AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1085610


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1085610 MtrunA17_Chr8g0393311 98.711 388 5 0 1 388 1 388 0.0 790
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1085610 AT1G48420.1 72.441 381 105 0 8 388 21 401 0.0 573
Msa1085610 AT1G48420.2 72.441 381 105 0 8 388 21 401 0.0 573
Msa1085610 AT1G48420.3 72.441 381 105 0 8 388 21 401 0.0 573
Msa1085610 AT3G26115.1 22.849 337 203 11 62 356 91 412 6.66e-11 63.9
Msa1085610 AT3G26115.3 22.849 337 203 11 62 356 8 329 7.78e-11 63.5
Msa1085610 AT3G26115.2 22.849 337 203 11 62 356 8 329 7.78e-11 63.5

Find 129 sgRNAs with CRISPR-Local

Find 599 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTAATTTAAATCATATTTA+TGG 0.095345 7_2:+86403218 None:intergenic
TTCCTTCCTTCCCATTTCTT+TGG 0.168403 7_2:+86403602 None:intergenic
CTGAAGCGCGACGATCTTTC+TGG 0.194591 7_2:-86411189 Msa1085610:CDS
AATTTGTGAATATTCTTCTT+TGG 0.263261 7_2:+86410909 None:intergenic
AGACATAAATGCAAACAATA+AGG 0.291586 7_2:+86403424 None:intergenic
AAAGAAGAATATTCACAAAT+TGG 0.296772 7_2:-86410907 Msa1085610:CDS
TTATGAGAATTGATGTAATA+AGG 0.298430 7_2:+86403284 None:intergenic
GTACATACAGGTGGCCTCTT+AGG 0.303821 7_2:-86403569 Msa1085610:CDS
TGGGTTCCTTTGTGGGGAAT+TGG 0.314828 7_2:-86403523 Msa1085610:CDS
GCTGATTCTGTTATTACAAT+TGG 0.315186 7_2:-86411099 Msa1085610:CDS
CTAATTTAAATCATATTTAT+GGG 0.316825 7_2:+86403219 None:intergenic
GCTTAGAAGTGCGGAGTATA+AGG 0.324616 7_2:+86411010 None:intergenic
TGGAAACAAAGTGCGGAAAT+TGG 0.338825 7_2:-86411154 Msa1085610:CDS
CACAATTGCCGGTTTAGCAC+TGG 0.344641 7_2:-86405730 Msa1085610:CDS
CTTCTTGTTGAGCGTTTGAT+TGG 0.348706 7_2:-86410952 Msa1085610:CDS
GGGGCTACATAGAGGCAGTT+AGG 0.350018 7_2:-86406177 Msa1085610:CDS
AGCCACACTTCTGTATTTGC+TGG 0.350872 7_2:+86411210 None:intergenic
GATCAGCTGGGTTCCTTTGT+GGG 0.353254 7_2:-86403530 Msa1085610:CDS
TGAATGAAAATCCAAAGAAA+TGG 0.354272 7_2:-86403613 Msa1085610:CDS
CTTTCCAATTCCATCTTGCC+TGG 0.356939 7_2:+86403472 None:intergenic
CGATCAGCTGGGTTCCTTTG+TGG 0.368488 7_2:-86403531 Msa1085610:CDS
TAAATTAGAGATTTAATCCT+AGG 0.373773 7_2:-86403204 Msa1085610:three_prime_UTR
TGCTTACAGGCCAAGGGTCT+TGG 0.379002 7_2:-86405242 Msa1085610:intron
AGATTGAGACTTAAACCTTC+AGG 0.397047 7_2:+86403143 None:intergenic
TGCCAGTGAGGGTGGGATCT+TGG 0.400276 7_2:+86410977 None:intergenic
GTTCCCAGGCAAGATGGAAT+TGG 0.402849 7_2:-86403476 Msa1085610:CDS
GCGGAAATTGGAGTTCTTGA+TGG 0.407020 7_2:-86411142 Msa1085610:CDS
TCTGTATTTGCTGGCAGGTT+CGG 0.409436 7_2:+86411219 None:intergenic
ACAAAGTTGTGGAAGTAATC+CGG 0.413991 7_2:+86405575 None:intergenic
GACATAAATGCAAACAATAA+GGG 0.416132 7_2:+86403425 None:intergenic
TGATGAACCCAGTGCTAAAC+CGG 0.425541 7_2:+86405722 None:intergenic
TACTTCCACAACTTTGTTCA+AGG 0.425604 7_2:-86405569 Msa1085610:CDS
TATGAGAAGGTATGGGGTCT+AGG 0.430799 7_2:+86411289 None:intergenic
GTTCTTTCTCTTTCACCTGA+AGG 0.443293 7_2:-86403158 Msa1085610:three_prime_UTR
AGATACAATATGAGAAGGTA+TGG 0.444228 7_2:+86411281 None:intergenic
GGGCTACATAGAGGCAGTTA+GGG 0.449619 7_2:-86406176 Msa1085610:CDS
TAACATATGGCCTCCTCCCT+TGG 0.454510 7_2:+86410755 None:intergenic
CTTCTTTGGATATAAGTTGA+AGG 0.456772 7_2:+86410923 None:intergenic
ACAATTGCCGGTTTAGCACT+GGG 0.459037 7_2:-86405729 Msa1085610:CDS
AGAGAGTTTGATCCGCCAAC+AGG 0.462134 7_2:+86410730 None:intergenic
TTTGTTCAAGGCTTGCTTGA+CGG 0.462516 7_2:-86405557 Msa1085610:CDS
ACACTTCTGTATTTGCTGGC+AGG 0.463369 7_2:+86411214 None:intergenic
TGTGAATCGGAGTCGGAAGA+TGG 0.463540 7_2:+86411253 None:intergenic
TTGTTCTTGACCCGGTATAC+AGG 0.463568 7_2:-86405157 Msa1085610:intron
TCGAATAAATACCTGTATAC+CGG 0.463817 7_2:+86405146 None:intergenic
GTATGACAAGGTCGATCAGC+TGG 0.464943 7_2:-86403543 Msa1085610:CDS
AGCCATACACAGCTCCTTCA+TGG 0.465709 7_2:-86411320 Msa1085610:CDS
GAATGAAAATCCAAAGAAAT+GGG 0.478205 7_2:-86403612 Msa1085610:CDS
AGTTTATCATGTAAAATCCT+AGG 0.487547 7_2:+86403187 None:intergenic
GACCAAGATCCCACCCTCAC+TGG 0.487961 7_2:-86410979 Msa1085610:CDS
ATATTGTTGTGGCTTGTGGC+AGG 0.488200 7_2:-86406105 Msa1085610:intron
CCATATGTTATTCCTGTTGG+CGG 0.489575 7_2:-86410742 Msa1085610:CDS
AAAGAAGTTGCTGAAGCTAC+AGG 0.491243 7_2:-86405182 Msa1085610:CDS
GATTCTGTTATTACAATTGG+AGG 0.492732 7_2:-86411096 Msa1085610:CDS
AGAAGGTATGGGGTCTAGGT+AGG 0.496529 7_2:+86411293 None:intergenic
TTTATTCCTTCTCAGCGGTA+AGG 0.497920 7_2:-86403660 Msa1085610:intron
CCGCCAACAGGAATAACATA+TGG 0.503502 7_2:+86410742 None:intergenic
AAGATCCTCTTCGTACATAC+AGG 0.505875 7_2:-86403581 Msa1085610:CDS
CATTGCATAGCCAAGACCCT+TGG 0.507444 7_2:+86405232 None:intergenic
TCTCATACTATACATCCTCT+TGG 0.507451 7_2:+86403383 None:intergenic
AGGCCATATGTTATTCCTGT+TGG 0.513249 7_2:-86410745 Msa1085610:CDS
GCCCATGAAGGAGCTGTGTA+TGG 0.513916 7_2:+86411318 None:intergenic
GGAAGCTTCCATCTGTGAAT+CGG 0.515135 7_2:+86411240 None:intergenic
CAAGTCTCAACAGTGATGGC+GGG 0.516623 7_2:-86411363 Msa1085610:CDS
ATCCAAAGAAATGGGAAGGA+AGG 0.517188 7_2:-86403604 Msa1085610:CDS
CAAAGTTGTGGAAGTAATCC+GGG 0.521477 7_2:+86405576 None:intergenic
GATACAATATGAGAAGGTAT+GGG 0.525600 7_2:+86411282 None:intergenic
GAATCTGTTCCCAGGCAAGA+TGG 0.526272 7_2:-86403482 Msa1085610:CDS
AAGAAGATTGCCAGTGAGGG+TGG 0.528089 7_2:+86410969 None:intergenic
CCTTGTCATACAATCCTAAG+AGG 0.528394 7_2:+86403555 None:intergenic
AGCTCATCAACCAAGGGAGG+AGG 0.529265 7_2:-86410765 Msa1085610:CDS
TTTCCAATTCCATCTTGCCT+GGG 0.529547 7_2:+86403473 None:intergenic
TTGCTTGACGGACTCAAAGC+TGG 0.530861 7_2:-86405545 Msa1085610:CDS
CATTGAGTAGCTTGAAAGCA+AGG 0.540202 7_2:-86405701 Msa1085610:CDS
TGTAATTGTAATGAAATGTA+TGG 0.542665 7_2:-86411399 Msa1085610:exon
TGGCACGACAGTGATTACTT+TGG 0.547420 7_2:+86411070 None:intergenic
GATGATATTGTTGTGGCTTG+TGG 0.554768 7_2:-86406109 Msa1085610:CDS
GTGAATCGGAGTCGGAAGAT+GGG 0.555114 7_2:+86411254 None:intergenic
TTTATGGGAGTGATGATTGT+GGG 0.556296 7_2:+86403234 None:intergenic
ATTCTCCGTTTGTGATGACC+CGG 0.556941 7_2:-86405594 Msa1085610:CDS
GTAATCCGGGTCATCACAAA+CGG 0.557799 7_2:+86405589 None:intergenic
GATCAAACTCTCTCGGAACA+TGG 0.558246 7_2:-86410720 Msa1085610:intron
ATCAGCTGGGTTCCTTTGTG+GGG 0.558594 7_2:-86403529 Msa1085610:CDS
CTTTCTGGAATGCAATTGAG+TGG 0.561261 7_2:-86411174 Msa1085610:CDS
CGAATAAATACCTGTATACC+GGG 0.563504 7_2:+86405147 None:intergenic
TCTACTCAGGGGCTACATAG+AGG 0.565560 7_2:-86406185 Msa1085610:intron
AACAAGAAGATTGCCAGTGA+GGG 0.566617 7_2:+86410966 None:intergenic
TACAGGTGTTGTTCTTGACC+CGG 0.568201 7_2:-86405165 Msa1085610:CDS
GCCATACACAGCTCCTTCAT+GGG 0.568763 7_2:-86411319 Msa1085610:CDS
TTCCATCTGTGAATCGGAGT+CGG 0.579716 7_2:+86411246 None:intergenic
GAAAATCCAAAGAAATGGGA+AGG 0.581955 7_2:-86403608 Msa1085610:CDS
TTCCGACTCCGATTCACAGA+TGG 0.583626 7_2:-86411248 Msa1085610:CDS
GCAAGTCTCAACAGTGATGG+CGG 0.587381 7_2:-86411364 Msa1085610:CDS
GCAAGCCTTGAACAAAGTTG+TGG 0.588520 7_2:+86405564 None:intergenic
TGTGGGGAATTGGCAACGAA+TGG 0.595485 7_2:-86403513 Msa1085610:CDS
GTTGGCGGATCAAACTCTCT+CGG 0.600283 7_2:-86410727 Msa1085610:CDS
TTTAACTGCTTACAGGCCAA+GGG 0.601343 7_2:-86405248 Msa1085610:intron
AGCGGATTCAGCAATTGCAT+CGG 0.601538 7_2:+86411119 None:intergenic
TCTAGGTAGGATGCCCATGA+AGG 0.602506 7_2:+86411306 None:intergenic
ATGTTAATGAATCTGTTCCC+AGG 0.603513 7_2:-86403490 Msa1085610:CDS
CAACAAGAAGATTGCCAGTG+AGG 0.606515 7_2:+86410965 None:intergenic
AAAGAAAAGCTCATCAACCA+AGG 0.607592 7_2:-86410772 Msa1085610:CDS
GAAGCAAGTCTCAACAGTGA+TGG 0.607865 7_2:-86411367 Msa1085610:CDS
AGAATTGATGTAATAAGGTG+AGG 0.614054 7_2:+86403289 None:intergenic
TAAATATATCTTGCTCCAAG+AGG 0.616763 7_2:-86403398 Msa1085610:three_prime_UTR
ATTTATGGGAGTGATGATTG+TGG 0.620301 7_2:+86403233 None:intergenic
CAAGTTTGATGATATTGTTG+TGG 0.625508 7_2:-86406116 Msa1085610:CDS
GCAAGAGATACAATATGAGA+AGG 0.625884 7_2:+86411276 None:intergenic
TATGACAAGGTCGATCAGCT+GGG 0.626866 7_2:-86403542 Msa1085610:CDS
AGGTGAAAGAGAAAGAACCT+AGG 0.627318 7_2:+86403163 None:intergenic
AGAAGATTGCCAGTGAGGGT+GGG 0.629815 7_2:+86410970 None:intergenic
ATTCAAATACTTAGCAGCAA+CGG 0.630168 7_2:+86411044 None:intergenic
CTATGCAATGAACACTTCTG+AGG 0.630985 7_2:-86405219 Msa1085610:CDS
ATACTTAGCAGCAACGGCAG+TGG 0.635268 7_2:+86411050 None:intergenic
ATTGAGTAGCTTGAAAGCAA+GGG 0.638253 7_2:-86405700 Msa1085610:intron
ATTGAGCTGCAGATTCAAAG+TGG 0.643773 7_2:-86406151 Msa1085610:CDS
AAAAGCTCATCAACCAAGGG+AGG 0.644593 7_2:-86410768 Msa1085610:CDS
CAACGAGATGCTTAGAAGTG+CGG 0.644777 7_2:+86411001 None:intergenic
AAGAAAAGCTCATCAACCAA+GGG 0.645910 7_2:-86410771 Msa1085610:CDS
ATCCTCTTCGTACATACAGG+TGG 0.648696 7_2:-86403578 Msa1085610:CDS
AATTGTAATAACAGAATCAG+CGG 0.651486 7_2:+86411101 None:intergenic
CCTCTTAGGATTGTATGACA+AGG 0.657121 7_2:-86403555 Msa1085610:CDS
GAAGTGCGGAGTATAAGGAA+AGG 0.661921 7_2:+86411015 None:intergenic
AAGTCTCAACAGTGATGGCG+GGG 0.666775 7_2:-86411362 Msa1085610:CDS
GGCCACCTGTATGTACGAAG+AGG 0.673188 7_2:+86403576 None:intergenic
TGCCAGCAAATACAGAAGTG+TGG 0.675881 7_2:-86411212 Msa1085610:CDS
ATACAATATGAGAAGGTATG+GGG 0.676303 7_2:+86411283 None:intergenic
TCGTTGCCAATTCCCCACAA+AGG 0.683550 7_2:+86403517 None:intergenic
AATTGAGTGGAAACAAAGTG+CGG 0.729797 7_2:-86411161 Msa1085610:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTAATTTTTGTATTTGAT+TGG - chr7_2:86406626-86406645 Msa1085610:intron 10.0%
!! TAATATAAAAAATCAAGATT+TGG - chr7_2:86408503-86408522 Msa1085610:intron 10.0%
!!! TTATTATTTACATTTTGTTT+AGG + chr7_2:86409861-86409880 None:intergenic 10.0%
!!! TTTTTTTGACAAAAAATTAT+AGG - chr7_2:86410033-86410052 Msa1085610:intron 10.0%
!!! TATTATATTTGTTATATTGT+TGG + chr7_2:86410312-86410331 None:intergenic 10.0%
!! CTAATTTAAATCATATTTAT+GGG + chr7_2:86411204-86411223 None:intergenic 10.0%
!! TCTAATTTAAATCATATTTA+TGG + chr7_2:86411205-86411224 None:intergenic 10.0%
!! AAAAGAAAAAAAAATAAAGA+AGG + chr7_2:86411353-86411372 None:intergenic 10.0%
!! AATTGAGTAAAAACTTATAT+GGG + chr7_2:86403951-86403970 None:intergenic 15.0%
!! GCATTAAAAGATAAAATTTA+AGG + chr7_2:86404344-86404363 None:intergenic 15.0%
!! ATGTATTTGAAAATTATCAA+TGG + chr7_2:86405548-86405567 None:intergenic 15.0%
!!! AATTTCAACGTTTTATAAAA+AGG + chr7_2:86406355-86406374 None:intergenic 15.0%
!! TTTGTCAAAAATAAAAATAG+TGG - chr7_2:86406569-86406588 Msa1085610:intron 15.0%
!! AATTTATATAGCTATTTAAC+CGG + chr7_2:86406815-86406834 None:intergenic 15.0%
!! TTTGAAAACATAGTAAATAA+TGG + chr7_2:86407577-86407596 None:intergenic 15.0%
!!! TTTTCGAGTATAAAAATATT+AGG + chr7_2:86407869-86407888 None:intergenic 15.0%
!!! TATTTTTATACTCGAAAAAT+TGG - chr7_2:86407871-86407890 Msa1085610:intron 15.0%
!! TTCTTTGTATTTATTGTAAT+AGG + chr7_2:86408189-86408208 None:intergenic 15.0%
!! CAATAAAATATAAACATGTA+GGG + chr7_2:86409686-86409705 None:intergenic 15.0%
!! ACAATAAAATATAAACATGT+AGG + chr7_2:86409687-86409706 None:intergenic 15.0%
!! CAAAAGAATAAAATTATAGA+AGG - chr7_2:86409983-86410002 Msa1085610:intron 15.0%
!!! ATGTTAGCTTTTTTTTTTAA+AGG - chr7_2:86410071-86410090 Msa1085610:intron 15.0%
!! ATTTCATCTATAAAGAAAAT+AGG + chr7_2:86410437-86410456 None:intergenic 15.0%
!!! TTTTTTTTTATAATAGCCAA+TGG + chr7_2:86410462-86410481 None:intergenic 15.0%
!! ACCATTAGATTAAAAATAAA+TGG - chr7_2:86411083-86411102 Msa1085610:CDS 15.0%
!!! ACCATTTATTTTTAATCTAA+TGG + chr7_2:86411087-86411106 None:intergenic 15.0%
!! TGTAATTGTAATGAAATGTA+TGG - chr7_2:86403021-86403040 Msa1085610:three_prime_UTR 20.0%
!! AATTTGTGAATATTCTTCTT+TGG + chr7_2:86403514-86403533 None:intergenic 20.0%
!! AAAGAAGAATATTCACAAAT+TGG - chr7_2:86403513-86403532 Msa1085610:CDS 20.0%
!! AACAAGATAAAATTGAAAAG+AGG + chr7_2:86403848-86403867 None:intergenic 20.0%
!! CAATTGAGTAAAAACTTATA+TGG + chr7_2:86403952-86403971 None:intergenic 20.0%
!!! ACTTAAAACTCAATGTATTT+TGG - chr7_2:86404415-86404434 Msa1085610:intron 20.0%
!!! CACTTATCATTGTATTTTTT+AGG + chr7_2:86404644-86404663 None:intergenic 20.0%
!! ACAATTTGTAATTTGAATGA+AGG - chr7_2:86404785-86404804 Msa1085610:intron 20.0%
!! ATACCATAATAATGAATACT+TGG - chr7_2:86404859-86404878 Msa1085610:intron 20.0%
!! AGTGTAAAATACTTAAGTAT+GGG - chr7_2:86405342-86405361 Msa1085610:intron 20.0%
!!! TTGTTCGGTTTTTTTTTTTT+TGG - chr7_2:86406076-86406095 Msa1085610:intron 20.0%
!!! TTTTTTTTGGAACATAAACA+AGG - chr7_2:86406089-86406108 Msa1085610:intron 20.0%
!!! TTTTTTTGGAACATAAACAA+GGG - chr7_2:86406090-86406109 Msa1085610:intron 20.0%
!! TCAATAGATTAAATTTGACT+CGG - chr7_2:86406663-86406682 Msa1085610:intron 20.0%
!!! ATATTTTTTCACATGATATC+AGG + chr7_2:86407290-86407309 None:intergenic 20.0%
!!! GTTTTTAAAAGTTGATATCA+TGG + chr7_2:86407645-86407664 None:intergenic 20.0%
!! GTATAAAAATATTAGGATGT+TGG + chr7_2:86407862-86407881 None:intergenic 20.0%
!! TGATTAAATTATTCTACTCA+GGG - chr7_2:86408223-86408242 Msa1085610:intron 20.0%
!!! CATAAAATCTGCATTTTTAA+TGG - chr7_2:86409926-86409945 Msa1085610:intron 20.0%
!! AAAACGCTAGTTAAAAATAA+TGG + chr7_2:86410104-86410123 None:intergenic 20.0%
!!! ATTATTTTTAACTAGCGTTT+TGG - chr7_2:86410103-86410122 Msa1085610:intron 20.0%
!!! AATTTGCTTAAGTGTATAAT+TGG - chr7_2:86410385-86410404 Msa1085610:intron 20.0%
!!! GCTTGAGATTATTTATTTTT+AGG - chr7_2:86410543-86410562 Msa1085610:intron 20.0%
!! ACTATATAAAACTTGCATTT+GGG + chr7_2:86410606-86410625 None:intergenic 20.0%
!! AACTATATAAAACTTGCATT+TGG + chr7_2:86410607-86410626 None:intergenic 20.0%
!! CCTAAATTTCTTATAAATGA+TGG + chr7_2:86410631-86410650 None:intergenic 20.0%
!! CCATCATTTATAAGAAATTT+AGG - chr7_2:86410628-86410647 Msa1085610:intron 20.0%
!!! TATTTTTAATCTAATGGTTG+AGG + chr7_2:86411081-86411100 None:intergenic 20.0%
!! TTATGAGAATTGATGTAATA+AGG + chr7_2:86411139-86411158 None:intergenic 20.0%
!! TAAATTAGAGATTTAATCCT+AGG - chr7_2:86411216-86411235 Msa1085610:CDS 20.0%
! AATTGTAATAACAGAATCAG+CGG + chr7_2:86403322-86403341 None:intergenic 25.0%
! AAAAGAGGTAAATAATGATG+TGG + chr7_2:86403833-86403852 None:intergenic 25.0%
! TCAAAATTGATGCAAAAGAA+TGG + chr7_2:86403878-86403897 None:intergenic 25.0%
!! TCAATTTTGAATTTCACTCT+AGG - chr7_2:86403888-86403907 Msa1085610:intron 25.0%
!! CAATTTTGAATTTCACTCTA+GGG - chr7_2:86403889-86403908 Msa1085610:intron 25.0%
!!! TATTATCTTTTGTTGTCTCT+GGG + chr7_2:86404091-86404110 None:intergenic 25.0%
!!! TTATTATCTTTTGTTGTCTC+TGG + chr7_2:86404092-86404111 None:intergenic 25.0%
!! AGACAAATGTGAAAACTTTT+CGG + chr7_2:86404118-86404137 None:intergenic 25.0%
!! AAAGTTTTCACATTTGTCTT+TGG - chr7_2:86404119-86404138 Msa1085610:intron 25.0%
! AGTTGCTAAAATAAGTCTTA+TGG + chr7_2:86404381-86404400 None:intergenic 25.0%
!!! ATGTATTTTGGTAAAAACGA+AGG - chr7_2:86404427-86404446 Msa1085610:intron 25.0%
!!! CGAACATATTTTTCAGAAAA+TGG - chr7_2:86404458-86404477 Msa1085610:intron 25.0%
!!! ACATATTTTTCAGAAAATGG+AGG - chr7_2:86404461-86404480 Msa1085610:intron 25.0%
! AATAGAGCTGTTAAAGAAAA+AGG + chr7_2:86404602-86404621 None:intergenic 25.0%
! TATTATGTTATTAGAGAGTG+TGG - chr7_2:86404751-86404770 Msa1085610:intron 25.0%
!! ATTATGTTATTAGAGAGTGT+GGG - chr7_2:86404752-86404771 Msa1085610:intron 25.0%
! ATTCATTATTATGGTATTGC+TGG + chr7_2:86404856-86404875 None:intergenic 25.0%
! ACTCCAAGTATTCATTATTA+TGG + chr7_2:86404865-86404884 None:intergenic 25.0%
! AAAACAATGTATATGATCAG+TGG - chr7_2:86404899-86404918 Msa1085610:intron 25.0%
! AACAAGATACAAGATACAAA+AGG - chr7_2:86405012-86405031 Msa1085610:intron 25.0%
! AATAATTCACCAAACTACAT+AGG + chr7_2:86405168-86405187 None:intergenic 25.0%
! CAGTGTAAAATACTTAAGTA+TGG - chr7_2:86405341-86405360 Msa1085610:intron 25.0%
!!! TATTCTGAGTTACTTTTTGT+GGG + chr7_2:86405768-86405787 None:intergenic 25.0%
!!! ATATTCTGAGTTACTTTTTG+TGG + chr7_2:86405769-86405788 None:intergenic 25.0%
!! AGAAAACTTGGAAAATTTTG+TGG - chr7_2:86405820-86405839 Msa1085610:intron 25.0%
!!! TACAAGCAAGTGTAATTTTT+TGG + chr7_2:86406520-86406539 None:intergenic 25.0%
! TTTAGAGAATTCAACATTGT+GGG + chr7_2:86407409-86407428 None:intergenic 25.0%
! ATTTAGAGAATTCAACATTG+TGG + chr7_2:86407410-86407429 None:intergenic 25.0%
!!! AAAAGAACCATTGATTTGAA+AGG + chr7_2:86407518-86407537 None:intergenic 25.0%
!! ATCAATGGTTCTTTTATCAA+AGG - chr7_2:86407523-86407542 Msa1085610:intron 25.0%
!! TCTTCATGTTATTTGTACTT+AGG - chr7_2:86407788-86407807 Msa1085610:intron 25.0%
!! AGCAGGATAATATTTTACTA+TGG - chr7_2:86407818-86407837 Msa1085610:intron 25.0%
! AAACATAGATTGATGCTATT+CGG + chr7_2:86408139-86408158 None:intergenic 25.0%
!! CTATGTTTCTATATTGCTAA+AGG - chr7_2:86408151-86408170 Msa1085610:intron 25.0%
! GAGTAGAATAATTTAATCAG+TGG + chr7_2:86408222-86408241 None:intergenic 25.0%
! CTGATTAAATTATTCTACTC+AGG - chr7_2:86408222-86408241 Msa1085610:intron 25.0%
! GATTAAATTATTCTACTCAG+GGG - chr7_2:86408224-86408243 Msa1085610:intron 25.0%
! TCATTGGATTCTCTTTATAT+TGG - chr7_2:86408391-86408410 Msa1085610:intron 25.0%
!!! AGCTTGTTTCTATAACTTTT+AGG - chr7_2:86408417-86408436 Msa1085610:intron 25.0%
! ATTAAATCCACACTTTCAAA+TGG + chr7_2:86408487-86408506 None:intergenic 25.0%
!! CACAAACATACAAATTTTCA+TGG + chr7_2:86408529-86408548 None:intergenic 25.0%
! ATAAGCATCATGTGAAAAAT+TGG + chr7_2:86408776-86408795 None:intergenic 25.0%
!! ATGTGAGTGTATTTCTAAAA+TGG - chr7_2:86408930-86408949 Msa1085610:intron 25.0%
! TTGTGAAAATATACACATAC+TGG - chr7_2:86409001-86409020 Msa1085610:intron 25.0%
! ATGAAAATTTAACTGCTTAC+AGG - chr7_2:86409165-86409184 Msa1085610:intron 25.0%
! AAAAGAGCAATATAGAATGT+GGG + chr7_2:86409300-86409319 None:intergenic 25.0%
!! TTTTGGATCCATTAAAACTA+CGG - chr7_2:86409316-86409335 Msa1085610:intron 25.0%
!!! TTTTTTCTTCCACAAACAAA+AGG - chr7_2:86409343-86409362 Msa1085610:intron 25.0%
! ATTAAACCATTGAGGATATA+AGG + chr7_2:86409482-86409501 None:intergenic 25.0%
!! GTTTAATCTACAGTTTTCTT+AGG - chr7_2:86409495-86409514 Msa1085610:intron 25.0%
!!! TAAACTGTGTTGATTTTTGT+GGG - chr7_2:86409590-86409609 Msa1085610:intron 25.0%
! CATTAACACAATAAGAAGAT+AGG + chr7_2:86410151-86410170 None:intergenic 25.0%
! TGTTATATTGTTGGTATCAT+TGG + chr7_2:86410303-86410322 None:intergenic 25.0%
! TTTATAGATGAAATAGCCAT+TGG - chr7_2:86410443-86410462 Msa1085610:intron 25.0%
! TGAACCAAACATGATATAAA+AGG - chr7_2:86410654-86410673 Msa1085610:intron 25.0%
! GAACCAAACATGATATAAAA+GGG - chr7_2:86410655-86410674 Msa1085610:intron 25.0%
!! TTTCCCTTTTATATCATGTT+TGG + chr7_2:86410661-86410680 None:intergenic 25.0%
! TGAATGAAAATCCAAAGAAA+TGG - chr7_2:86410807-86410826 Msa1085610:intron 25.0%
! GAATGAAAATCCAAAGAAAT+GGG - chr7_2:86410808-86410827 Msa1085610:intron 25.0%
! GACATAAATGCAAACAATAA+GGG + chr7_2:86410998-86411017 None:intergenic 25.0%
! AGACATAAATGCAAACAATA+AGG + chr7_2:86410999-86411018 None:intergenic 25.0%
! AGTTTATCATGTAAAATCCT+AGG + chr7_2:86411236-86411255 None:intergenic 25.0%
!! TTTTACATGATAAACTTCCT+AGG - chr7_2:86411240-86411259 Msa1085610:CDS 25.0%
! ATACAATATGAGAAGGTATG+GGG + chr7_2:86403140-86403159 None:intergenic 30.0%
! GATACAATATGAGAAGGTAT+GGG + chr7_2:86403141-86403160 None:intergenic 30.0%
AGATACAATATGAGAAGGTA+TGG + chr7_2:86403142-86403161 None:intergenic 30.0%
! GCTGATTCTGTTATTACAAT+TGG - chr7_2:86403321-86403340 Msa1085610:three_prime_UTR 30.0%
GATTCTGTTATTACAATTGG+AGG - chr7_2:86403324-86403343 Msa1085610:three_prime_UTR 30.0%
ATTCAAATACTTAGCAGCAA+CGG + chr7_2:86403379-86403398 None:intergenic 30.0%
! CTTCTTTGGATATAAGTTGA+AGG + chr7_2:86403500-86403519 None:intergenic 30.0%
AGAAAGTAAGGAAAAGGAAA+AGG + chr7_2:86403566-86403585 None:intergenic 30.0%
AAATTGATGCAAAAGAATGG+AGG + chr7_2:86403875-86403894 None:intergenic 30.0%
TGTGGATCATATATAATGTG+TGG + chr7_2:86403975-86403994 None:intergenic 30.0%
!! AAAAAAAAAGTGCTCTTGCA+TGG + chr7_2:86404044-86404063 None:intergenic 30.0%
AGTTGAAAGAATTGGAGATT+GGG + chr7_2:86404293-86404312 None:intergenic 30.0%
ATGAAAGCAGTTGAAAGAAT+TGG + chr7_2:86404301-86404320 None:intergenic 30.0%
! AAAATTTAAGGCCCAAACTA+TGG + chr7_2:86404332-86404351 None:intergenic 30.0%
!!! TATTTTGGTAAAAACGAAGG+AGG - chr7_2:86404430-86404449 Msa1085610:intron 30.0%
TACTTGTTTGACAAACAAGA+TGG + chr7_2:86404569-86404588 None:intergenic 30.0%
!!! ATTTTTTAGGATCTTACCCA+GGG + chr7_2:86404631-86404650 None:intergenic 30.0%
!!! TATTTTTTAGGATCTTACCC+AGG + chr7_2:86404632-86404651 None:intergenic 30.0%
TCAAGAATCCAAACATTCTT+GGG - chr7_2:86404930-86404949 Msa1085610:intron 30.0%
CAAAAATCCAAATCTAGTCA+CGG + chr7_2:86405228-86405247 None:intergenic 30.0%
AAAATCTTCAACACTAAGCA+AGG + chr7_2:86405586-86405605 None:intergenic 30.0%
ACTGATGAAAGGAATAATAG+CGG - chr7_2:86405732-86405751 Msa1085610:CDS 30.0%
! AAACTTGGAAAATTTTGTGG+CGG - chr7_2:86405823-86405842 Msa1085610:intron 30.0%
CAAAACAGTAACACAATTGA+AGG + chr7_2:86406278-86406297 None:intergenic 30.0%
! TACAGCTATATTTTGTTGAC+AGG + chr7_2:86406725-86406744 None:intergenic 30.0%
GCTATTTAACCGGATTAAAT+CGG + chr7_2:86406805-86406824 None:intergenic 30.0%
!!! TTCCGCATAGTTTTAAAACT+CGG + chr7_2:86406968-86406987 None:intergenic 30.0%
TTTGACCAACAGGAAATAAA+TGG - chr7_2:86407161-86407180 Msa1085610:intron 30.0%
TTGACCAACAGGAAATAAAT+GGG - chr7_2:86407162-86407181 Msa1085610:intron 30.0%
ACCATATGATATTCTATCTG+TGG - chr7_2:86407380-86407399 Msa1085610:intron 30.0%
ACCACAGATAGAATATCATA+TGG + chr7_2:86407384-86407403 None:intergenic 30.0%
GACACTGAATTACAAAGAAT+TGG + chr7_2:86407614-86407633 None:intergenic 30.0%
ATTCTTTGTAATTCAGTGTC+AGG - chr7_2:86407614-86407633 Msa1085610:intron 30.0%
ACCAATTCTTCATATACTTG+TGG - chr7_2:86407663-86407682 Msa1085610:intron 30.0%
ACCACAAGTATATGAAGAAT+TGG + chr7_2:86407667-86407686 None:intergenic 30.0%
TTATACTCGAAAAATTGGTG+AGG - chr7_2:86407876-86407895 Msa1085610:intron 30.0%
! CAAGTTTGATGATATTGTTG+TGG - chr7_2:86408304-86408323 Msa1085610:intron 30.0%
ATAAAGAGAATCCAATGAAG+CGG + chr7_2:86408389-86408408 None:intergenic 30.0%
TTGGATTCTCTTTATATTGG+AGG - chr7_2:86408394-86408413 Msa1085610:intron 30.0%
GTAGATGAAAATGTACTTCA+TGG + chr7_2:86408635-86408654 None:intergenic 30.0%
ACTGGAAATTAACAAAACGT+AGG + chr7_2:86408665-86408684 None:intergenic 30.0%
!! TACGTTTTGTTAATTTCCAG+TGG - chr7_2:86408664-86408683 Msa1085610:intron 30.0%
!! ACGTTTTGTTAATTTCCAGT+GGG - chr7_2:86408665-86408684 Msa1085610:intron 30.0%
ACATGATGCTTATACCATTT+AGG - chr7_2:86408783-86408802 Msa1085610:intron 30.0%
! ATACACTCACATTTTGTATG+TGG + chr7_2:86408922-86408941 None:intergenic 30.0%
GGTTCTTATTGAGAAAATCA+AGG - chr7_2:86409022-86409041 Msa1085610:intron 30.0%
TCGAATAAATACCTGTATAC+CGG + chr7_2:86409277-86409296 None:intergenic 30.0%
CAAAAGAGCAATATAGAATG+TGG + chr7_2:86409301-86409320 None:intergenic 30.0%
! CACATTCTATATTGCTCTTT+TGG - chr7_2:86409299-86409318 Msa1085610:intron 30.0%
!!! AAAAGACACCGTAGTTTTAA+TGG + chr7_2:86409327-86409346 None:intergenic 30.0%
!! AATAAATGGCCTTTTGTTTG+TGG + chr7_2:86409355-86409374 None:intergenic 30.0%
! GAATATCTAGTTCACAAACT+TGG - chr7_2:86409386-86409405 Msa1085610:intron 30.0%
GAATATCTTTCCATTTCTTG+TGG - chr7_2:86409449-86409468 Msa1085610:intron 30.0%
TCTTTACCTTATATCCTCAA+TGG - chr7_2:86409473-86409492 Msa1085610:intron 30.0%
AACTGTAGATTAAACCATTG+AGG + chr7_2:86409490-86409509 None:intergenic 30.0%
! ATCTACAGTTTTCTTAGGTA+TGG - chr7_2:86409500-86409519 Msa1085610:intron 30.0%
! TCTACAGTTTTCTTAGGTAT+GGG - chr7_2:86409501-86409520 Msa1085610:intron 30.0%
!! GCTCTAAGGAAATAATATGA+AGG + chr7_2:86409543-86409562 None:intergenic 30.0%
! TTTCCTTAGAGCATCTTTAA+TGG - chr7_2:86409551-86409570 Msa1085610:intron 30.0%
! TTCCTTAGAGCATCTTTAAT+GGG - chr7_2:86409552-86409571 Msa1085610:intron 30.0%
!!! GTAAACTGTGTTGATTTTTG+TGG - chr7_2:86409589-86409608 Msa1085610:intron 30.0%
!!! AAACTGTGTTGATTTTTGTG+GGG - chr7_2:86409591-86409610 Msa1085610:intron 30.0%
! TTTAGGATTTAACCAATCCA+TGG - chr7_2:86409625-86409644 Msa1085610:intron 30.0%
AAAACTACTTAGATCAACCA+TGG + chr7_2:86409645-86409664 None:intergenic 30.0%
!! ATTTTTAACTAGCGTTTTGG+CGG - chr7_2:86410106-86410125 Msa1085610:intron 30.0%
TGCTTAAGTGTATAATTGGA+AGG - chr7_2:86410389-86410408 Msa1085610:intron 30.0%
GAGAAAAAGTTAACCCAAAA+CGG - chr7_2:86410411-86410430 Msa1085610:intron 30.0%
!! TAAAGAAAATAGGCCGTTTT+GGG + chr7_2:86410427-86410446 None:intergenic 30.0%
! ATAAAGAAAATAGGCCGTTT+TGG + chr7_2:86410428-86410447 None:intergenic 30.0%
TATTGTTTATTCCTTCTCAG+CGG - chr7_2:86410755-86410774 Msa1085610:CDS 30.0%
TAAATATATCTTGCTCCAAG+AGG - chr7_2:86411022-86411041 Msa1085610:CDS 30.0%
AGAATTGATGTAATAAGGTG+AGG + chr7_2:86411134-86411153 None:intergenic 30.0%
TGGGAAGAAAAAGATGAAAA+GGG + chr7_2:86411170-86411189 None:intergenic 30.0%
GCAAGAGATACAATATGAGA+AGG + chr7_2:86403147-86403166 None:intergenic 35.0%
AATTGAGTGGAAACAAAGTG+CGG - chr7_2:86403259-86403278 Msa1085610:three_prime_UTR 35.0%
TAAGGAAAAGGAAAAGGAGA+AGG + chr7_2:86403560-86403579 None:intergenic 35.0%
AGTGAGAGAAAGTAAGGAAA+AGG + chr7_2:86403572-86403591 None:intergenic 35.0%
GAAAACAGTGAGAGAAAGTA+AGG + chr7_2:86403578-86403597 None:intergenic 35.0%
AAGTGTCTAAAGGAAAGGAA+AGG + chr7_2:86403616-86403635 None:intergenic 35.0%
AAAGAAAAGCTCATCAACCA+AGG - chr7_2:86403648-86403667 Msa1085610:CDS 35.0%
AAGAAAAGCTCATCAACCAA+GGG - chr7_2:86403649-86403668 Msa1085610:intron 35.0%
!! TTTTGAATTTCACTCTAGGG+TGG - chr7_2:86403892-86403911 Msa1085610:intron 35.0%
!! TTTGAATTTCACTCTAGGGT+GGG - chr7_2:86403893-86403912 Msa1085610:intron 35.0%
TGGAAAAAATGTCTCGTCAT+AGG - chr7_2:86404139-86404158 Msa1085610:intron 35.0%
CAAAGAGGAAAGAAACTTGT+TGG + chr7_2:86404256-86404275 None:intergenic 35.0%
CAGTTGAAAGAATTGGAGAT+TGG + chr7_2:86404294-86404313 None:intergenic 35.0%
GAGCTGTTAAAGAAAAAGGA+GGG + chr7_2:86404598-86404617 None:intergenic 35.0%
AGAGCTGTTAAAGAAAAAGG+AGG + chr7_2:86404599-86404618 None:intergenic 35.0%
!!! TTTTTTAGGATCTTACCCAG+GGG + chr7_2:86404630-86404649 None:intergenic 35.0%
CATTATTATGGTATTGCTGG+TGG + chr7_2:86404853-86404872 None:intergenic 35.0%
ACTTGGAGTGAAATCATAAG+AGG - chr7_2:86404876-86404895 Msa1085610:intron 35.0%
GTCAAGAATCCAAACATTCT+TGG - chr7_2:86404929-86404948 Msa1085610:intron 35.0%
CAAGAATCCAAACATTCTTG+GGG - chr7_2:86404931-86404950 Msa1085610:intron 35.0%
GATAGAACCATAAACAGTCA+AGG - chr7_2:86404953-86404972 Msa1085610:intron 35.0%
AAAGGTTTACTAGAGTCGAA+TGG - chr7_2:86405030-86405049 Msa1085610:intron 35.0%
!! ATATTGGCTTATGACTCTGA+AGG + chr7_2:86405079-86405098 None:intergenic 35.0%
TTCAGAGTCATAAGCCAATA+TGG - chr7_2:86405078-86405097 Msa1085610:intron 35.0%
ATGCTCATTCCTATGTAGTT+TGG - chr7_2:86405156-86405175 Msa1085610:intron 35.0%
AAATTTGCCGTGACTAGATT+TGG - chr7_2:86405218-86405237 Msa1085610:CDS 35.0%
CAGGGAAAACAAGTATACAA+AGG + chr7_2:86405252-86405271 None:intergenic 35.0%
! TGCACTCCATCTTCAAATTT+TGG - chr7_2:86405498-86405517 Msa1085610:intron 35.0%
TCAGTGCCAAAATTTGAAGA+TGG + chr7_2:86405507-86405526 None:intergenic 35.0%
! CATTTTCAACGCATAACAAG+TGG - chr7_2:86405606-86405625 Msa1085610:intron 35.0%
! GTGTTTCTGTTCTTCTTCAA+TGG + chr7_2:86405705-86405724 None:intergenic 35.0%
ACACATTAGCTACTGATGAA+AGG - chr7_2:86405721-86405740 Msa1085610:CDS 35.0%
! AAGTCCATAGTTTTCAGACT+CGG - chr7_2:86405885-86405904 Msa1085610:intron 35.0%
AAACCGAACAATTATTGACC+CGG + chr7_2:86406067-86406086 None:intergenic 35.0%
! AGTTTAAAACTTGCCTTGAG+TGG - chr7_2:86406180-86406199 Msa1085610:intron 35.0%
! GTTTAAAACTTGCCTTGAGT+GGG - chr7_2:86406181-86406200 Msa1085610:intron 35.0%
GGCAACATCAAGTTTAAATG+TGG - chr7_2:86406213-86406232 Msa1085610:intron 35.0%
AATGTGGAATGTATTAACCG+TGG - chr7_2:86406229-86406248 Msa1085610:intron 35.0%
!!! CATAGTTTTAAAACTCGGCT+CGG + chr7_2:86406963-86406982 None:intergenic 35.0%
!!! AGCCGAGTTTTAAAACTATG+CGG - chr7_2:86406963-86406982 Msa1085610:intron 35.0%
GCAAAGAAAGACCATAATGT+AGG - chr7_2:86407218-86407237 Msa1085610:intron 35.0%
AAGAAAGACCATAATGTAGG+CGG - chr7_2:86407221-86407240 Msa1085610:intron 35.0%
!! CCATTGATTTGAAAGGAGTT+TGG + chr7_2:86407511-86407530 None:intergenic 35.0%
CCAAACTCCTTTCAAATCAA+TGG - chr7_2:86407508-86407527 Msa1085610:intron 35.0%
CATATACTTGTGGTGTACAA+AGG - chr7_2:86407673-86407692 Msa1085610:intron 35.0%
TACTCTTTATCTTCTGCTGT+TGG - chr7_2:86407721-86407740 Msa1085610:intron 35.0%
!!! TGTACTTAGGCTTTTTTAGC+AGG - chr7_2:86407801-86407820 Msa1085610:intron 35.0%
GAAAAATTGGTGAGGATCTT+GGG - chr7_2:86407884-86407903 Msa1085610:intron 35.0%
AAAAATTGGTGAGGATCTTG+GGG - chr7_2:86407885-86407904 Msa1085610:intron 35.0%
! CTATTGTTGGATCTGAAATC+AGG + chr7_2:86407943-86407962 None:intergenic 35.0%
AGAAGCTTGGTTTCTATTGT+TGG + chr7_2:86407956-86407975 None:intergenic 35.0%
CCACACTTTCAAATGGTATT+CGG + chr7_2:86408480-86408499 None:intergenic 35.0%
!! CGTTTTGTTAATTTCCAGTG+GGG - chr7_2:86408666-86408685 Msa1085610:intron 35.0%
!! GTTTTGTTAATTTCCAGTGG+GGG - chr7_2:86408667-86408686 Msa1085610:intron 35.0%
ATTGAGTAGCTTGAAAGCAA+GGG - chr7_2:86408720-86408739 Msa1085610:intron 35.0%
ACAAAGTTGTGGAAGTAATC+CGG + chr7_2:86408848-86408867 None:intergenic 35.0%
TACTTCCACAACTTTGTTCA+AGG - chr7_2:86408851-86408870 Msa1085610:intron 35.0%
! CTAAAATGGTAATGAGCAGA+AGG - chr7_2:86408944-86408963 Msa1085610:intron 35.0%
AAGAACCATAGACATCTTAG+CGG + chr7_2:86408980-86408999 None:intergenic 35.0%
CGAATAAATACCTGTATACC+GGG + chr7_2:86409276-86409295 None:intergenic 35.0%
TTCGTGTGATGCACAATAAA+TGG + chr7_2:86409369-86409388 None:intergenic 35.0%
AATAAATGGCCTTTCGTTTG+TGG + chr7_2:86409418-86409437 None:intergenic 35.0%
TTCGTGTGATGCACAATAAA+TGG + chr7_2:86409369-86409388 None:intergenic 35.0%
AGGTAAAGATCCACAAGAAA+TGG + chr7_2:86409462-86409481 None:intergenic 35.0%
! TCCTTAGAGCATCTTTAATG+GGG - chr7_2:86409553-86409572 Msa1085610:intron 35.0%
TTTAATGGGGTGAACTAAAG+TGG - chr7_2:86409566-86409585 Msa1085610:intron 35.0%
TTAATGGGGTGAACTAAAGT+GGG - chr7_2:86409567-86409586 Msa1085610:intron 35.0%
!! GTGGGGTCAAATTGTTATTT+AGG - chr7_2:86409608-86409627 Msa1085610:intron 35.0%
TACTTAGATCAACCATGGAT+TGG + chr7_2:86409640-86409659 None:intergenic 35.0%
!! TTTTTAACTAGCGTTTTGGC+GGG - chr7_2:86410107-86410126 Msa1085610:intron 35.0%
AATAAGAAGATAGGAGAGAC+GGG + chr7_2:86410142-86410161 None:intergenic 35.0%
CAATAAGAAGATAGGAGAGA+CGG + chr7_2:86410143-86410162 None:intergenic 35.0%
GGGAAAAGAAAAGTTTGATC+AGG - chr7_2:86410675-86410694 Msa1085610:intron 35.0%
GAAAATCCAAAGAAATGGGA+AGG - chr7_2:86410812-86410831 Msa1085610:intron 35.0%
ATGTTAATGAATCTGTTCCC+AGG - chr7_2:86410930-86410949 Msa1085610:CDS 35.0%
TCTCATACTATACATCCTCT+TGG + chr7_2:86411040-86411059 None:intergenic 35.0%
GTGGGAAGAAAAAGATGAAA+AGG + chr7_2:86411171-86411190 None:intergenic 35.0%
TTTATGGGAGTGATGATTGT+GGG + chr7_2:86411189-86411208 None:intergenic 35.0%
ATTTATGGGAGTGATGATTG+TGG + chr7_2:86411190-86411209 None:intergenic 35.0%
AGATTGAGACTTAAACCTTC+AGG + chr7_2:86411280-86411299 None:intergenic 35.0%
!! CTTTCTGGAATGCAATTGAG+TGG - chr7_2:86403246-86403265 Msa1085610:three_prime_UTR 40.0%
TGGAAACAAAGTGCGGAAAT+TGG - chr7_2:86403266-86403285 Msa1085610:three_prime_UTR 40.0%
AACAAGAAGATTGCCAGTGA+GGG + chr7_2:86403457-86403476 None:intergenic 40.0%
CTTCTTGTTGAGCGTTTGAT+TGG - chr7_2:86403468-86403487 Msa1085610:CDS 40.0%
TTGGCAAGTGTCTAAAGGAA+AGG + chr7_2:86403621-86403640 None:intergenic 40.0%
!! TGATGAGCTTTTCTTTGAGG+AGG + chr7_2:86403644-86403663 None:intergenic 40.0%
!!! GGTTGATGAGCTTTTCTTTG+AGG + chr7_2:86403647-86403666 None:intergenic 40.0%
AGGCCATATGTTATTCCTGT+TGG - chr7_2:86403675-86403694 Msa1085610:intron 40.0%
CCATATGTTATTCCTGTTGG+CGG - chr7_2:86403678-86403697 Msa1085610:intron 40.0%
!! TTGAATTTCACTCTAGGGTG+GGG - chr7_2:86403894-86403913 Msa1085610:intron 40.0%
! AGAAGGTATACATAGACCCA+AGG + chr7_2:86404010-86404029 None:intergenic 40.0%
TCGATACAAGACTAGACTAG+TGG + chr7_2:86404189-86404208 None:intergenic 40.0%
GAGATTGTTGAGAGACAAAG+AGG + chr7_2:86404271-86404290 None:intergenic 40.0%
TCATCTCCTCATCCATAGTT+TGG - chr7_2:86404317-86404336 Msa1085610:intron 40.0%
CATCTCCTCATCCATAGTTT+GGG - chr7_2:86404318-86404337 Msa1085610:intron 40.0%
GTTCTATCCCCAAGAATGTT+TGG + chr7_2:86404941-86404960 None:intergenic 40.0%
TGTCGATCCTTGACTGTTTA+TGG + chr7_2:86404963-86404982 None:intergenic 40.0%
! CTGAGCACATTTTGCCATAT+TGG + chr7_2:86405095-86405114 None:intergenic 40.0%
TATCCTTGAAGCCTCAAACT+CGG - chr7_2:86405125-86405144 Msa1085610:intron 40.0%
CATATTCTTAGCCGAGTTTG+AGG + chr7_2:86405139-86405158 None:intergenic 40.0%
TTTCTTGTGAGCACAGCAAA+AGG + chr7_2:86405200-86405219 None:intergenic 40.0%
!! AGCATTCAGGTTGACTCATA+CGG + chr7_2:86405398-86405417 None:intergenic 40.0%
! CTTTGAGTTCTTGTCAGTCA+GGG + chr7_2:86405432-86405451 None:intergenic 40.0%
! TCTTTGAGTTCTTGTCAGTC+AGG + chr7_2:86405433-86405452 None:intergenic 40.0%
CACCTTCATTGAGTGAGATA+GGG + chr7_2:86405456-86405475 None:intergenic 40.0%
ACACCTTCATTGAGTGAGAT+AGG + chr7_2:86405457-86405476 None:intergenic 40.0%
!! CTCAATGAAGGTGTTTAGAG+TGG - chr7_2:86405463-86405482 Msa1085610:intron 40.0%
ACACTAAGCAAGGAAGTCTT+TGG + chr7_2:86405576-86405595 None:intergenic 40.0%
AACGCATAACAAGTGGAAAG+AGG - chr7_2:86405613-86405632 Msa1085610:intron 40.0%
AGTTGTCATTCACCCACAAT+AGG - chr7_2:86405674-86405693 Msa1085610:intron 40.0%
TCAATGGCAGAACCTATTGT+GGG + chr7_2:86405689-86405708 None:intergenic 40.0%
TTCAATGGCAGAACCTATTG+TGG + chr7_2:86405690-86405709 None:intergenic 40.0%
!! TTGGAAAATTTTGTGGCGGA+CGG - chr7_2:86405827-86405846 Msa1085610:intron 40.0%
! TTTTGACCGAGTTAACTGCA+TGG + chr7_2:86405984-86406003 None:intergenic 40.0%
AAATTCCAACTTGCCTTGAG+TGG - chr7_2:86406137-86406156 Msa1085610:CDS 40.0%
AATTCCAACTTGCCTTGAGT+GGG - chr7_2:86406138-86406157 Msa1085610:CDS 40.0%
GTGGTGGTTAATACATTCCA+CGG + chr7_2:86406249-86406268 None:intergenic 40.0%
CAGTAACACAATTGAAGGCA+TGG + chr7_2:86406273-86406292 None:intergenic 40.0%
!! AACGAGTCACCGATTTAATC+CGG - chr7_2:86406793-86406812 Msa1085610:intron 40.0%
!! GATGACTCGGTTAGATAACT+CGG + chr7_2:86406849-86406868 None:intergenic 40.0%
AACTATGCGGAAGTCTATTG+TGG - chr7_2:86406976-86406995 Msa1085610:intron 40.0%
GATGTTTGTCATCCTTGGAT+CGG + chr7_2:86407057-86407076 None:intergenic 40.0%
ATCCAAGGATGACAAACATC+TGG - chr7_2:86407057-86407076 Msa1085610:intron 40.0%
ATCCAGATGTTTGTCATCCT+TGG + chr7_2:86407062-86407081 None:intergenic 40.0%
CTGTGTGCAACAAACAACAA+CGG - chr7_2:86407127-86407146 Msa1085610:intron 40.0%
! CAAGAACTTGTTTGACCAAC+AGG - chr7_2:86407151-86407170 Msa1085610:intron 40.0%
GGTACCCATTTATTTCCTGT+TGG + chr7_2:86407169-86407188 None:intergenic 40.0%
! AGGATTTTTATGCAGGAGCA+AGG - chr7_2:86407246-86407265 Msa1085610:intron 40.0%
TGCTCCAAATGTGCTATGTT+CGG - chr7_2:86407434-86407453 Msa1085610:intron 40.0%
TATGTCAGAAGGGGGATATT+TGG - chr7_2:86407461-86407480 Msa1085610:intron 40.0%
ATTTGGACCAGACATAAGCT+AGG - chr7_2:86407478-86407497 Msa1085610:intron 40.0%
CCATATACCTAGCTTATGTC+TGG + chr7_2:86407488-86407507 None:intergenic 40.0%
CCAGACATAAGCTAGGTATA+TGG - chr7_2:86407485-86407504 Msa1085610:intron 40.0%
CGAAAAATTGGTGAGGATCT+TGG - chr7_2:86407883-86407902 Msa1085610:intron 40.0%
! TGGATCTGAAATCAGGACTT+GGG + chr7_2:86407936-86407955 None:intergenic 40.0%
! TTGGATCTGAAATCAGGACT+TGG + chr7_2:86407937-86407956 None:intergenic 40.0%
ATTGAGCTGCAGATTCAAAG+TGG - chr7_2:86408269-86408288 Msa1085610:intron 40.0%
GATGATATTGTTGTGGCTTG+TGG - chr7_2:86408311-86408330 Msa1085610:intron 40.0%
AGAATCCAATGAAGCGGAAA+CGG + chr7_2:86408383-86408402 None:intergenic 40.0%
CCGAATACCATTTGAAAGTG+TGG - chr7_2:86408477-86408496 Msa1085610:intron 40.0%
AGCTTAAGCTCACATTCACT+GGG + chr7_2:86408581-86408600 None:intergenic 40.0%
CATTGAGTAGCTTGAAAGCA+AGG - chr7_2:86408719-86408738 Msa1085610:intron 40.0%
ATGTGAGTCATCTAAGCAGA+AGG + chr7_2:86408750-86408769 None:intergenic 40.0%
CAAAGTTGTGGAAGTAATCC+GGG + chr7_2:86408847-86408866 None:intergenic 40.0%
! TTTGTTCAAGGCTTGCTTGA+CGG - chr7_2:86408863-86408882 Msa1085610:intron 40.0%
TGTGCCAAGTCATAACATGA+AGG - chr7_2:86409074-86409093 Msa1085610:intron 40.0%
GGAACCTTCATGTTATGACT+TGG + chr7_2:86409081-86409100 None:intergenic 40.0%
GTTCCTAAAACACATGTCTG+TGG - chr7_2:86409096-86409115 Msa1085610:intron 40.0%
! AGACCACAGACATGTGTTTT+AGG + chr7_2:86409102-86409121 None:intergenic 40.0%
GTCTGTGAAACTTCATCATC+TGG - chr7_2:86409118-86409137 Msa1085610:intron 40.0%
ATTTAACTGCTTACAGGCCA+AGG - chr7_2:86409171-86409190 Msa1085610:intron 40.0%
TTTAACTGCTTACAGGCCAA+GGG - chr7_2:86409172-86409191 Msa1085610:intron 40.0%
CTATGCAATGAACACTTCTG+AGG - chr7_2:86409201-86409220 Msa1085610:intron 40.0%
AAAGAAGTTGCTGAAGCTAC+AGG - chr7_2:86409238-86409257 Msa1085610:intron 40.0%
! TGGTTGTTTCCACAAACGAA+AGG - chr7_2:86409406-86409425 Msa1085610:intron 40.0%
ACCCCATTAAAGATGCTCTA+AGG + chr7_2:86409557-86409576 None:intergenic 40.0%
TTTATTCCTTCTCAGCGGTA+AGG - chr7_2:86410760-86410779 Msa1085610:CDS 40.0%
ATCCAAAGAAATGGGAAGGA+AGG - chr7_2:86410816-86410835 Msa1085610:intron 40.0%
TTCCTTCCTTCCCATTTCTT+TGG + chr7_2:86410821-86410840 None:intergenic 40.0%
AAGATCCTCTTCGTACATAC+AGG - chr7_2:86410839-86410858 Msa1085610:intron 40.0%
CCTTGTCATACAATCCTAAG+AGG + chr7_2:86410868-86410887 None:intergenic 40.0%
CCTCTTAGGATTGTATGACA+AGG - chr7_2:86410865-86410884 Msa1085610:intron 40.0%
TTTCCAATTCCATCTTGCCT+GGG + chr7_2:86410950-86410969 None:intergenic 40.0%
AGGTGAAAGAGAAAGAACCT+AGG + chr7_2:86411260-86411279 None:intergenic 40.0%
GTTCTTTCTCTTTCACCTGA+AGG - chr7_2:86411262-86411281 Msa1085610:CDS 40.0%
GAAGCAAGTCTCAACAGTGA+TGG - chr7_2:86403053-86403072 Msa1085610:three_prime_UTR 45.0%
! TATGAGAAGGTATGGGGTCT+AGG + chr7_2:86403134-86403153 None:intergenic 45.0%
TTCCATCTGTGAATCGGAGT+CGG + chr7_2:86403177-86403196 None:intergenic 45.0%
GGAAGCTTCCATCTGTGAAT+CGG + chr7_2:86403183-86403202 None:intergenic 45.0%
! TCTGTATTTGCTGGCAGGTT+CGG + chr7_2:86403204-86403223 None:intergenic 45.0%
! ACACTTCTGTATTTGCTGGC+AGG + chr7_2:86403209-86403228 None:intergenic 45.0%
TGCCAGCAAATACAGAAGTG+TGG - chr7_2:86403208-86403227 Msa1085610:three_prime_UTR 45.0%
AGCCACACTTCTGTATTTGC+TGG + chr7_2:86403213-86403232 None:intergenic 45.0%
GCGGAAATTGGAGTTCTTGA+TGG - chr7_2:86403278-86403297 Msa1085610:three_prime_UTR 45.0%
! AGCGGATTCAGCAATTGCAT+CGG + chr7_2:86403304-86403323 None:intergenic 45.0%
TGGCACGACAGTGATTACTT+TGG + chr7_2:86403353-86403372 None:intergenic 45.0%
GAAGTGCGGAGTATAAGGAA+AGG + chr7_2:86403408-86403427 None:intergenic 45.0%
! GCTTAGAAGTGCGGAGTATA+AGG + chr7_2:86403413-86403432 None:intergenic 45.0%
CAACGAGATGCTTAGAAGTG+CGG + chr7_2:86403422-86403441 None:intergenic 45.0%
CAACAAGAAGATTGCCAGTG+AGG + chr7_2:86403458-86403477 None:intergenic 45.0%
AAAGGAAAAGGAGAAGGAGG+AGG + chr7_2:86403554-86403573 None:intergenic 45.0%
GGAAAAGGAAAAGGAGAAGG+AGG + chr7_2:86403557-86403576 None:intergenic 45.0%
!! GAGCTTTTCTTTGAGGAGGT+TGG + chr7_2:86403640-86403659 None:intergenic 45.0%
AAAAGCTCATCAACCAAGGG+AGG - chr7_2:86403652-86403671 Msa1085610:intron 45.0%
CCGCCAACAGGAATAACATA+TGG + chr7_2:86403681-86403700 None:intergenic 45.0%
GATCAAACTCTCTCGGAACA+TGG - chr7_2:86403700-86403719 Msa1085610:intron 45.0%
! CACATCTGAGACTGAACCTT+GGG - chr7_2:86403991-86404010 Msa1085610:intron 45.0%
AAGACTAGACTAGTGGCAAC+AGG + chr7_2:86404182-86404201 None:intergenic 45.0%
TAAGGCCCAAACTATGGATG+AGG + chr7_2:86404326-86404345 None:intergenic 45.0%
GTGTTGAAGCCAAATTCGTG+AGG - chr7_2:86404499-86404518 Msa1085610:intron 45.0%
AGGAAGACTATACTGGAAGC+AGG - chr7_2:86404528-86404547 Msa1085610:intron 45.0%
!! TGACAAACAAGATGGACTGC+AGG + chr7_2:86404561-86404580 None:intergenic 45.0%
!! GGTTTTCGTGCTCTTGTTGT+TGG + chr7_2:86404832-86404851 None:intergenic 45.0%
! TATGACTCTGAAGGAGGAGT+TGG + chr7_2:86405070-86405089 None:intergenic 45.0%
! TTGGCTTATGACTCTGAAGG+AGG + chr7_2:86405076-86405095 None:intergenic 45.0%
TTGTGAGCACAGCAAAAGGA+CGG + chr7_2:86405196-86405215 None:intergenic 45.0%
ATCGGTCAACATTAGCAGCA+GGG + chr7_2:86405270-86405289 None:intergenic 45.0%
!! TTGGTGAGAAGCACTCTGAT+CGG + chr7_2:86405288-86405307 None:intergenic 45.0%
TCTCACCAAGCATGACATGT+TGG - chr7_2:86405299-86405318 Msa1085610:intron 45.0%
TTACGCCAACATGTCATGCT+TGG + chr7_2:86405307-86405326 None:intergenic 45.0%
!! GCATTCAGGTTGACTCATAC+GGG + chr7_2:86405397-86405416 None:intergenic 45.0%
! GGTTGATTGGTTGAGCATTC+AGG + chr7_2:86405411-86405430 None:intergenic 45.0%
! TCTTGTCAGTCAGGGTTGAT+TGG + chr7_2:86405424-86405443 None:intergenic 45.0%
GACCCTATCTCACTCAATGA+AGG - chr7_2:86405451-86405470 Msa1085610:intron 45.0%
TTTGAAGATGGAGTGCAGCA+AGG + chr7_2:86405495-86405514 None:intergenic 45.0%
! CAATGGACTTCAGCTTGAGT+TGG + chr7_2:86405531-86405550 None:intergenic 45.0%
GCATAACAAGTGGAAAGAGG+AGG - chr7_2:86405616-86405635 Msa1085610:intron 45.0%
TGGAAAGAGGAGGTAGATTG+TGG - chr7_2:86405626-86405645 Msa1085610:intron 45.0%
GAGGCGGTAACAAGAAAACT+TGG - chr7_2:86405808-86405827 Msa1085610:intron 45.0%
! CATAGTTTTCAGACTCGGCT+CGG - chr7_2:86405890-86405909 Msa1085610:intron 45.0%
!! ATCCAAAAGTTGGCTCGAAC+CGG + chr7_2:86405958-86405977 None:intergenic 45.0%
TGCATGGCAGATCCAAAAGT+TGG + chr7_2:86405968-86405987 None:intergenic 45.0%
GATCTGCCATGCAGTTAACT+CGG - chr7_2:86405975-86405994 Msa1085610:intron 45.0%
GCAGTTAACTCGGTCAAAAC+CGG - chr7_2:86405985-86406004 Msa1085610:intron 45.0%
CTCGGAGGATTGAAGAAAAC+CGG - chr7_2:86406041-86406060 Msa1085610:intron 45.0%
! ACACAATTGAAGGCATGGTG+TGG + chr7_2:86406268-86406287 None:intergenic 45.0%
ATGACTGAACCGGATCAACT+CGG + chr7_2:86406871-86406890 None:intergenic 45.0%
TATGCGGAAGTCTATTGTGG+CGG - chr7_2:86406979-86406998 Msa1085610:intron 45.0%
GGCTAGATCTCATAAGTGAG+TGG + chr7_2:86407036-86407055 None:intergenic 45.0%
TATGAGATCTAGCCGATCCA+AGG - chr7_2:86407042-86407061 Msa1085610:intron 45.0%
GGATGACAAACATCTGGATG+TGG - chr7_2:86407063-86407082 Msa1085610:intron 45.0%
AAACATCTGGATGTGGTTGC+TGG - chr7_2:86407070-86407089 Msa1085610:intron 45.0%
ATGGGTACCAAATGTCCCAA+AGG - chr7_2:86407180-86407199 Msa1085610:intron 45.0%
TGGGTACCAAATGTCCCAAA+GGG - chr7_2:86407181-86407200 Msa1085610:intron 45.0%
GTCTTTCTTTGCTGCCTTCT+TGG + chr7_2:86407210-86407229 None:intergenic 45.0%
AATCCTAGCCGCCTACATTA+TGG + chr7_2:86407232-86407251 None:intergenic 45.0%
TCAGGAGCTCCTGATTTAGA+GGG + chr7_2:86407272-86407291 None:intergenic 45.0%
ATCAGGAGCTCCTGATTTAG+AGG + chr7_2:86407273-86407292 None:intergenic 45.0%
CACACCGAACATAGCACATT+TGG + chr7_2:86407441-86407460 None:intergenic 45.0%
!! TGTTCGGTGTGTATGTCAGA+AGG - chr7_2:86407450-86407469 Msa1085610:intron 45.0%
!! GTTCGGTGTGTATGTCAGAA+GGG - chr7_2:86407451-86407470 Msa1085610:intron 45.0%
! TTCGGTGTGTATGTCAGAAG+GGG - chr7_2:86407452-86407471 Msa1085610:intron 45.0%
AGGAATGTATACTCTGCGAC+TGG - chr7_2:86407543-86407562 Msa1085610:intron 45.0%
! ATATTGTTGTGGCTTGTGGC+AGG - chr7_2:86408315-86408334 Msa1085610:intron 45.0%
GCTTAAGCTCACATTCACTG+GGG + chr7_2:86408580-86408599 None:intergenic 45.0%
CAGCTTAAGCTCACATTCAC+TGG + chr7_2:86408582-86408601 None:intergenic 45.0%
!! ACAATTGCCGGTTTAGCACT+GGG - chr7_2:86408691-86408710 Msa1085610:intron 45.0%
TGATGAACCCAGTGCTAAAC+CGG + chr7_2:86408701-86408720 None:intergenic 45.0%
ATTCTCCGTTTGTGATGACC+CGG - chr7_2:86408826-86408845 Msa1085610:intron 45.0%
GTAATCCGGGTCATCACAAA+CGG + chr7_2:86408834-86408853 None:intergenic 45.0%
GCAAGCCTTGAACAAAGTTG+TGG + chr7_2:86408859-86408878 None:intergenic 45.0%
TCTGACCGCTAAGATGTCTA+TGG - chr7_2:86408972-86408991 Msa1085610:intron 45.0%
CACAAGCACATTATGTCTGC+TGG + chr7_2:86409056-86409075 None:intergenic 45.0%
!! TACAGGTGTTGTTCTTGACC+CGG - chr7_2:86409255-86409274 Msa1085610:intron 45.0%
TTGTTCTTGACCCGGTATAC+AGG - chr7_2:86409263-86409282 Msa1085610:intron 45.0%
ATCCTCTTCGTACATACAGG+TGG - chr7_2:86410842-86410861 Msa1085610:intron 45.0%
TATGACAAGGTCGATCAGCT+GGG - chr7_2:86410878-86410897 Msa1085610:intron 45.0%
CTTTCCAATTCCATCTTGCC+TGG + chr7_2:86410951-86410970 None:intergenic 45.0%
!!! TTGATTTTAATTAAAATTAT+AGG - chr7_2:86410220-86410239 Msa1085610:intron 5.0%
!! ACTATAATTTATATTAAAAA+AGG + chr7_2:86411394-86411413 None:intergenic 5.0%
GCAAGTCTCAACAGTGATGG+CGG - chr7_2:86403056-86403075 Msa1085610:three_prime_UTR 50.0%
CAAGTCTCAACAGTGATGGC+GGG - chr7_2:86403057-86403076 Msa1085610:three_prime_UTR 50.0%
! AAGTCTCAACAGTGATGGCG+GGG - chr7_2:86403058-86403077 Msa1085610:three_prime_UTR 50.0%
AGCCATACACAGCTCCTTCA+TGG - chr7_2:86403100-86403119 Msa1085610:three_prime_UTR 50.0%
GCCATACACAGCTCCTTCAT+GGG - chr7_2:86403101-86403120 Msa1085610:three_prime_UTR 50.0%
TCTAGGTAGGATGCCCATGA+AGG + chr7_2:86403117-86403136 None:intergenic 50.0%
! AGAAGGTATGGGGTCTAGGT+AGG + chr7_2:86403130-86403149 None:intergenic 50.0%
GTGAATCGGAGTCGGAAGAT+GGG + chr7_2:86403169-86403188 None:intergenic 50.0%
TGTGAATCGGAGTCGGAAGA+TGG + chr7_2:86403170-86403189 None:intergenic 50.0%
TTCCGACTCCGATTCACAGA+TGG - chr7_2:86403172-86403191 Msa1085610:three_prime_UTR 50.0%
ATACTTAGCAGCAACGGCAG+TGG + chr7_2:86403373-86403392 None:intergenic 50.0%
AGAAGATTGCCAGTGAGGGT+GGG + chr7_2:86403453-86403472 None:intergenic 50.0%
AAGAAGATTGCCAGTGAGGG+TGG + chr7_2:86403454-86403473 None:intergenic 50.0%
GGAGGTTGGCAAGTGTCTAA+AGG + chr7_2:86403626-86403645 None:intergenic 50.0%
TAACATATGGCCTCCTCCCT+TGG + chr7_2:86403668-86403687 None:intergenic 50.0%
AGAGAGTTTGATCCGCCAAC+AGG + chr7_2:86403693-86403712 None:intergenic 50.0%
! GTTGGCGGATCAAACTCTCT+CGG - chr7_2:86403693-86403712 Msa1085610:intron 50.0%
!! ATTTCACTCTAGGGTGGGGT+AGG - chr7_2:86403898-86403917 Msa1085610:intron 50.0%
CCAAGGTTCAGTCTCAGATG+TGG + chr7_2:86403993-86404012 None:intergenic 50.0%
! CCACATCTGAGACTGAACCT+TGG - chr7_2:86403990-86404009 Msa1085610:intron 50.0%
GCATGGAGACTTAGAGGAGA+AGG + chr7_2:86404027-86404046 None:intergenic 50.0%
GCTCTTGCATGGAGACTTAG+AGG + chr7_2:86404033-86404052 None:intergenic 50.0%
TGAAGCCAAATTCGTGAGGC+AGG - chr7_2:86404503-86404522 Msa1085610:intron 50.0%
GCAGGAGAGGAAGACTATAC+TGG - chr7_2:86404521-86404540 Msa1085610:intron 50.0%
! TTTAGGATCTTACCCAGGGG+AGG + chr7_2:86404627-86404646 None:intergenic 50.0%
!! TCGTGCTCTTGTTGTTGGCT+CGG + chr7_2:86404827-86404846 None:intergenic 50.0%
! TAGCCGAGTTTGAGGCTTCA+AGG + chr7_2:86405131-86405150 None:intergenic 50.0%
TGTGAGCACAGCAAAAGGAC+GGG + chr7_2:86405195-86405214 None:intergenic 50.0%
GATCGGTCAACATTAGCAGC+AGG + chr7_2:86405271-86405290 None:intergenic 50.0%
AGGTAGATTGTGGACCCTGT+TGG - chr7_2:86405636-86405655 Msa1085610:intron 50.0%
!!! TGTTTTGACCTCCGAAGACG+AGG - chr7_2:86405789-86405808 Msa1085610:intron 50.0%
TCTTGTTACCGCCTCGTCTT+CGG + chr7_2:86405803-86405822 None:intergenic 50.0%
!!! AAAATTTTGTGGCGGACGGC+AGG - chr7_2:86405831-86405850 Msa1085610:intron 50.0%
!!! AAATTTTGTGGCGGACGGCA+GGG - chr7_2:86405832-86405851 Msa1085610:intron 50.0%
CGAGCCGAGTCTGAAAACTA+TGG + chr7_2:86405892-86405911 None:intergenic 50.0%
CGGTCAAAACCGGTCAAACT+CGG - chr7_2:86405995-86406014 Msa1085610:intron 50.0%
GAGGATTGAAGAAAACCGGC+CGG - chr7_2:86406045-86406064 Msa1085610:intron 50.0%
AGGATTGAAGAAAACCGGCC+GGG - chr7_2:86406046-86406065 Msa1085610:intron 50.0%
CGAACAATTATTGACCCGGC+CGG + chr7_2:86406063-86406082 None:intergenic 50.0%
CGGCCGGGTCAATAATTGTT+CGG - chr7_2:86406061-86406080 Msa1085610:intron 50.0%
GATTCCCACTCAAGGCAAGT+TGG + chr7_2:86406145-86406164 None:intergenic 50.0%
! CAATTGAAGGCATGGTGTGG+TGG + chr7_2:86406265-86406284 None:intergenic 50.0%
GTTGATCCGGTTCAGTCATG+CGG - chr7_2:86406872-86406891 Msa1085610:intron 50.0%
TGGTCGAACCACTGAGTCAT+TGG + chr7_2:86406903-86406922 None:intergenic 50.0%
GTACTGGGTTACTGGGTCAA+TGG + chr7_2:86406923-86406942 None:intergenic 50.0%
CAATGGCTGACAGCGGTAAA+CGG - chr7_2:86407101-86407120 Msa1085610:intron 50.0%
!! TGGTAGCCCTTTGGGACATT+TGG + chr7_2:86407190-86407209 None:intergenic 50.0%
! TGCCTTCTTGGTAGCCCTTT+GGG + chr7_2:86407198-86407217 None:intergenic 50.0%
AGACCATAATGTAGGCGGCT+AGG - chr7_2:86407226-86407245 Msa1085610:intron 50.0%
! GGCGGCTAGGATTTTTATGC+AGG - chr7_2:86407239-86407258 Msa1085610:intron 50.0%
TCGGTGTGTATGTCAGAAGG+GGG - chr7_2:86407453-86407472 Msa1085610:intron 50.0%
TCTACTCAGGGGCTACATAG+AGG - chr7_2:86408235-86408254 Msa1085610:intron 50.0%
GGGCTACATAGAGGCAGTTA+GGG - chr7_2:86408244-86408263 Msa1085610:intron 50.0%
ACCATCCGTTTCCGCTTCAT+TGG - chr7_2:86408375-86408394 Msa1085610:intron 50.0%
TCCAATGAAGCGGAAACGGA+TGG + chr7_2:86408379-86408398 None:intergenic 50.0%
CTCACATTCACTGGGGAGTT+TGG + chr7_2:86408573-86408592 None:intergenic 50.0%
!! CACAATTGCCGGTTTAGCAC+TGG - chr7_2:86408690-86408709 Msa1085610:intron 50.0%
! ACCATTTAGGTGCTACCTGC+AGG - chr7_2:86408796-86408815 Msa1085610:intron 50.0%
ACCTGCAGGTAGCACCTAAA+TGG + chr7_2:86408800-86408819 None:intergenic 50.0%
!! TTGCTTGACGGACTCAAAGC+TGG - chr7_2:86408875-86408894 Msa1085610:intron 50.0%
CATTGCATAGCCAAGACCCT+TGG + chr7_2:86409191-86409210 None:intergenic 50.0%
GTACATACAGGTGGCCTCTT+AGG - chr7_2:86410851-86410870 Msa1085610:intron 50.0%
GTATGACAAGGTCGATCAGC+TGG - chr7_2:86410877-86410896 Msa1085610:intron 50.0%
GATCAGCTGGGTTCCTTTGT+GGG - chr7_2:86410890-86410909 Msa1085610:intron 50.0%
ATCAGCTGGGTTCCTTTGTG+GGG - chr7_2:86410891-86410910 Msa1085610:intron 50.0%
TGGGTTCCTTTGTGGGGAAT+TGG - chr7_2:86410897-86410916 Msa1085610:intron 50.0%
TCGTTGCCAATTCCCCACAA+AGG + chr7_2:86410906-86410925 None:intergenic 50.0%
TGTGGGGAATTGGCAACGAA+TGG - chr7_2:86410907-86410926 Msa1085610:CDS 50.0%
GAATCTGTTCCCAGGCAAGA+TGG - chr7_2:86410938-86410957 Msa1085610:CDS 50.0%
GTTCCCAGGCAAGATGGAAT+TGG - chr7_2:86410944-86410963 Msa1085610:CDS 50.0%
GCCCATGAAGGAGCTGTGTA+TGG + chr7_2:86403105-86403124 None:intergenic 55.0%
CTGAAGCGCGACGATCTTTC+TGG - chr7_2:86403231-86403250 Msa1085610:three_prime_UTR 55.0%
AGCTCATCAACCAAGGGAGG+AGG - chr7_2:86403655-86403674 Msa1085610:intron 55.0%
CCTCTCCTGCCTCACGAATT+TGG + chr7_2:86404511-86404530 None:intergenic 55.0%
CCAAATTCGTGAGGCAGGAG+AGG - chr7_2:86404508-86404527 Msa1085610:intron 55.0%
ACAGCTCTATTGTCCTCCCC+TGG - chr7_2:86404611-86404630 Msa1085610:intron 55.0%
CAGCTCTATTGTCCTCCCCT+GGG - chr7_2:86404612-86404631 Msa1085610:intron 55.0%
GTGAGCACAGCAAAAGGACG+GGG + chr7_2:86405194-86405213 None:intergenic 55.0%
TTCCTCTGTGCGCACCAACA+GGG + chr7_2:86405653-86405672 None:intergenic 55.0%
TTTGACCTCCGAAGACGAGG+CGG - chr7_2:86405792-86405811 Msa1085610:intron 55.0%
ATCACATGGATGCCACGCGT+CGG - chr7_2:86405856-86405875 Msa1085610:intron 55.0%
!!! TTTTCAGACTCGGCTCGGAC+CGG - chr7_2:86405895-86405914 Msa1085610:intron 55.0%
!!! AGCCGGTTCGAGCCAACTTT+TGG - chr7_2:86405953-86405972 Msa1085610:intron 55.0%
CGGCCAGAACCGGATTAAAC+CGG - chr7_2:86406015-86406034 Msa1085610:intron 55.0%
!! TCGCCGGTTTAATCCGGTTC+TGG + chr7_2:86406021-86406040 None:intergenic 55.0%
ACCGGATTAAACCGGCGACT+CGG - chr7_2:86406023-86406042 Msa1085610:intron 55.0%
!! TCCGAGTCGCCGGTTTAATC+CGG + chr7_2:86406027-86406046 None:intergenic 55.0%
TCTTCAATCCTCCGAGTCGC+CGG + chr7_2:86406037-86406056 None:intergenic 55.0%
GCCTTGAGTGGGAATCGAAC+TGG - chr7_2:86406149-86406168 Msa1085610:CDS 55.0%
GCCAGTTCGATTCCCACTCA+AGG + chr7_2:86406153-86406172 None:intergenic 55.0%
GCCTTGAGTGGGAATCGAAC+TGG - chr7_2:86406149-86406168 Msa1085610:CDS 55.0%
GCCAGTTCGATTCCCACTCA+AGG + chr7_2:86406153-86406172 None:intergenic 55.0%
CCGGATCAACTCGGATGACT+CGG + chr7_2:86406862-86406881 None:intergenic 55.0%
!! CCGAGTCATCCGAGTTGATC+CGG - chr7_2:86406859-86406878 Msa1085610:intron 55.0%
GTCGAACCGCATGACTGAAC+CGG + chr7_2:86406881-86406900 None:intergenic 55.0%
CGGTTCGACCAATGACTCAG+TGG - chr7_2:86406892-86406911 Msa1085610:intron 55.0%
TCTATTGTGGCGGTGCGTGT+TGG - chr7_2:86406989-86407008 Msa1085610:intron 55.0%
CTATTGTGGCGGTGCGTGTT+GGG - chr7_2:86406990-86407009 Msa1085610:intron 55.0%
TATTGTGGCGGTGCGTGTTG+GGG - chr7_2:86406991-86407010 Msa1085610:intron 55.0%
! TGCGTGTTGGGGTGTCTACT+GGG - chr7_2:86407002-86407021 Msa1085610:intron 55.0%
GCGAAAGCAATGGCTGACAG+CGG - chr7_2:86407094-86407113 Msa1085610:intron 55.0%
GTCCCAAAGGGCTACCAAGA+AGG - chr7_2:86407193-86407212 Msa1085610:intron 55.0%
! CTGCCTTCTTGGTAGCCCTT+TGG + chr7_2:86407199-86407218 None:intergenic 55.0%
GGAGCAAGGCCCTCTAAATC+AGG - chr7_2:86407260-86407279 Msa1085610:intron 55.0%
TTGGTGAGGATCTTGGGGAC+TGG - chr7_2:86407890-86407909 Msa1085610:intron 55.0%
CCAAGCTTCTTGCCACCAAG+CGG - chr7_2:86407966-86407985 Msa1085610:intron 55.0%
CAAGCTTCTTGCCACCAAGC+GGG - chr7_2:86407967-86407986 Msa1085610:intron 55.0%
ATCAAGCAGATCCCGCTTGG+TGG + chr7_2:86407981-86408000 None:intergenic 55.0%
ACGATCAAGCAGATCCCGCT+TGG + chr7_2:86407984-86408003 None:intergenic 55.0%
GGGGCTACATAGAGGCAGTT+AGG - chr7_2:86408243-86408262 Msa1085610:intron 55.0%
GCGGAAACGGATGGTTGCTA+AGG + chr7_2:86408370-86408389 None:intergenic 55.0%
TGCTTACAGGCCAAGGGTCT+TGG - chr7_2:86409178-86409197 Msa1085610:intron 55.0%
GAAGATAGGAGAGACGGGCA+CGG + chr7_2:86410137-86410156 None:intergenic 55.0%
AAGCAGCCTTACCGCTGAGA+AGG + chr7_2:86410769-86410788 None:intergenic 55.0%
GGCCACCTGTATGTACGAAG+AGG + chr7_2:86410847-86410866 None:intergenic 55.0%
CGATCAGCTGGGTTCCTTTG+TGG - chr7_2:86410889-86410908 Msa1085610:intron 55.0%
GACCAAGATCCCACCCTCAC+TGG - chr7_2:86403441-86403460 Msa1085610:three_prime_UTR 60.0%
TGCCAGTGAGGGTGGGATCT+TGG + chr7_2:86403446-86403465 None:intergenic 60.0%
CTTCCTCTGTGCGCACCAAC+AGG + chr7_2:86405654-86405673 None:intergenic 60.0%
TGTTACCGCCTCGTCTTCGG+AGG + chr7_2:86405800-86405819 None:intergenic 60.0%
TGGATGCCACGCGTCGGAAA+CGG - chr7_2:86405862-86405881 Msa1085610:intron 60.0%
! CGGTTCTGGCCGAGTTTGAC+CGG + chr7_2:86406007-86406026 None:intergenic 60.0%
CGGTCAAACTCGGCCAGAAC+CGG - chr7_2:86406005-86406024 Msa1085610:intron 60.0%
! GGATTAAACCGGCGACTCGG+AGG - chr7_2:86406026-86406045 Msa1085610:intron 60.0%
!! GGCAGGGGTACTGGGTTACT+GGG + chr7_2:86406930-86406949 None:intergenic 60.0%
!! ATCGACTCGGCAGGGGTACT+GGG + chr7_2:86406938-86406957 None:intergenic 60.0%
!! ACTCGGCTCGGTCATCGACT+CGG + chr7_2:86406951-86406970 None:intergenic 60.0%
! GTGCGTGTTGGGGTGTCTAC+TGG - chr7_2:86407001-86407020 Msa1085610:intron 60.0%
! TTGGGGTGTCTACTGGGCTC+TGG - chr7_2:86407008-86407027 Msa1085610:intron 60.0%
! TGGGGTGTCTACTGGGCTCT+GGG - chr7_2:86407009-86407028 Msa1085610:intron 60.0%
GGTTGCTGGCGCGAAAGCAA+TGG - chr7_2:86407084-86407103 Msa1085610:intron 60.0%
TGGCTGACAGCGGTAAACGG+TGG - chr7_2:86407104-86407123 Msa1085610:intron 60.0%
! CCGCTTGGTGGCAAGAAGCT+TGG + chr7_2:86407969-86407988 None:intergenic 60.0%
! TCCAGTGGGGGCACAATTGC+CGG - chr7_2:86408679-86408698 Msa1085610:intron 60.0%
CGGAGAATGCATGCACCTGC+AGG + chr7_2:86408814-86408833 None:intergenic 60.0%
GACCCTGTTGGTGCGCACAG+AGG - chr7_2:86405648-86405667 Msa1085610:intron 65.0%
GGACTTCCGTTTCCGACGCG+TGG + chr7_2:86405871-86405890 None:intergenic 65.0%
GGACCGGTTGGACCGTGAAC+CGG - chr7_2:86405924-86405943 Msa1085610:intron 65.0%
!! CCACCGGTTCACGGTCCAAC+CGG + chr7_2:86405930-86405949 None:intergenic 65.0%
CGGTTGGACCGTGAACCGGT+GGG - chr7_2:86405928-86405947 Msa1085610:intron 65.0%
!! CCGGCTTACCCACCGGTTCA+CGG + chr7_2:86405939-86405958 None:intergenic 65.0%
CCGTGAACCGGTGGGTAAGC+CGG - chr7_2:86405936-86405955 Msa1085610:intron 65.0%
! GCTCGAACCGGCTTACCCAC+CGG + chr7_2:86405946-86405965 None:intergenic 65.0%
!! CGGCAGGGGTACTGGGTTAC+TGG + chr7_2:86406931-86406950 None:intergenic 65.0%
!! CATCGACTCGGCAGGGGTAC+TGG + chr7_2:86406939-86406958 None:intergenic 65.0%
!! CTCGGTCATCGACTCGGCAG+GGG + chr7_2:86406945-86406964 None:intergenic 65.0%
!! GCTCGGTCATCGACTCGGCA+GGG + chr7_2:86406946-86406965 None:intergenic 65.0%
ACCGGCAATTGTGCCCCCAC+TGG + chr7_2:86408683-86408702 None:intergenic 65.0%
! GCGGACGGCAGGGCATCACA+TGG - chr7_2:86405842-86405861 Msa1085610:intron 70.0%
CACGGTCCAACCGGTCCGAC+CGG + chr7_2:86405921-86405940 None:intergenic 70.0%
CCGGTTGGACCGTGAACCGG+TGG - chr7_2:86405927-86405946 Msa1085610:intron 70.0%
!! GGCTCGGTCATCGACTCGGC+AGG + chr7_2:86406947-86406966 None:intergenic 70.0%
!! CAGACTCGGCTCGGACCGGC+CGG - chr7_2:86405899-86405918 Msa1085610:intron 75.0%
GTCCAACCGGTCCGACCGGC+CGG + chr7_2:86405917-86405936 None:intergenic 75.0%
!!! CTCGGCTCGGACCGGCCGGT+CGG - chr7_2:86405903-86405922 Msa1085610:intron 80.0%
! CTCGGACCGGCCGGTCGGAC+CGG - chr7_2:86405908-86405927 Msa1085610:intron 80.0%
! GACCGGCCGGTCGGACCGGT+TGG - chr7_2:86405912-86405931 Msa1085610:intron 80.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 86403019 86411423 86403019 ID=Msa1085610;Name=Msa1085610
chr7_2 mRNA 86403019 86411423 86403019 ID=Msa1085610-mRNA-1;Parent=Msa1085610;Name=Msa1085610-mRNA-1;_AED=0.03;_eAED=0.03;_QI=17|1|1|1|1|1|7|444|388
chr7_2 exon 86403019 86403667 86403019 ID=Msa1085610-mRNA-1:exon:23400;Parent=Msa1085610-mRNA-1
chr7_2 exon 86405158 86405255 86405158 ID=Msa1085610-mRNA-1:exon:23399;Parent=Msa1085610-mRNA-1
chr7_2 exon 86405511 86405624 86405511 ID=Msa1085610-mRNA-1:exon:23398;Parent=Msa1085610-mRNA-1
chr7_2 exon 86405701 86405758 86405701 ID=Msa1085610-mRNA-1:exon:23397;Parent=Msa1085610-mRNA-1
chr7_2 exon 86406106 86406198 86406106 ID=Msa1085610-mRNA-1:exon:23396;Parent=Msa1085610-mRNA-1
chr7_2 exon 86410721 86410812 86410721 ID=Msa1085610-mRNA-1:exon:23395;Parent=Msa1085610-mRNA-1
chr7_2 exon 86410900 86411423 86410900 ID=Msa1085610-mRNA-1:exon:23394;Parent=Msa1085610-mRNA-1
chr7_2 five_prime_UTR 86411407 86411423 86411407 ID=Msa1085610-mRNA-1:five_prime_utr;Parent=Msa1085610-mRNA-1
chr7_2 CDS 86410900 86411406 86410900 ID=Msa1085610-mRNA-1:cds;Parent=Msa1085610-mRNA-1
chr7_2 CDS 86410721 86410812 86410721 ID=Msa1085610-mRNA-1:cds;Parent=Msa1085610-mRNA-1
chr7_2 CDS 86406106 86406198 86406106 ID=Msa1085610-mRNA-1:cds;Parent=Msa1085610-mRNA-1
chr7_2 CDS 86405701 86405758 86405701 ID=Msa1085610-mRNA-1:cds;Parent=Msa1085610-mRNA-1
chr7_2 CDS 86405511 86405624 86405511 ID=Msa1085610-mRNA-1:cds;Parent=Msa1085610-mRNA-1
chr7_2 CDS 86405158 86405255 86405158 ID=Msa1085610-mRNA-1:cds;Parent=Msa1085610-mRNA-1
chr7_2 CDS 86403463 86403667 86403463 ID=Msa1085610-mRNA-1:cds;Parent=Msa1085610-mRNA-1
chr7_2 three_prime_UTR 86403019 86403462 86403019 ID=Msa1085610-mRNA-1:three_prime_utr;Parent=Msa1085610-mRNA-1
Gene Sequence

>Msa1085610

ATGTATGGTCATCTGAAGAAGCAAGTCTCAACAGTGATGGCGGGGTTTGAGTTTCTGAGTGTGAAGCCATACACAGCTCCTTCATGGGCATCCTACCTAGACCCCATACCTTCTCATATTGTATCTCTTGCCCATCTTCCGACTCCGATTCACAGATGGAAGCTTCCGAACCTGCCAGCAAATACAGAAGTGTGGCTGAAGCGCGACGATCTTTCTGGAATGCAATTGAGTGGAAACAAAGTGCGGAAATTGGAGTTCTTGATGGCCGATGCAATTGCTGAATCCGCTGATTCTGTTATTACAATTGGAGGCATCCAAAGTAATCACTGTCGTGCCACTGCCGTTGCTGCTAAGTATTTGAATCTCGATCCTTTCCTTATACTCCGCACTTCTAAGCATCTCGTTGACCAAGATCCCACCCTCACTGGCAATCTTCTTGTTGAGCGTTTGATTGGAGCTCACCTTCAACTTATATCCAAAGAAGAATATTCACAAATTGGAAGTGTCACACTTGCCAACCTCCTCAAAGAAAAGCTCATCAACCAAGGGAGGAGGCCATATGTTATTCCTGTTGGCGGATCAAACTCTCTCGGAACATGGGGCTACATAGAGGCAGTTAGGGAGATTGAGCTGCAGATTCAAAGTGGAACAAGCAATGTCAAGTTTGATGATATTGTTGTGGCTTGTGGCAGTGGGGGCACAATTGCCGGTTTAGCACTGGGTTCATCATTGAGTAGCTTGAAAGCAAGGGTGCATGCATTCTCCGTTTGTGATGACCCGGATTACTTCCACAACTTTGTTCAAGGCTTGCTTGACGGACTCAAAGCTGGTGTTAGCTCTAGAGATATTGTCCACATACAAAATGCCAAGGGTCTTGGCTATGCAATGAACACTTCTGAGGAGCTTAGTTTTGTAAAAGAAGTTGCTGAAGCTACAGGTGTTGTTCTTGACCCGGTATACAGCGGTAAGGCTGCTTATGCAATGCTGAAAGATATGAATGAAAATCCAAAGAAATGGGAAGGAAGGAAGATCCTCTTCGTACATACAGGTGGCCTCTTAGGATTGTATGACAAGGTCGATCAGCTGGGTTCCTTTGTGGGGAATTGGCAACGAATGGATGTTAATGAATCTGTTCCCAGGCAAGATGGAATTGGAAAGATGTTCTAG

Protein sequence

>Msa1085610

MYGHLKKQVSTVMAGFEFLSVKPYTAPSWASYLDPIPSHIVSLAHLPTPIHRWKLPNLPANTEVWLKRDDLSGMQLSGNKVRKLEFLMADAIAESADSVITIGGIQSNHCRATAVAAKYLNLDPFLILRTSKHLVDQDPTLTGNLLVERLIGAHLQLISKEEYSQIGSVTLANLLKEKLINQGRRPYVIPVGGSNSLGTWGYIEAVREIELQIQSGTSNVKFDDIVVACGSGGTIAGLALGSSLSSLKARVHAFSVCDDPDYFHNFVQGLLDGLKAGVSSRDIVHIQNAKGLGYAMNTSEELSFVKEVAEATGVVLDPVYSGKAAYAMLKDMNENPKKWEGRKILFVHTGGLLGLYDKVDQLGSFVGNWQRMDVNESVPRQDGIGKMF*