AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1096950


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1096950 MtrunA17_Chr7g0221451 99.123 342 2 1 1 341 1 342 0.0 692
Msa1096950 MtrunA17_Chr1g0211061 67.147 347 77 9 1 341 1 316 5.38e-139 397
Msa1096950 MtrunA17_Chr8g0385751 36.232 345 155 12 36 341 43 361 7.73e-56 186
Msa1096950 MtrunA17_Chr1g0199044 29.730 148 64 5 41 148 56 203 9.79e-12 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1096950 AT2G33550.1 48.295 352 133 9 1 341 1 314 4.68e-96 288
Msa1096950 AT4G31270.1 33.913 115 70 1 39 153 17 125 8.38e-17 80.1
Msa1096950 AT2G35640.1 34.711 121 62 5 41 148 22 138 2.53e-12 67.4

Find 138 sgRNAs with CRISPR-Local

Find 316 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCTAATTTCATTCACTTTA+TGG 0.011354 7_3:+22016096 Msa1096950:exon
TGAGATGTAGAGCCCGTTTC+TGG 0.174990 7_3:-22019553 None:intergenic
ACAGTTCCATCATCGGAATT+AGG 0.177565 7_3:-22016136 None:intergenic
CCTTCACCTGTTCCTATATC+AGG 0.202031 7_3:+22016769 Msa1096950:CDS
TAAACTGTTACTGCCATTAT+AGG 0.215864 7_3:+22019919 Msa1096950:three_prime_UTR
TCCGATGATGGAACTGTTAA+TGG 0.216509 7_3:+22016142 Msa1096950:CDS
GCCATAAAGTGAATGAAATT+AGG 0.217948 7_3:-22016097 None:intergenic
TTGGACTAGGCAGGAGATTT+TGG 0.244674 7_3:+22016234 Msa1096950:CDS
GATAAAGGAGTGGGAGAGTC+AGG 0.272993 7_3:+22016438 Msa1096950:CDS
AAACCGGGTCGGAATGGGTC+TGG 0.281955 7_3:+22016295 Msa1096950:CDS
CAGTTCCATCATCGGAATTA+GGG 0.288650 7_3:-22016135 None:intergenic
TTCATATTTATGATAGTAAT+AGG 0.301580 7_3:+22016668 Msa1096950:CDS
GGCTGGTTGTTTCTCATTGT+TGG 0.301660 7_3:-22019524 None:intergenic
TTTCATTCACTTTATGGCTT+TGG 0.307015 7_3:+22016102 Msa1096950:exon
CCATAAAGTGAATGAAATTA+GGG 0.326616 7_3:-22016096 None:intergenic
GGTCGGAATGGGTCTGGGTT+TGG 0.340314 7_3:+22016301 Msa1096950:CDS
GAATGTGTCGGTGTCGGTTT+CGG 0.345627 7_3:+22016621 Msa1096950:CDS
CTCTTCATTGCCGTCTCCAT+TGG 0.349024 7_3:-22019605 None:intergenic
TTCCTTCTCCTTGGCAGCCT+CGG 0.354622 7_3:-22017519 None:intergenic
CAAAATAACCAACCTGATAT+AGG 0.358309 7_3:-22016781 None:intergenic
AAGGAGATTAATAGAGAAAA+GGG 0.361069 7_3:-22015935 None:intergenic
GGCAGCATCGGTTGTTGTTC+CGG 0.362479 7_3:+22016597 Msa1096950:CDS
TCCATCCTCGCCACCGTTCA+CGG 0.362719 7_3:-22016188 None:intergenic
TCTTTCTAAAACGCCGTTAA+CGG 0.366762 7_3:+22016015 Msa1096950:five_prime_UTR
TGTGACGGTGCCTCCGTTAA+CGG 0.374926 7_3:-22016028 None:intergenic
TTAGGACTATATACAACCTT+TGG 0.376946 7_3:+22019944 Msa1096950:three_prime_UTR
GAAGGAGATTAATAGAGAAA+AGG 0.377518 7_3:-22015936 None:intergenic
GGCTGCAGCTGTGGCAGCAT+CGG 0.381376 7_3:+22016585 Msa1096950:CDS
CATTCCGACCCGGTTTGAAC+CGG 0.381786 7_3:-22016288 None:intergenic
GAAGAAACCAACGCCCATTT+CGG 0.382737 7_3:-22016334 None:intergenic
GAGATGAAACGGAGTCGTTT+TGG 0.385379 7_3:+22016464 Msa1096950:CDS
TATAGTCCTAAGTCCTATAA+TGG 0.392928 7_3:-22019932 None:intergenic
TTGCAGTTTCATTCTGCTGC+TGG 0.394241 7_3:-22019729 None:intergenic
CCCGTTTCTGGATTCGAGGC+TGG 0.399420 7_3:-22019541 None:intergenic
GTAAGAAACACGGTGTGAAC+CGG 0.402207 7_3:+22016362 Msa1096950:CDS
TAGTCAATTAATTGATGTAT+TGG 0.403614 7_3:+22019642 Msa1096950:CDS
AACCGGGTCGGAATGGGTCT+GGG 0.403971 7_3:+22016296 Msa1096950:CDS
TTGGTTCGAGTGAACCGAAA+TGG 0.407548 7_3:+22016320 Msa1096950:CDS
CCATCATCGGAATTAGGGTT+TGG 0.414944 7_3:-22016130 None:intergenic
TGCTGAAAGCCGGTTCAAAC+CGG 0.422601 7_3:+22016279 Msa1096950:CDS
GATGCTAAGTGAACAATTAG+AGG 0.427523 7_3:+22019678 Msa1096950:CDS
CGGAGATTATAAGAAGATAA+AGG 0.430532 7_3:+22016423 Msa1096950:CDS
CTTGAGCATTTCCTTCTCCT+TGG 0.433995 7_3:-22017528 None:intergenic
CTTTATCTTCTTATAATCTC+CGG 0.440339 7_3:-22016422 None:intergenic
TAGGACTATATACAACCTTT+GGG 0.442804 7_3:+22019945 Msa1096950:three_prime_UTR
GATAAGCTTGCAAATGCTCT+TGG 0.446812 7_3:+22019772 Msa1096950:CDS
GTAGTAGTGTACATACCATT+TGG 0.449657 7_3:+22019833 Msa1096950:three_prime_UTR
GCCGTCGATGGCGGTGGCAG+CGG 0.449844 7_3:+22016564 Msa1096950:CDS
GTCGGTGTCGGTTTCGGAGA+CGG 0.458922 7_3:+22016627 Msa1096950:CDS
AGGAAAGTGAGTGGTGAGGA+TGG 0.468097 7_3:+22016688 Msa1096950:CDS
CATCTCAAGGGGAACGTAAG+AGG 0.469277 7_3:+22019569 Msa1096950:CDS
CGGTTCAAACCGGGTCGGAA+TGG 0.469834 7_3:+22016289 Msa1096950:CDS
TCGGTTTCGGAGACGGTTGG+AGG 0.471862 7_3:+22016634 Msa1096950:CDS
GGTTCAAACCGGGTCGGAAT+GGG 0.472434 7_3:+22016290 Msa1096950:CDS
GGAGACGGTTGGAGGGGATG+AGG 0.473755 7_3:+22016642 Msa1096950:CDS
GCCGCTGCCACCGCCATCGA+CGG 0.475194 7_3:-22016565 None:intergenic
CCAAACCCTAATTCCGATGA+TGG 0.478565 7_3:+22016130 Msa1096950:CDS
TGGTTCGAGTGAACCGAAAT+GGG 0.480374 7_3:+22016321 Msa1096950:CDS
AACCAACCTGATATAGGAAC+AGG 0.482028 7_3:-22016775 None:intergenic
CCACTACTGTAGACTCCAAA+TGG 0.486433 7_3:-22019848 None:intergenic
ACCAGCCTCGAATCCAGAAA+CGG 0.487810 7_3:+22019540 Msa1096950:CDS
CACCGCTTCCTACACTGAAT+CGG 0.488900 7_3:-22016388 None:intergenic
GCCGTGAACGGTGGCGAGGA+TGG 0.493423 7_3:+22016187 Msa1096950:CDS
GGTGGCAGCGGCTGCAGCTG+TGG 0.495633 7_3:+22016576 Msa1096950:CDS
CTCGCCACCGTTCACGGCGG+AGG 0.497849 7_3:-22016182 None:intergenic
TCCGGTGAATGTGTCGGTGT+CGG 0.501303 7_3:+22016615 Msa1096950:CDS
TAAGAAACACGGTGTGAACC+GGG 0.505202 7_3:+22016363 Msa1096950:CDS
GGAATGATTTGAGGAGAGAG+AGG 0.508729 7_3:+22016494 Msa1096950:CDS
GAGTCAGGTGAGAGATGAAA+CGG 0.509162 7_3:+22016453 Msa1096950:CDS
CCACTCCTCCGAGGCTGCCA+AGG 0.511072 7_3:+22017511 Msa1096950:CDS
ACCATTAACAGTTCCATCAT+CGG 0.512575 7_3:-22016143 None:intergenic
CGAGGTTGCCACGTTGGACT+AGG 0.514126 7_3:+22016221 Msa1096950:CDS
GGTTGATGAGGAATGATTTG+AGG 0.515241 7_3:+22016485 Msa1096950:CDS
CCAGCCTCGAATCCAGAAAC+GGG 0.515344 7_3:+22019541 Msa1096950:CDS
GTGTCGGTTTCGGAGACGGT+TGG 0.520719 7_3:+22016631 Msa1096950:CDS
CTCCGAGGCTGCCAAGGAGA+AGG 0.523413 7_3:+22017517 Msa1096950:CDS
CGGTTTCGGAGACGGTTGGA+GGG 0.523976 7_3:+22016635 Msa1096950:CDS
TGATTCGCCGTCGATGGCGG+TGG 0.527873 7_3:+22016558 Msa1096950:CDS
AGGAGAGAGAGGAAATTGCC+TGG 0.529803 7_3:+22016505 Msa1096950:CDS
AGAGCCCGTTTCTGGATTCG+AGG 0.531658 7_3:-22019545 None:intergenic
ACCGACACCGACACATTCAC+CGG 0.534766 7_3:-22016616 None:intergenic
GATACTTGATTCGCCGTCGA+TGG 0.535395 7_3:+22016552 Msa1096950:CDS
TTATAAGAAGATAAAGGAGT+GGG 0.535976 7_3:+22016429 Msa1096950:CDS
TTACTGCCATTATAGGACTT+AGG 0.536809 7_3:+22019926 Msa1096950:three_prime_UTR
GAGGCACCGTCACAAAATAG+TGG 0.542593 7_3:+22016037 Msa1096950:five_prime_UTR
GAAACGGGCTCTACATCTCA+AGG 0.544821 7_3:+22019556 Msa1096950:CDS
GTTGCCACGTTGGACTAGGC+AGG 0.544915 7_3:+22016225 Msa1096950:CDS
CCACCGTTCACGGCGGAGGA+CGG 0.551882 7_3:-22016178 None:intergenic
CTTCTCCTTGGCAGCCTCGG+AGG 0.552038 7_3:-22017516 None:intergenic
ATTATAAGAAGATAAAGGAG+TGG 0.554162 7_3:+22016428 Msa1096950:CDS
AAGGGGAACGTAAGAGGAAG+CGG 0.555390 7_3:+22019575 Msa1096950:CDS
CCATTTGGAGTCTACAGTAG+TGG 0.558992 7_3:+22019848 Msa1096950:three_prime_UTR
GGTTTCGGAGACGGTTGGAG+GGG 0.562864 7_3:+22016636 Msa1096950:CDS
GGAAGAGTGATGCTGAAAGC+CGG 0.563160 7_3:+22016269 Msa1096950:CDS
CCGTCCTCCGCCGTGAACGG+TGG 0.563465 7_3:+22016178 Msa1096950:CDS
AACCCAGACCCATTCCGACC+CGG 0.563556 7_3:-22016298 None:intergenic
TCCTACACTGAATCGGACCC+CGG 0.566040 7_3:-22016381 None:intergenic
GACGGTTGGAGGGGATGAGG+AGG 0.566380 7_3:+22016645 Msa1096950:CDS
AGGAAGCGGTTCGCAACCAA+TGG 0.566583 7_3:+22019589 Msa1096950:CDS
TTCTAAAACGCCGTTAACGG+AGG 0.566780 7_3:+22016018 Msa1096950:five_prime_UTR
CAACGGCGAGGTTGCCACGT+TGG 0.567709 7_3:+22016215 Msa1096950:CDS
CCACCGTCCTCCGCCGTGAA+CGG 0.574662 7_3:+22016175 Msa1096950:CDS
CAACGTGGCAACCTCGCCGT+TGG 0.578833 7_3:-22016214 None:intergenic
CGATTCAGTGTAGGAAGCGG+TGG 0.579523 7_3:+22016389 Msa1096950:CDS
GCTGAAAGCCGGTTCAAACC+GGG 0.579950 7_3:+22016280 Msa1096950:CDS
GAGTGAACCGAAATGGGCGT+TGG 0.586856 7_3:+22016327 Msa1096950:CDS
CTCCGCCGTGAACGGTGGCG+AGG 0.588326 7_3:+22016183 Msa1096950:CDS
GATGGAACTGTTAATGGTAA+CGG 0.590361 7_3:+22016148 Msa1096950:CDS
GTCCGATTCAGTGTAGGAAG+CGG 0.593847 7_3:+22016386 Msa1096950:CDS
TGATAAGCTGTAGTGCAAGA+AGG 0.594772 7_3:+22019804 Msa1096950:exon
AAGCGGTGGAGCAACCTCGC+CGG 0.597218 7_3:+22016403 Msa1096950:CDS
CAATGGAGACGGCAATGAAG+AGG 0.604269 7_3:+22019606 Msa1096950:CDS
GGAAAGTGAGTGGTGAGGAT+GGG 0.605368 7_3:+22016689 Msa1096950:CDS
TGTTGTTCCGGTGAATGTGT+CGG 0.606938 7_3:+22016609 Msa1096950:CDS
CATTTGGAGTCTACAGTAGT+GGG 0.611155 7_3:+22019849 Msa1096950:three_prime_UTR
TAATAGGAAAGTGAGTGGTG+AGG 0.611943 7_3:+22016684 Msa1096950:CDS
GGAGAGAGAGGAAATTGCCT+GGG 0.612198 7_3:+22016506 Msa1096950:CDS
ACTTGATTCGCCGTCGATGG+CGG 0.613112 7_3:+22016555 Msa1096950:CDS
CGGTTCGCAACCAATGGAGA+CGG 0.613454 7_3:+22019595 Msa1096950:CDS
CCGTTCACGGCGGAGGACGG+TGG 0.619410 7_3:-22016175 None:intergenic
AAACGGGCTCTACATCTCAA+GGG 0.623139 7_3:+22019557 Msa1096950:CDS
CAAGGAGAAGGAAATGCTCA+AGG 0.623679 7_3:+22017529 Msa1096950:CDS
CCTGATATAGGAACAGGTGA+AGG 0.639915 7_3:-22016769 None:intergenic
AACGGGCTCTACATCTCAAG+GGG 0.641332 7_3:+22019558 Msa1096950:CDS
ATAAATGCAGTAACTCCCAA+AGG 0.641377 7_3:-22019960 None:intergenic
TGGAGACGGCAATGAAGAGG+AGG 0.641529 7_3:+22019609 Msa1096950:CDS
GATAGTAATAGGAAAGTGAG+TGG 0.654357 7_3:+22016679 Msa1096950:CDS
ACCTCCTTATCAAAATACCC+AGG 0.654771 7_3:-22016523 None:intergenic
TGGCGAGGATGGAAAACCAA+CGG 0.670801 7_3:+22016198 Msa1096950:CDS
TCTTCTTATAATCTCCGGCG+AGG 0.675112 7_3:-22016417 None:intergenic
ACCGGGGTCCGATTCAGTGT+AGG 0.687179 7_3:+22016380 Msa1096950:CDS
TCTTCGTACTGTAAGAAACA+CGG 0.696059 7_3:+22016352 Msa1096950:CDS
AAGAAACACGGTGTGAACCG+GGG 0.696776 7_3:+22016364 Msa1096950:CDS
AAAGCCGGTTCAAACCGGGT+CGG 0.703772 7_3:+22016284 Msa1096950:CDS
ATCTCCTGCCTAGTCCAACG+TGG 0.717269 7_3:-22016229 None:intergenic
CAGTTTCTACCACTCCTCCG+AGG 0.732051 7_3:+22017502 Msa1096950:CDS
ATCCTCGCCACCGTTCACGG+CGG 0.733386 7_3:-22016185 None:intergenic
AGGATGGAAAACCAACGGCG+AGG 0.747104 7_3:+22016203 Msa1096950:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GTTTAATAATACTAAAAATA+AGG - chr7_3:22019904-22019923 None:intergenic 10.0%
!! AGAATGAAAAAGAAAAAAAA+GGG - chr7_3:22015998-22016017 None:intergenic 15.0%
!! AAGAATGAAAAAGAAAAAAA+AGG - chr7_3:22015999-22016018 None:intergenic 15.0%
!! TTCATATTTATGATAGTAAT+AGG + chr7_3:22016668-22016687 Msa1096950:CDS 15.0%
!!! TTTTAGATTGAAATTGTTTT+CGG + chr7_3:22016882-22016901 Msa1096950:intron 15.0%
!! ATTTAAATAATTACAGCTAT+TGG + chr7_3:22016992-22017011 Msa1096950:intron 15.0%
!! TTTAAATAATTACAGCTATT+GGG + chr7_3:22016993-22017012 Msa1096950:intron 15.0%
!! TATATAATAGTGTTAATTAC+AGG + chr7_3:22017202-22017221 Msa1096950:intron 15.0%
!! GATTTCAATCATTAAATTTA+TGG - chr7_3:22017901-22017920 None:intergenic 15.0%
!! AAATTTAATGATTGAAATCA+TGG + chr7_3:22017902-22017921 Msa1096950:intron 15.0%
!! GAATTAACAAAATTTCAAAA+TGG + chr7_3:22018876-22018895 Msa1096950:intron 15.0%
!!! TTTTTTCTTCTTAAGAATGA+AGG - chr7_3:22015957-22015976 None:intergenic 20.0%
!! ATAAGCTTATACAATCAAAA+AGG - chr7_3:22016826-22016845 None:intergenic 20.0%
!!! TTTAGATTGAAATTGTTTTC+GGG + chr7_3:22016883-22016902 Msa1096950:intron 20.0%
!! TTAAATAATTACAGCTATTG+GGG + chr7_3:22016994-22017013 Msa1096950:intron 20.0%
!!! TCATTTTTTTGAATAATCAC+AGG + chr7_3:22017085-22017104 Msa1096950:intron 20.0%
!! AATAAAAAAACAGTACAGTA+TGG - chr7_3:22017342-22017361 None:intergenic 20.0%
!!! AGTGTTTTATGTTTTAAAGT+TGG + chr7_3:22017377-22017396 Msa1096950:intron 20.0%
!!! TTTTATGTTTTAAAGTTGGA+GGG + chr7_3:22017381-22017400 Msa1096950:intron 20.0%
!!! GTTTTAATACTAGAATGATA+TGG + chr7_3:22017600-22017619 Msa1096950:intron 20.0%
!! GATAAATATATGATTTACCA+CGG - chr7_3:22018127-22018146 None:intergenic 20.0%
!! AATTTCAGAAACGAAATTAA+CGG - chr7_3:22018927-22018946 None:intergenic 20.0%
!!! ATATTATCACTTTTCATGAA+TGG + chr7_3:22019298-22019317 Msa1096950:intron 20.0%
!!! ATACATTCCTTTACTTTTAT+AGG + chr7_3:22019499-22019518 Msa1096950:intron 20.0%
!! TAGTCAATTAATTGATGTAT+TGG + chr7_3:22019642-22019661 Msa1096950:CDS 20.0%
! AAGGAGATTAATAGAGAAAA+GGG - chr7_3:22015938-22015957 None:intergenic 25.0%
! CCATAAAGTGAATGAAATTA+GGG - chr7_3:22016099-22016118 None:intergenic 25.0%
! CTTTATCTTCTTATAATCTC+CGG - chr7_3:22016425-22016444 None:intergenic 25.0%
! ATTATAAGAAGATAAAGGAG+TGG + chr7_3:22016428-22016447 Msa1096950:CDS 25.0%
! TTATAAGAAGATAAAGGAGT+GGG + chr7_3:22016429-22016448 Msa1096950:CDS 25.0%
!! TTAGATTGAAATTGTTTTCG+GGG + chr7_3:22016884-22016903 Msa1096950:intron 25.0%
! TAAATAATTACAGCTATTGG+GGG + chr7_3:22016995-22017014 Msa1096950:intron 25.0%
! TAGTGTTAATTACAGGTATT+AGG + chr7_3:22017209-22017228 Msa1096950:intron 25.0%
! AGTGTTAATTACAGGTATTA+GGG + chr7_3:22017210-22017229 Msa1096950:intron 25.0%
! TTGAAACACTGCAATTTAAT+AGG - chr7_3:22017299-22017318 None:intergenic 25.0%
!!! GTTTTATGTTTTAAAGTTGG+AGG + chr7_3:22017380-22017399 Msa1096950:intron 25.0%
! TTAATAATCAAGGACAACAA+CGG - chr7_3:22017451-22017470 None:intergenic 25.0%
! AAGGTAAATAGTGTTCTTAA+TGG + chr7_3:22017548-22017567 Msa1096950:intron 25.0%
! TCGTTCTTATGTGATATATT+TGG + chr7_3:22017649-22017668 Msa1096950:intron 25.0%
! CGTTCTTATGTGATATATTT+GGG + chr7_3:22017650-22017669 Msa1096950:intron 25.0%
!!! AAATCCAAGGTTTTAAATCT+TGG + chr7_3:22017927-22017946 Msa1096950:intron 25.0%
! CTCTCAAATCATAATAATAC+TGG - chr7_3:22018151-22018170 None:intergenic 25.0%
! TGACCTTATATTTGTTTGTT+TGG + chr7_3:22018174-22018193 Msa1096950:intron 25.0%
! TGTCCAAACAAACAAATATA+AGG - chr7_3:22018180-22018199 None:intergenic 25.0%
! TATATTTGTTTGTTTGGACA+TGG + chr7_3:22018180-22018199 Msa1096950:intron 25.0%
! TATAATAGGTACTAAGTTTG+GGG - chr7_3:22018245-22018264 None:intergenic 25.0%
! CTATAATAGGTACTAAGTTT+GGG - chr7_3:22018246-22018265 None:intergenic 25.0%
! ACTATAATAGGTACTAAGTT+TGG - chr7_3:22018247-22018266 None:intergenic 25.0%
!! AGAAGATAGCTTTCATATTT+TGG - chr7_3:22018298-22018317 None:intergenic 25.0%
! AACAGACATAAAACAAATGA+TGG - chr7_3:22018415-22018434 None:intergenic 25.0%
! AATTAACCAAAATTCATCTG+CGG - chr7_3:22018471-22018490 None:intergenic 25.0%
!! TTTTTCTGCTATTGCATTTT+TGG + chr7_3:22018531-22018550 Msa1096950:intron 25.0%
!! TTTTCTGCTATTGCATTTTT+GGG + chr7_3:22018532-22018551 Msa1096950:intron 25.0%
! ATCAAATTAACTTAGAGTTG+AGG - chr7_3:22018852-22018871 None:intergenic 25.0%
!! TCTCTAACAATAGTTTTCTT+TGG + chr7_3:22018899-22018918 Msa1096950:intron 25.0%
! TGAACTTCCTTATGAATAAA+TGG + chr7_3:22019123-22019142 Msa1096950:intron 25.0%
! AAGTTGTAAGTACTATGTAA+TGG - chr7_3:22019358-22019377 None:intergenic 25.0%
! AGTACATATAATAGGCATAA+AGG + chr7_3:22019409-22019428 Msa1096950:intron 25.0%
! ATTGATGTATTGGAGAAAAA+TGG + chr7_3:22019652-22019671 Msa1096950:CDS 25.0%
! TTGATGTATTGGAGAAAAAT+GGG + chr7_3:22019653-22019672 Msa1096950:CDS 25.0%
! TTTGACCAAAAAATAATGCA+GGG - chr7_3:22019876-22019895 None:intergenic 25.0%
! ATTTGACCAAAAAATAATGC+AGG - chr7_3:22019877-22019896 None:intergenic 25.0%
GAAGGAGATTAATAGAGAAA+AGG - chr7_3:22015939-22015958 None:intergenic 30.0%
CCCTAATTTCATTCACTTTA+TGG + chr7_3:22016096-22016115 Msa1096950:exon 30.0%
GCCATAAAGTGAATGAAATT+AGG - chr7_3:22016100-22016119 None:intergenic 30.0%
TTTCATTCACTTTATGGCTT+TGG + chr7_3:22016102-22016121 Msa1096950:exon 30.0%
!!! GAGATTTTGGTTTTGATACA+GGG + chr7_3:22016247-22016266 Msa1096950:CDS 30.0%
!!! AGATTTTGGTTTTGATACAG+GGG + chr7_3:22016248-22016267 Msa1096950:CDS 30.0%
CGGAGATTATAAGAAGATAA+AGG + chr7_3:22016423-22016442 Msa1096950:CDS 30.0%
!! GTTGTTTTCTGATTTTGAGA+AGG + chr7_3:22016711-22016730 Msa1096950:CDS 30.0%
CAAAATAACCAACCTGATAT+AGG - chr7_3:22016784-22016803 None:intergenic 30.0%
!! AGGTTGGTTATTTTGTTTCA+TGG + chr7_3:22016789-22016808 Msa1096950:intron 30.0%
GTCATGTGATTACATTCAAT+CGG + chr7_3:22016962-22016981 Msa1096950:intron 30.0%
AACACTGCAATTTAATAGGA+AGG - chr7_3:22017295-22017314 None:intergenic 30.0%
! GACAACATTGGTTAAAACTA+TGG - chr7_3:22017688-22017707 None:intergenic 30.0%
! AAAACTATTGTTATCGACTG+CGG - chr7_3:22017847-22017866 None:intergenic 30.0%
TGAAATCATGGATAAATCCA+AGG + chr7_3:22017914-22017933 Msa1096950:intron 30.0%
! AAGACCAAGATTTAAAACCT+TGG - chr7_3:22017934-22017953 None:intergenic 30.0%
TGTTGTGATTCTTAGTATTG+CGG + chr7_3:22017953-22017972 Msa1096950:intron 30.0%
CATTGCACAAAGCTATTAAT+TGG - chr7_3:22018101-22018120 None:intergenic 30.0%
! TGAAGCACTTTGACTATAAT+AGG - chr7_3:22018259-22018278 None:intergenic 30.0%
! GTAGCACAATTTACCATTTT+TGG - chr7_3:22018338-22018357 None:intergenic 30.0%
GTAGCATCGTAAACAATAAA+AGG - chr7_3:22018439-22018458 None:intergenic 30.0%
!!! GCAGATGAATTTTGGTTAAT+TGG + chr7_3:22018470-22018489 Msa1096950:intron 30.0%
! TTTGGGATTTCAATAATGCT+AGG + chr7_3:22018549-22018568 Msa1096950:intron 30.0%
! CGTGATTGTTCATTTAAGAT+TGG + chr7_3:22018648-22018667 Msa1096950:intron 30.0%
TAAAGGAGTTGAGGAATTAA+AGG - chr7_3:22018803-22018822 None:intergenic 30.0%
!! TTTCGTTTCTGAAATTGTCT+CGG + chr7_3:22018931-22018950 Msa1096950:intron 30.0%
CAATTTAACCCTAAGATTGA+AGG - chr7_3:22019036-22019055 None:intergenic 30.0%
CTTCAATCTTAGGGTTAAAT+TGG + chr7_3:22019034-22019053 Msa1096950:intron 30.0%
GTACACACCATTTATTCATA+AGG - chr7_3:22019133-22019152 None:intergenic 30.0%
ATGTATAAGTAGCACTTCTA+GGG - chr7_3:22019175-22019194 None:intergenic 30.0%
TATGTATAAGTAGCACTTCT+AGG - chr7_3:22019176-22019195 None:intergenic 30.0%
GTTGCTCATATTATTTGAGT+AGG - chr7_3:22019265-22019284 None:intergenic 30.0%
CTATGTCGAGTACATATAAT+AGG + chr7_3:22019401-22019420 Msa1096950:intron 30.0%
CATATAATAGGCATAAAGGT+AGG + chr7_3:22019413-22019432 Msa1096950:intron 30.0%
GTTGGTACCTATAAAAGTAA+AGG - chr7_3:22019509-22019528 None:intergenic 30.0%
! TCAGAACATCAATTTTCAGT+TGG + chr7_3:22019702-22019721 Msa1096950:CDS 30.0%
TAAACTGTTACTGCCATTAT+AGG + chr7_3:22019919-22019938 Msa1096950:three_prime_UTR 30.0%
TATAGTCCTAAGTCCTATAA+TGG - chr7_3:22019935-22019954 None:intergenic 30.0%
TTAGGACTATATACAACCTT+TGG + chr7_3:22019944-22019963 Msa1096950:three_prime_UTR 30.0%
TAGGACTATATACAACCTTT+GGG + chr7_3:22019945-22019964 Msa1096950:three_prime_UTR 30.0%
!! TCTTTCTAAAACGCCGTTAA+CGG + chr7_3:22016015-22016034 Msa1096950:five_prime_UTR 35.0%
ACCATTAACAGTTCCATCAT+CGG - chr7_3:22016146-22016165 None:intergenic 35.0%
GATGGAACTGTTAATGGTAA+CGG + chr7_3:22016148-22016167 Msa1096950:CDS 35.0%
!!! GGAGATTTTGGTTTTGATAC+AGG + chr7_3:22016246-22016265 Msa1096950:CDS 35.0%
TCTTCGTACTGTAAGAAACA+CGG + chr7_3:22016352-22016371 Msa1096950:CDS 35.0%
!!! ATTGCCTGGGTATTTTGATA+AGG + chr7_3:22016519-22016538 Msa1096950:CDS 35.0%
GATAGTAATAGGAAAGTGAG+TGG + chr7_3:22016679-22016698 Msa1096950:CDS 35.0%
!! TTCTGATTTTGAGAAGGATG+AGG + chr7_3:22016717-22016736 Msa1096950:CDS 35.0%
!! TTTTGAGAAGGATGAGGTTT+TGG + chr7_3:22016723-22016742 Msa1096950:CDS 35.0%
GAATGTAATCACATGACATG+TGG - chr7_3:22016959-22016978 None:intergenic 35.0%
ACATGTTTGATGTTTGACGT+CGG - chr7_3:22017045-22017064 None:intergenic 35.0%
TTGAATAATCACAGGTTTCG+AGG + chr7_3:22017093-22017112 Msa1096950:intron 35.0%
! TTCAATGTCACTAGCATTGA+TGG + chr7_3:22017314-22017333 Msa1096950:intron 35.0%
!!! TGTTTTAAAGTTGGAGGGTT+TGG + chr7_3:22017386-22017405 Msa1096950:intron 35.0%
!!! GTTTTAAAGTTGGAGGGTTT+GGG + chr7_3:22017387-22017406 Msa1096950:intron 35.0%
TGGCAGATATTTGACAACAT+TGG - chr7_3:22017700-22017719 None:intergenic 35.0%
ATGTTGTCAAATATCTGCCA+TGG + chr7_3:22017700-22017719 Msa1096950:intron 35.0%
CATCCTTCACAAATTGATCA+TGG - chr7_3:22017757-22017776 None:intergenic 35.0%
CATGATCAATTTGTGAAGGA+TGG + chr7_3:22017755-22017774 Msa1096950:intron 35.0%
TGAGTCATCATAAAACACCA+TGG - chr7_3:22017786-22017805 None:intergenic 35.0%
GACTCATAATCGCAGATTTA+TGG + chr7_3:22017800-22017819 Msa1096950:intron 35.0%
AGCACTAGTGTGTCAAAAAA+AGG - chr7_3:22018078-22018097 None:intergenic 35.0%
TCATCTTGGTCAGATGAATA+GGG - chr7_3:22018213-22018232 None:intergenic 35.0%
ATCATCTTGGTCAGATGAAT+AGG - chr7_3:22018214-22018233 None:intergenic 35.0%
!! CCATTTTTGGAGACAAAGAA+AGG - chr7_3:22018325-22018344 None:intergenic 35.0%
CCTTTCTTTGTCTCCAAAAA+TGG + chr7_3:22018322-22018341 Msa1096950:intron 35.0%
!!! AGGGTTTTAGCTTATTTGAG+AGG - chr7_3:22018368-22018387 None:intergenic 35.0%
AAAGCAAGCTGTCTCATAAA+GGG - chr7_3:22018387-22018406 None:intergenic 35.0%
! TTCTTACCGCAGATGAATTT+TGG + chr7_3:22018462-22018481 Msa1096950:intron 35.0%
TGTAGAGTAGAATAAGCAAC+TGG - chr7_3:22018508-22018527 None:intergenic 35.0%
AATAATGCTAGGACACACAT+AGG + chr7_3:22018560-22018579 Msa1096950:intron 35.0%
TTAAATGAACAATCACGCCT+TGG - chr7_3:22018645-22018664 None:intergenic 35.0%
AGTCCTGAAACTGTAAATGT+TGG + chr7_3:22018687-22018706 Msa1096950:intron 35.0%
GTCCTGAAACTGTAAATGTT+GGG + chr7_3:22018688-22018707 Msa1096950:intron 35.0%
TACCCAACATTTACAGTTTC+AGG - chr7_3:22018693-22018712 None:intergenic 35.0%
TCATGATTCAAGTCATGAGA+AGG - chr7_3:22018779-22018798 None:intergenic 35.0%
TTAAGGGATTAAAGGAGTTG+AGG - chr7_3:22018812-22018831 None:intergenic 35.0%
! GGTTTGAGTTAAGGGATTAA+AGG - chr7_3:22018820-22018839 None:intergenic 35.0%
!! GCTCAATTGGTTTGAGTTAA+GGG - chr7_3:22018828-22018847 None:intergenic 35.0%
!! AGCTCAATTGGTTTGAGTTA+AGG - chr7_3:22018829-22018848 None:intergenic 35.0%
TGTTAATCCGAGACAATTTC+AGG - chr7_3:22018975-22018994 None:intergenic 35.0%
AGCCTAAATCCTTCAATCTT+AGG + chr7_3:22019024-22019043 Msa1096950:intron 35.0%
GCCTAAATCCTTCAATCTTA+GGG + chr7_3:22019025-22019044 Msa1096950:intron 35.0%
ACCCTAAGATTGAAGGATTT+AGG - chr7_3:22019029-22019048 None:intergenic 35.0%
! TCTCCTTGTGACTTTTCTTT+AGG + chr7_3:22019224-22019243 Msa1096950:intron 35.0%
! CTCCTTGTGACTTTTCTTTA+GGG + chr7_3:22019225-22019244 Msa1096950:intron 35.0%
! TCCTTGTGACTTTTCTTTAG+GGG + chr7_3:22019226-22019245 Msa1096950:intron 35.0%
ATTTGAGTAGGCTTAGATTG+TGG - chr7_3:22019253-22019272 None:intergenic 35.0%
AGGCATAAAGGTAGGATTTA+AGG + chr7_3:22019421-22019440 Msa1096950:intron 35.0%
! AAAGGTAGGATTTAAGGTTC+TGG + chr7_3:22019427-22019446 Msa1096950:intron 35.0%
GATGCTAAGTGAACAATTAG+AGG + chr7_3:22019678-22019697 Msa1096950:CDS 35.0%
GTAGTAGTGTACATACCATT+TGG + chr7_3:22019833-22019852 Msa1096950:three_prime_UTR 35.0%
TTACTGCCATTATAGGACTT+AGG + chr7_3:22019926-22019945 Msa1096950:three_prime_UTR 35.0%
! CGTGTTCCACTATTTTGTGA+CGG - chr7_3:22016046-22016065 None:intergenic 40.0%
CAGTTCCATCATCGGAATTA+GGG - chr7_3:22016138-22016157 None:intergenic 40.0%
ACAGTTCCATCATCGGAATT+AGG - chr7_3:22016139-22016158 None:intergenic 40.0%
!! TCCGATGATGGAACTGTTAA+TGG + chr7_3:22016142-22016161 Msa1096950:CDS 40.0%
!! GGTTGATGAGGAATGATTTG+AGG + chr7_3:22016485-22016504 Msa1096950:CDS 40.0%
ACCTCCTTATCAAAATACCC+AGG - chr7_3:22016526-22016545 None:intergenic 40.0%
TAATAGGAAAGTGAGTGGTG+AGG + chr7_3:22016684-22016703 Msa1096950:CDS 40.0%
AACCAACCTGATATAGGAAC+AGG - chr7_3:22016778-22016797 None:intergenic 40.0%
! ATTAGGGTTAGTGTCGAATC+TGG + chr7_3:22017226-22017245 Msa1096950:intron 40.0%
! TTAGTGTCGAATCTGGTGTT+AGG + chr7_3:22017233-22017252 Msa1096950:intron 40.0%
TTGTCAAATATCTGCCATGG+CGG + chr7_3:22017703-22017722 Msa1096950:intron 40.0%
CTGCCATGATCAATTTGTGA+AGG + chr7_3:22017751-22017770 Msa1096950:intron 40.0%
AGATTTATGGCTTTCTGCCA+TGG + chr7_3:22017813-22017832 Msa1096950:intron 40.0%
AATCGCAGTTGAATGTGATG+TGG + chr7_3:22017978-22017997 Msa1096950:intron 40.0%
TGTTTGTTTGGACATGGCTT+AGG + chr7_3:22018186-22018205 Msa1096950:intron 40.0%
TCTGACCAAGATGATGTGAT+AGG + chr7_3:22018219-22018238 Msa1096950:intron 40.0%
GAAAGCAAGCTGTCTCATAA+AGG - chr7_3:22018388-22018407 None:intergenic 40.0%
TCGCACAAAGGTTGTAAACA+GGG - chr7_3:22018599-22018618 None:intergenic 40.0%
TTCGCACAAAGGTTGTAAAC+AGG - chr7_3:22018600-22018619 None:intergenic 40.0%
TTTACAACCTTTGTGCGAAC+AGG + chr7_3:22018601-22018620 Msa1096950:intron 40.0%
CTCTATAGGATACACATCCA+AGG + chr7_3:22018625-22018644 Msa1096950:intron 40.0%
TTAGAGTTGAGGAGCTCAAT+TGG - chr7_3:22018841-22018860 None:intergenic 40.0%
TGTGGATCCTGAAATTGTCT+CGG + chr7_3:22018965-22018984 Msa1096950:intron 40.0%
GGGAAAATATACAGCAAGTC+TGG - chr7_3:22019155-22019174 None:intergenic 40.0%
ACCCCTAAAGAAAAGTCACA+AGG - chr7_3:22019230-22019249 None:intergenic 40.0%
! CAACTTTTGACCTTCAGCTT+AGG + chr7_3:22019372-22019391 Msa1096950:intron 40.0%
ATAGTCACATCCTAAGCTGA+AGG - chr7_3:22019385-22019404 None:intergenic 40.0%
GATAAGCTTGCAAATGCTCT+TGG + chr7_3:22019772-22019791 Msa1096950:CDS 40.0%
TGATAAGCTGTAGTGCAAGA+AGG + chr7_3:22019804-22019823 Msa1096950:exon 40.0%
! CATTTGGAGTCTACAGTAGT+GGG + chr7_3:22019849-22019868 Msa1096950:three_prime_UTR 40.0%
!!! TGGGTCCCTGCATTATTTTT+TGG + chr7_3:22019868-22019887 Msa1096950:three_prime_UTR 40.0%
!! TTCTAAAACGCCGTTAACGG+AGG + chr7_3:22016018-22016037 Msa1096950:five_prime_UTR 45.0%
CCATCATCGGAATTAGGGTT+TGG - chr7_3:22016133-22016152 None:intergenic 45.0%
CCAAACCCTAATTCCGATGA+TGG + chr7_3:22016130-22016149 Msa1096950:CDS 45.0%
!! TTGGACTAGGCAGGAGATTT+TGG + chr7_3:22016234-22016253 Msa1096950:CDS 45.0%
! TTGGTTCGAGTGAACCGAAA+TGG + chr7_3:22016320-22016339 Msa1096950:CDS 45.0%
TGGTTCGAGTGAACCGAAAT+GGG + chr7_3:22016321-22016340 Msa1096950:CDS 45.0%
GAAGAAACCAACGCCCATTT+CGG - chr7_3:22016337-22016356 None:intergenic 45.0%
GTAAGAAACACGGTGTGAAC+CGG + chr7_3:22016362-22016381 Msa1096950:CDS 45.0%
TAAGAAACACGGTGTGAACC+GGG + chr7_3:22016363-22016382 Msa1096950:CDS 45.0%
TCTTCTTATAATCTCCGGCG+AGG - chr7_3:22016420-22016439 None:intergenic 45.0%
GAGTCAGGTGAGAGATGAAA+CGG + chr7_3:22016453-22016472 Msa1096950:CDS 45.0%
! GAGATGAAACGGAGTCGTTT+TGG + chr7_3:22016464-22016483 Msa1096950:CDS 45.0%
GGAATGATTTGAGGAGAGAG+AGG + chr7_3:22016494-22016513 Msa1096950:CDS 45.0%
!!! GCCTGGGTATTTTGATAAGG+AGG + chr7_3:22016522-22016541 Msa1096950:CDS 45.0%
TGTTGTTCCGGTGAATGTGT+CGG + chr7_3:22016609-22016628 Msa1096950:CDS 45.0%
!! TGAGAAGGATGAGGTTTTGG+TGG + chr7_3:22016726-22016745 Msa1096950:CDS 45.0%
CCTGATATAGGAACAGGTGA+AGG - chr7_3:22016772-22016791 None:intergenic 45.0%
CCTTCACCTGTTCCTATATC+AGG + chr7_3:22016769-22016788 Msa1096950:CDS 45.0%
CACCTGTTCCTATATCAGGT+TGG + chr7_3:22016773-22016792 Msa1096950:intron 45.0%
CTTGAGCATTTCCTTCTCCT+TGG - chr7_3:22017531-22017550 None:intergenic 45.0%
CAAGGAGAAGGAAATGCTCA+AGG + chr7_3:22017529-22017548 Msa1096950:CDS 45.0%
! CTATTGTTATCGACTGCGGA+TGG - chr7_3:22017843-22017862 None:intergenic 45.0%
! AGCTTTGTGCAATGTTACCG+TGG + chr7_3:22018107-22018126 Msa1096950:intron 45.0%
GCACAAAGGTTGTAAACAGG+GGG - chr7_3:22018597-22018616 None:intergenic 45.0%
CGCACAAAGGTTGTAAACAG+GGG - chr7_3:22018598-22018617 None:intergenic 45.0%
ATAGAGTCCTGTTCGCACAA+AGG - chr7_3:22018611-22018630 None:intergenic 45.0%
TTGTGCGAACAGGACTCTAT+AGG + chr7_3:22018611-22018630 Msa1096950:intron 45.0%
GTCTCGGAAAGACAAATGTG+TGG + chr7_3:22018947-22018966 Msa1096950:intron 45.0%
!! GGCTGGTTGTTTCTCATTGT+TGG - chr7_3:22019527-22019546 None:intergenic 45.0%
! AAACGGGCTCTACATCTCAA+GGG + chr7_3:22019557-22019576 Msa1096950:CDS 45.0%
TTGCAGTTTCATTCTGCTGC+TGG - chr7_3:22019732-22019751 None:intergenic 45.0%
CCACTACTGTAGACTCCAAA+TGG - chr7_3:22019851-22019870 None:intergenic 45.0%
! CCATTTGGAGTCTACAGTAG+TGG + chr7_3:22019848-22019867 Msa1096950:three_prime_UTR 45.0%
!! AAAATATAAATTAATAATCA+AGG - chr7_3:22017461-22017480 None:intergenic 5.0%
!!! ATATATATTTTTTTTATGTT+AGG + chr7_3:22018032-22018051 Msa1096950:intron 5.0%
!!! TATATATTTTTTTTATGTTA+GGG + chr7_3:22018033-22018052 Msa1096950:intron 5.0%
!! TTTAATAATACTAAAAATAA+GGG - chr7_3:22019903-22019922 None:intergenic 5.0%
!! GAGGCACCGTCACAAAATAG+TGG + chr7_3:22016037-22016056 Msa1096950:five_prime_UTR 50.0%
TGGCGAGGATGGAAAACCAA+CGG + chr7_3:22016198-22016217 Msa1096950:CDS 50.0%
GGAAGAGTGATGCTGAAAGC+CGG + chr7_3:22016269-22016288 Msa1096950:CDS 50.0%
! TGCTGAAAGCCGGTTCAAAC+CGG + chr7_3:22016279-22016298 Msa1096950:CDS 50.0%
AAGAAACACGGTGTGAACCG+GGG + chr7_3:22016364-22016383 Msa1096950:CDS 50.0%
GTCCGATTCAGTGTAGGAAG+CGG + chr7_3:22016386-22016405 Msa1096950:CDS 50.0%
CACCGCTTCCTACACTGAAT+CGG - chr7_3:22016391-22016410 None:intergenic 50.0%
GATAAAGGAGTGGGAGAGTC+AGG + chr7_3:22016438-22016457 Msa1096950:CDS 50.0%
!!! CGGAGTCGTTTTGGTTGATG+AGG + chr7_3:22016473-22016492 Msa1096950:CDS 50.0%
AGGAGAGAGAGGAAATTGCC+TGG + chr7_3:22016505-22016524 Msa1096950:CDS 50.0%
GGAGAGAGAGGAAATTGCCT+GGG + chr7_3:22016506-22016525 Msa1096950:CDS 50.0%
! GATACTTGATTCGCCGTCGA+TGG + chr7_3:22016552-22016571 Msa1096950:CDS 50.0%
!! GAATGTGTCGGTGTCGGTTT+CGG + chr7_3:22016621-22016640 Msa1096950:CDS 50.0%
AGGAAAGTGAGTGGTGAGGA+TGG + chr7_3:22016688-22016707 Msa1096950:CDS 50.0%
GGAAAGTGAGTGGTGAGGAT+GGG + chr7_3:22016689-22016708 Msa1096950:CDS 50.0%
TTGGAGGGTTTGGGAGACAA+TGG + chr7_3:22017396-22017415 Msa1096950:intron 50.0%
!! ATATCTGCCATGGCGGATTG+CGG + chr7_3:22017710-22017729 Msa1096950:intron 50.0%
CCTCAACTGCAATCGCATTG+CGG + chr7_3:22018001-22018020 Msa1096950:intron 50.0%
TGGGGCCTATCACATCATCT+TGG - chr7_3:22018227-22018246 None:intergenic 50.0%
ACCAGCCTCGAATCCAGAAA+CGG + chr7_3:22019540-22019559 Msa1096950:CDS 50.0%
TGAGATGTAGAGCCCGTTTC+TGG - chr7_3:22019556-22019575 None:intergenic 50.0%
! GAAACGGGCTCTACATCTCA+AGG + chr7_3:22019556-22019575 Msa1096950:CDS 50.0%
! AACGGGCTCTACATCTCAAG+GGG + chr7_3:22019558-22019577 Msa1096950:CDS 50.0%
CATCTCAAGGGGAACGTAAG+AGG + chr7_3:22019569-22019588 Msa1096950:CDS 50.0%
AAGGGGAACGTAAGAGGAAG+CGG + chr7_3:22019575-22019594 Msa1096950:CDS 50.0%
CTCTTCATTGCCGTCTCCAT+TGG - chr7_3:22019608-22019627 None:intergenic 50.0%
CAATGGAGACGGCAATGAAG+AGG + chr7_3:22019606-22019625 Msa1096950:CDS 50.0%
TGTGACGGTGCCTCCGTTAA+CGG - chr7_3:22016031-22016050 None:intergenic 55.0%
AGGATGGAAAACCAACGGCG+AGG + chr7_3:22016203-22016222 Msa1096950:CDS 55.0%
ATCTCCTGCCTAGTCCAACG+TGG - chr7_3:22016232-22016251 None:intergenic 55.0%
! GCTGAAAGCCGGTTCAAACC+GGG + chr7_3:22016280-22016299 Msa1096950:CDS 55.0%
! AAAGCCGGTTCAAACCGGGT+CGG + chr7_3:22016284-22016303 Msa1096950:CDS 55.0%
! CATTCCGACCCGGTTTGAAC+CGG - chr7_3:22016291-22016310 None:intergenic 55.0%
GGTTCAAACCGGGTCGGAAT+GGG + chr7_3:22016290-22016309 Msa1096950:CDS 55.0%
GAGTGAACCGAAATGGGCGT+TGG + chr7_3:22016327-22016346 Msa1096950:CDS 55.0%
TCCTACACTGAATCGGACCC+CGG - chr7_3:22016384-22016403 None:intergenic 55.0%
CGATTCAGTGTAGGAAGCGG+TGG + chr7_3:22016389-22016408 Msa1096950:CDS 55.0%
! ACTTGATTCGCCGTCGATGG+CGG + chr7_3:22016555-22016574 Msa1096950:CDS 55.0%
!! GGCAGCATCGGTTGTTGTTC+CGG + chr7_3:22016597-22016616 Msa1096950:CDS 55.0%
! TCCGGTGAATGTGTCGGTGT+CGG + chr7_3:22016615-22016634 Msa1096950:CDS 55.0%
ACCGACACCGACACATTCAC+CGG - chr7_3:22016619-22016638 None:intergenic 55.0%
CAGTTTCTACCACTCCTCCG+AGG + chr7_3:22017502-22017521 Msa1096950:CDS 55.0%
TTCCTTCTCCTTGGCAGCCT+CGG - chr7_3:22017522-22017541 None:intergenic 55.0%
CCGCAATGCGATTGCAGTTG+AGG - chr7_3:22018004-22018023 None:intergenic 55.0%
CCAGCCTCGAATCCAGAAAC+GGG + chr7_3:22019541-22019560 Msa1096950:CDS 55.0%
! AGAGCCCGTTTCTGGATTCG+AGG - chr7_3:22019548-22019567 None:intergenic 55.0%
AGGAAGCGGTTCGCAACCAA+TGG + chr7_3:22019589-22019608 Msa1096950:CDS 55.0%
CGGTTCGCAACCAATGGAGA+CGG + chr7_3:22019595-22019614 Msa1096950:CDS 55.0%
TGGAGACGGCAATGAAGAGG+AGG + chr7_3:22019609-22019628 Msa1096950:CDS 55.0%
TCCATCCTCGCCACCGTTCA+CGG - chr7_3:22016191-22016210 None:intergenic 60.0%
CGAGGTTGCCACGTTGGACT+AGG + chr7_3:22016221-22016240 Msa1096950:CDS 60.0%
! GTTGCCACGTTGGACTAGGC+AGG + chr7_3:22016225-22016244 Msa1096950:CDS 60.0%
CGGTTCAAACCGGGTCGGAA+TGG + chr7_3:22016289-22016308 Msa1096950:CDS 60.0%
AAACCGGGTCGGAATGGGTC+TGG + chr7_3:22016295-22016314 Msa1096950:CDS 60.0%
AACCGGGTCGGAATGGGTCT+GGG + chr7_3:22016296-22016315 Msa1096950:CDS 60.0%
AACCCAGACCCATTCCGACC+CGG - chr7_3:22016301-22016320 None:intergenic 60.0%
GGTCGGAATGGGTCTGGGTT+TGG + chr7_3:22016301-22016320 Msa1096950:CDS 60.0%
ACCGGGGTCCGATTCAGTGT+AGG + chr7_3:22016380-22016399 Msa1096950:CDS 60.0%
!! GTCGGTGTCGGTTTCGGAGA+CGG + chr7_3:22016627-22016646 Msa1096950:CDS 60.0%
!! GTGTCGGTTTCGGAGACGGT+TGG + chr7_3:22016631-22016650 Msa1096950:CDS 60.0%
TCGGTTTCGGAGACGGTTGG+AGG + chr7_3:22016634-22016653 Msa1096950:CDS 60.0%
CGGTTTCGGAGACGGTTGGA+GGG + chr7_3:22016635-22016654 Msa1096950:CDS 60.0%
GGTTTCGGAGACGGTTGGAG+GGG + chr7_3:22016636-22016655 Msa1096950:CDS 60.0%
! ACAGCTATTGGGGGCACGTG+TGG + chr7_3:22017004-22017023 Msa1096950:intron 60.0%
! CAGCTATTGGGGGCACGTGT+GGG + chr7_3:22017005-22017024 Msa1096950:intron 60.0%
TGTGAAGGATGGCAGCGCCA+TGG + chr7_3:22017766-22017785 Msa1096950:intron 60.0%
! CCCGTTTCTGGATTCGAGGC+TGG - chr7_3:22019544-22019563 None:intergenic 60.0%
ATCCTCGCCACCGTTCACGG+CGG - chr7_3:22016188-22016207 None:intergenic 65.0%
CAACGTGGCAACCTCGCCGT+TGG - chr7_3:22016217-22016236 None:intergenic 65.0%
CAACGGCGAGGTTGCCACGT+TGG + chr7_3:22016215-22016234 Msa1096950:CDS 65.0%
AAGCGGTGGAGCAACCTCGC+CGG + chr7_3:22016403-22016422 Msa1096950:CDS 65.0%
! TGATTCGCCGTCGATGGCGG+TGG + chr7_3:22016558-22016577 Msa1096950:CDS 65.0%
GGCTGCAGCTGTGGCAGCAT+CGG + chr7_3:22016585-22016604 Msa1096950:CDS 65.0%
GGAGACGGTTGGAGGGGATG+AGG + chr7_3:22016642-22016661 Msa1096950:CDS 65.0%
GACGGTTGGAGGGGATGAGG+AGG + chr7_3:22016645-22016664 Msa1096950:CDS 65.0%
CTTCTCCTTGGCAGCCTCGG+AGG - chr7_3:22017519-22017538 None:intergenic 65.0%
CTCCGAGGCTGCCAAGGAGA+AGG + chr7_3:22017517-22017536 Msa1096950:CDS 65.0%
!! TCTGCCATGGCGGATTGCGG+TGG + chr7_3:22017713-22017732 Msa1096950:intron 65.0%
!! CTGCCATGGCGGATTGCGGT+GGG + chr7_3:22017714-22017733 Msa1096950:intron 65.0%
TCTCCCACCGCAATCCGCCA+TGG - chr7_3:22017720-22017739 None:intergenic 65.0%
CGACTGCGGATGGCAGACCA+TGG - chr7_3:22017833-22017852 None:intergenic 65.0%
CCACCGTCCTCCGCCGTGAA+CGG + chr7_3:22016175-22016194 Msa1096950:CDS 70.0%
CCACCGTTCACGGCGGAGGA+CGG - chr7_3:22016181-22016200 None:intergenic 70.0%
GCCGTGAACGGTGGCGAGGA+TGG + chr7_3:22016187-22016206 Msa1096950:CDS 70.0%
CCTTGGCAGCCTCGGAGGAG+TGG - chr7_3:22017514-22017533 None:intergenic 70.0%
CCACTCCTCCGAGGCTGCCA+AGG + chr7_3:22017511-22017530 Msa1096950:CDS 70.0%
CCGTTCACGGCGGAGGACGG+TGG - chr7_3:22016178-22016197 None:intergenic 75.0%
CCGTCCTCCGCCGTGAACGG+TGG + chr7_3:22016178-22016197 Msa1096950:CDS 75.0%
CTCGCCACCGTTCACGGCGG+AGG - chr7_3:22016185-22016204 None:intergenic 75.0%
CTCCGCCGTGAACGGTGGCG+AGG + chr7_3:22016183-22016202 Msa1096950:CDS 75.0%
! GCCGTCGATGGCGGTGGCAG+CGG + chr7_3:22016564-22016583 Msa1096950:CDS 75.0%
GCCGCTGCCACCGCCATCGA+CGG - chr7_3:22016568-22016587 None:intergenic 75.0%
GGTGGCAGCGGCTGCAGCTG+TGG + chr7_3:22016576-22016595 Msa1096950:CDS 75.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 22015923 22019976 22015923 ID=Msa1096950;Name=Msa1096950
chr7_3 mRNA 22015923 22019976 22015923 ID=Msa1096950-mRNA-1;Parent=Msa1096950;Name=Msa1096950-mRNA-1;_AED=0.01;_eAED=0.01;_QI=192|1|1|1|1|1|3|160|341
chr7_3 exon 22015923 22016790 22015923 ID=Msa1096950-mRNA-1:exon:4818;Parent=Msa1096950-mRNA-1
chr7_3 exon 22017497 22017550 22017497 ID=Msa1096950-mRNA-1:exon:4819;Parent=Msa1096950-mRNA-1
chr7_3 exon 22019521 22019976 22019521 ID=Msa1096950-mRNA-1:exon:4820;Parent=Msa1096950-mRNA-1
chr7_3 five_prime_UTR 22015923 22016114 22015923 ID=Msa1096950-mRNA-1:five_prime_utr;Parent=Msa1096950-mRNA-1
chr7_3 CDS 22016115 22016790 22016115 ID=Msa1096950-mRNA-1:cds;Parent=Msa1096950-mRNA-1
chr7_3 CDS 22017497 22017550 22017497 ID=Msa1096950-mRNA-1:cds;Parent=Msa1096950-mRNA-1
chr7_3 CDS 22019521 22019816 22019521 ID=Msa1096950-mRNA-1:cds;Parent=Msa1096950-mRNA-1
chr7_3 three_prime_UTR 22019817 22019976 22019817 ID=Msa1096950-mRNA-1:three_prime_utr;Parent=Msa1096950-mRNA-1
Gene Sequence

>Msa1096950

ATGGCTTTGGAACAACCAAACCCTAATTCCGATGATGGAACTGTTAATGGTAACGGAACACCACCGTCCTCCGCCGTGAACGGTGGCGAGGATGGAAAACCAACGGCGAGGTTGCCACGTTGGACTAGGCAGGAGATTTTGGTTTTGATACAGGGGAAGAGTGATGCTGAAAGCCGGTTCAAACCGGGTCGGAATGGGTCTGGGTTTGGTTCGAGTGAACCGAAATGGGCGTTGGTTTCTTCGTACTGTAAGAAACACGGTGTGAACCGGGGTCCGATTCAGTGTAGGAAGCGGTGGAGCAACCTCGCCGGAGATTATAAGAAGATAAAGGAGTGGGAGAGTCAGGTGAGAGATGAAACGGAGTCGTTTTGGTTGATGAGGAATGATTTGAGGAGAGAGAGGAAATTGCCTGGGTATTTTGATAAGGAGGTTTATGAGATACTTGATTCGCCGTCGATGGCGGTGGCAGCGGCTGCAGCTGTGGCAGCATCGGTTGTTGTTCCGGTGAATGTGTCGGTGTCGGTTTCGGAGACGGTTGGAGGGGATGAGGAGGTTCATATTTATGATAGTAATAGGAAAGTGAGTGGTGAGGATGGGTTGTTTTCTGATTTTGAGAAGGATGAGGTTTTGGTGGCTAATAAGAATGTTCATGTTCCTTCACCTGTTCCTATATCAGAGAAGCAGTTTCTACCACTCCTCCGAGGCTGCCAAGGAGAAGGAAATGCTCAAGGTACCAACAATGAGAAACAACCAGCCTCGAATCCAGAAACGGGCTCTACATCTCAAGGGGAACGTAAGAGGAAGCGGTTCGCAACCAATGGAGACGGCAATGAAGAGGAGGAAAGTTTGCATAGTCAATTAATTGATGTATTGGAGAAAAATGGGAAGATGCTAAGTGAACAATTAGAGGCTCAGAACATCAATTTTCAGTTGGATCGCCAGCAGCAGAATGAAACTGCAAGTAGCATAGTTGCTGTGCTTGATAAGCTTGCAAATGCTCTTGGAAGAATTGCTGATAAGCTGTAG

Protein sequence

>Msa1096950

MALEQPNPNSDDGTVNGNGTPPSSAVNGGEDGKPTARLPRWTRQEILVLIQGKSDAESRFKPGRNGSGFGSSEPKWALVSSYCKKHGVNRGPIQCRKRWSNLAGDYKKIKEWESQVRDETESFWLMRNDLRRERKLPGYFDKEVYEILDSPSMAVAAAAAVAASVVVPVNVSVSVSETVGGDEEVHIYDSNRKVSGEDGLFSDFEKDEVLVANKNVHVPSPVPISEKQFLPLLRGCQGEGNAQGTNNEKQPASNPETGSTSQGERKRKRFATNGDGNEEEESLHSQLIDVLEKNGKMLSEQLEAQNINFQLDRQQQNETASSIVAVLDKLANALGRIADKL*