AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1127080

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1127080 MtrunA17_Chr7g0269001 97.755 490 8 1 1 487 1 490 0.0 997
Msa1127080 MtrunA17_Chr8g0369451 26.978 278 165 6 238 478 7 283 1.75e-21 97.1
Msa1127080 MtrunA17_Chr5g0409421 26.042 288 171 7 228 478 1 283 2.51e-21 96.3
Msa1127080 MtrunA17_Chr2g0286501 31.373 255 151 10 235 472 49 296 4.40e-20 94.4
Msa1127080 MtrunA17_Chr1g0173921 29.730 259 161 12 234 476 3 256 4.98e-20 94.0
Msa1127080 MtrunA17_Chr4g0051191 28.682 258 169 10 241 485 169 424 1.36e-19 90.9
Msa1127080 MtrunA17_Chr8g0386981 32.950 261 148 14 241 481 414 667 1.42e-19 92.4
Msa1127080 MtrunA17_Chr8g0374701 29.670 273 144 11 239 476 129 388 2.16e-19 91.3
Msa1127080 MtrunA17_Chr1g0157131 27.757 263 155 9 239 476 78 330 2.35e-19 90.9
Msa1127080 MtrunA17_Chr4g0045261 29.304 273 142 10 239 476 141 397 4.48e-19 90.1
Msa1127080 MtrunA17_Chr4g0059951 26.648 349 211 12 161 485 11 338 4.53e-19 90.1
Msa1127080 MtrunA17_Chr7g0260191 30.859 256 160 10 235 476 4 256 6.48e-19 89.7
Msa1127080 MtrunA17_Chr5g0402551 29.930 284 151 13 227 476 125 394 1.32e-18 89.0
Msa1127080 MtrunA17_Chr1g0202831 32.061 262 149 13 241 481 417 670 1.85e-18 89.0
Msa1127080 MtrunA17_Chr7g0258051 30.075 266 161 12 229 476 10 268 6.48e-18 86.7
Msa1127080 MtrunA17_Chr5g0419441 27.376 263 172 9 233 480 237 495 2.48e-17 85.1
Msa1127080 MtrunA17_Chr1g0190831 30.859 256 160 11 235 476 4 256 2.56e-17 84.7
Msa1127080 MtrunA17_Chr6g0479211 28.464 267 166 11 234 478 55 318 3.02e-17 82.8
Msa1127080 MtrunA17_Chr3g0130151 29.167 264 166 11 232 478 241 500 4.03e-17 84.3
Msa1127080 MtrunA17_Chr7g0256001 28.763 299 155 14 227 486 132 411 4.59e-17 84.0
Msa1127080 MtrunA17_Chr5g0402601 26.894 264 171 9 232 475 369 630 1.63e-16 82.4
Msa1127080 MtrunA17_Chr4g0074811 26.996 263 157 10 239 476 95 347 2.08e-16 82.0
Msa1127080 MtrunA17_Chr8g0339221 23.611 288 181 5 238 487 7 293 2.64e-16 80.9
Msa1127080 MtrunA17_Chr7g0274941 31.179 263 160 13 232 476 13 272 2.99e-16 79.3
Msa1127080 MtrunA17_Chr8g0345801 27.488 211 134 7 228 425 8 212 5.14e-16 78.2
Msa1127080 MtrunA17_Chr1g0185221 28.516 256 166 10 235 476 4 256 1.11e-15 79.7
Msa1127080 MtrunA17_Chr1g0173541 26.568 271 167 10 240 487 57 318 1.28e-15 79.3
Msa1127080 MtrunA17_Chr1g0205421 27.652 264 162 11 239 482 16 270 1.30e-15 79.0
Msa1127080 MtrunA17_Chr1g0170551 28.346 254 165 10 235 476 7 255 1.91e-15 79.7
Msa1127080 MtrunA17_Chr2g0321841 29.278 263 158 12 234 476 2 256 5.96e-15 77.8
Msa1127080 MtrunA17_Chr3g0114511 27.509 269 162 9 239 486 36 292 1.52e-14 75.9
Msa1127080 MtrunA17_Chr3g0140631 25.442 283 199 6 204 476 6 286 2.27e-14 73.9
Msa1127080 MtrunA17_Chr1g0190131 28.185 259 170 9 232 476 6 262 6.98e-14 72.0
Msa1127080 MtrunA17_Chr4g0059121 31.126 151 95 5 332 474 161 310 7.58e-14 72.8
Msa1127080 MtrunA17_Chr3g0132591 29.344 259 156 9 234 476 111 358 9.92e-14 73.2
Msa1127080 MtrunA17_Chr2g0310761 24.627 268 170 11 233 473 937 1199 1.04e-13 73.9
Msa1127080 MtrunA17_Chr8g0346081 27.106 273 176 12 230 485 11 277 1.21e-13 72.8
Msa1127080 MtrunA17_Chr2g0310781 23.881 268 170 11 234 473 844 1105 1.72e-13 73.2
Msa1127080 MtrunA17_Chr3g0133541 29.297 256 161 12 241 477 313 567 2.19e-13 72.8
Msa1127080 MtrunA17_Chr8g0357611 24.719 267 169 11 234 473 1369 1630 2.24e-13 73.2
Msa1127080 MtrunA17_Chr3g0102451 27.737 274 173 10 184 436 269 538 2.58e-13 72.4
Msa1127080 MtrunA17_Chr6g0453711 26.721 247 146 11 205 426 74 310 4.21e-13 71.6
Msa1127080 MtrunA17_Chr7g0218071 24.695 328 182 14 211 481 89 408 5.68e-13 71.2
Msa1127080 MtrunA17_Chr4g0061141 27.907 215 141 8 224 426 93 305 6.74e-13 71.2
Msa1127080 MtrunA17_Chr4g0066691 26.908 249 163 9 190 426 63 304 7.46e-13 70.9
Msa1127080 MtrunA17_Chr2g0286421 28.112 249 160 10 190 426 61 302 9.15e-13 70.5
Msa1127080 MtrunA17_Chr7g0267771 24.254 268 169 9 234 476 86 344 1.03e-12 70.1
Msa1127080 MtrunA17_Chr1g0211611 32.484 157 87 8 332 475 399 549 1.25e-12 70.1
Msa1127080 MtrunA17_Chr5g0441691 26.692 266 154 12 239 476 72 324 1.48e-12 69.7
Msa1127080 MtrunA17_Chr1g0196631 25.940 266 165 11 234 472 899 1159 1.52e-12 70.5
Msa1127080 MtrunA17_Chr8g0384001 26.481 287 162 14 220 476 16 283 1.71e-12 69.7
Msa1127080 MtrunA17_Chr2g0305141 25.275 273 166 11 233 475 1081 1345 1.81e-12 70.1
Msa1127080 MtrunA17_Chr3g0131861 28.169 213 138 8 226 426 88 297 1.81e-12 69.7
Msa1127080 MtrunA17_Chr6g0461841 25.746 268 165 11 234 473 966 1227 2.09e-12 70.1
Msa1127080 MtrunA17_Chr5g0396361 29.767 215 137 9 224 426 128 340 2.60e-12 69.3
Msa1127080 MtrunA17_Chr8g0355131 27.230 213 115 7 291 476 105 304 2.89e-12 68.9
Msa1127080 MtrunA17_Chr1g0197721 25.943 212 125 7 234 421 50 253 3.83e-12 68.6
Msa1127080 MtrunA17_Chr1g0205471 25.784 287 165 13 221 478 13 280 3.89e-12 68.6
Msa1127080 MtrunA17_Chr8g0385971 27.358 212 141 7 226 426 81 290 5.11e-12 68.2
Msa1127080 MtrunA17_Chr7g0276111 26.545 275 147 13 239 476 148 404 7.11e-12 67.8
Msa1127080 MtrunA17_Chr7g0273851 25.862 290 157 13 222 485 14 271 8.27e-12 67.8
Msa1127080 MtrunA17_Chr1g0176421 26.259 278 151 14 234 476 159 417 1.85e-11 66.6
Msa1127080 MtrunA17_Chr3g0129771 28.293 205 110 8 239 420 37 227 2.68e-11 65.9
Msa1127080 MtrunA17_Chr5g0432541 24.904 261 165 12 241 478 33 285 3.15e-11 65.9
Msa1127080 MtrunA17_Chr4g0000431 26.471 272 160 11 239 481 28 288 3.29e-11 65.9
Msa1127080 MtrunA17_Chr6g0455931 26.255 259 164 13 241 478 35 287 4.55e-11 65.1
Msa1127080 MtrunA17_Chr5g0397101 25.670 261 159 9 240 475 72 322 4.98e-11 65.1
Msa1127080 MtrunA17_Chr3g0141871 24.088 274 177 10 222 484 19 272 5.64e-11 64.3
Msa1127080 MtrunA17_Chr4g0074791 25.292 257 168 9 239 475 99 351 6.71e-11 64.7
Msa1127080 MtrunA17_Chr8g0383451 27.723 202 123 8 241 426 4 198 7.36e-11 64.3
Msa1127080 MtrunA17_Chr6g0450571 25.442 283 165 11 234 484 15 283 7.50e-11 64.7
Msa1127080 MtrunA17_Chr3g0107011 29.279 222 130 10 284 487 64 276 7.54e-11 64.3
Msa1127080 MtrunA17_Chr3g0099951 24.752 202 142 5 239 431 18 218 8.89e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1127080 AT1G02970.1 59.138 487 187 6 2 480 15 497 0.0 588
Msa1127080 AT4G19110.1 26.978 278 165 6 238 478 7 283 5.75e-23 102
Msa1127080 AT4G19110.2 26.978 278 165 6 238 478 7 283 6.10e-23 101
Msa1127080 AT5G45430.2 26.619 278 166 6 238 478 7 283 1.07e-20 95.5
Msa1127080 AT5G45430.1 26.619 278 166 6 238 478 7 283 1.11e-20 95.1
Msa1127080 AT3G20860.1 29.851 268 170 11 234 487 3 266 3.82e-20 92.8
Msa1127080 AT1G49580.1 30.961 281 148 12 239 487 154 420 8.58e-20 92.8
Msa1127080 AT3G19100.1 30.000 270 144 11 239 476 148 404 1.50e-19 92.0
Msa1127080 AT1G76040.2 29.434 265 156 11 234 476 113 368 1.89e-19 91.7
Msa1127080 AT1G76040.3 29.434 265 156 11 234 476 113 368 2.14e-19 91.3
Msa1127080 AT1G08650.1 29.278 263 167 7 239 484 19 279 1.39e-18 86.3
Msa1127080 AT3G12200.1 27.612 268 177 9 234 487 18 282 5.22e-18 87.4
Msa1127080 AT4G19110.3 28.000 225 125 5 291 478 3 227 1.16e-17 85.5
Msa1127080 AT3G63280.2 30.078 256 162 11 235 476 4 256 2.40e-17 85.1
Msa1127080 AT3G63280.3 30.078 256 162 11 235 476 4 256 2.40e-17 85.1
Msa1127080 AT3G63280.1 30.078 256 162 11 235 476 4 256 2.40e-17 85.1
Msa1127080 AT3G50530.1 29.371 286 150 13 227 476 139 408 2.52e-17 85.5
Msa1127080 AT3G63280.4 30.078 256 162 11 235 476 58 310 4.63e-17 84.3
Msa1127080 AT4G12020.3 27.675 271 162 11 225 482 1616 1865 7.76e-17 84.3
Msa1127080 AT4G12020.10 27.675 271 162 11 225 482 1608 1857 9.83e-17 84.3
Msa1127080 AT1G08650.2 29.200 250 158 7 239 471 19 266 1.58e-16 80.1
Msa1127080 AT4G13020.1 25.424 295 178 8 228 485 1 290 1.87e-16 82.0
Msa1127080 AT4G13020.7 25.424 295 178 8 228 485 1 290 1.88e-16 81.3
Msa1127080 AT4G13020.4 25.424 295 178 8 228 485 1 290 2.12e-16 81.6
Msa1127080 AT4G13020.6 25.424 295 178 8 228 485 1 290 2.29e-16 81.3
Msa1127080 AT4G08470.1 27.413 259 171 10 233 477 301 556 2.80e-16 82.0
Msa1127080 AT4G04700.1 26.996 263 161 10 239 476 32 288 3.36e-16 81.3
Msa1127080 AT4G13020.2 25.424 295 178 8 228 485 9 298 3.36e-16 81.3
Msa1127080 AT4G13020.3 25.424 295 178 8 228 485 9 298 3.38e-16 81.3
Msa1127080 AT1G18890.1 28.571 266 157 10 240 481 68 324 3.93e-16 81.3
Msa1127080 AT5G28290.1 28.405 257 169 9 235 478 4 258 4.35e-16 81.3
Msa1127080 AT5G28290.2 28.405 257 169 9 235 478 4 258 4.35e-16 81.3
Msa1127080 AT5G28290.3 28.405 257 169 9 235 478 4 258 4.41e-16 81.3
Msa1127080 AT3G12200.2 26.619 278 177 10 234 487 18 292 5.62e-16 80.9
Msa1127080 AT1G69220.1 27.376 263 172 9 233 480 247 505 5.71e-16 81.3
Msa1127080 AT4G04710.2 25.391 256 168 7 239 476 40 290 5.84e-16 80.9
Msa1127080 AT3G10540.1 25.095 263 162 9 234 469 44 298 6.88e-16 80.5
Msa1127080 AT4G04710.4 25.188 266 169 7 239 476 40 303 1.06e-15 80.1
Msa1127080 AT1G50240.3 30.040 253 164 10 234 476 5 254 1.12e-15 80.9
Msa1127080 AT1G50240.2 30.040 253 164 10 234 476 5 254 1.12e-15 80.9
Msa1127080 AT4G04710.1 25.188 266 169 7 239 476 40 303 1.15e-15 79.7
Msa1127080 AT1G54510.4 29.545 264 166 11 238 483 7 268 1.27e-15 80.1
Msa1127080 AT1G54510.2 29.545 264 166 11 238 483 7 268 1.27e-15 80.1
Msa1127080 AT1G54510.1 29.545 264 166 11 238 483 7 268 1.27e-15 80.1
Msa1127080 AT1G54510.3 29.545 264 166 11 238 483 7 268 1.27e-15 80.1
Msa1127080 AT4G21940.3 26.054 261 162 10 239 476 106 358 1.35e-15 79.7
Msa1127080 AT4G21940.2 26.054 261 162 10 239 476 106 358 1.68e-15 79.3
Msa1127080 AT3G21220.2 24.345 267 178 9 233 481 68 328 1.76e-15 78.2
Msa1127080 AT3G21220.1 24.345 267 178 9 233 481 68 328 1.76e-15 78.2
Msa1127080 AT4G29810.1 26.119 268 175 11 233 480 68 332 1.79e-15 78.2
Msa1127080 AT4G21940.1 26.054 261 162 10 239 476 106 358 1.84e-15 79.3
Msa1127080 AT4G29810.2 26.119 268 175 11 233 480 77 341 1.85e-15 78.6
Msa1127080 AT1G12680.1 28.679 265 156 11 241 484 113 365 1.99e-15 79.0
Msa1127080 AT5G12480.1 24.308 325 200 12 178 475 9 314 2.76e-15 79.0
Msa1127080 AT5G04510.2 24.715 263 163 9 234 469 43 297 3.51e-15 77.8
Msa1127080 AT5G04510.1 24.715 263 163 9 234 469 43 297 3.67e-15 78.2
Msa1127080 AT3G15220.1 26.236 263 181 7 235 486 15 275 6.49e-15 77.8
Msa1127080 AT5G66850.2 26.616 263 171 9 241 483 352 612 9.24e-15 77.4
Msa1127080 AT5G66850.1 26.616 263 171 9 241 483 352 612 9.55e-15 77.4
Msa1127080 AT1G12580.1 26.568 271 156 10 239 480 48 304 1.01e-14 77.0
Msa1127080 AT5G19450.2 26.415 265 164 9 240 481 62 318 1.22e-14 76.6
Msa1127080 AT5G19450.1 26.415 265 164 9 240 481 62 318 1.22e-14 76.6
Msa1127080 AT4G04695.1 25.843 267 159 10 239 476 32 288 1.39e-14 76.3
Msa1127080 AT4G13020.5 23.607 305 180 10 228 485 1 299 1.72e-14 75.9
Msa1127080 AT4G13020.8 23.607 305 180 10 228 485 1 299 2.47e-14 75.1
Msa1127080 AT2G45490.1 25.000 256 176 6 233 476 20 271 2.76e-14 73.9
Msa1127080 AT1G69220.2 27.626 257 167 9 239 480 226 478 3.77e-14 75.5
Msa1127080 AT1G30270.1 27.885 208 137 7 291 486 88 294 5.48e-14 74.7
Msa1127080 AT1G30270.2 27.885 208 137 7 291 486 88 294 5.78e-14 74.3
Msa1127080 AT2G25880.1 26.070 257 172 7 233 476 23 274 1.34e-13 71.6
Msa1127080 AT3G49370.1 29.885 174 93 6 264 421 180 340 1.42e-13 73.6
Msa1127080 AT2G25880.4 26.070 257 172 7 233 476 36 287 1.54e-13 71.6
Msa1127080 AT1G30270.3 30.588 170 107 6 327 486 29 197 1.60e-13 72.4
Msa1127080 AT3G57530.2 25.455 275 165 12 240 487 68 329 1.89e-13 72.8
Msa1127080 AT4G29810.3 26.054 261 170 11 233 473 77 334 2.31e-13 71.6
Msa1127080 AT1G23700.2 28.889 270 164 13 234 484 15 275 4.27e-13 71.2
Msa1127080 AT3G57530.1 25.455 275 165 12 240 487 68 329 4.29e-13 72.0
Msa1127080 AT1G01140.3 25.275 273 181 9 229 483 12 279 4.32e-13 71.6
Msa1127080 AT1G01140.1 25.275 273 181 9 229 483 12 279 4.42e-13 71.6
Msa1127080 AT5G50860.1 28.365 208 136 7 230 426 109 314 4.48e-13 72.0
Msa1127080 AT1G79570.2 25.180 278 173 13 225 473 953 1224 5.91e-13 72.0
Msa1127080 AT1G79570.1 25.180 278 173 13 225 473 953 1224 5.91e-13 72.0
Msa1127080 AT1G23700.3 28.889 270 164 13 234 484 15 275 5.92e-13 71.2
Msa1127080 AT4G36070.1 28.000 200 116 6 241 421 77 267 6.01e-13 71.6
Msa1127080 AT5G50860.2 28.365 208 136 7 230 426 109 314 6.41e-13 71.2
Msa1127080 AT1G23700.1 28.889 270 164 13 234 484 15 275 6.76e-13 71.2
Msa1127080 AT5G58350.1 27.586 261 162 14 239 478 23 277 7.70e-13 71.2
Msa1127080 AT4G36070.2 28.000 200 116 6 241 421 77 267 7.92e-13 71.2
Msa1127080 AT1G49160.2 28.155 206 111 8 239 421 32 223 1.02e-12 70.9
Msa1127080 AT1G54610.1 26.693 251 165 9 188 426 75 318 1.16e-12 70.5
Msa1127080 AT1G54610.3 26.693 251 165 9 188 426 75 318 1.16e-12 70.5
Msa1127080 AT1G54610.2 26.693 251 165 9 188 426 75 318 1.16e-12 70.5
Msa1127080 AT3G50730.1 25.856 263 170 9 232 472 33 292 1.27e-12 69.7
Msa1127080 AT2G38910.1 25.228 329 182 14 188 476 86 390 1.36e-12 70.5
Msa1127080 AT5G04510.3 25.943 212 125 7 234 421 43 246 1.76e-12 68.6
Msa1127080 AT3G23000.1 25.893 224 148 7 277 486 69 288 2.10e-12 69.3
Msa1127080 AT5G24360.1 28.044 271 140 11 257 478 480 744 2.19e-12 70.1
Msa1127080 AT4G04740.4 25.620 242 149 10 258 476 92 325 2.21e-12 69.7
Msa1127080 AT4G04740.6 25.620 242 149 10 258 476 92 325 2.21e-12 69.7
Msa1127080 AT4G04740.5 25.620 242 149 10 258 476 92 325 2.21e-12 69.7
Msa1127080 AT4G04740.3 25.620 242 149 10 258 476 92 325 2.21e-12 69.7
Msa1127080 AT4G04740.1 25.620 242 149 10 258 476 92 325 2.21e-12 69.7
Msa1127080 AT4G04740.7 25.620 242 149 10 258 476 92 325 2.21e-12 69.7
Msa1127080 AT5G24360.2 28.044 271 140 11 257 478 486 750 2.40e-12 70.1
Msa1127080 AT2G26980.5 26.540 211 138 6 284 480 64 271 2.49e-12 68.9
Msa1127080 AT2G26980.1 26.540 211 138 6 284 480 64 271 2.59e-12 68.9
Msa1127080 AT1G16270.1 24.719 267 169 11 234 473 862 1123 2.72e-12 70.1
Msa1127080 AT1G16270.2 24.719 267 169 11 234 473 862 1123 2.72e-12 70.1
Msa1127080 AT1G16270.3 24.719 267 169 11 234 473 862 1123 2.72e-12 70.1
Msa1127080 AT5G24360.3 28.044 271 140 11 257 478 466 730 2.82e-12 69.7
Msa1127080 AT4G04740.2 25.620 242 149 10 258 476 92 325 3.17e-12 69.3
Msa1127080 AT2G26980.3 26.540 211 138 6 284 480 64 271 4.14e-12 68.6
Msa1127080 AT2G26980.4 26.540 211 138 6 284 480 74 281 4.23e-12 68.6
Msa1127080 AT3G07980.2 27.068 266 170 11 239 485 24 284 4.61e-12 69.3
Msa1127080 AT3G07980.1 27.068 266 170 11 239 485 24 284 5.09e-12 69.3
Msa1127080 AT5G12180.1 26.692 266 154 12 239 476 77 329 5.77e-12 68.2
Msa1127080 AT2G35050.1 24.286 280 169 12 234 484 973 1238 5.94e-12 68.9
Msa1127080 AT2G35050.2 24.286 280 169 12 234 484 973 1238 5.94e-12 68.9
Msa1127080 AT1G59580.2 24.272 309 170 12 222 476 19 317 6.16e-12 67.8
Msa1127080 AT1G59580.1 24.272 309 170 12 222 476 19 317 6.16e-12 67.8
Msa1127080 AT4G26890.1 29.070 172 109 8 316 479 88 254 7.65e-12 67.8
Msa1127080 AT5G19360.1 25.191 262 163 10 239 476 72 324 9.86e-12 67.8
Msa1127080 AT3G10660.2 25.180 278 169 11 228 476 175 442 1.14e-11 67.8
Msa1127080 AT3G10660.1 25.180 278 169 11 228 476 175 442 1.14e-11 67.8
Msa1127080 AT4G10010.2 26.522 230 148 9 215 426 130 356 1.25e-11 67.4
Msa1127080 AT3G53930.2 24.345 267 180 8 230 478 15 277 1.36e-11 67.4
Msa1127080 AT5G23580.1 24.809 262 160 10 241 476 28 278 1.41e-11 67.0
Msa1127080 AT3G53930.1 24.345 267 180 8 230 478 15 277 1.47e-11 67.4
Msa1127080 AT3G12200.4 26.570 207 137 7 294 487 12 216 1.52e-11 67.0
Msa1127080 AT1G04700.1 24.535 269 171 11 233 474 764 1027 1.65e-11 67.4
Msa1127080 AT1G04700.2 24.535 269 171 11 233 474 764 1027 1.65e-11 67.4
Msa1127080 AT3G45640.1 28.251 223 139 9 221 426 20 238 1.66e-11 66.2
Msa1127080 AT3G22420.4 25.573 262 140 11 239 474 99 331 1.92e-11 67.0
Msa1127080 AT3G22420.1 25.573 262 140 11 239 474 28 260 2.20e-11 66.6
Msa1127080 AT3G22420.3 25.573 262 140 11 239 474 99 331 2.21e-11 66.6
Msa1127080 AT3G22420.5 25.573 262 140 11 239 474 28 260 2.40e-11 66.6
Msa1127080 AT1G71530.2 27.273 209 137 8 230 426 142 347 2.44e-11 66.2
Msa1127080 AT1G53570.5 25.097 259 153 10 241 485 220 451 2.47e-11 66.6
Msa1127080 AT2G35890.2 24.138 261 165 9 240 476 137 388 2.54e-11 66.2
Msa1127080 AT2G35890.1 24.138 261 165 9 240 476 137 388 2.54e-11 66.2
Msa1127080 AT1G71530.4 26.606 218 145 8 230 435 142 356 4.00e-11 65.1
Msa1127080 AT5G14720.1 25.000 276 169 10 234 481 15 280 4.13e-11 65.9
Msa1127080 AT5G14720.2 25.000 276 169 10 234 481 15 280 4.13e-11 65.9
Msa1127080 AT1G71530.1 27.094 203 135 7 235 426 147 347 4.28e-11 65.9
Msa1127080 AT1G54960.1 27.692 260 161 10 241 477 74 329 4.37e-11 65.9
Msa1127080 AT1G54960.2 27.692 260 161 10 241 477 74 329 4.37e-11 65.9
Msa1127080 AT5G39420.1 29.064 203 131 8 235 426 105 305 4.46e-11 65.9
Msa1127080 AT4G24100.2 24.911 281 171 10 227 478 25 294 4.53e-11 65.9
Msa1127080 AT1G53050.2 27.092 251 147 11 215 448 108 339 4.54e-11 65.9
Msa1127080 AT1G53050.1 27.092 251 147 11 215 448 108 339 4.54e-11 65.9
Msa1127080 AT4G30960.1 26.389 216 131 9 291 487 81 287 4.66e-11 65.1
Msa1127080 AT5G10930.1 25.581 258 160 9 241 476 18 265 4.67e-11 65.1
Msa1127080 AT4G24100.1 24.911 281 171 10 227 478 25 294 5.06e-11 65.5
Msa1127080 AT1G71530.3 27.273 209 137 8 230 426 142 347 5.70e-11 65.1
Msa1127080 AT4G24100.4 24.911 281 171 10 227 478 41 310 5.73e-11 65.5
Msa1127080 AT4G24100.3 24.911 281 171 10 227 478 41 310 5.80e-11 65.5
Msa1127080 AT4G08470.2 31.333 150 95 5 233 376 301 448 6.04e-11 65.1
Msa1127080 AT1G35670.1 24.345 267 177 9 230 476 21 282 6.10e-11 65.1
Msa1127080 AT4G23650.1 27.203 261 157 11 240 476 83 334 6.71e-11 65.1
Msa1127080 AT3G59790.1 28.141 199 132 7 238 426 63 260 6.94e-11 64.3
Msa1127080 AT1G48260.1 29.208 202 125 9 281 468 59 256 7.66e-11 64.7
Msa1127080 AT5G55090.1 26.012 173 117 7 316 480 89 258 9.47e-11 64.3

Find 138 sgRNAs with CRISPR-Local

Find 340 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTTCCTTCCCCTTGATTT+TGG 0.064851 7_3:-78574228 None:intergenic
GTCTATAAGCTTGGTGATTT+TGG 0.139018 7_3:+78577658 Msa1127080:CDS
TTCAATTTCTCCGGGGATTT+AGG 0.142730 7_3:-78574750 None:intergenic
CCATCATAAGCTGTAAATTT+AGG 0.146319 7_3:-78576736 None:intergenic
CTTAAGGCCCTGTCGAAAAT+TGG 0.161314 7_3:-78578687 None:intergenic
AAACAACAGGCAAACATTTC+TGG 0.179440 7_3:-78578963 None:intergenic
CATAGGGATCTGTCTCCTTT+TGG 0.182775 7_3:-78576543 None:intergenic
CTTTAGTAACCCCTATTTAA+AGG 0.192157 7_3:+78576513 Msa1127080:CDS
TTGGGAAAGGTCCTTTAAAT+AGG 0.227358 7_3:-78576524 None:intergenic
TACCTGCACATTTGGATCTT+TGG 0.232933 7_3:-78576570 None:intergenic
CTGCAGCTACATTGCGTTGC+AGG 0.263739 7_3:+78576473 Msa1127080:CDS
CCAAAAGACATTCACAAAAT+TGG 0.268877 7_3:-78578805 None:intergenic
GGTGGTCATAATTCTCATTA+AGG 0.271396 7_3:-78577750 None:intergenic
TCAATTTCTCCGGGGATTTA+GGG 0.297218 7_3:-78574749 None:intergenic
TACTTCTCTTATCAGCAAAT+TGG 0.305098 7_3:+78576889 Msa1127080:intron
TTCAAAATCCGCTGATTATC+CGG 0.313101 7_3:-78574587 None:intergenic
CAAATCAAAATCCTTCCATT+AGG 0.314586 7_3:+78574382 Msa1127080:CDS
AATTCTCATTAAGGATTTCC+TGG 0.316106 7_3:-78577741 None:intergenic
ATGGACTTAAAATATATTAA+TGG 0.316976 7_3:+78578914 Msa1127080:three_prime_UTR
TGGGAAAGGTCCTTTAAATA+GGG 0.319625 7_3:-78576523 None:intergenic
TTCTTAGTCAAGATTTCTTC+TGG 0.320527 7_3:+78574445 Msa1127080:CDS
GAACGGTATCGATTTCAATA+AGG 0.332586 7_3:+78574607 Msa1127080:CDS
TTGTGGGCTATTATACTTCA+TGG 0.333207 7_3:+78577246 Msa1127080:CDS
CAGAATATGACACATAGTTC+TGG 0.336060 7_3:-78576453 None:intergenic
CATCATAAGCTGTAAATTTA+GGG 0.350243 7_3:-78576735 None:intergenic
TTCGTAGTATTCAATTTCTC+CGG 0.354380 7_3:-78574759 None:intergenic
TAGAGTGATACCTGCACATT+TGG 0.356447 7_3:-78576578 None:intergenic
CACCATGCGCGAGAATTATC+AGG 0.356776 7_3:-78578842 None:intergenic
CAAGTTCCACAACTTGTTGA+TGG 0.375134 7_3:-78576366 None:intergenic
TCTCTGAATCGAGAAGGTTC+TGG 0.376382 7_3:-78574359 None:intergenic
AAATCAAAATCCTTCCATTA+GGG 0.376468 7_3:+78574383 Msa1127080:CDS
TTGAAGGAGAAAAGCTTTGA+TGG 0.378377 7_3:+78577079 Msa1127080:intron
AAAGTATTAAAGCGAATAGA+TGG 0.379092 7_3:+78576937 Msa1127080:CDS
GACACATAGTTCTGGGCCTT+CGG 0.388439 7_3:-78576445 None:intergenic
GGTTCAAGCTCTGGCAGCAT+TGG 0.388551 7_3:+78577103 Msa1127080:CDS
CCTAAATTTACAGCTTATGA+TGG 0.388769 7_3:+78576736 Msa1127080:CDS
GTTCAAGCTCTGGCAGCATT+GGG 0.395220 7_3:+78577104 Msa1127080:CDS
TTAAGGCCCTGTCGAAAATT+GGG 0.408531 7_3:-78578686 None:intergenic
TTATTCTTCATCTTCTTCAC+TGG 0.421992 7_3:+78574161 Msa1127080:five_prime_UTR
AAATCACCTATGCCAGAATC+AGG 0.426205 7_3:+78577826 Msa1127080:CDS
ATGTACAACAGACACCTAAC+TGG 0.427081 7_3:-78578887 None:intergenic
AATAGTAGTAGTAGTGTGTT+TGG 0.427302 7_3:-78574140 None:intergenic
CTGGCAGAAGGCCTCTTAAC+CGG 0.429177 7_3:-78578648 None:intergenic
ATCAGCATCGGTAGCATCAT+TGG 0.430519 7_3:-78574409 None:intergenic
TTATCCGGAGTTATGTAATC+TGG 0.433913 7_3:-78574572 None:intergenic
TTTAAAGGACCTTTCCCAAA+AGG 0.437149 7_3:+78576528 Msa1127080:CDS
CATCAACAAGTTGTGGAACT+TGG 0.439973 7_3:+78576367 Msa1127080:CDS
GAAGGCCTCTTAACCGGATC+AGG 0.440181 7_3:-78578642 None:intergenic
AGCATCATTGGTAACCCTAA+TGG 0.442002 7_3:-78574397 None:intergenic
GTATTTGCAATGGTCCAGTT+AGG 0.445422 7_3:+78578873 Msa1127080:three_prime_UTR
TGTGTCTTTCTCTACCCAAC+TGG 0.450537 7_3:-78578994 None:intergenic
CGTGCATCTCCTTCCTCAAT+CGG 0.457649 7_3:-78577709 None:intergenic
GAAGAAGTTATAGTCGTTGT+TGG 0.463269 7_3:-78574330 None:intergenic
GTGTCTGTTGTACATTGTAA+TGG 0.464251 7_3:+78578895 Msa1127080:three_prime_UTR
TTTGATGGAGGTTCAAGCTC+TGG 0.468681 7_3:+78577094 Msa1127080:CDS
GGCAAGTTGCCACTCCTGCC+TGG 0.472331 7_3:+78577874 Msa1127080:CDS
TGATAGTAGCCTTCCGATTG+AGG 0.477068 7_3:+78577696 Msa1127080:CDS
AAAATCAAGGGGAAGGAAGA+AGG 0.477940 7_3:+78574230 Msa1127080:CDS
GGCTATGATCGATCCTGATC+CGG 0.478293 7_3:+78578629 Msa1127080:intron
TTGGATCTTTGGTTTGCATA+GGG 0.480814 7_3:-78576559 None:intergenic
TCGTAGTATTCAATTTCTCC+GGG 0.487268 7_3:-78574758 None:intergenic
AGAATATGACACATAGTTCT+GGG 0.493358 7_3:-78576452 None:intergenic
ATTCTCATTAAGGATTTCCT+GGG 0.493473 7_3:-78577740 None:intergenic
CACTGACTTTCATGAGATTG+AGG 0.501967 7_3:+78576774 Msa1127080:CDS
TTGTTGATGGTCACCAGAAA+AGG 0.502504 7_3:-78576353 None:intergenic
TCGATCCTGATCCGGTTAAG+AGG 0.503788 7_3:+78578637 Msa1127080:CDS
TTCTCCGGGGATTTAGGGCA+AGG 0.506459 7_3:-78574744 None:intergenic
TCTTATCAGCAAATTGGTCG+AGG 0.512410 7_3:+78576895 Msa1127080:intron
GAAAAGCAAAAGATGTCGAC+TGG 0.512432 7_3:+78574779 Msa1127080:CDS
ACAAGTTGTGGAACTTGGTA+AGG 0.513324 7_3:+78576372 Msa1127080:CDS
CTAAATTTACAGCTTATGAT+GGG 0.515148 7_3:+78576737 Msa1127080:CDS
TGCAGCTACATTGCGTTGCA+GGG 0.517169 7_3:+78576474 Msa1127080:CDS
TGGGTTCTCTACCAACTCTC+TGG 0.519512 7_3:-78578667 None:intergenic
CCAGAAAAGGTAGGGCTAAG+AGG 0.520423 7_3:-78576340 None:intergenic
CAGAAAAGGTAGGGCTAAGA+GGG 0.522352 7_3:-78576339 None:intergenic
CTACATAGATAGACAGATGA+TGG 0.526702 7_3:-78578760 None:intergenic
GTTATAGTCGTTGTTGGTAA+CGG 0.526884 7_3:-78574324 None:intergenic
GGAAGTAGCTGTTGATATAA+CGG 0.528442 7_3:+78576408 Msa1127080:CDS
TGACATCCTGATTCTGGCAT+AGG 0.528630 7_3:-78577832 None:intergenic
TTTGGATCTTTGGTTTGCAT+AGG 0.529211 7_3:-78576560 None:intergenic
AACCAAAGATCCAAATGTGC+AGG 0.530641 7_3:+78576568 Msa1127080:CDS
GCAATTTCAAAACTTGCTCA+AGG 0.530918 7_3:+78577906 Msa1127080:CDS
CGAACAACTGTACATTCAGA+TGG 0.538277 7_3:+78577277 Msa1127080:CDS
GAGGCCTTCTGCCAGAGAGT+TGG 0.541203 7_3:+78578656 Msa1127080:CDS
GGTTACCATGAGAACATTGT+GGG 0.544802 7_3:+78577230 Msa1127080:intron
TGGTGACCATCAACAAGTTG+TGG 0.545627 7_3:+78576360 Msa1127080:CDS
GGGAAAGGTCCTTTAAATAG+GGG 0.547532 7_3:-78576522 None:intergenic
TAGACAGATGATGGTCCAGC+AGG 0.554155 7_3:-78578751 None:intergenic
ACCGATGCTGATTCAAGAGA+TGG 0.558070 7_3:+78574420 Msa1127080:CDS
GTTGATATAACGGTAGCTGC+TGG 0.559132 7_3:+78576418 Msa1127080:CDS
AAACCCCAAAATCAAGGGGA+AGG 0.559167 7_3:+78574223 Msa1127080:CDS
ACGCAGTACACAGTTACAGC+TGG 0.560665 7_3:+78576978 Msa1127080:CDS
AAATAGGGGTTACTAAAGCA+AGG 0.563788 7_3:-78576508 None:intergenic
TAGCCCTTGCCCTAAATCCC+CGG 0.565880 7_3:+78574740 Msa1127080:CDS
AATAGCCCACAATGTTCTCA+TGG 0.571060 7_3:-78577235 None:intergenic
AGAAAATATCAACCTTGTCA+AGG 0.580681 7_3:-78577771 None:intergenic
TGAAATTGCAATGAATGACC+AGG 0.582007 7_3:-78577892 None:intergenic
AGTAGCCTTCCGATTGAGGA+AGG 0.582590 7_3:+78577700 Msa1127080:CDS
AATGAATGACCAGGCAGGAG+TGG 0.584677 7_3:-78577883 None:intergenic
AGATGCACGTTATATGCCCC+AGG 0.587833 7_3:+78577723 Msa1127080:CDS
GATTTGTCTCTGAATCGAGA+AGG 0.588616 7_3:-78574365 None:intergenic
CTTATCAGCAAATTGGTCGA+GGG 0.596939 7_3:+78576896 Msa1127080:intron
AGGTTACCATGAGAACATTG+TGG 0.597160 7_3:+78577229 Msa1127080:intron
ACTTGTCATAGATGGTGTCT+CGG 0.597463 7_3:+78576312 Msa1127080:intron
GATGGTCACCAGAAAAGGTA+GGG 0.598031 7_3:-78576348 None:intergenic
TCTACCAACTCTCTGGCAGA+AGG 0.598894 7_3:-78578660 None:intergenic
TACTCCAGATTACATAACTC+CGG 0.599238 7_3:+78574568 Msa1127080:CDS
TGATGGTCACCAGAAAAGGT+AGG 0.601997 7_3:-78576349 None:intergenic
ATCGAGAAGGTTCTGGAAGG+CGG 0.606702 7_3:-78574352 None:intergenic
CACCTGATAATTCTCGCGCA+TGG 0.607613 7_3:+78578840 Msa1127080:three_prime_UTR
CATCTCCTTCCTCAATCGGA+AGG 0.611201 7_3:-78577705 None:intergenic
TCTCCGGGGATTTAGGGCAA+GGG 0.611486 7_3:-78574743 None:intergenic
GCCATCTCTTGAATCAGCAT+CGG 0.612326 7_3:-78574421 None:intergenic
GGGTTACTAAAGCAAGGAGG+AGG 0.617439 7_3:-78576502 None:intergenic
AAGGAGAAAAGCTTTGATGG+AGG 0.617943 7_3:+78577082 Msa1127080:intron
AGTTACAGCTGGATACAGAA+AGG 0.621788 7_3:+78576989 Msa1127080:CDS
TTGTCCTTCTGCTAATAACT+CGG 0.621799 7_3:-78577336 None:intergenic
CATAGCTTATCTGTAAACAA+AGG 0.622293 7_3:+78577311 Msa1127080:CDS
ATTGCAATGAATGACCAGGC+AGG 0.623023 7_3:-78577888 None:intergenic
AAATATCAACCTTGTCAAGG+TGG 0.623552 7_3:-78577768 None:intergenic
TGGTAAGGACTCTGTTGCAG+AGG 0.626891 7_3:+78576387 Msa1127080:CDS
GGCTCCGAGTTATTAGCAGA+AGG 0.627136 7_3:+78577332 Msa1127080:CDS
TGCAAGTTCTGTATTTGCAA+TGG 0.627920 7_3:+78578863 Msa1127080:three_prime_UTR
GGAAGGAAGAAGGCACCACT+CGG 0.629021 7_3:+78574240 Msa1127080:CDS
GAATTATGACCACCTTGACA+AGG 0.636957 7_3:+78577759 Msa1127080:CDS
TCATTGGTAACCCTAATGGA+AGG 0.639494 7_3:-78574393 None:intergenic
TTCTCATTAAGGATTTCCTG+GGG 0.641683 7_3:-78577739 None:intergenic
GTCTTTCTCTACCCAACTGG+AGG 0.652542 7_3:-78578991 None:intergenic
TGAATCGAGAAGGTTCTGGA+AGG 0.655355 7_3:-78574355 None:intergenic
AAAAGCAAAAGATGTCGACT+GGG 0.667703 7_3:+78574780 Msa1127080:CDS
GATCAGTGTCGATTGTGTCA+TGG 0.668665 7_3:+78578782 Msa1127080:three_prime_UTR
GGTAGCTGCTGGTAAGCCGA+AGG 0.673285 7_3:+78576429 Msa1127080:CDS
ACATAACTCCGGATAATCAG+CGG 0.676793 7_3:+78574579 Msa1127080:CDS
CGTAGTATTCAATTTCTCCG+GGG 0.678931 7_3:-78574757 None:intergenic
ACTGCGATTTATACACGACA+AGG 0.681658 7_3:+78577585 Msa1127080:CDS
CTTGTGTTACTCGCACCGAG+TGG 0.719837 7_3:-78574255 None:intergenic
CTGCGATTTATACACGACAA+GGG 0.720865 7_3:+78577586 Msa1127080:CDS
TAGGGGTTACTAAAGCAAGG+AGG 0.776403 7_3:-78576505 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGTATTTATAAATAGTAAAA+TGG + chr7_3:78574953-78574972 Msa1127080:intron 10.0%
!!! ATTTATATTTTGTTTTGATT+TGG + chr7_3:78577539-78577558 Msa1127080:intron 10.0%
!!! TTTTTTACATAAATATTATC+AGG - chr7_3:78577634-78577653 None:intergenic 10.0%
!! GATAATATTTATGTAAAAAA+TGG + chr7_3:78577634-78577653 Msa1127080:CDS 10.0%
!!! ATTTTTAAATCTTTGAATCT+TGG - chr7_3:78574195-78574214 None:intergenic 15.0%
!! ATTTACTAATTTGAAAAACT+GGG + chr7_3:78574976-78574995 Msa1127080:intron 15.0%
!! GAAAATTAACTTAAAAAACA+TGG - chr7_3:78576088-78576107 None:intergenic 15.0%
!! ATGGACTTAAAATATATTAA+TGG + chr7_3:78578914-78578933 Msa1127080:three_prime_UTR 15.0%
!! GATTTACTAATTTGAAAAAC+TGG + chr7_3:78574975-78574994 Msa1127080:intron 20.0%
!!! AAGTTAATTTTCAACATATC+TGG + chr7_3:78576096-78576115 Msa1127080:intron 20.0%
!!! ATAAAATTCCTTTTGAAACA+TGG - chr7_3:78576802-78576821 None:intergenic 20.0%
!!! TTATGGTTTTCTCTTATTTA+AGG + chr7_3:78577135-78577154 Msa1127080:intron 20.0%
!! AATTATGTAAAAAGTTATGC+AGG - chr7_3:78577509-78577528 None:intergenic 20.0%
!!! TTTGTTTTGATTTGGAAATT+TGG + chr7_3:78577547-78577566 Msa1127080:intron 20.0%
!!! CATTTTTTGAATCTTAAAGA+AGG + chr7_3:78577853-78577872 Msa1127080:CDS 20.0%
!! TTAAAATATGTAAGCTACTA+TGG + chr7_3:78578130-78578149 Msa1127080:intron 20.0%
!! TTAAAATATGTAAGCTACTA+TGG + chr7_3:78578130-78578149 Msa1127080:intron 20.0%
!!! TGATGTTTTGATATTTATTC+AGG + chr7_3:78578608-78578627 Msa1127080:intron 20.0%
! AAATCAAAATCCTTCCATTA+GGG + chr7_3:78574383-78574402 Msa1127080:CDS 25.0%
! TCAATTTCGGAAAATGAAAA+GGG - chr7_3:78574487-78574506 None:intergenic 25.0%
!! AGACATTTTTCATGCAAATT+TGG - chr7_3:78575163-78575182 None:intergenic 25.0%
! TGTCTACAAAGTCATAAATT+GGG - chr7_3:78575482-78575501 None:intergenic 25.0%
! TTGTCTACAAAGTCATAAAT+TGG - chr7_3:78575483-78575502 None:intergenic 25.0%
! TTTATGACTTTGTAGACAAT+TGG + chr7_3:78575484-78575503 Msa1127080:intron 25.0%
! TTATGACTTTGTAGACAATT+GGG + chr7_3:78575485-78575504 Msa1127080:intron 25.0%
!!! TAGAAAAGTTGGTAGAAAAT+AGG + chr7_3:78575743-78575762 Msa1127080:intron 25.0%
!! TTTTCTAATGGTTTCTCTAA+TGG - chr7_3:78575878-78575897 None:intergenic 25.0%
! AACCATTAGAAAAGATTTAG+AGG + chr7_3:78575885-78575904 Msa1127080:intron 25.0%
! TGTACAAACAATTAAGCTAT+AGG - chr7_3:78576060-78576079 None:intergenic 25.0%
! AACATATCTGGTTAAATTGT+AGG + chr7_3:78576108-78576127 Msa1127080:intron 25.0%
! TTATACATTCCATGCTAAAT+AGG + chr7_3:78576190-78576209 Msa1127080:intron 25.0%
! AATGGGTAAATAAATAGCAT+TGG - chr7_3:78576273-78576292 None:intergenic 25.0%
! ACCATTATACAGTTAGAAAA+TGG - chr7_3:78576698-78576717 None:intergenic 25.0%
! CATCATAAGCTGTAAATTTA+GGG - chr7_3:78576738-78576757 None:intergenic 25.0%
! CTAAATTTACAGCTTATGAT+GGG + chr7_3:78576737-78576756 Msa1127080:CDS 25.0%
!! AAAGTATTAAAGCGAATAGA+TGG + chr7_3:78576937-78576956 Msa1127080:CDS 25.0%
! ACTGTTATGTAGATTTGATT+TGG + chr7_3:78577397-78577416 Msa1127080:intron 25.0%
!!! AAGGTTGATATTTTCTCTTT+GGG + chr7_3:78577778-78577797 Msa1127080:CDS 25.0%
! AATGAACTATGATTCTATTG+TGG + chr7_3:78578083-78578102 Msa1127080:intron 25.0%
! AATGAACTATGATTCTATTG+TGG + chr7_3:78578083-78578102 Msa1127080:intron 25.0%
! ATAAAACATGAGTTGTAAAC+AGG - chr7_3:78578428-78578447 None:intergenic 25.0%
TTATTCTTCATCTTCTTCAC+TGG + chr7_3:78574161-78574180 Msa1127080:five_prime_UTR 30.0%
CAAATCAAAATCCTTCCATT+AGG + chr7_3:78574382-78574401 Msa1127080:CDS 30.0%
TTCTTAGTCAAGATTTCTTC+TGG + chr7_3:78574445-78574464 Msa1127080:CDS 30.0%
CTCAATTTCGGAAAATGAAA+AGG - chr7_3:78574488-78574507 None:intergenic 30.0%
! AAATGGAATCGACTCAATTT+CGG - chr7_3:78574500-78574519 None:intergenic 30.0%
!!! ATTGAGTCGATTCCATTTTT+TGG + chr7_3:78574502-78574521 Msa1127080:intron 30.0%
CAAACTTCGAAACCAAAAAA+TGG - chr7_3:78574517-78574536 None:intergenic 30.0%
TTCGTAGTATTCAATTTCTC+CGG - chr7_3:78574762-78574781 None:intergenic 30.0%
GATCACATACTTCTTGAATA+TGG - chr7_3:78575252-78575271 None:intergenic 30.0%
AGAATAATCCGATGATTTCA+GGG - chr7_3:78575384-78575403 None:intergenic 30.0%
TAGAATAATCCGATGATTTC+AGG - chr7_3:78575385-78575404 None:intergenic 30.0%
GGACTAAACATATGTTCTAT+CGG + chr7_3:78575545-78575564 Msa1127080:intron 30.0%
! TCTACCAACTTTTCTACTAT+AGG - chr7_3:78575739-78575758 None:intergenic 30.0%
! GTTTCTCTAATGGTTTTCTT+AGG - chr7_3:78575868-78575887 None:intergenic 30.0%
! GACCTCTAAATCTTTTCTAA+TGG - chr7_3:78575890-78575909 None:intergenic 30.0%
GTTCTATCAAAGACCATATT+TGG - chr7_3:78575925-78575944 None:intergenic 30.0%
TGGTCTTTGATAGAACATTA+TGG + chr7_3:78575929-78575948 Msa1127080:intron 30.0%
! GCATGTTGATTAGAGAAAAT+GGG - chr7_3:78576290-78576309 None:intergenic 30.0%
! TGCATGTTGATTAGAGAAAA+TGG - chr7_3:78576291-78576310 None:intergenic 30.0%
AGAATATGACACATAGTTCT+GGG - chr7_3:78576455-78576474 None:intergenic 30.0%
CTTTAGTAACCCCTATTTAA+AGG + chr7_3:78576513-78576532 Msa1127080:CDS 30.0%
! ACTTTTCCACCATTAATGAA+CGG - chr7_3:78576624-78576643 None:intergenic 30.0%
!! GCCATTTTCTAACTGTATAA+TGG + chr7_3:78576694-78576713 Msa1127080:intron 30.0%
CCATCATAAGCTGTAAATTT+AGG - chr7_3:78576739-78576758 None:intergenic 30.0%
CCTAAATTTACAGCTTATGA+TGG + chr7_3:78576736-78576755 Msa1127080:CDS 30.0%
!! TGTTGAGAACTGTTTTGAAT+TGG + chr7_3:78576823-78576842 Msa1127080:intron 30.0%
TACTTCTCTTATCAGCAAAT+TGG + chr7_3:78576889-78576908 Msa1127080:intron 30.0%
! AAGGTATCATCTTCATACTA+CGG + chr7_3:78577008-78577027 Msa1127080:intron 30.0%
!! AGCATTGGGTTTGTATTTTA+TGG + chr7_3:78577118-78577137 Msa1127080:intron 30.0%
!! ATTTAAGGTTCAAGCATTGA+TGG + chr7_3:78577150-78577169 Msa1127080:intron 30.0%
GTTTATCATCTTACCTCTAT+AGG + chr7_3:78577209-78577228 Msa1127080:intron 30.0%
CATAGCTTATCTGTAAACAA+AGG + chr7_3:78577311-78577330 Msa1127080:CDS 30.0%
ACTATAGATTAAGGAAACCA+TGG - chr7_3:78577483-78577502 None:intergenic 30.0%
TGCAGGTTTACTATAGATTA+AGG - chr7_3:78577492-78577511 None:intergenic 30.0%
!! TTTGATTTGGAAATTTGGAC+AGG + chr7_3:78577552-78577571 Msa1127080:intron 30.0%
AAAAATGGTGTCTATAAGCT+TGG + chr7_3:78577649-78577668 Msa1127080:CDS 30.0%
ATTCTCATTAAGGATTTCCT+GGG - chr7_3:78577743-78577762 None:intergenic 30.0%
AATTCTCATTAAGGATTTCC+TGG - chr7_3:78577744-78577763 None:intergenic 30.0%
AGAAAATATCAACCTTGTCA+AGG - chr7_3:78577774-78577793 None:intergenic 30.0%
!!! CAAGGTTGATATTTTCTCTT+TGG + chr7_3:78577777-78577796 Msa1127080:CDS 30.0%
AAAAAATGACATCCTGATTC+TGG - chr7_3:78577841-78577860 None:intergenic 30.0%
! TCAATTTTTCGCTGTTCTTA+AGG - chr7_3:78578706-78578725 None:intergenic 30.0%
CCAAAAGACATTCACAAAAT+TGG - chr7_3:78578808-78578827 None:intergenic 30.0%
! CCAATTTTGTGAATGTCTTT+TGG + chr7_3:78578805-78578824 Msa1127080:three_prime_UTR 30.0%
GAGAAAAACCCCAAAATCAA+GGG + chr7_3:78574218-78574237 Msa1127080:CDS 35.0%
AGAAAAACCCCAAAATCAAG+GGG + chr7_3:78574219-78574238 Msa1127080:CDS 35.0%
! GTTATAGTCGTTGTTGGTAA+CGG - chr7_3:78574327-78574346 None:intergenic 35.0%
GAAGAAGTTATAGTCGTTGT+TGG - chr7_3:78574333-78574352 None:intergenic 35.0%
TACTCCAGATTACATAACTC+CGG + chr7_3:78574568-78574587 Msa1127080:CDS 35.0%
TTATCCGGAGTTATGTAATC+TGG - chr7_3:78574575-78574594 None:intergenic 35.0%
! TTCAAAATCCGCTGATTATC+CGG - chr7_3:78574590-78574609 None:intergenic 35.0%
!! GATAATCAGCGGATTTTGAA+CGG + chr7_3:78574590-78574609 Msa1127080:CDS 35.0%
!! GAACGGTATCGATTTCAATA+AGG + chr7_3:78574607-78574626 Msa1127080:CDS 35.0%
!! GGTATCGATTTCAATAAGGT+GGG + chr7_3:78574611-78574630 Msa1127080:intron 35.0%
!! GTATCGATTTCAATAAGGTG+GGG + chr7_3:78574612-78574631 Msa1127080:intron 35.0%
TCGTAGTATTCAATTTCTCC+GGG - chr7_3:78574761-78574780 None:intergenic 35.0%
! AAAAGCAAAAGATGTCGACT+GGG + chr7_3:78574780-78574799 Msa1127080:CDS 35.0%
TACATGTGCATACACAAACA+CGG - chr7_3:78574937-78574956 None:intergenic 35.0%
GGATTGTGAACATATGTTGA+TGG + chr7_3:78575097-78575116 Msa1127080:intron 35.0%
GCATGAAAAATGTCTACTCA+TGG + chr7_3:78575168-78575187 Msa1127080:intron 35.0%
AGTATGTGATCTATGAAGCA+CGG + chr7_3:78575261-78575280 Msa1127080:intron 35.0%
CATGTCGTATCCAATACTTA+TGG - chr7_3:78575290-78575309 None:intergenic 35.0%
GAAGCACAGATACTCAAAAA+TGG - chr7_3:78575343-78575362 None:intergenic 35.0%
AATAATCCGATGATTTCAGG+GGG - chr7_3:78575382-78575401 None:intergenic 35.0%
GAATAATCCGATGATTTCAG+GGG - chr7_3:78575383-78575402 None:intergenic 35.0%
TATCCCCATTATGCACAATT+GGG - chr7_3:78575422-78575441 None:intergenic 35.0%
ATATCCCCATTATGCACAAT+TGG - chr7_3:78575423-78575442 None:intergenic 35.0%
ACGTTGAAACTAGAAATGAC+AGG - chr7_3:78575453-78575472 None:intergenic 35.0%
CAGACACCTTTCATAAAAAG+GGG - chr7_3:78575526-78575545 None:intergenic 35.0%
CCAGACACCTTTCATAAAAA+GGG - chr7_3:78575527-78575546 None:intergenic 35.0%
TCCAGACACCTTTCATAAAA+AGG - chr7_3:78575528-78575547 None:intergenic 35.0%
AGACTAGACATGATAGGATT+AGG + chr7_3:78575680-78575699 Msa1127080:intron 35.0%
AGCACCTATAGTAGAAAAGT+TGG + chr7_3:78575732-78575751 Msa1127080:intron 35.0%
TGGTAGAAAATAGGCTTAGA+TGG + chr7_3:78575752-78575771 Msa1127080:intron 35.0%
GAAAATAGGCTTAGATGGTT+TGG + chr7_3:78575757-78575776 Msa1127080:intron 35.0%
TTGATCTACTCTTCTTACCA+CGG - chr7_3:78575809-78575828 None:intergenic 35.0%
GGTAAGAAGAGTAGATCAAA+TGG + chr7_3:78575810-78575829 Msa1127080:intron 35.0%
AAGAAGAGTAGATCAAATGG+AGG + chr7_3:78575813-78575832 Msa1127080:intron 35.0%
AGTCAAGTTAAAAGAGGTAG+AGG + chr7_3:78575838-78575857 Msa1127080:intron 35.0%
AGATTTAGAGGTCAATGAGT+TGG + chr7_3:78575897-78575916 Msa1127080:intron 35.0%
! CAATGAGTTGGATCCAAATA+TGG + chr7_3:78575909-78575928 Msa1127080:intron 35.0%
! TTGTTGTTGTTGTTGTTGTC+TGG + chr7_3:78576006-78576025 Msa1127080:intron 35.0%
CTGGACTAAACATATCTAAC+TGG + chr7_3:78576025-78576044 Msa1127080:intron 35.0%
GACTAAACATATCTAACTGG+AGG + chr7_3:78576028-78576047 Msa1127080:intron 35.0%
! CACTAATTTTTCCATGTGGT+GGG - chr7_3:78576225-78576244 None:intergenic 35.0%
ACATGCATACTTGTCATAGA+TGG + chr7_3:78576304-78576323 Msa1127080:intron 35.0%
GGAAGTAGCTGTTGATATAA+CGG + chr7_3:78576408-78576427 Msa1127080:CDS 35.0%
CAGAATATGACACATAGTTC+TGG - chr7_3:78576456-78576475 None:intergenic 35.0%
AAATAGGGGTTACTAAAGCA+AGG - chr7_3:78576511-78576530 None:intergenic 35.0%
TGGGAAAGGTCCTTTAAATA+GGG - chr7_3:78576526-78576545 None:intergenic 35.0%
TTGGGAAAGGTCCTTTAAAT+AGG - chr7_3:78576527-78576546 None:intergenic 35.0%
TTTAAAGGACCTTTCCCAAA+AGG + chr7_3:78576528-78576547 Msa1127080:CDS 35.0%
!! TTGGATCTTTGGTTTGCATA+GGG - chr7_3:78576562-78576581 None:intergenic 35.0%
!! TTTGGATCTTTGGTTTGCAT+AGG - chr7_3:78576563-78576582 None:intergenic 35.0%
AATGAACGGGATACTTGTAA+AGG - chr7_3:78576610-78576629 None:intergenic 35.0%
ACAAGTATCCCGTTCATTAA+TGG + chr7_3:78576612-78576631 Msa1127080:intron 35.0%
! CTTTTCCACCATTAATGAAC+GGG - chr7_3:78576623-78576642 None:intergenic 35.0%
CTGTATAATGGTATGACTGT+AGG + chr7_3:78576706-78576725 Msa1127080:intron 35.0%
! TTGAGGTACCATGTTTCAAA+AGG + chr7_3:78576791-78576810 Msa1127080:intron 35.0%
CTCCTTCAATCACAGAATAT+CGG - chr7_3:78577068-78577087 None:intergenic 35.0%
! TTGAAGGAGAAAAGCTTTGA+TGG + chr7_3:78577079-78577098 Msa1127080:intron 35.0%
! TTGTGGGCTATTATACTTCA+TGG + chr7_3:78577246-78577265 Msa1127080:CDS 35.0%
TTGTCCTTCTGCTAATAACT+CGG - chr7_3:78577339-78577358 None:intergenic 35.0%
ATCTACATAACAGTCAGACA+AGG - chr7_3:78577391-78577410 None:intergenic 35.0%
!! GTCTATAAGCTTGGTGATTT+TGG + chr7_3:78577658-78577677 Msa1127080:CDS 35.0%
TTCTCATTAAGGATTTCCTG+GGG - chr7_3:78577742-78577761 None:intergenic 35.0%
GGTGGTCATAATTCTCATTA+AGG - chr7_3:78577753-78577772 None:intergenic 35.0%
AAATATCAACCTTGTCAAGG+TGG - chr7_3:78577771-78577790 None:intergenic 35.0%
! ATTCTGGCATAGGTGATTTT+CGG - chr7_3:78577825-78577844 None:intergenic 35.0%
TGAAATTGCAATGAATGACC+AGG - chr7_3:78577895-78577914 None:intergenic 35.0%
! GCAATTTCAAAACTTGCTCA+AGG + chr7_3:78577906-78577925 Msa1127080:CDS 35.0%
CGACTAATAAATCCAATGTG+TGG + chr7_3:78578002-78578021 Msa1127080:intron 35.0%
!!! TTTTGAGATGTAGTACAGCA+TGG - chr7_3:78578296-78578315 None:intergenic 35.0%
TAAACAGGTATAGCAATCCA+TGG - chr7_3:78578413-78578432 None:intergenic 35.0%
AAAGTGAAAAACAAGTGTGG+TGG - chr7_3:78578730-78578749 None:intergenic 35.0%
GGAAAAGTGAAAAACAAGTG+TGG - chr7_3:78578733-78578752 None:intergenic 35.0%
!! TTGTTTTTCACTTTTCCTGC+TGG + chr7_3:78578736-78578755 Msa1127080:three_prime_UTR 35.0%
CTACATAGATAGACAGATGA+TGG - chr7_3:78578763-78578782 None:intergenic 35.0%
TGCAAGTTCTGTATTTGCAA+TGG + chr7_3:78578863-78578882 Msa1127080:three_prime_UTR 35.0%
GTGTCTGTTGTACATTGTAA+TGG + chr7_3:78578895-78578914 Msa1127080:three_prime_UTR 35.0%
AAACAACAGGCAAACATTTC+TGG - chr7_3:78578966-78578985 None:intergenic 35.0%
!!! TTGTTTTTTCACCTCCAGTT+GGG + chr7_3:78578980-78578999 Msa1127080:three_prime_UTR 35.0%
CGAGAAAAACCCCAAAATCA+AGG + chr7_3:78574217-78574236 Msa1127080:CDS 40.0%
! TCTTCCTTCCCCTTGATTTT+GGG - chr7_3:78574230-78574249 None:intergenic 40.0%
! TTCTTCCTTCCCCTTGATTT+TGG - chr7_3:78574231-78574250 None:intergenic 40.0%
AAAATCAAGGGGAAGGAAGA+AGG + chr7_3:78574230-78574249 Msa1127080:CDS 40.0%
GATTTGTCTCTGAATCGAGA+AGG - chr7_3:78574368-78574387 None:intergenic 40.0%
! TCATTGGTAACCCTAATGGA+AGG - chr7_3:78574396-78574415 None:intergenic 40.0%
! AGCATCATTGGTAACCCTAA+TGG - chr7_3:78574400-78574419 None:intergenic 40.0%
ACATAACTCCGGATAATCAG+CGG + chr7_3:78574579-78574598 Msa1127080:CDS 40.0%
!! CGGTATCGATTTCAATAAGG+TGG + chr7_3:78574610-78574629 Msa1127080:intron 40.0%
TGTAATGTAATGTGTTCCGC+AGG + chr7_3:78574713-78574732 Msa1127080:intron 40.0%
TCAATTTCTCCGGGGATTTA+GGG - chr7_3:78574752-78574771 None:intergenic 40.0%
TTCAATTTCTCCGGGGATTT+AGG - chr7_3:78574753-78574772 None:intergenic 40.0%
CGTAGTATTCAATTTCTCCG+GGG - chr7_3:78574760-78574779 None:intergenic 40.0%
GAAAAGCAAAAGATGTCGAC+TGG + chr7_3:78574779-78574798 Msa1127080:CDS 40.0%
GGGATGTCTCATCAAGTTTA+CGG + chr7_3:78574996-78575015 Msa1127080:intron 40.0%
GGATGTCTCATCAAGTTTAC+GGG + chr7_3:78574997-78575016 Msa1127080:intron 40.0%
ACAGTCTCTTCTAAGTGGTA+GGG - chr7_3:78575201-78575220 None:intergenic 40.0%
TACAGTCTCTTCTAAGTGGT+AGG - chr7_3:78575202-78575221 None:intergenic 40.0%
TACCACTTAGAAGAGACTGT+AGG + chr7_3:78575201-78575220 Msa1127080:intron 40.0%
ACCACTTAGAAGAGACTGTA+GGG + chr7_3:78575202-78575221 Msa1127080:intron 40.0%
CGACATGTATGAGTGCATAT+CGG + chr7_3:78575303-78575322 Msa1127080:intron 40.0%
GACATGTATGAGTGCATATC+GGG + chr7_3:78575304-78575323 Msa1127080:intron 40.0%
ACTCAAAAATGGCTTCTGAG+TGG - chr7_3:78575332-78575351 None:intergenic 40.0%
ATAATCCGATGATTTCAGGG+GGG - chr7_3:78575381-78575400 None:intergenic 40.0%
ACCTCCCAATTGTGCATAAT+GGG + chr7_3:78575415-78575434 Msa1127080:intron 40.0%
! CTCTAGCCCCTTTTTATGAA+AGG + chr7_3:78575517-78575536 Msa1127080:intron 40.0%
!!! CCCTTTTTATGAAAGGTGTC+TGG + chr7_3:78575524-78575543 Msa1127080:intron 40.0%
GTGGTAAGACTAGACATGAT+AGG + chr7_3:78575674-78575693 Msa1127080:intron 40.0%
TGACATCATTAGAGAGAGAG+TGG + chr7_3:78575705-78575724 Msa1127080:intron 40.0%
GACATCATTAGAGAGAGAGT+GGG + chr7_3:78575706-78575725 Msa1127080:intron 40.0%
ACATCATTAGAGAGAGAGTG+GGG + chr7_3:78575707-78575726 Msa1127080:intron 40.0%
GAGGAGAGTCAAGTTAAAAG+AGG + chr7_3:78575832-78575851 Msa1127080:intron 40.0%
AAATGGGAGCCTATTTAGCA+TGG - chr7_3:78576202-78576221 None:intergenic 40.0%
!! TTTTCCATGTGGTGGGAAAT+GGG - chr7_3:78576218-78576237 None:intergenic 40.0%
!! TTTTTCCATGTGGTGGGAAA+TGG - chr7_3:78576219-78576238 None:intergenic 40.0%
! GCACTAATTTTTCCATGTGG+TGG - chr7_3:78576226-78576245 None:intergenic 40.0%
! GCAGCACTAATTTTTCCATG+TGG - chr7_3:78576229-78576248 None:intergenic 40.0%
ACTTGTCATAGATGGTGTCT+CGG + chr7_3:78576312-78576331 Msa1127080:intron 40.0%
!! TTGTTGATGGTCACCAGAAA+AGG - chr7_3:78576356-78576375 None:intergenic 40.0%
!! CAAGTTCCACAACTTGTTGA+TGG - chr7_3:78576369-78576388 None:intergenic 40.0%
CATCAACAAGTTGTGGAACT+TGG + chr7_3:78576367-78576386 Msa1127080:CDS 40.0%
ACAAGTTGTGGAACTTGGTA+AGG + chr7_3:78576372-78576391 Msa1127080:CDS 40.0%
GGGAAAGGTCCTTTAAATAG+GGG - chr7_3:78576525-78576544 None:intergenic 40.0%
! ATAGGGATCTGTCTCCTTTT+GGG - chr7_3:78576545-78576564 None:intergenic 40.0%
AACCAAAGATCCAAATGTGC+AGG + chr7_3:78576568-78576587 Msa1127080:CDS 40.0%
TACCTGCACATTTGGATCTT+TGG - chr7_3:78576573-78576592 None:intergenic 40.0%
TAGAGTGATACCTGCACATT+TGG - chr7_3:78576581-78576600 None:intergenic 40.0%
AGTATCCCGTTCATTAATGG+TGG + chr7_3:78576615-78576634 Msa1127080:intron 40.0%
GGTGGAAAAGTCATTGTAAC+TGG + chr7_3:78576633-78576652 Msa1127080:intron 40.0%
!! CACTGACTTTCATGAGATTG+AGG + chr7_3:78576774-78576793 Msa1127080:CDS 40.0%
CATGAAGTTGAATGCGATGA+AGG - chr7_3:78576854-78576873 None:intergenic 40.0%
CTTCATCGCATTCAACTTCA+TGG + chr7_3:78576852-78576871 Msa1127080:intron 40.0%
TCTTATCAGCAAATTGGTCG+AGG + chr7_3:78576895-78576914 Msa1127080:intron 40.0%
CTTATCAGCAAATTGGTCGA+GGG + chr7_3:78576896-78576915 Msa1127080:intron 40.0%
AGTTACAGCTGGATACAGAA+AGG + chr7_3:78576989-78577008 Msa1127080:CDS 40.0%
! ACGGAGACTTCTTCTTTTCT+TGG + chr7_3:78577027-78577046 Msa1127080:intron 40.0%
! CGGAGACTTCTTCTTTTCTT+GGG + chr7_3:78577028-78577047 Msa1127080:intron 40.0%
!! TCACAGAATATCGGTGTTAG+TGG - chr7_3:78577059-78577078 None:intergenic 40.0%
CACCGATATTCTGTGATTGA+AGG + chr7_3:78577063-78577082 Msa1127080:intron 40.0%
! AAGGAGAAAAGCTTTGATGG+AGG + chr7_3:78577082-78577101 Msa1127080:intron 40.0%
GTTCTCATGGTAACCTATAG+AGG - chr7_3:78577225-78577244 None:intergenic 40.0%
AGGTTACCATGAGAACATTG+TGG + chr7_3:78577229-78577248 Msa1127080:intron 40.0%
GGTTACCATGAGAACATTGT+GGG + chr7_3:78577230-78577249 Msa1127080:intron 40.0%
AATAGCCCACAATGTTCTCA+TGG - chr7_3:78577238-78577257 None:intergenic 40.0%
CGAACAACTGTACATTCAGA+TGG + chr7_3:78577277-78577296 Msa1127080:CDS 40.0%
ACTGCGATTTATACACGACA+AGG + chr7_3:78577585-78577604 Msa1127080:CDS 40.0%
CTGCGATTTATACACGACAA+GGG + chr7_3:78577586-78577605 Msa1127080:CDS 40.0%
GAATTATGACCACCTTGACA+AGG + chr7_3:78577759-78577778 Msa1127080:CDS 40.0%
AAATCACCTATGCCAGAATC+AGG + chr7_3:78577826-78577845 Msa1127080:CDS 40.0%
CAAGTCTACAAACCACACAT+TGG - chr7_3:78578017-78578036 None:intergenic 40.0%
! TGTGTGGTTTGTAGACTTGT+AGG + chr7_3:78578018-78578037 Msa1127080:intron 40.0%
!!! ACAGCATGGTTTTTGAGATG+TGG - chr7_3:78578282-78578301 None:intergenic 40.0%
!!! CAGAATTTTCTGAAGCACCA+TGG + chr7_3:78578393-78578412 Msa1127080:intron 40.0%
! GAACGATGCTACTTACTACT+TGG - chr7_3:78578506-78578525 None:intergenic 40.0%
! TAGAGAACCCAATTTTCGAC+AGG + chr7_3:78578679-78578698 Msa1127080:CDS 40.0%
! AGAGAACCCAATTTTCGACA+GGG + chr7_3:78578680-78578699 Msa1127080:CDS 40.0%
TTAAGGCCCTGTCGAAAATT+GGG - chr7_3:78578689-78578708 None:intergenic 40.0%
GTATTTGCAATGGTCCAGTT+AGG + chr7_3:78578873-78578892 Msa1127080:three_prime_UTR 40.0%
ATGTACAACAGACACCTAAC+TGG - chr7_3:78578890-78578909 None:intergenic 40.0%
ACTGGAGGTGAAAAAACAAC+AGG - chr7_3:78578979-78578998 None:intergenic 40.0%
!!! GTTGTTTTTTCACCTCCAGT+TGG + chr7_3:78578979-78578998 Msa1127080:three_prime_UTR 40.0%
AAACCCCAAAATCAAGGGGA+AGG + chr7_3:78574223-78574242 Msa1127080:CDS 45.0%
! CTTCCTTCCCCTTGATTTTG+GGG - chr7_3:78574229-78574248 None:intergenic 45.0%
!! TGAATCGAGAAGGTTCTGGA+AGG - chr7_3:78574358-78574377 None:intergenic 45.0%
TCTCTGAATCGAGAAGGTTC+TGG - chr7_3:78574362-78574381 None:intergenic 45.0%
!! ATCAGCATCGGTAGCATCAT+TGG - chr7_3:78574412-78574431 None:intergenic 45.0%
!! ACCGATGCTGATTCAAGAGA+TGG + chr7_3:78574420-78574439 Msa1127080:CDS 45.0%
GCCATCTCTTGAATCAGCAT+CGG - chr7_3:78574424-78574443 None:intergenic 45.0%
ACCCTACAGTCTCTTCTAAG+TGG - chr7_3:78575206-78575225 None:intergenic 45.0%
AGCACGGACACCATAAGTAT+TGG + chr7_3:78575277-78575296 Msa1127080:intron 45.0%
TAATCCGATGATTTCAGGGG+GGG - chr7_3:78575380-78575399 None:intergenic 45.0%
GACCTCCCAATTGTGCATAA+TGG + chr7_3:78575414-78575433 Msa1127080:intron 45.0%
CCTCCCAATTGTGCATAATG+GGG + chr7_3:78575416-78575435 Msa1127080:intron 45.0%
ACCGGCAATGTTGTATGGTA+CGG + chr7_3:78575579-78575598 Msa1127080:intron 45.0%
TCCGTACCATACAACATTGC+CGG - chr7_3:78575583-78575602 None:intergenic 45.0%
TGTTGTATGGTACGGAGTGT+TGG + chr7_3:78575587-78575606 Msa1127080:intron 45.0%
! GTTGTATGGTACGGAGTGTT+GGG + chr7_3:78575588-78575607 Msa1127080:intron 45.0%
CGCTTACTTTACTCTCGTGT+TGG - chr7_3:78575624-78575643 None:intergenic 45.0%
CGAGAGTAAAGTAAGCGTAG+CGG + chr7_3:78575627-78575646 Msa1127080:intron 45.0%
CATCATTAGAGAGAGAGTGG+GGG + chr7_3:78575708-78575727 Msa1127080:intron 45.0%
! AAGCCTTATCCCACTAAGTG+GGG - chr7_3:78575978-78575997 None:intergenic 45.0%
! CAAGCCTTATCCCACTAAGT+GGG - chr7_3:78575979-78575998 None:intergenic 45.0%
CAGAAAAGGTAGGGCTAAGA+GGG - chr7_3:78576342-78576361 None:intergenic 45.0%
GATGGTCACCAGAAAAGGTA+GGG - chr7_3:78576351-78576370 None:intergenic 45.0%
TGATGGTCACCAGAAAAGGT+AGG - chr7_3:78576352-78576371 None:intergenic 45.0%
TGGTGACCATCAACAAGTTG+TGG + chr7_3:78576360-78576379 Msa1127080:CDS 45.0%
GTTGATATAACGGTAGCTGC+TGG + chr7_3:78576418-78576437 Msa1127080:CDS 45.0%
TAGGGGTTACTAAAGCAAGG+AGG - chr7_3:78576508-78576527 None:intergenic 45.0%
!! GATCTGTCTCCTTTTGGGAA+AGG - chr7_3:78576540-78576559 None:intergenic 45.0%
! CATAGGGATCTGTCTCCTTT+TGG - chr7_3:78576546-78576565 None:intergenic 45.0%
TTTGATGGAGGTTCAAGCTC+TGG + chr7_3:78577094-78577113 Msa1127080:CDS 45.0%
!! GGTTCAAGCATTGATGGAGT+AGG + chr7_3:78577156-78577175 Msa1127080:intron 45.0%
GGAAACCATGGCAAAAACGA+TGG - chr7_3:78577471-78577490 None:intergenic 45.0%
TGATAGTAGCCTTCCGATTG+AGG + chr7_3:78577696-78577715 Msa1127080:CDS 45.0%
TGACATCCTGATTCTGGCAT+AGG - chr7_3:78577835-78577854 None:intergenic 45.0%
ATTGCAATGAATGACCAGGC+AGG - chr7_3:78577891-78577910 None:intergenic 45.0%
! GTGGTTTGTAGACTTGTAGG+AGG + chr7_3:78578021-78578040 Msa1127080:intron 45.0%
CTTAAGGCCCTGTCGAAAAT+TGG - chr7_3:78578690-78578709 None:intergenic 45.0%
!! GATCAGTGTCGATTGTGTCA+TGG + chr7_3:78578782-78578801 Msa1127080:three_prime_UTR 45.0%
!! ATCGAGAAGGTTCTGGAAGG+CGG - chr7_3:78574355-78574374 None:intergenic 50.0%
GCATGTCGTGCGAATCAGTA+TGG + chr7_3:78575076-78575095 Msa1127080:intron 50.0%
ATCACCCCCCCTGAAATCAT+CGG + chr7_3:78575373-78575392 Msa1127080:intron 50.0%
ATGCACAATTGGGAGGTCAC+TGG - chr7_3:78575412-78575431 None:intergenic 50.0%
CCCCATTATGCACAATTGGG+AGG - chr7_3:78575419-78575438 None:intergenic 50.0%
GTCAGACCGGCAATGTTGTA+TGG + chr7_3:78575574-78575593 Msa1127080:intron 50.0%
! AAGTAAGCGTAGCGGAGATG+AGG + chr7_3:78575635-78575654 Msa1127080:intron 50.0%
AGGATGTTGCGTTGGATGAG+TGG + chr7_3:78575655-78575674 Msa1127080:intron 50.0%
TCTTCTTACCACGGCGTCTA+CGG - chr7_3:78575800-78575819 None:intergenic 50.0%
CTTATCCCACTAAGTGGGGT+CGG - chr7_3:78575974-78575993 None:intergenic 50.0%
! CCAAGCCTTATCCCACTAAG+TGG - chr7_3:78575980-78575999 None:intergenic 50.0%
CCACTTAGTGGGATAAGGCT+TGG + chr7_3:78575977-78575996 Msa1127080:intron 50.0%
CCAGAAAAGGTAGGGCTAAG+AGG - chr7_3:78576343-78576362 None:intergenic 50.0%
! CCTCTTAGCCCTACCTTTTC+TGG + chr7_3:78576340-78576359 Msa1127080:CDS 50.0%
TGGTAAGGACTCTGTTGCAG+AGG + chr7_3:78576387-78576406 Msa1127080:CDS 50.0%
!! GACACATAGTTCTGGGCCTT+CGG - chr7_3:78576448-78576467 None:intergenic 50.0%
TGCAGCTACATTGCGTTGCA+GGG + chr7_3:78576474-78576493 Msa1127080:CDS 50.0%
GGGTTACTAAAGCAAGGAGG+AGG - chr7_3:78576505-78576524 None:intergenic 50.0%
ACGCAGTACACAGTTACAGC+TGG + chr7_3:78576978-78576997 Msa1127080:CDS 50.0%
! GTTCAAGCTCTGGCAGCATT+GGG + chr7_3:78577104-78577123 Msa1127080:CDS 50.0%
GGCTCCGAGTTATTAGCAGA+AGG + chr7_3:78577332-78577351 Msa1127080:CDS 50.0%
!! GTCGTCCATCGTTTTTGCCA+TGG + chr7_3:78577463-78577482 Msa1127080:intron 50.0%
AGTAGCCTTCCGATTGAGGA+AGG + chr7_3:78577700-78577719 Msa1127080:CDS 50.0%
CATCTCCTTCCTCAATCGGA+AGG - chr7_3:78577708-78577727 None:intergenic 50.0%
CGTGCATCTCCTTCCTCAAT+CGG - chr7_3:78577712-78577731 None:intergenic 50.0%
AGATGCACGTTATATGCCCC+AGG + chr7_3:78577723-78577742 Msa1127080:CDS 50.0%
AATGAATGACCAGGCAGGAG+TGG - chr7_3:78577886-78577905 None:intergenic 50.0%
GGCTATGATCGATCCTGATC+CGG + chr7_3:78578629-78578648 Msa1127080:intron 50.0%
TCGATCCTGATCCGGTTAAG+AGG + chr7_3:78578637-78578656 Msa1127080:CDS 50.0%
TCTACCAACTCTCTGGCAGA+AGG - chr7_3:78578663-78578682 None:intergenic 50.0%
TGGGTTCTCTACCAACTCTC+TGG - chr7_3:78578670-78578689 None:intergenic 50.0%
! TAGACAGATGATGGTCCAGC+AGG - chr7_3:78578754-78578773 None:intergenic 50.0%
CACCTGATAATTCTCGCGCA+TGG + chr7_3:78578840-78578859 Msa1127080:three_prime_UTR 50.0%
CACCATGCGCGAGAATTATC+AGG - chr7_3:78578845-78578864 None:intergenic 50.0%
GTCTTTCTCTACCCAACTGG+AGG - chr7_3:78578994-78579013 None:intergenic 50.0%
!! GGAAGGAAGAAGGCACCACT+CGG + chr7_3:78574240-78574259 Msa1127080:CDS 55.0%
! CTTGTGTTACTCGCACCGAG+TGG - chr7_3:78574258-78574277 None:intergenic 55.0%
GGGCAAGGGCTATTATCCTG+CGG - chr7_3:78574732-78574751 None:intergenic 55.0%
TAGCCCTTGCCCTAAATCCC+CGG + chr7_3:78574740-78574759 Msa1127080:CDS 55.0%
! TCTCCGGGGATTTAGGGCAA+GGG - chr7_3:78574746-78574765 None:intergenic 55.0%
! TTCTCCGGGGATTTAGGGCA+AGG - chr7_3:78574747-78574766 None:intergenic 55.0%
CTATCGGACAGCAGTCAGAC+CGG + chr7_3:78575561-78575580 Msa1127080:intron 55.0%
!! GTATGGTACGGAGTGTTGGG+CGG + chr7_3:78575591-78575610 Msa1127080:intron 55.0%
CGGAGATGAGGATGTTGCGT+TGG + chr7_3:78575647-78575666 Msa1127080:intron 55.0%
CTTCTTACCACGGCGTCTAC+GGG - chr7_3:78575799-78575818 None:intergenic 55.0%
ACTAAGTGGGGTCGGCTACA+TGG - chr7_3:78575966-78575985 None:intergenic 55.0%
ATGTAGCCGACCCCACTTAG+TGG + chr7_3:78575965-78575984 Msa1127080:intron 55.0%
TGTAGCCGACCCCACTTAGT+GGG + chr7_3:78575966-78575985 Msa1127080:intron 55.0%
CGACCCCACTTAGTGGGATA+AGG + chr7_3:78575972-78575991 Msa1127080:intron 55.0%
CTGCAGCTACATTGCGTTGC+AGG + chr7_3:78576473-78576492 Msa1127080:CDS 55.0%
! GGTTCAAGCTCTGGCAGCAT+TGG + chr7_3:78577103-78577122 Msa1127080:CDS 55.0%
GAAGGCCTCTTAACCGGATC+AGG - chr7_3:78578645-78578664 None:intergenic 55.0%
CTGGCAGAAGGCCTCTTAAC+CGG - chr7_3:78578651-78578670 None:intergenic 55.0%
GGCTCCCATTTCCCACCACA+TGG + chr7_3:78576211-78576230 Msa1127080:intron 60.0%
GGTAGCTGCTGGTAAGCCGA+AGG + chr7_3:78576429-78576448 Msa1127080:CDS 60.0%
GAGGCCTTCTGCCAGAGAGT+TGG + chr7_3:78578656-78578675 Msa1127080:CDS 60.0%
GAGAAGACCCGTAGACGCCG+TGG + chr7_3:78575789-78575808 Msa1127080:intron 65.0%
GGCAAGTTGCCACTCCTGCC+TGG + chr7_3:78577874-78577893 Msa1127080:CDS 65.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 78574141 78579013 78574141 ID=Msa1127080;Name=Msa1127080
chr7_3 mRNA 78574141 78579013 78574141 ID=Msa1127080-mRNA-1;Parent=Msa1127080;Name=Msa1127080-mRNA-1;_AED=0.12;_eAED=0.12;_QI=72|1|1|1|1|1|10|288|487
chr7_3 exon 78574141 78574466 78574141 ID=Msa1127080-mRNA-1:exon:21974;Parent=Msa1127080-mRNA-1
chr7_3 exon 78574568 78574628 78574568 ID=Msa1127080-mRNA-1:exon:21975;Parent=Msa1127080-mRNA-1
chr7_3 exon 78574735 78574801 78574735 ID=Msa1127080-mRNA-1:exon:21976;Parent=Msa1127080-mRNA-1
chr7_3 exon 78576323 78576589 78576323 ID=Msa1127080-mRNA-1:exon:21977;Parent=Msa1127080-mRNA-1
chr7_3 exon 78576728 78576795 78576728 ID=Msa1127080-mRNA-1:exon:21978;Parent=Msa1127080-mRNA-1
chr7_3 exon 78576904 78577010 78576904 ID=Msa1127080-mRNA-1:exon:21979;Parent=Msa1127080-mRNA-1
chr7_3 exon 78577085 78577125 78577085 ID=Msa1127080-mRNA-1:exon:21980;Parent=Msa1127080-mRNA-1
chr7_3 exon 78577231 78577379 78577231 ID=Msa1127080-mRNA-1:exon:21981;Parent=Msa1127080-mRNA-1
chr7_3 exon 78577574 78577927 78577574 ID=Msa1127080-mRNA-1:exon:21982;Parent=Msa1127080-mRNA-1
chr7_3 exon 78578630 78579013 78578630 ID=Msa1127080-mRNA-1:exon:21983;Parent=Msa1127080-mRNA-1
chr7_3 five_prime_UTR 78574141 78574212 78574141 ID=Msa1127080-mRNA-1:five_prime_utr;Parent=Msa1127080-mRNA-1
chr7_3 CDS 78574213 78574466 78574213 ID=Msa1127080-mRNA-1:cds;Parent=Msa1127080-mRNA-1
chr7_3 CDS 78574568 78574628 78574568 ID=Msa1127080-mRNA-1:cds;Parent=Msa1127080-mRNA-1
chr7_3 CDS 78574735 78574801 78574735 ID=Msa1127080-mRNA-1:cds;Parent=Msa1127080-mRNA-1
chr7_3 CDS 78576323 78576589 78576323 ID=Msa1127080-mRNA-1:cds;Parent=Msa1127080-mRNA-1
chr7_3 CDS 78576728 78576795 78576728 ID=Msa1127080-mRNA-1:cds;Parent=Msa1127080-mRNA-1
chr7_3 CDS 78576904 78577010 78576904 ID=Msa1127080-mRNA-1:cds;Parent=Msa1127080-mRNA-1
chr7_3 CDS 78577085 78577125 78577085 ID=Msa1127080-mRNA-1:cds;Parent=Msa1127080-mRNA-1
chr7_3 CDS 78577231 78577379 78577231 ID=Msa1127080-mRNA-1:cds;Parent=Msa1127080-mRNA-1
chr7_3 CDS 78577574 78577927 78577574 ID=Msa1127080-mRNA-1:cds;Parent=Msa1127080-mRNA-1
chr7_3 CDS 78578630 78578725 78578630 ID=Msa1127080-mRNA-1:cds;Parent=Msa1127080-mRNA-1
chr7_3 three_prime_UTR 78578726 78579013 78578726 ID=Msa1127080-mRNA-1:three_prime_utr;Parent=Msa1127080-mRNA-1
Gene Sequence

>Msa1127080

ATGACGAGAAAAACCCCAAAATCAAGGGGAAGGAAGAAGGCACCACTCGGTGCGAGTAACACAAGACAGTTACAGCTTCAGCTCAGCAAATTCTCTTTCAAACAATACAAACCGTTACCAACAACGACTATAACTTCTTCCGCCTTCCAGAACCTTCTCGATTCAGAGACAAATCAAAATCCTTCCATTAGGGTTACCAATGATGCTACCGATGCTGATTCAAGAGATGGCATTCTTAGTCAAGATTTCTTCTGTACTCCAGATTACATAACTCCGGATAATCAGCGGATTTTGAACGGTATCGATTTCAATAAGGATAATAGCCCTTGCCCTAAATCCCCGGAGAAATTGAATACTACGAAAAGCAAAAGATGTCGACTGGATGGTGTCTCGGCAAACCCTCTTAGCCCTACCTTTTCTGGTGACCATCAACAAGTTGTGGAACTTGGTAAGGACTCTGTTGCAGAGGAAGTAGCTGTTGATATAACGGTAGCTGCTGGTAAGCCGAAGGCCCAGAACTATGTGTCATATTCTGCAGCTACATTGCGTTGCAGGGCTATACCTCCTCCTTGCTTTAGTAACCCCTATTTAAAGGACCTTTCCCAAAAGGAGACAGATCCCTATGCAAACCAAAGATCCAAATGTGCAGGTTTCTTCCCTAAATTTACAGCTTATGATGGGCTCTCACGCTATCGCACTGACTTTCATGAGATTGAGCAAATTGGTCGAGGGTACTTTAGTTGTGTTTTTAAAGTATTAAAGCGAATAGATGGCTGCTTGTATGCTGTGAAACGCAGTACACAGTTACAGCTGGATACAGAAAGGAGAAAAGCTTTGATGGAGGTTCAAGCTCTGGCAGCATTGGGTTACCATGAGAACATTGTGGGCTATTATACTTCATGGTTTGAAAACGAACAACTGTACATTCAGATGGAGATATGTGATCATAGCTTATCTGTAAACAAAGGCTCCGAGTTATTAGCAGAAGGACAAGTGTTAGAAGTTTTATATCAAGTTGCTAATGCACTGCGATTTATACACGACAAGGGAATAGCTCATCTTGATCTTAAACCTGATAATATTTATGTAAAAAATGGTGTCTATAAGCTTGGTGATTTTGGATGTGCAACTCTTACTGATAGTAGCCTTCCGATTGAGGAAGGAGATGCACGTTATATGCCCCAGGAAATCCTTAATGAGAATTATGACCACCTTGACAAGGTTGATATTTTCTCTTTGGGAGTTTCTATTTATCAACTCATCCGAAAATCACCTATGCCAGAATCAGGATGTCATTTTTTGAATCTTAAAGAAGGCAAGTTGCCACTCCTGCCTGGTCATTCATTGCAATTTCAAAACTTGCTCAAGGCTATGATCGATCCTGATCCGGTTAAGAGGCCTTCTGCCAGAGAGTTGGTAGAGAACCCAATTTTCGACAGGGCCTTAAGAACAGCGAAAAATTGA
Protein sequence

>Msa1127080

MTRKTPKSRGRKKAPLGASNTRQLQLQLSKFSFKQYKPLPTTTITSSAFQNLLDSETNQNPSIRVTNDATDADSRDGILSQDFFCTPDYITPDNQRILNGIDFNKDNSPCPKSPEKLNTTKSKRCRLDGVSANPLSPTFSGDHQQVVELGKDSVAEEVAVDITVAAGKPKAQNYVSYSAATLRCRAIPPPCFSNPYLKDLSQKETDPYANQRSKCAGFFPKFTAYDGLSRYRTDFHEIEQIGRGYFSCVFKVLKRIDGCLYAVKRSTQLQLDTERRKALMEVQALAALGYHENIVGYYTSWFENEQLYIQMEICDHSLSVNKGSELLAEGQVLEVLYQVANALRFIHDKGIAHLDLKPDNIYVKNGVYKLGDFGCATLTDSSLPIEEGDARYMPQEILNENYDHLDKVDIFSLGVSIYQLIRKSPMPESGCHFLNLKEGKLPLLPGHSLQFQNLLKAMIDPDPVKRPSARELVENPIFDRALRTAKN*