chr7_2:79181446-79181465 | None:intergenic | 40.0% | |
| AATCCAAATCCGCATGTGAA+AGG | - | chr7_2:79181447-79181466 | None:intergenic | 40.0% | |
| GGTGACCATTGAATCAAGAA+TGG | + | chr7_2:79181510-79181529 | Msa1079900:intron | 40.0% | |
| GACGTCCATTCTTGATTCAA+TGG | - | chr7_2:79181518-79181537 | None:intergenic | 40.0% | |
| GGCAATTGGTTAAGATCGAA+CGG | - | chr7_2:79181562-79181581 | None:intergenic | 40.0% | |
| TTAACCAATTGCCACTGATG+TGG | + | chr7_2:79181569-79181588 | Msa1079900:intron | 40.0% | |
| CGAAATCCCTTCTTAGACTT+AGG | + | chr7_2:79181631-79181650 | Msa1079900:intron | 40.0% | |
| TTGAATTCTACCTGCTCAAG+AGG | + | chr7_2:79181739-79181758 | Msa1079900:intron | 40.0% | |
| !! | GAAAGGTACCATAAGGAATG+GGG | - | chr7_2:79181767-79181786 | None:intergenic | 40.0% |
| CATTGTATTCATCCTCTCAG+GGG | + | chr7_2:79182111-79182130 | Msa1079900:CDS | 40.0% | |
| ! | CAGGTGTAATTGGCATTGAA+AGG | + | chr7_2:79182259-79182278 | Msa1079900:intron | 40.0% |
| TACCTAGTTGACCAACAAGA+AGG | + | chr7_2:79182449-79182468 | Msa1079900:three_prime_UTR | 40.0% | |
| ATCCTTCTTGTTGGTCAACT+AGG | - | chr7_2:79182454-79182473 | None:intergenic | 40.0% | |
| AGGAAATGGATCCTTCTTGT+TGG | - | chr7_2:79182463-79182482 | None:intergenic | 40.0% | |
| CACACAGATGCTACACTATT+AGG | - | chr7_2:79182579-79182598 | None:intergenic | 40.0% | |
| CTATGTGGCCAATTCATTGT+TGG | + | chr7_2:79182723-79182742 | Msa1079900:three_prime_UTR | 40.0% | |
| CAACAAAAGACACAGAGGGA+GGG | - | chr7_2:79179371-79179390 | None:intergenic | 45.0% | |
| ACAACAAAAGACACAGAGGG+AGG | - | chr7_2:79179372-79179391 | None:intergenic | 45.0% | |
| TTCATCCTCTACCTCGTATC+CGG | + | chr7_2:79179440-79179459 | Msa1079900:CDS | 45.0% | |
| GAGCCATGGAATTGAAGAGA+TGG | - | chr7_2:79179533-79179552 | None:intergenic | 45.0% | |
| !!! | GGGCCAAGTTTTATCGGTTT+TGG | - | chr7_2:79179555-79179574 | None:intergenic | 45.0% |
| GTTACTCACAACACGTTCTC+AGG | + | chr7_2:79179579-79179598 | Msa1079900:intron | 45.0% | |
| !!! | GGCTTTCTAGGATCTGCTTT+TGG | + | chr7_2:79179707-79179726 | Msa1079900:CDS | 45.0% |
| TTGTTGGATGACGCACTCTT+AGG | - | chr7_2:79179971-79179990 | None:intergenic | 45.0% | |
| TGACACGGAATATGATCCGT+TGG | + | chr7_2:79180580-79180599 | Msa1079900:CDS | 45.0% | |
| ATGTCAAGGTCTGCAGTGTA+TGG | + | chr7_2:79180916-79180935 | Msa1079900:CDS | 45.0% | |
| AGGTCTGCAGTGTATGGTAT+TGG | + | chr7_2:79180922-79180941 | Msa1079900:CDS | 45.0% | |
| GGTCTGCAGTGTATGGTATT+GGG | + | chr7_2:79180923-79180942 | Msa1079900:CDS | 45.0% | |
| ! | TTGGGTCCTTTTCTCCTTAC+AGG | + | chr7_2:79180941-79180960 | Msa1079900:CDS | 45.0% |
| CCACAACACAACGACAATTG+AGG | - | chr7_2:79181054-79181073 | None:intergenic | 45.0% | |
| CCTCAATTGTCGTTGTGTTG+TGG | + | chr7_2:79181051-79181070 | Msa1079900:intron | 45.0% | |
| TGTGCACTCTGTGGAATCTT+AGG | + | chr7_2:79181317-79181336 | Msa1079900:CDS | 45.0% | |
| CACTCTGTGGAATCTTAGGT+GGG | + | chr7_2:79181321-79181340 | Msa1079900:CDS | 45.0% | |
| AGACATACCCCTTTCACATG+CGG | + | chr7_2:79181435-79181454 | Msa1079900:intron | 45.0% | |
| TCCAAATCCGCATGTGAAAG+GGG | - | chr7_2:79181445-79181464 | None:intergenic | 45.0% | |
| TCAAGAATGGACGTCAAGCT+TGG | + | chr7_2:79181523-79181542 | Msa1079900:intron | 45.0% | |
| AAGGGATTTCGGTTGTGTGT+AGG | - | chr7_2:79181622-79181641 | None:intergenic | 45.0% | |
| AAGAGGTTCCCCATTCCTTA+TGG | + | chr7_2:79181756-79181775 | Msa1079900:intron | 45.0% | |
| CCAAAACAGACACTGTGAAG+AGG | - | chr7_2:79182030-79182049 | None:intergenic | 45.0% | |
| ! | CCTCTTCACAGTGTCTGTTT+TGG | + | chr7_2:79182027-79182046 | Msa1079900:CDS | 45.0% |
| !!! | TTCACAGTGTCTGTTTTGGC+TGG | + | chr7_2:79182031-79182050 | Msa1079900:CDS | 45.0% |
| !!! | TCTGTTTTGGCTGGCTTTGT+GGG | + | chr7_2:79182040-79182059 | Msa1079900:CDS | 45.0% |
| TAGCAAAAATGACCCCTGAG+AGG | - | chr7_2:79182126-79182145 | None:intergenic | 45.0% | |
| ! | TTTTGCTAGTGCTCTCACCA+TGG | + | chr7_2:79182138-79182157 | Msa1079900:CDS | 45.0% |
| TTTGCTAGTGCTCTCACCAT+GGG | + | chr7_2:79182139-79182158 | Msa1079900:CDS | 45.0% | |
| !! | TGTGCTGCTTCAATGACTCT+AGG | - | chr7_2:79182518-79182537 | None:intergenic | 45.0% |
| TGTGGTTGACTGTTAGCTAC+TGG | + | chr7_2:79182812-79182831 | Msa1079900:three_prime_UTR | 45.0% | |
| GGGAGGGAGTAACGTTGTTA+TGG | - | chr7_2:79179355-79179374 | None:intergenic | 50.0% | |
| AGAAACCGGATACGAGGTAG+AGG | - | chr7_2:79179448-79179467 | None:intergenic | 50.0% | |
| GAGAATCGCAACGGAGAAAC+CGG | - | chr7_2:79179462-79179481 | None:intergenic | 50.0% | |
| AAGAGCGGAGAGAATCGCAA+CGG | - | chr7_2:79179471-79179490 | None:intergenic | 50.0% | |
| TGCAGGAATTGGAGCCTAGT+TGG | + | chr7_2:79179660-79179679 | Msa1079900:intron | 50.0% | |
| ! | GCCTAGTTGGAGACTTGCTT+TGG | + | chr7_2:79179673-79179692 | Msa1079900:CDS | 50.0% |
| GCCAAAGCAAGTCTCCAACT+AGG | - | chr7_2:79179677-79179696 | None:intergenic | 50.0% | |
| !!! | GGATCTGCTTTTGGAACCGT+TGG | + | chr7_2:79179716-79179735 | Msa1079900:CDS | 50.0% |
| !!! | TCTGCTTTTGGAACCGTTGG+TGG | + | chr7_2:79179719-79179738 | Msa1079900:CDS | 50.0% |
| !! | TTTGGAACCGTTGGTGGTGT+TGG | + | chr7_2:79179725-79179744 | Msa1079900:CDS | 50.0% |
| GGACAGTGATGAGCCAGTAA+GGG | - | chr7_2:79180088-79180107 | None:intergenic | 50.0% | |
| AGGACAGTGATGAGCCAGTA+AGG | - | chr7_2:79180089-79180108 | None:intergenic | 50.0% | |
| GAGGATGAGTACAGGAAACC+TGG | + | chr7_2:79181244-79181263 | Msa1079900:CDS | 50.0% | |
| GCACTCTGTGGAATCTTAGG+TGG | + | chr7_2:79181320-79181339 | Msa1079900:CDS | 50.0% | |
| AGAACCAAGTAGCCCTCCAA+CGG | - | chr7_2:79181348-79181367 | None:intergenic | 50.0% | |
| GGCCCTCTTCTCATTGAGAT+TGG | + | chr7_2:79181386-79181405 | Msa1079900:intron | 50.0% | |
| !! | TGAGATTGGTGTCATCCCTC+AGG | + | chr7_2:79181400-79181419 | Msa1079900:intron | 50.0% |
| ACCCCTTTCACATGCGGATT+TGG | + | chr7_2:79181441-79181460 | Msa1079900:intron | 50.0% | |
| AGCTAGGTGCGTGACTGTAT+GGG | - | chr7_2:79181485-79181504 | None:intergenic | 50.0% | |
| TAGCTAGGTGCGTGACTGTA+TGG | - | chr7_2:79181486-79181505 | None:intergenic | 50.0% | |
| AGTCACGCACCTAGCTACAT+CGG | + | chr7_2:79181489-79181508 | Msa1079900:intron | 50.0% | |
| CAATGGTCACCGATGTAGCT+AGG | - | chr7_2:79181501-79181520 | None:intergenic | 50.0% | |
| TCAGCCACATCAGTGGCAAT+TGG | - | chr7_2:79181576-79181595 | None:intergenic | 50.0% | |
| !!! | GTCTGTTTTGGCTGGCTTTG+TGG | + | chr7_2:79182039-79182058 | Msa1079900:CDS | 50.0% |
| !! | AAGGCAGCGTTGATGAATGC+TGG | + | chr7_2:79182422-79182441 | Msa1079900:three_prime_UTR | 50.0% |
| CAACGGAGAAACCGGATACG+AGG | - | chr7_2:79179454-79179473 | None:intergenic | 55.0% | |
| ACCACCACCAACACCACCAA+CGG | - | chr7_2:79179735-79179754 | None:intergenic | 55.0% | |
| GGAAAGAGCAGCAGCAGACT+TGG | - | chr7_2:79179801-79179820 | None:intergenic | 55.0% | |
| GGAATCTTAGGTGGGACCGT+TGG | + | chr7_2:79181329-79181348 | Msa1079900:CDS | 55.0% | |
| ATCTTAGGTGGGACCGTTGG+AGG | + | chr7_2:79181332-79181351 | Msa1079900:CDS | 55.0% | |
| TCTTAGGTGGGACCGTTGGA+GGG | + | chr7_2:79181333-79181352 | Msa1079900:CDS | 55.0% | |
| GTTGGAGGGCTACTTGGTTC+TGG | + | chr7_2:79181347-79181366 | Msa1079900:CDS | 55.0% | |
| GAATGGGGAACCTCTTGAGC+AGG | - | chr7_2:79181752-79181771 | None:intergenic | 55.0% | |
| !! | GGAACCGTTGGTGGTGTTGG+TGG | + | chr7_2:79179728-79179747 | Msa1079900:CDS | 60.0% |
| !! | ACCGTTGGTGGTGTTGGTGG+TGG | + | chr7_2:79179731-79179750 | Msa1079900:CDS | 60.0% |
| !! | GTTGGTGGTGTTGGTGGTGG+TGG | + | chr7_2:79179734-79179753 | Msa1079900:CDS | 60.0% |
| !! | GGAGGGCTACTTGGTTCTGG+AGG | + | chr7_2:79181350-79181369 | Msa1079900:CDS | 60.0% |
| !! | GGGCTACTTGGTTCTGGAGG+TGG | + | chr7_2:79181353-79181372 | Msa1079900:intron | 60.0% |
| CACGCAGTCAGCCACATCAG+TGG | - | chr7_2:79181583-79181602 | None:intergenic | 60.0% | |
| GGGACCGTTGGAGGGCTACT+TGG | + | chr7_2:79181341-79181360 | Msa1079900:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 79179334 | 79182844 | 79179334 | ID=Msa1079900;Name=Msa1079900 |
| chr7_2 | mRNA | 79179334 | 79182844 | 79179334 | ID=Msa1079900-mRNA-1;Parent=Msa1079900;Name=Msa1079900-mRNA-1;_AED=0.10;_eAED=0.10;_QI=85|0.9|0.90|1|1|1|11|500|411 |
| chr7_2 | exon | 79179334 | 79179574 | 79179334 | ID=Msa1079900-mRNA-1:exon:19878;Parent=Msa1079900-mRNA-1 |
| chr7_2 | exon | 79179665 | 79179824 | 79179665 | ID=Msa1079900-mRNA-1:exon:19879;Parent=Msa1079900-mRNA-1 |
| chr7_2 | exon | 79179928 | 79180128 | 79179928 | ID=Msa1079900-mRNA-1:exon:19880;Parent=Msa1079900-mRNA-1 |
| chr7_2 | exon | 79180226 | 79180287 | 79180226 | ID=Msa1079900-mRNA-1:exon:19881;Parent=Msa1079900-mRNA-1 |
| chr7_2 | exon | 79180382 | 79180430 | 79180382 | ID=Msa1079900-mRNA-1:exon:19882;Parent=Msa1079900-mRNA-1 |
| chr7_2 | exon | 79180573 | 79180628 | 79180573 | ID=Msa1079900-mRNA-1:exon:19883;Parent=Msa1079900-mRNA-1 |
| chr7_2 | exon | 79180730 | 79180816 | 79180730 | ID=Msa1079900-mRNA-1:exon:19884;Parent=Msa1079900-mRNA-1 |
| chr7_2 | exon | 79180912 | 79180962 | 79180912 | ID=Msa1079900-mRNA-1:exon:19885;Parent=Msa1079900-mRNA-1 |
| chr7_2 | exon | 79181182 | 79181371 | 79181182 | ID=Msa1079900-mRNA-1:exon:19886;Parent=Msa1079900-mRNA-1 |
| chr7_2 | exon | 79182020 | 79182160 | 79182020 | ID=Msa1079900-mRNA-1:exon:19887;Parent=Msa1079900-mRNA-1 |
| chr7_2 | exon | 79182262 | 79182844 | 79182262 | ID=Msa1079900-mRNA-1:exon:19888;Parent=Msa1079900-mRNA-1 |
| chr7_2 | five_prime_UTR | 79179334 | 79179418 | 79179334 | ID=Msa1079900-mRNA-1:five_prime_utr;Parent=Msa1079900-mRNA-1 |
| chr7_2 | CDS | 79179419 | 79179574 | 79179419 | ID=Msa1079900-mRNA-1:cds;Parent=Msa1079900-mRNA-1 |
| chr7_2 | CDS | 79179665 | 79179824 | 79179665 | ID=Msa1079900-mRNA-1:cds;Parent=Msa1079900-mRNA-1 |
| chr7_2 | CDS | 79179928 | 79180128 | 79179928 | ID=Msa1079900-mRNA-1:cds;Parent=Msa1079900-mRNA-1 |
| chr7_2 | CDS | 79180226 | 79180287 | 79180226 | ID=Msa1079900-mRNA-1:cds;Parent=Msa1079900-mRNA-1 |
| chr7_2 | CDS | 79180382 | 79180430 | 79180382 | ID=Msa1079900-mRNA-1:cds;Parent=Msa1079900-mRNA-1 |
| chr7_2 | CDS | 79180573 | 79180628 | 79180573 | ID=Msa1079900-mRNA-1:cds;Parent=Msa1079900-mRNA-1 |
| chr7_2 | CDS | 79180730 | 79180816 | 79180730 | ID=Msa1079900-mRNA-1:cds;Parent=Msa1079900-mRNA-1 |
| chr7_2 | CDS | 79180912 | 79180962 | 79180912 | ID=Msa1079900-mRNA-1:cds;Parent=Msa1079900-mRNA-1 |
| chr7_2 | CDS | 79181182 | 79181371 | 79181182 | ID=Msa1079900-mRNA-1:cds;Parent=Msa1079900-mRNA-1 |
| chr7_2 | CDS | 79182020 | 79182160 | 79182020 | ID=Msa1079900-mRNA-1:cds;Parent=Msa1079900-mRNA-1 |
| chr7_2 | CDS | 79182262 | 79182344 | 79182262 | ID=Msa1079900-mRNA-1:cds;Parent=Msa1079900-mRNA-1 |
| chr7_2 | three_prime_UTR | 79182345 | 79182844 | 79182345 | ID=Msa1079900-mRNA-1:three_prime_utr;Parent=Msa1079900-mRNA-1 |
| Gene Sequence |
| Protein sequence |
