AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1081790


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1081790 MtrunA17_Chr7g0269001 97.755 490 8 1 1 487 1 490 0.0 998
Msa1081790 MtrunA17_Chr8g0369451 26.690 281 168 6 235 478 4 283 2.13e-21 96.7
Msa1081790 MtrunA17_Chr5g0409421 26.042 288 171 7 228 478 1 283 2.49e-21 96.3
Msa1081790 MtrunA17_Chr2g0286501 31.373 255 151 10 235 472 49 296 3.79e-20 94.4
Msa1081790 MtrunA17_Chr1g0173921 29.730 259 161 12 234 476 3 256 4.24e-20 94.0
Msa1081790 MtrunA17_Chr8g0386981 32.950 261 148 14 241 481 414 667 1.31e-19 92.4
Msa1081790 MtrunA17_Chr4g0051191 28.682 258 169 10 241 485 169 424 1.35e-19 91.3
Msa1081790 MtrunA17_Chr8g0374701 29.670 273 144 11 239 476 129 388 2.26e-19 91.3
Msa1081790 MtrunA17_Chr1g0157131 27.757 263 155 9 239 476 78 330 2.42e-19 90.9
Msa1081790 MtrunA17_Chr4g0059951 26.648 349 211 12 161 485 11 338 3.89e-19 90.5
Msa1081790 MtrunA17_Chr4g0045261 29.304 273 142 10 239 476 141 397 4.94e-19 90.1
Msa1081790 MtrunA17_Chr7g0260191 30.859 256 160 10 235 476 4 256 6.84e-19 89.7
Msa1081790 MtrunA17_Chr5g0402551 29.930 284 151 13 227 476 125 394 1.37e-18 89.0
Msa1081790 MtrunA17_Chr1g0202831 32.061 262 149 13 241 481 417 670 1.72e-18 89.0
Msa1081790 MtrunA17_Chr7g0258051 30.075 266 161 12 229 476 10 268 5.93e-18 87.0
Msa1081790 MtrunA17_Chr1g0190831 30.859 256 160 11 235 476 4 256 2.18e-17 85.1
Msa1081790 MtrunA17_Chr5g0419441 27.376 263 172 9 233 480 237 495 2.64e-17 85.1
Msa1081790 MtrunA17_Chr6g0479211 28.464 267 166 11 234 478 55 318 2.77e-17 82.8
Msa1081790 MtrunA17_Chr3g0130151 29.167 264 166 11 232 478 241 500 4.36e-17 84.3
Msa1081790 MtrunA17_Chr7g0256001 29.066 289 147 14 227 476 132 401 4.43e-17 84.0
Msa1081790 MtrunA17_Chr5g0402601 26.894 264 171 9 232 475 369 630 1.78e-16 82.4
Msa1081790 MtrunA17_Chr4g0074811 26.996 263 157 10 239 476 95 347 2.11e-16 81.6
Msa1081790 MtrunA17_Chr8g0339221 23.611 288 181 5 238 487 7 293 2.52e-16 81.3
Msa1081790 MtrunA17_Chr7g0274941 31.179 263 160 13 232 476 13 272 2.83e-16 79.3
Msa1081790 MtrunA17_Chr8g0345801 27.488 211 134 7 228 425 8 212 5.28e-16 78.2
Msa1081790 MtrunA17_Chr1g0185221 28.516 256 166 10 235 476 4 256 1.11e-15 79.7
Msa1081790 MtrunA17_Chr1g0173541 26.568 271 167 10 240 487 57 318 1.20e-15 79.3
Msa1081790 MtrunA17_Chr1g0205421 27.652 264 162 11 239 482 16 270 1.21e-15 79.0
Msa1081790 MtrunA17_Chr1g0170551 28.346 254 165 10 235 476 7 255 1.72e-15 79.7
Msa1081790 MtrunA17_Chr2g0321841 29.278 263 158 12 234 476 2 256 4.92e-15 78.2
Msa1081790 MtrunA17_Chr3g0114511 27.509 269 162 9 239 486 36 292 1.35e-14 75.9
Msa1081790 MtrunA17_Chr3g0140631 25.442 283 199 6 204 476 6 286 2.31e-14 73.9
Msa1081790 MtrunA17_Chr1g0190131 28.185 259 170 9 232 476 6 262 6.54e-14 72.0
Msa1081790 MtrunA17_Chr4g0059121 31.126 151 95 5 332 474 161 310 6.98e-14 73.2
Msa1081790 MtrunA17_Chr2g0310761 24.627 268 170 11 233 473 937 1199 1.02e-13 73.9
Msa1081790 MtrunA17_Chr8g0346081 27.106 273 176 12 230 485 11 277 1.09e-13 72.8
Msa1081790 MtrunA17_Chr3g0132591 29.344 259 156 9 234 476 111 358 1.12e-13 73.2
Msa1081790 MtrunA17_Chr2g0310781 23.881 268 170 11 234 473 844 1105 1.57e-13 73.6
Msa1081790 MtrunA17_Chr3g0133541 29.297 256 161 12 241 477 313 567 1.99e-13 72.8
Msa1081790 MtrunA17_Chr8g0357611 24.719 267 169 11 234 473 1369 1630 2.11e-13 73.2
Msa1081790 MtrunA17_Chr3g0102451 27.737 274 173 10 184 436 269 538 2.39e-13 72.4
Msa1081790 MtrunA17_Chr6g0453711 26.721 247 146 11 205 426 74 310 3.92e-13 71.6
Msa1081790 MtrunA17_Chr7g0218071 24.695 328 182 14 211 481 89 408 5.53e-13 71.2
Msa1081790 MtrunA17_Chr4g0061141 27.907 215 141 8 224 426 93 305 6.29e-13 71.2
Msa1081790 MtrunA17_Chr4g0066691 26.908 249 163 9 190 426 63 304 8.75e-13 70.5
Msa1081790 MtrunA17_Chr2g0286421 28.112 249 160 10 190 426 61 302 9.23e-13 70.5
Msa1081790 MtrunA17_Chr5g0441691 24.776 335 199 14 170 476 15 324 9.68e-13 70.5
Msa1081790 MtrunA17_Chr7g0267771 24.254 268 169 9 234 476 86 344 1.12e-12 70.1
Msa1081790 MtrunA17_Chr1g0211611 32.484 157 87 8 332 475 399 549 1.26e-12 70.1
Msa1081790 MtrunA17_Chr1g0196631 25.940 266 165 11 234 472 899 1159 1.39e-12 70.5
Msa1081790 MtrunA17_Chr8g0384001 26.481 287 162 14 220 476 16 283 1.70e-12 69.7
Msa1081790 MtrunA17_Chr3g0131861 28.169 213 138 8 226 426 88 297 1.86e-12 69.7
Msa1081790 MtrunA17_Chr2g0305141 25.275 273 166 11 233 475 1081 1345 1.93e-12 70.1
Msa1081790 MtrunA17_Chr6g0461841 25.746 268 165 11 234 473 966 1227 2.02e-12 70.1
Msa1081790 MtrunA17_Chr5g0396361 29.767 215 137 9 224 426 128 340 2.53e-12 69.3
Msa1081790 MtrunA17_Chr8g0355131 26.699 206 125 6 291 476 105 304 2.86e-12 68.9
Msa1081790 MtrunA17_Chr1g0205471 25.784 287 165 13 221 478 13 280 3.44e-12 68.9
Msa1081790 MtrunA17_Chr1g0197721 25.943 212 125 7 234 421 50 253 3.66e-12 68.6
Msa1081790 MtrunA17_Chr8g0385971 27.358 212 141 7 226 426 81 290 5.44e-12 68.2
Msa1081790 MtrunA17_Chr7g0276111 26.545 275 147 13 239 476 148 404 7.97e-12 67.8
Msa1081790 MtrunA17_Chr7g0273851 25.862 290 157 13 222 485 14 271 7.99e-12 67.8
Msa1081790 MtrunA17_Chr1g0176421 26.259 278 151 14 234 476 159 417 1.63e-11 66.6
Msa1081790 MtrunA17_Chr3g0129771 28.293 205 110 8 239 420 37 227 2.58e-11 66.2
Msa1081790 MtrunA17_Chr5g0432541 24.904 261 165 12 241 478 33 285 2.79e-11 65.9
Msa1081790 MtrunA17_Chr4g0000431 26.471 272 160 11 239 481 28 288 3.85e-11 65.5
Msa1081790 MtrunA17_Chr6g0455931 26.255 259 164 13 241 478 35 287 4.17e-11 65.5
Msa1081790 MtrunA17_Chr5g0397101 25.670 261 159 9 240 475 72 322 4.85e-11 65.1
Msa1081790 MtrunA17_Chr3g0141871 24.088 274 177 10 222 484 19 272 6.11e-11 63.9
Msa1081790 MtrunA17_Chr3g0107011 29.279 222 130 10 284 487 64 276 7.41e-11 64.3
Msa1081790 MtrunA17_Chr8g0383451 27.723 202 123 8 241 426 4 198 7.42e-11 64.3
Msa1081790 MtrunA17_Chr4g0074791 25.292 257 168 9 239 475 99 351 7.65e-11 64.3
Msa1081790 MtrunA17_Chr6g0450571 25.442 283 165 11 234 484 15 283 8.40e-11 64.3
Msa1081790 MtrunA17_Chr3g0099951 24.752 202 142 5 239 431 18 218 9.71e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1081790 AT1G02970.1 59.100 489 184 6 2 480 15 497 0.0 589
Msa1081790 AT4G19110.1 26.978 278 165 6 238 478 7 283 5.75e-23 102
Msa1081790 AT4G19110.2 26.978 278 165 6 238 478 7 283 6.16e-23 101
Msa1081790 AT5G45430.2 26.619 278 166 6 238 478 7 283 1.17e-20 95.1
Msa1081790 AT5G45430.1 26.619 278 166 6 238 478 7 283 1.24e-20 95.1
Msa1081790 AT3G20860.1 29.851 268 170 11 234 487 3 266 3.30e-20 93.2
Msa1081790 AT1G49580.1 30.961 281 148 12 239 487 154 420 9.14e-20 92.8
Msa1081790 AT3G19100.1 30.000 270 144 11 239 476 148 404 1.69e-19 92.0
Msa1081790 AT1G76040.2 29.434 265 156 11 234 476 113 368 1.96e-19 91.7
Msa1081790 AT1G76040.3 29.434 265 156 11 234 476 113 368 2.14e-19 91.3
Msa1081790 AT1G08650.1 29.278 263 167 7 239 484 19 279 1.25e-18 86.7
Msa1081790 AT3G12200.1 27.612 268 177 9 234 487 18 282 5.13e-18 87.4
Msa1081790 AT4G19110.3 28.000 225 125 5 291 478 3 227 1.06e-17 85.5
Msa1081790 AT3G63280.2 30.078 256 162 11 235 476 4 256 2.42e-17 85.1
Msa1081790 AT3G63280.3 30.078 256 162 11 235 476 4 256 2.42e-17 85.1
Msa1081790 AT3G63280.1 30.078 256 162 11 235 476 4 256 2.42e-17 85.1
Msa1081790 AT3G50530.1 29.371 286 150 13 227 476 139 408 2.45e-17 85.5
Msa1081790 AT3G63280.4 30.078 256 162 11 235 476 58 310 4.67e-17 84.3
Msa1081790 AT4G12020.3 27.675 271 162 11 225 482 1616 1865 8.48e-17 84.3
Msa1081790 AT4G12020.10 27.675 271 162 11 225 482 1608 1857 9.17e-17 84.3
Msa1081790 AT1G08650.2 29.200 250 158 7 239 471 19 266 1.52e-16 80.1
Msa1081790 AT4G13020.1 25.424 295 178 8 228 485 1 290 2.04e-16 81.6
Msa1081790 AT4G13020.6 25.424 295 178 8 228 485 1 290 2.17e-16 81.3
Msa1081790 AT4G13020.7 25.424 295 178 8 228 485 1 290 2.20e-16 81.3
Msa1081790 AT4G13020.4 25.424 295 178 8 228 485 1 290 2.30e-16 81.3
Msa1081790 AT4G08470.1 27.413 259 171 10 233 477 301 556 2.47e-16 82.0
Msa1081790 AT4G13020.2 25.424 295 178 8 228 485 9 298 3.16e-16 81.3
Msa1081790 AT4G13020.3 25.424 295 178 8 228 485 9 298 3.17e-16 81.3
Msa1081790 AT4G04700.1 26.996 263 161 10 239 476 32 288 3.45e-16 81.3
Msa1081790 AT1G18890.1 28.571 266 157 10 240 481 68 324 3.57e-16 81.6
Msa1081790 AT5G28290.1 28.405 257 169 9 235 478 4 258 3.88e-16 81.6
Msa1081790 AT5G28290.2 28.405 257 169 9 235 478 4 258 3.88e-16 81.6
Msa1081790 AT5G28290.3 28.405 257 169 9 235 478 4 258 4.34e-16 81.3
Msa1081790 AT1G69220.1 27.376 263 172 9 233 480 247 505 5.46e-16 81.6
Msa1081790 AT3G12200.2 26.619 278 177 10 234 487 18 292 5.77e-16 80.9
Msa1081790 AT3G10540.1 25.095 263 162 9 234 469 44 298 6.02e-16 80.5
Msa1081790 AT4G04710.2 25.391 256 168 7 239 476 40 290 6.16e-16 80.5
Msa1081790 AT1G50240.3 30.040 253 164 10 234 476 5 254 9.60e-16 80.9
Msa1081790 AT1G50240.2 30.040 253 164 10 234 476 5 254 9.60e-16 80.9
Msa1081790 AT4G04710.4 25.188 266 169 7 239 476 40 303 9.74e-16 80.1
Msa1081790 AT4G04710.1 25.188 266 169 7 239 476 40 303 1.05e-15 80.1
Msa1081790 AT4G21940.3 26.054 261 162 10 239 476 106 358 1.25e-15 79.7
Msa1081790 AT1G54510.4 29.545 264 166 11 238 483 7 268 1.36e-15 80.1
Msa1081790 AT1G54510.2 29.545 264 166 11 238 483 7 268 1.36e-15 80.1
Msa1081790 AT1G54510.1 29.545 264 166 11 238 483 7 268 1.36e-15 80.1
Msa1081790 AT1G54510.3 29.545 264 166 11 238 483 7 268 1.36e-15 80.1
Msa1081790 AT3G21220.2 24.345 267 178 9 233 481 68 328 1.65e-15 78.2
Msa1081790 AT3G21220.1 24.345 267 178 9 233 481 68 328 1.65e-15 78.2
Msa1081790 AT4G21940.1 26.054 261 162 10 239 476 106 358 1.70e-15 79.3
Msa1081790 AT4G29810.1 26.119 268 175 11 233 480 68 332 1.76e-15 78.2
Msa1081790 AT4G21940.2 26.054 261 162 10 239 476 106 358 1.79e-15 79.3
Msa1081790 AT4G29810.2 26.119 268 175 11 233 480 77 341 1.88e-15 78.2
Msa1081790 AT1G12680.1 28.679 265 156 11 241 484 113 365 2.22e-15 79.0
Msa1081790 AT5G12480.1 24.308 325 200 12 178 475 9 314 2.69e-15 79.0
Msa1081790 AT5G04510.2 24.715 263 163 9 234 469 43 297 3.26e-15 77.8
Msa1081790 AT5G04510.1 24.715 263 163 9 234 469 43 297 3.30e-15 78.6
Msa1081790 AT3G15220.1 26.236 263 181 7 235 486 15 275 6.49e-15 77.8
Msa1081790 AT5G66850.2 26.616 263 171 9 241 483 352 612 8.32e-15 77.4
Msa1081790 AT5G66850.1 26.616 263 171 9 241 483 352 612 9.30e-15 77.4
Msa1081790 AT1G12580.1 26.568 271 156 10 239 480 48 304 1.15e-14 76.6
Msa1081790 AT5G19450.2 26.415 265 164 9 240 481 62 318 1.40e-14 76.6
Msa1081790 AT5G19450.1 26.415 265 164 9 240 481 62 318 1.40e-14 76.6
Msa1081790 AT4G04695.1 25.843 267 159 10 239 476 32 288 1.55e-14 76.3
Msa1081790 AT4G13020.5 23.607 305 180 10 228 485 1 299 1.67e-14 75.9
Msa1081790 AT4G13020.8 23.607 305 180 10 228 485 1 299 2.16e-14 75.1
Msa1081790 AT2G45490.1 25.000 256 176 6 233 476 20 271 3.00e-14 73.6
Msa1081790 AT1G69220.2 27.626 257 167 9 239 480 226 478 3.14e-14 75.9
Msa1081790 AT1G30270.1 27.885 208 137 7 291 486 88 294 5.53e-14 74.7
Msa1081790 AT1G30270.2 27.885 208 137 7 291 486 88 294 5.83e-14 74.3
Msa1081790 AT3G49370.1 29.885 174 93 6 264 421 180 340 1.45e-13 73.6
Msa1081790 AT2G25880.1 26.070 257 172 7 233 476 23 274 1.45e-13 71.6
Msa1081790 AT1G30270.3 30.588 170 107 6 327 486 29 197 1.52e-13 72.8
Msa1081790 AT2G25880.4 26.070 257 172 7 233 476 36 287 1.72e-13 71.6
Msa1081790 AT3G57530.2 25.455 275 165 12 240 487 68 329 2.18e-13 72.4
Msa1081790 AT4G29810.3 26.054 261 170 11 233 473 77 334 2.60e-13 71.6
Msa1081790 AT1G01140.3 25.275 273 181 9 229 483 12 279 3.92e-13 71.6
Msa1081790 AT1G01140.1 25.275 273 181 9 229 483 12 279 4.27e-13 71.6
Msa1081790 AT3G57530.1 25.455 275 165 12 240 487 68 329 4.33e-13 72.0
Msa1081790 AT1G23700.2 28.889 270 164 13 234 484 15 275 4.67e-13 71.2
Msa1081790 AT5G50860.1 28.365 208 136 7 230 426 109 314 4.73e-13 72.0
Msa1081790 AT1G79570.2 25.180 278 173 13 225 473 953 1224 5.52e-13 72.0
Msa1081790 AT1G79570.1 25.180 278 173 13 225 473 953 1224 5.52e-13 72.0
Msa1081790 AT4G36070.1 28.000 200 116 6 241 421 77 267 5.60e-13 71.6
Msa1081790 AT5G50860.2 28.365 208 136 7 230 426 109 314 6.36e-13 71.2
Msa1081790 AT1G23700.1 28.889 270 164 13 234 484 15 275 6.70e-13 71.2
Msa1081790 AT1G23700.3 28.889 270 164 13 234 484 15 275 6.82e-13 71.2
Msa1081790 AT5G58350.1 27.586 261 162 14 239 478 23 277 7.30e-13 71.2
Msa1081790 AT4G36070.2 28.000 200 116 6 241 421 77 267 7.92e-13 71.2
Msa1081790 AT1G49160.2 28.155 206 111 8 239 421 32 223 9.72e-13 70.9
Msa1081790 AT1G54610.1 26.693 251 165 9 188 426 75 318 1.26e-12 70.5
Msa1081790 AT1G54610.3 26.693 251 165 9 188 426 75 318 1.26e-12 70.5
Msa1081790 AT1G54610.2 26.693 251 165 9 188 426 75 318 1.26e-12 70.5
Msa1081790 AT3G50730.1 25.856 263 170 9 232 472 33 292 1.42e-12 69.7
Msa1081790 AT2G38910.1 25.228 329 182 14 188 476 86 390 1.46e-12 70.5
Msa1081790 AT5G04510.3 25.943 212 125 7 234 421 43 246 1.69e-12 68.6
Msa1081790 AT3G23000.1 25.893 224 148 7 277 486 69 288 2.01e-12 69.3
Msa1081790 AT4G04740.4 25.620 242 149 10 258 476 92 325 2.23e-12 69.7
Msa1081790 AT4G04740.6 25.620 242 149 10 258 476 92 325 2.23e-12 69.7
Msa1081790 AT4G04740.5 25.620 242 149 10 258 476 92 325 2.23e-12 69.7
Msa1081790 AT4G04740.3 25.620 242 149 10 258 476 92 325 2.23e-12 69.7
Msa1081790 AT4G04740.1 25.620 242 149 10 258 476 92 325 2.23e-12 69.7
Msa1081790 AT4G04740.7 25.620 242 149 10 258 476 92 325 2.23e-12 69.7
Msa1081790 AT2G26980.1 26.540 211 138 6 284 480 64 271 2.48e-12 68.9
Msa1081790 AT2G26980.5 26.540 211 138 6 284 480 64 271 2.56e-12 68.9
Msa1081790 AT5G24360.1 28.044 271 140 11 257 478 480 744 2.63e-12 69.7
Msa1081790 AT1G16270.1 24.719 267 169 11 234 473 862 1123 2.74e-12 70.1
Msa1081790 AT1G16270.2 24.719 267 169 11 234 473 862 1123 2.74e-12 70.1
Msa1081790 AT1G16270.3 24.719 267 169 11 234 473 862 1123 2.74e-12 70.1
Msa1081790 AT5G24360.2 28.044 271 140 11 257 478 486 750 2.95e-12 69.7
Msa1081790 AT4G04740.2 25.620 242 149 10 258 476 92 325 3.14e-12 69.3
Msa1081790 AT5G24360.3 28.044 271 140 11 257 478 466 730 3.45e-12 69.3
Msa1081790 AT2G26980.3 26.540 211 138 6 284 480 64 271 3.86e-12 68.6
Msa1081790 AT2G26980.4 26.540 211 138 6 284 480 74 281 4.43e-12 68.6
Msa1081790 AT3G07980.2 27.068 266 170 11 239 485 24 284 4.77e-12 69.3
Msa1081790 AT3G07980.1 27.068 266 170 11 239 485 24 284 4.84e-12 69.3
Msa1081790 AT1G59580.2 24.272 309 170 12 222 476 19 317 5.44e-12 67.8
Msa1081790 AT1G59580.1 24.272 309 170 12 222 476 19 317 5.44e-12 67.8
Msa1081790 AT5G12180.1 26.692 266 154 12 239 476 77 329 6.08e-12 68.2
Msa1081790 AT2G35050.1 24.286 280 169 12 234 484 973 1238 6.25e-12 68.9
Msa1081790 AT2G35050.2 24.286 280 169 12 234 484 973 1238 6.25e-12 68.9
Msa1081790 AT4G26890.1 29.070 172 109 8 316 479 88 254 6.75e-12 67.8
Msa1081790 AT5G19360.1 25.191 262 163 10 239 476 72 324 1.02e-11 67.4
Msa1081790 AT4G10010.2 26.522 230 148 9 215 426 130 356 1.31e-11 67.4
Msa1081790 AT3G10660.2 25.180 278 169 11 228 476 175 442 1.41e-11 67.4
Msa1081790 AT3G10660.1 25.180 278 169 11 228 476 175 442 1.41e-11 67.4
Msa1081790 AT3G53930.2 24.345 267 180 8 230 478 15 277 1.56e-11 67.4
Msa1081790 AT3G45640.1 28.251 223 139 9 221 426 20 238 1.58e-11 66.2
Msa1081790 AT3G12200.4 26.570 207 137 7 294 487 12 216 1.59e-11 67.0
Msa1081790 AT5G23580.1 24.809 262 160 10 241 476 28 278 1.60e-11 67.0
Msa1081790 AT3G53930.1 24.345 267 180 8 230 478 15 277 1.69e-11 67.0
Msa1081790 AT1G04700.1 24.535 269 171 11 233 474 764 1027 1.71e-11 67.4
Msa1081790 AT1G04700.2 24.535 269 171 11 233 474 764 1027 1.71e-11 67.4
Msa1081790 AT3G22420.4 25.573 262 140 11 239 474 99 331 1.82e-11 67.0
Msa1081790 AT3G22420.3 25.573 262 140 11 239 474 99 331 2.06e-11 67.0
Msa1081790 AT3G22420.1 25.573 262 140 11 239 474 28 260 2.29e-11 66.6
Msa1081790 AT3G22420.5 25.573 262 140 11 239 474 28 260 2.57e-11 66.2
Msa1081790 AT1G53570.5 25.097 259 153 10 241 485 220 451 2.67e-11 66.2
Msa1081790 AT2G35890.2 24.138 261 165 9 240 476 137 388 2.67e-11 66.2
Msa1081790 AT2G35890.1 24.138 261 165 9 240 476 137 388 2.67e-11 66.2
Msa1081790 AT1G71530.2 27.273 209 137 8 230 426 142 347 2.81e-11 65.9
Msa1081790 AT1G71530.4 26.606 218 145 8 230 435 142 356 4.04e-11 65.1
Msa1081790 AT5G10930.1 25.581 258 160 9 241 476 18 265 4.09e-11 65.5
Msa1081790 AT1G71530.1 27.586 203 134 7 235 426 147 347 4.32e-11 65.9
Msa1081790 AT1G53050.2 27.092 251 147 11 215 448 108 339 4.38e-11 65.9
Msa1081790 AT1G53050.1 27.092 251 147 11 215 448 108 339 4.38e-11 65.9
Msa1081790 AT5G14720.1 25.000 276 169 10 234 481 15 280 4.39e-11 65.9
Msa1081790 AT5G14720.2 25.000 276 169 10 234 481 15 280 4.39e-11 65.9
Msa1081790 AT1G54960.1 27.692 260 161 10 241 477 74 329 4.49e-11 65.9
Msa1081790 AT1G54960.2 27.692 260 161 10 241 477 74 329 4.49e-11 65.9
Msa1081790 AT4G24100.2 24.911 281 171 10 227 478 25 294 4.53e-11 65.9
Msa1081790 AT4G30960.1 26.389 216 131 9 291 487 81 287 4.54e-11 65.1
Msa1081790 AT4G24100.1 24.911 281 171 10 227 478 25 294 4.59e-11 65.9
Msa1081790 AT5G39420.1 29.064 203 131 8 235 426 105 305 5.27e-11 65.5
Msa1081790 AT4G24100.3 24.911 281 171 10 227 478 41 310 5.32e-11 65.5
Msa1081790 AT4G24100.4 24.911 281 171 10 227 478 41 310 5.58e-11 65.5
Msa1081790 AT4G08470.2 31.333 150 95 5 233 376 301 448 5.94e-11 65.1
Msa1081790 AT1G71530.3 27.273 209 137 8 230 426 142 347 6.06e-11 64.7
Msa1081790 AT4G23650.1 27.203 261 157 11 240 476 83 334 6.48e-11 65.1
Msa1081790 AT1G35670.1 24.345 267 177 9 230 476 21 282 6.66e-11 65.1
Msa1081790 AT3G59790.1 28.141 199 132 7 238 426 63 260 6.76e-11 64.3
Msa1081790 AT1G48260.1 29.208 202 125 9 281 468 59 256 7.93e-11 64.3
Msa1081790 AT5G55090.1 26.012 173 117 7 316 480 89 258 8.98e-11 64.3

Find 138 sgRNAs with CRISPR-Local

Find 345 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTTCCTTCCCCTTGATTT+TGG 0.064851 7_2:+81715520 None:intergenic
GTCTATAAGCTTGGTGATTT+TGG 0.139018 7_2:-81712087 Msa1081790:CDS
CCATCATAAGCTGTAAATTT+AGG 0.139748 7_2:+81713009 None:intergenic
TTCAATTTCTCCGGGGATTT+AGG 0.142730 7_2:+81714999 None:intergenic
CTTAAGGCCCTGTCGAAAAT+TGG 0.161314 7_2:+81711071 None:intergenic
AAACAACAGGCAAACATTTC+TGG 0.179440 7_2:+81710799 None:intergenic
CATAGGGATCTGTCTCCTTT+TGG 0.182775 7_2:+81713202 None:intergenic
CTTTAGTAACCCCTATTTAA+AGG 0.192157 7_2:-81713232 Msa1081790:CDS
TTGGGAAAGGTCCTTTAAAT+AGG 0.227358 7_2:+81713221 None:intergenic
TACCTGCACATTTGGATCTT+TGG 0.232933 7_2:+81713175 None:intergenic
CTGCAGCTACATTGCGTTGC+AGG 0.263739 7_2:-81713272 Msa1081790:CDS
GGTGGTCATAATTCTCATTA+AGG 0.271396 7_2:+81711995 None:intergenic
CCAAAAGACATTCACAAAAT+TGG 0.281879 7_2:+81710957 None:intergenic
TCAATTTCTCCGGGGATTTA+GGG 0.297218 7_2:+81715000 None:intergenic
TACTTCTCTTATCAGCAAAT+TGG 0.305098 7_2:-81712856 Msa1081790:intron
TTCAAAATCCGCTGATTATC+CGG 0.313101 7_2:+81715161 None:intergenic
CAAATCAAAATCCTTCCATT+AGG 0.314586 7_2:-81715366 Msa1081790:CDS
AATTCTCATTAAGGATTTCC+TGG 0.316106 7_2:+81712004 None:intergenic
ATGGACTTAAAATATATTAA+TGG 0.316976 7_2:-81710848 Msa1081790:three_prime_UTR
TGGGAAAGGTCCTTTAAATA+GGG 0.319625 7_2:+81713222 None:intergenic
TTCTTAGTCAAGATTTCTTC+TGG 0.320527 7_2:-81715303 Msa1081790:intron
GAACGGTATCGATTTCAATA+AGG 0.332586 7_2:-81715141 Msa1081790:intron
TTGTGGGCTATTATACTTCA+TGG 0.333207 7_2:-81712499 Msa1081790:CDS
CATCATAAGCTGTAAATTTA+GGG 0.350243 7_2:+81713010 None:intergenic
TAGAGTGATACCTGCACATT+TGG 0.356447 7_2:+81713167 None:intergenic
CACCATGCGCGAGAATTATC+AGG 0.356776 7_2:+81710920 None:intergenic
CAGAATGTGACACATAGTTC+TGG 0.366945 7_2:+81713292 None:intergenic
CAAGTTCCACAACTTGTTGA+TGG 0.375134 7_2:+81713379 None:intergenic
TCTCTGAATCGAGAAGGTTC+TGG 0.376382 7_2:+81715389 None:intergenic
AAATCAAAATCCTTCCATTA+GGG 0.376468 7_2:-81715365 Msa1081790:CDS
TTGAAGGAGAAAAGCTTTGA+TGG 0.378377 7_2:-81712666 Msa1081790:intron
AAAGTATTAAAGCGAATAGA+TGG 0.379092 7_2:-81712808 Msa1081790:CDS
AACATCATTGGTAACCCTAA+TGG 0.379417 7_2:+81715351 None:intergenic
TTAGTAGTATTCAATTTCTC+CGG 0.379490 7_2:+81714990 None:intergenic
GGTTCAAGCTCTGGCAGCAT+TGG 0.388551 7_2:-81712642 Msa1081790:CDS
CCTAAATTTACAGCTTATGA+TGG 0.388769 7_2:-81713009 Msa1081790:CDS
GTTCAAGCTCTGGCAGCATT+GGG 0.395220 7_2:-81712641 Msa1081790:intron
GACACATAGTTCTGGGCCTT+CGG 0.398281 7_2:+81713300 None:intergenic
TTAAGGCCCTGTCGAAAATT+GGG 0.408531 7_2:+81711072 None:intergenic
TTATTCTTCATCTTCTTCAC+TGG 0.421992 7_2:-81715587 Msa1081790:five_prime_UTR
AAATCACCTATGCCAGAATC+AGG 0.426205 7_2:-81711919 Msa1081790:CDS
ATGTACAACAGACACCTAAC+TGG 0.427081 7_2:+81710875 None:intergenic
CTGGCAGAAGGCCTCTTAAC+CGG 0.429177 7_2:+81711110 None:intergenic
TTATCCGGAGTTATGTAATC+TGG 0.433913 7_2:+81715176 None:intergenic
TTTAAAGGACCTTTCCCAAA+AGG 0.437149 7_2:-81713217 Msa1081790:CDS
CATCAACAAGTTGTGGAACT+TGG 0.439973 7_2:-81713378 Msa1081790:CDS
GAAGGCCTCTTAACCGGATC+AGG 0.440181 7_2:+81711116 None:intergenic
GTATTTGCAATGGTCCAGTT+AGG 0.445422 7_2:-81710889 Msa1081790:three_prime_UTR
TGTGTCTTTCTCTACCCAAC+TGG 0.450537 7_2:+81710768 None:intergenic
CGTGCATCTCCTTCCTCAAT+CGG 0.457649 7_2:+81712036 None:intergenic
GAAGAAGTTATAGTCGTTGT+TGG 0.463269 7_2:+81715418 None:intergenic
GTGTCTGTTGTACATTGTAA+TGG 0.464251 7_2:-81710867 Msa1081790:three_prime_UTR
ATCAGCATCGGTAACATCAT+TGG 0.465201 7_2:+81715339 None:intergenic
TTTGATGGAGGTTCAAGCTC+TGG 0.468681 7_2:-81712651 Msa1081790:CDS
GGCAAGTTGCCACTCCTGCC+TGG 0.472331 7_2:-81711871 Msa1081790:CDS
TGATAGTAGCCTTCCGATTG+AGG 0.477068 7_2:-81712049 Msa1081790:CDS
AAAATCAAGGGGAAGGAAGA+AGG 0.477940 7_2:-81715518 Msa1081790:CDS
TTGGATCTTTGGTTTGCATA+GGG 0.480814 7_2:+81713186 None:intergenic
TAAAAGCAAAAGATGTCGAC+TGG 0.484851 7_2:-81714970 Msa1081790:CDS
GGCCATGATCGATCCTGATC+CGG 0.491918 7_2:-81711129 Msa1081790:CDS
ATTCTCATTAAGGATTTCCT+GGG 0.493473 7_2:+81712005 None:intergenic
CACTGACTTTCATGAGATTG+AGG 0.501967 7_2:-81712971 Msa1081790:intron
TTGTTGATGGTCACCAGAAA+AGG 0.502504 7_2:+81713392 None:intergenic
TCGATCCTGATCCGGTTAAG+AGG 0.503788 7_2:-81711121 Msa1081790:CDS
TTCTCCGGGGATTTAGGGCA+AGG 0.506459 7_2:+81715005 None:intergenic
TAGTAGTATTCAATTTCTCC+GGG 0.510401 7_2:+81714991 None:intergenic
AGAATGTGACACATAGTTCT+GGG 0.510819 7_2:+81713293 None:intergenic
TCTTATCAGCAAATTGGTCG+AGG 0.512410 7_2:-81712850 Msa1081790:intron
CTAAATTTACAGCTTATGAT+GGG 0.512709 7_2:-81713008 Msa1081790:CDS
ACAAGTTGTGGAACTTGGTA+AGG 0.513324 7_2:-81713373 Msa1081790:CDS
TGCAGCTACATTGCGTTGCA+GGG 0.517169 7_2:-81713271 Msa1081790:CDS
TGGGTTCTCTACCAACTCTC+TGG 0.519512 7_2:+81711091 None:intergenic
CCAGAAAAGGTAGGGCTAAG+AGG 0.520423 7_2:+81713405 None:intergenic
CAGAAAAGGTAGGGCTAAGA+GGG 0.522352 7_2:+81713406 None:intergenic
GTTATAGTCGTTGTTGGTAA+CGG 0.526884 7_2:+81715424 None:intergenic
GGAAGTAGCTGTTGATATAA+CGG 0.528442 7_2:-81713337 Msa1081790:CDS
TGACATCCTGATTCTGGCAT+AGG 0.528630 7_2:+81711913 None:intergenic
TTTGGATCTTTGGTTTGCAT+AGG 0.529211 7_2:+81713185 None:intergenic
AACCAAAGATCCAAATGTGC+AGG 0.530641 7_2:-81713177 Msa1081790:intron
GCAATTTCAAAACTTGCTCA+AGG 0.530918 7_2:-81711839 Msa1081790:intron
AACCGGATCAGGATCGATCA+TGG 0.537059 7_2:+81711127 None:intergenic
CGAACAACTGTACATTCAGA+TGG 0.538277 7_2:-81712468 Msa1081790:CDS
GAGGCCTTCTGCCAGAGAGT+TGG 0.541203 7_2:-81711102 Msa1081790:CDS
GGTTACCATGAGAACATTGT+GGG 0.544802 7_2:-81712515 Msa1081790:CDS
TGGTGACCATCAACAAGTTG+TGG 0.545627 7_2:-81713385 Msa1081790:CDS
GGGAAAGGTCCTTTAAATAG+GGG 0.547532 7_2:+81713223 None:intergenic
TGATCTACATAGACAGATGA+TGG 0.553525 7_2:+81710998 None:intergenic
ACCGATGCTGATTCAAGAGA+TGG 0.557226 7_2:-81715328 Msa1081790:CDS
GTTGATATAACGGTAGCTGC+TGG 0.559132 7_2:-81713327 Msa1081790:CDS
AAACCCCAAAATCAAGGGGA+AGG 0.559167 7_2:-81715525 Msa1081790:CDS
ACGCAGTACACAGTTACAGC+TGG 0.560665 7_2:-81712767 Msa1081790:CDS
AAATAGGGGTTACTAAAGCA+AGG 0.563788 7_2:+81713237 None:intergenic
TAGCCCTTGCCCTAAATCCC+CGG 0.565880 7_2:-81715009 Msa1081790:CDS
AATAGCCCACAATGTTCTCA+TGG 0.571060 7_2:+81712510 None:intergenic
TAGACAGATGATGGTCCAGC+AGG 0.571301 7_2:+81711007 None:intergenic
AGAAAATATCAACCTTGTCA+AGG 0.580681 7_2:+81711974 None:intergenic
TGAAATTGCAATGAATGACC+AGG 0.582007 7_2:+81711853 None:intergenic
AGTAGCCTTCCGATTGAGGA+AGG 0.582590 7_2:-81712045 Msa1081790:CDS
AATGAATGACCAGGCAGGAG+TGG 0.584677 7_2:+81711862 None:intergenic
AGATGCACGTTATATGCCCC+AGG 0.587833 7_2:-81712022 Msa1081790:CDS
GATTTGTCTCTGAATCGAGA+AGG 0.588616 7_2:+81715383 None:intergenic
CTTATCAGCAAATTGGTCGA+GGG 0.596939 7_2:-81712849 Msa1081790:intron
AGGTTACCATGAGAACATTG+TGG 0.597160 7_2:-81712516 Msa1081790:CDS
ACTTGTCATAGATGGTGTCT+CGG 0.597463 7_2:-81713433 Msa1081790:intron
GATGGTCACCAGAAAAGGTA+GGG 0.598031 7_2:+81713397 None:intergenic
TCTACCAACTCTCTGGCAGA+AGG 0.598894 7_2:+81711098 None:intergenic
TACTCCAGATTACATAACTC+CGG 0.599238 7_2:-81715180 Msa1081790:CDS
TGATGGTCACCAGAAAAGGT+AGG 0.601997 7_2:+81713396 None:intergenic
ATCGAGAAGGTTCTGGAAGG+CGG 0.606702 7_2:+81715396 None:intergenic
CACCTGATAATTCTCGCGCA+TGG 0.607613 7_2:-81710922 Msa1081790:three_prime_UTR
GCCATCTCTTGAATCAGCAT+CGG 0.608675 7_2:+81715327 None:intergenic
CATCTCCTTCCTCAATCGGA+AGG 0.611201 7_2:+81712040 None:intergenic
TCTCCGGGGATTTAGGGCAA+GGG 0.611486 7_2:+81715006 None:intergenic
GGGTTACTAAAGCAAGGAGG+AGG 0.617439 7_2:+81713243 None:intergenic
AAGGAGAAAAGCTTTGATGG+AGG 0.617943 7_2:-81712663 Msa1081790:CDS
AGTTACAGCTGGATACAGAA+AGG 0.621788 7_2:-81712756 Msa1081790:intron
TTGTCCTTCTGCTAATAACT+CGG 0.621799 7_2:+81712409 None:intergenic
CATAGCTTATCTGTAAACAA+AGG 0.622293 7_2:-81712434 Msa1081790:CDS
ATTGCAATGAATGACCAGGC+AGG 0.623023 7_2:+81711857 None:intergenic
AAATATCAACCTTGTCAAGG+TGG 0.623552 7_2:+81711977 None:intergenic
TGGTAAGGACTCTGTTGCAG+AGG 0.626891 7_2:-81713358 Msa1081790:CDS
GGCTCCGAGTTATTAGCAGA+AGG 0.627136 7_2:-81712413 Msa1081790:CDS
TGCAAGTTCTGTATTTGCAA+TGG 0.627920 7_2:-81710899 Msa1081790:three_prime_UTR
GGAAGGAAGAAGGCACCACT+CGG 0.629021 7_2:-81715508 Msa1081790:CDS
GAATTATGACCACCTTGACA+AGG 0.636957 7_2:-81711986 Msa1081790:CDS
TTCTCATTAAGGATTTCCTG+GGG 0.641683 7_2:+81712006 None:intergenic
AAAAGCAAAAGATGTCGACT+GGG 0.647827 7_2:-81714969 Msa1081790:intron
TCATTGGTAACCCTAATGGA+AGG 0.650459 7_2:+81715355 None:intergenic
GTCTTTCTCTACCCAACTGG+AGG 0.652542 7_2:+81710771 None:intergenic
TGAATCGAGAAGGTTCTGGA+AGG 0.655355 7_2:+81715393 None:intergenic
GATCAGTGTCGATTGTGTCA+TGG 0.668665 7_2:-81710980 Msa1081790:three_prime_UTR
GGTAGCTGCTGGTAAGCCGA+AGG 0.673285 7_2:-81713316 Msa1081790:CDS
ACATAACTCCGGATAATCAG+CGG 0.676793 7_2:-81715169 Msa1081790:CDS
ACTGCGATTTATACACGACA+AGG 0.681658 7_2:-81712160 Msa1081790:CDS
CTTGTGTTACTCGCACCGAG+TGG 0.719837 7_2:+81715493 None:intergenic
CTGCGATTTATACACGACAA+GGG 0.720865 7_2:-81712159 Msa1081790:CDS
AGTAGTATTCAATTTCTCCG+GGG 0.726721 7_2:+81714992 None:intergenic
TAGGGGTTACTAAAGCAAGG+AGG 0.776403 7_2:+81713240 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGTATTTATAAATAGTAAAA+TGG - chr7_2:81711585-81711604 Msa1081790:intron 10.0%
!!! TTTTTTACATAAATATTATC+AGG + chr7_2:81714270-81714289 None:intergenic 10.0%
!! GATAATATTTATGTAAAAAA+TGG - chr7_2:81714270-81714289 Msa1081790:intron 10.0%
!!! ATTTTTAAATCTTTGAATCT+TGG + chr7_2:81710828-81710847 None:intergenic 15.0%
!! ATTTACTAATTTGAAAAACT+GGG - chr7_2:81711608-81711627 Msa1081790:intron 15.0%
!! GAAAATTAACTTAAAAAACA+TGG + chr7_2:81712724-81712743 None:intergenic 15.0%
!!! ATTCATATTTTGTTTTGATT+TGG - chr7_2:81714175-81714194 Msa1081790:intron 15.0%
!! ATGGACTTAAAATATATTAA+TGG - chr7_2:81715533-81715552 Msa1081790:CDS 15.0%
!! GATTTACTAATTTGAAAAAC+TGG - chr7_2:81711607-81711626 Msa1081790:intron 20.0%
!!! AAGTTAATTTTCAACATATC+TGG - chr7_2:81712732-81712751 Msa1081790:intron 20.0%
!!! ATAAAATTCCTTTTGAAACA+TGG + chr7_2:81713438-81713457 None:intergenic 20.0%
!!! TTATGGTTTTCTCTTATTTA+AGG - chr7_2:81713771-81713790 Msa1081790:intron 20.0%
!! AATTATGTAAAAAGTTATGC+AGG + chr7_2:81714145-81714164 None:intergenic 20.0%
!!! TTTGTTTTGATTTGGAAATT+TGG - chr7_2:81714183-81714202 Msa1081790:intron 20.0%
!!! CATTTTTTGAATCTTAAAGA+AGG - chr7_2:81714489-81714508 Msa1081790:intron 20.0%
!! TATACATTGTTTAATATCGT+CGG - chr7_2:81714568-81714587 Msa1081790:intron 20.0%
!! TTAAAATATGTAAGCTACTA+TGG - chr7_2:81714757-81714776 Msa1081790:intron 20.0%
!! ATAAAATATGTAAGCTACTA+TGG - chr7_2:81714837-81714856 Msa1081790:intron 20.0%
!!! CACATTTAAAATTTGTGATT+TGG - chr7_2:81714992-81715011 Msa1081790:CDS 20.0%
!!! TGATGTTTTGATATTTATTC+AGG - chr7_2:81715231-81715250 Msa1081790:intron 20.0%
! AAATCAAAATCCTTCCATTA+GGG - chr7_2:81711016-81711035 Msa1081790:three_prime_UTR 25.0%
! TCAATTTCGGAAAATGAAAA+GGG + chr7_2:81711120-81711139 None:intergenic 25.0%
! TTAGTAGTATTCAATTTCTC+CGG + chr7_2:81711394-81711413 None:intergenic 25.0%
!! AGACATTTTTCATGCAAATT+TGG + chr7_2:81711803-81711822 None:intergenic 25.0%
! TGTCTACAAAGTCATAAATT+GGG + chr7_2:81712122-81712141 None:intergenic 25.0%
! TTGTCTACAAAGTCATAAAT+TGG + chr7_2:81712123-81712142 None:intergenic 25.0%
! TTTATGACTTTGTAGACAAT+TGG - chr7_2:81712124-81712143 Msa1081790:CDS 25.0%
! TTATGACTTTGTAGACAATT+GGG - chr7_2:81712125-81712144 Msa1081790:CDS 25.0%
!!! TAGAAAAGTTGGTAGAAAAT+AGG - chr7_2:81712379-81712398 Msa1081790:intron 25.0%
!! TTTTCTAATGGTTTCTCTAA+TGG + chr7_2:81712514-81712533 None:intergenic 25.0%
! AACCATTAGAAAAGATTTAG+AGG - chr7_2:81712521-81712540 Msa1081790:intron 25.0%
! TGTACAAACAATTAAGCTAT+AGG + chr7_2:81712696-81712715 None:intergenic 25.0%
! AACATATCTGGTTAAATTGT+AGG - chr7_2:81712744-81712763 Msa1081790:intron 25.0%
! AATGGGTAAATAAATAGCAT+TGG + chr7_2:81712909-81712928 None:intergenic 25.0%
! ACCATTATACAGTTAGAAAA+TGG + chr7_2:81713334-81713353 None:intergenic 25.0%
! CATCATAAGCTGTAAATTTA+GGG + chr7_2:81713374-81713393 None:intergenic 25.0%
! CTAAATTTACAGCTTATGAT+GGG - chr7_2:81713373-81713392 Msa1081790:CDS 25.0%
!! AAAGTATTAAAGCGAATAGA+TGG - chr7_2:81713573-81713592 Msa1081790:intron 25.0%
! ACTGTTATGTAGATTTGATT+TGG - chr7_2:81714033-81714052 Msa1081790:intron 25.0%
!!! AAGGTTGATATTTTCTCTTT+GGG - chr7_2:81714414-81714433 Msa1081790:intron 25.0%
! AATGAACTATGATTCTATTG+TGG - chr7_2:81714710-81714729 Msa1081790:intron 25.0%
! AATGAACTATGATTCTATTG+TGG - chr7_2:81714710-81714729 Msa1081790:intron 25.0%
! ATAAAACATGAGTTGTAAAC+AGG + chr7_2:81715051-81715070 None:intergenic 25.0%
TTATTCTTCATCTTCTTCAC+TGG - chr7_2:81710794-81710813 Msa1081790:three_prime_UTR 30.0%
CAAATCAAAATCCTTCCATT+AGG - chr7_2:81711015-81711034 Msa1081790:three_prime_UTR 30.0%
TTCTTAGTCAAGATTTCTTC+TGG - chr7_2:81711078-81711097 Msa1081790:CDS 30.0%
CTCAATTTCGGAAAATGAAA+AGG + chr7_2:81711121-81711140 None:intergenic 30.0%
! AAATGGAATCGACTCAATTT+CGG + chr7_2:81711133-81711152 None:intergenic 30.0%
!!! ATTGAGTCGATTCCATTTTT+TGG - chr7_2:81711135-81711154 Msa1081790:intron 30.0%
CAAACTTCGAAACCAAAAAA+TGG + chr7_2:81711150-81711169 None:intergenic 30.0%
TAGTAGTATTCAATTTCTCC+GGG + chr7_2:81711393-81711412 None:intergenic 30.0%
TTCTTCTAACTTAACGTAAC+AGG - chr7_2:81711770-81711789 Msa1081790:intron 30.0%
GAAGCATAGATACTCAAAAA+TGG + chr7_2:81711983-81712002 None:intergenic 30.0%
AGAATAATCCGATGATTTCA+GGG + chr7_2:81712024-81712043 None:intergenic 30.0%
TAGAATAATCCGATGATTTC+AGG + chr7_2:81712025-81712044 None:intergenic 30.0%
ACATTGAAACTAGAAATGAC+AGG + chr7_2:81712093-81712112 None:intergenic 30.0%
CTGGACTAAACATATGTTAT+CGG - chr7_2:81712183-81712202 Msa1081790:intron 30.0%
! TCTACCAACTTTTCTACTAT+AGG + chr7_2:81712375-81712394 None:intergenic 30.0%
! GTTTCTCTAATGGTTTTCTT+AGG + chr7_2:81712504-81712523 None:intergenic 30.0%
! GACCTCTAAATCTTTTCTAA+TGG + chr7_2:81712526-81712545 None:intergenic 30.0%
GTTCTATCAAAGACCATATT+TGG + chr7_2:81712561-81712580 None:intergenic 30.0%
TGGTCTTTGATAGAACATTA+TGG - chr7_2:81712565-81712584 Msa1081790:intron 30.0%
ACTAAACATATCTAACTGGA+GGG - chr7_2:81712665-81712684 Msa1081790:intron 30.0%
TTATACATTCCATGCTACAT+AGG - chr7_2:81712826-81712845 Msa1081790:CDS 30.0%
! GCATGTTGATTAGAGAAAAT+GGG + chr7_2:81712926-81712945 None:intergenic 30.0%
! TGCATGTTGATTAGAGAAAA+TGG + chr7_2:81712927-81712946 None:intergenic 30.0%
CTTTAGTAACCCCTATTTAA+AGG - chr7_2:81713149-81713168 Msa1081790:intron 30.0%
! ACTTTTCCACCATTAATGAA+CGG + chr7_2:81713260-81713279 None:intergenic 30.0%
!! GCCATTTTCTAACTGTATAA+TGG - chr7_2:81713330-81713349 Msa1081790:CDS 30.0%
CCATCATAAGCTGTAAATTT+AGG + chr7_2:81713375-81713394 None:intergenic 30.0%
CCTAAATTTACAGCTTATGA+TGG - chr7_2:81713372-81713391 Msa1081790:CDS 30.0%
!! TGTTGAGAACTGTTTTGAAT+TGG - chr7_2:81713459-81713478 Msa1081790:intron 30.0%
TACTTCTCTTATCAGCAAAT+TGG - chr7_2:81713525-81713544 Msa1081790:intron 30.0%
! AAGGTATCATCTTCATACTA+CGG - chr7_2:81713644-81713663 Msa1081790:intron 30.0%
!! AGCATTGGGTTTGTATTTTA+TGG - chr7_2:81713754-81713773 Msa1081790:intron 30.0%
!! ATTTAAGGTTCAAGCATTGA+TGG - chr7_2:81713786-81713805 Msa1081790:intron 30.0%
GTTTATCATCTTACCTCTAT+AGG - chr7_2:81713845-81713864 Msa1081790:intron 30.0%
CATAGCTTATCTGTAAACAA+AGG - chr7_2:81713947-81713966 Msa1081790:intron 30.0%
ACTATAGATTAAGGAAACCA+TGG + chr7_2:81714119-81714138 None:intergenic 30.0%
TGCAGGTTTACTATAGATTA+AGG + chr7_2:81714128-81714147 None:intergenic 30.0%
!! TTTGATTTGGAAATTTGGAC+AGG - chr7_2:81714188-81714207 Msa1081790:intron 30.0%
AAAAATGGTGTCTATAAGCT+TGG - chr7_2:81714285-81714304 Msa1081790:intron 30.0%
ATTCTCATTAAGGATTTCCT+GGG + chr7_2:81714379-81714398 None:intergenic 30.0%
AATTCTCATTAAGGATTTCC+TGG + chr7_2:81714380-81714399 None:intergenic 30.0%
AGAAAATATCAACCTTGTCA+AGG + chr7_2:81714410-81714429 None:intergenic 30.0%
!!! CAAGGTTGATATTTTCTCTT+TGG - chr7_2:81714413-81714432 Msa1081790:intron 30.0%
AAAAAATGACATCCTGATTC+TGG + chr7_2:81714477-81714496 None:intergenic 30.0%
! TCAATTTTTCGCTGTTCTTA+AGG + chr7_2:81715329-81715348 None:intergenic 30.0%
CCAAAAGACATTCACAAAAT+TGG + chr7_2:81715427-81715446 None:intergenic 30.0%
! CCAATTTTGTGAATGTCTTT+TGG - chr7_2:81715424-81715443 Msa1081790:CDS 30.0%
GAGAAAAACCCCAAAATCAA+GGG - chr7_2:81710851-81710870 Msa1081790:three_prime_UTR 35.0%
AGAAAAACCCCAAAATCAAG+GGG - chr7_2:81710852-81710871 Msa1081790:three_prime_UTR 35.0%
! GTTATAGTCGTTGTTGGTAA+CGG + chr7_2:81710960-81710979 None:intergenic 35.0%
GAAGAAGTTATAGTCGTTGT+TGG + chr7_2:81710966-81710985 None:intergenic 35.0%
! AACATCATTGGTAACCCTAA+TGG + chr7_2:81711033-81711052 None:intergenic 35.0%
TACTCCAGATTACATAACTC+CGG - chr7_2:81711201-81711220 Msa1081790:intron 35.0%
TTATCCGGAGTTATGTAATC+TGG + chr7_2:81711208-81711227 None:intergenic 35.0%
! TTCAAAATCCGCTGATTATC+CGG + chr7_2:81711223-81711242 None:intergenic 35.0%
!! GATAATCAGCGGATTTTGAA+CGG - chr7_2:81711223-81711242 Msa1081790:intron 35.0%
!! GAACGGTATCGATTTCAATA+AGG - chr7_2:81711240-81711259 Msa1081790:intron 35.0%
!! GGTATCGATTTCAATAAGGT+GGG - chr7_2:81711244-81711263 Msa1081790:intron 35.0%
!! GTATCGATTTCAATAAGGTG+GGG - chr7_2:81711245-81711264 Msa1081790:intron 35.0%
AGTAGTATTCAATTTCTCCG+GGG + chr7_2:81711392-81711411 None:intergenic 35.0%
TAAAAGCAAAAGATGTCGAC+TGG - chr7_2:81711411-81711430 Msa1081790:intron 35.0%
! AAAAGCAAAAGATGTCGACT+GGG - chr7_2:81711412-81711431 Msa1081790:intron 35.0%
TACATGTGCATACACAAACA+CGG + chr7_2:81711569-81711588 None:intergenic 35.0%
GGATGTCTCATCAAGTTTAT+GGG - chr7_2:81711629-81711648 Msa1081790:intron 35.0%
GGATTGTGAACATATGTTGA+TGG - chr7_2:81711729-81711748 Msa1081790:intron 35.0%
GCATGAAAAATGTCTACTCA+TGG - chr7_2:81711808-81711827 Msa1081790:intron 35.0%
GATCGCATACTTCTTGAATA+TGG + chr7_2:81711892-81711911 None:intergenic 35.0%
CATGTCGTATCCAATACTTA+TGG + chr7_2:81711930-81711949 None:intergenic 35.0%
AATAATCCGATGATTTCAGG+GGG + chr7_2:81712022-81712041 None:intergenic 35.0%
GAATAATCCGATGATTTCAG+GGG + chr7_2:81712023-81712042 None:intergenic 35.0%
TATCCCCATTATGCACAATT+GGG + chr7_2:81712062-81712081 None:intergenic 35.0%
ATATCCCCATTATGCACAAT+TGG + chr7_2:81712063-81712082 None:intergenic 35.0%
CAGACACCTTTCATAAAAAG+GGG + chr7_2:81712166-81712185 None:intergenic 35.0%
CCAGACACCTTTCATAAAAA+GGG + chr7_2:81712167-81712186 None:intergenic 35.0%
TCCAGACACCTTTCATAAAA+AGG + chr7_2:81712168-81712187 None:intergenic 35.0%
AGACTAGACATGATAGGATT+AGG - chr7_2:81712318-81712337 Msa1081790:intron 35.0%
AATGACATCATTAGAGAGAG+TGG - chr7_2:81712341-81712360 Msa1081790:intron 35.0%
ATGACATCATTAGAGAGAGT+GGG - chr7_2:81712342-81712361 Msa1081790:intron 35.0%
AGCACCTATAGTAGAAAAGT+TGG - chr7_2:81712368-81712387 Msa1081790:intron 35.0%
TGGTAGAAAATAGGCTTAGA+TGG - chr7_2:81712388-81712407 Msa1081790:CDS 35.0%
GAAAATAGGCTTAGATGGTT+TGG - chr7_2:81712393-81712412 Msa1081790:CDS 35.0%
TTGATCTACTCTTCTTACCA+CGG + chr7_2:81712445-81712464 None:intergenic 35.0%
GGTAAGAAGAGTAGATCAAA+TGG - chr7_2:81712446-81712465 Msa1081790:CDS 35.0%
AAGAAGAGTAGATCAAATGG+AGG - chr7_2:81712449-81712468 Msa1081790:CDS 35.0%
AGTCAAGTTAAAAGAGGTAG+AGG - chr7_2:81712474-81712493 Msa1081790:CDS 35.0%
AGATTTAGAGGTCAATGAGT+TGG - chr7_2:81712533-81712552 Msa1081790:intron 35.0%
! CAATGAGTTGGATCCAAATA+TGG - chr7_2:81712545-81712564 Msa1081790:intron 35.0%
! TTGTTGTTGTTGTTGTTGTC+TGG - chr7_2:81712642-81712661 Msa1081790:CDS 35.0%
CTGGACTAAACATATCTAAC+TGG - chr7_2:81712661-81712680 Msa1081790:CDS 35.0%
GACTAAACATATCTAACTGG+AGG - chr7_2:81712664-81712683 Msa1081790:intron 35.0%
! CACTAATTTTTCCATGTGGT+GGG + chr7_2:81712861-81712880 None:intergenic 35.0%
ACATGCATACTTGTCATAGA+TGG - chr7_2:81712940-81712959 Msa1081790:intron 35.0%
GGAAGTAGCTGTTGATATAA+CGG - chr7_2:81713044-81713063 Msa1081790:intron 35.0%
AGAATGTGACACATAGTTCT+GGG + chr7_2:81713091-81713110 None:intergenic 35.0%
AAATAGGGGTTACTAAAGCA+AGG + chr7_2:81713147-81713166 None:intergenic 35.0%
TGGGAAAGGTCCTTTAAATA+GGG + chr7_2:81713162-81713181 None:intergenic 35.0%
TTGGGAAAGGTCCTTTAAAT+AGG + chr7_2:81713163-81713182 None:intergenic 35.0%
TTTAAAGGACCTTTCCCAAA+AGG - chr7_2:81713164-81713183 Msa1081790:intron 35.0%
!! TTGGATCTTTGGTTTGCATA+GGG + chr7_2:81713198-81713217 None:intergenic 35.0%
!! TTTGGATCTTTGGTTTGCAT+AGG + chr7_2:81713199-81713218 None:intergenic 35.0%
AATGAACGGGATACTTGTAA+AGG + chr7_2:81713246-81713265 None:intergenic 35.0%
ACAAGTATCCCGTTCATTAA+TGG - chr7_2:81713248-81713267 Msa1081790:CDS 35.0%
! CTTTTCCACCATTAATGAAC+GGG + chr7_2:81713259-81713278 None:intergenic 35.0%
CTGTATAATGGTATGACTGT+AGG - chr7_2:81713342-81713361 Msa1081790:CDS 35.0%
! TTGAGGTACCATGTTTCAAA+AGG - chr7_2:81713427-81713446 Msa1081790:intron 35.0%
CTCCTTCAATCACAGAATAT+CGG + chr7_2:81713704-81713723 None:intergenic 35.0%
! TTGAAGGAGAAAAGCTTTGA+TGG - chr7_2:81713715-81713734 Msa1081790:intron 35.0%
! TTGTGGGCTATTATACTTCA+TGG - chr7_2:81713882-81713901 Msa1081790:intron 35.0%
TTGTCCTTCTGCTAATAACT+CGG + chr7_2:81713975-81713994 None:intergenic 35.0%
ATCTACATAACAGTCAGACA+AGG + chr7_2:81714027-81714046 None:intergenic 35.0%
!! GTCTATAAGCTTGGTGATTT+TGG - chr7_2:81714294-81714313 Msa1081790:intron 35.0%
TTCTCATTAAGGATTTCCTG+GGG + chr7_2:81714378-81714397 None:intergenic 35.0%
GGTGGTCATAATTCTCATTA+AGG + chr7_2:81714389-81714408 None:intergenic 35.0%
AAATATCAACCTTGTCAAGG+TGG + chr7_2:81714407-81714426 None:intergenic 35.0%
! ATTCTGGCATAGGTGATTTT+CGG + chr7_2:81714461-81714480 None:intergenic 35.0%
TGAAATTGCAATGAATGACC+AGG + chr7_2:81714531-81714550 None:intergenic 35.0%
! GCAATTTCAAAACTTGCTCA+AGG - chr7_2:81714542-81714561 Msa1081790:intron 35.0%
CGACTAATAAATCCAATGTG+TGG - chr7_2:81714638-81714657 Msa1081790:intron 35.0%
!!! TTTTGAGATGTAGTACAGCA+TGG + chr7_2:81714895-81714914 None:intergenic 35.0%
!!! TTTTGAGATGTAGTACAGCA+TGG + chr7_2:81714895-81714914 None:intergenic 35.0%
TAAACAGGTATAGCAATCCA+TGG + chr7_2:81715036-81715055 None:intergenic 35.0%
AAAGTGAAAAACAAGTGTGG+TGG + chr7_2:81715353-81715372 None:intergenic 35.0%
GGAAAAGTGAAAAACAAGTG+TGG + chr7_2:81715356-81715375 None:intergenic 35.0%
!! TTGTTTTTCACTTTTCCTGC+TGG - chr7_2:81715359-81715378 Msa1081790:CDS 35.0%
TGATCTACATAGACAGATGA+TGG + chr7_2:81715386-81715405 None:intergenic 35.0%
TGCAAGTTCTGTATTTGCAA+TGG - chr7_2:81715482-81715501 Msa1081790:CDS 35.0%
GTGTCTGTTGTACATTGTAA+TGG - chr7_2:81715514-81715533 Msa1081790:CDS 35.0%
AAACAACAGGCAAACATTTC+TGG + chr7_2:81715585-81715604 None:intergenic 35.0%
!!! TTGTTTTTTCACCTCCAGTT+GGG - chr7_2:81715599-81715618 Msa1081790:five_prime_UTR 35.0%
CGAGAAAAACCCCAAAATCA+AGG - chr7_2:81710850-81710869 Msa1081790:three_prime_UTR 40.0%
! TCTTCCTTCCCCTTGATTTT+GGG + chr7_2:81710863-81710882 None:intergenic 40.0%
! TTCTTCCTTCCCCTTGATTT+TGG + chr7_2:81710864-81710883 None:intergenic 40.0%
AAAATCAAGGGGAAGGAAGA+AGG - chr7_2:81710863-81710882 Msa1081790:three_prime_UTR 40.0%
GATTTGTCTCTGAATCGAGA+AGG + chr7_2:81711001-81711020 None:intergenic 40.0%
! TCATTGGTAACCCTAATGGA+AGG + chr7_2:81711029-81711048 None:intergenic 40.0%
!! ATCAGCATCGGTAACATCAT+TGG + chr7_2:81711045-81711064 None:intergenic 40.0%
ACATAACTCCGGATAATCAG+CGG - chr7_2:81711212-81711231 Msa1081790:intron 40.0%
!! CGGTATCGATTTCAATAAGG+TGG - chr7_2:81711243-81711262 Msa1081790:intron 40.0%
TGTAATGTAATGTGTTCCGC+AGG - chr7_2:81711345-81711364 Msa1081790:intron 40.0%
TCAATTTCTCCGGGGATTTA+GGG + chr7_2:81711384-81711403 None:intergenic 40.0%
TTCAATTTCTCCGGGGATTT+AGG + chr7_2:81711385-81711404 None:intergenic 40.0%
GGGATGTCTCATCAAGTTTA+TGG - chr7_2:81711628-81711647 Msa1081790:intron 40.0%
ACAGTCTCTTCTAAGTGGTA+GGG + chr7_2:81711841-81711860 None:intergenic 40.0%
TACAGTCTCTTCTAAGTGGT+AGG + chr7_2:81711842-81711861 None:intergenic 40.0%
TACCACTTAGAAGAGACTGT+AGG - chr7_2:81711841-81711860 Msa1081790:CDS 40.0%
ACCACTTAGAAGAGACTGTA+GGG - chr7_2:81711842-81711861 Msa1081790:CDS 40.0%
AGTATGCGATCTATGAAGCA+CGG - chr7_2:81711901-81711920 Msa1081790:CDS 40.0%
CGACATGTATGAGTGCATAT+CGG - chr7_2:81711943-81711962 Msa1081790:CDS 40.0%
GACATGTATGAGTGCATATC+GGG - chr7_2:81711944-81711963 Msa1081790:CDS 40.0%
ACTCAAAAATGGCTTCTGAG+TGG + chr7_2:81711972-81711991 None:intergenic 40.0%
ATAATCCGATGATTTCAGGG+GGG + chr7_2:81712021-81712040 None:intergenic 40.0%
ACCTCCCAATTGTGCATAAT+GGG - chr7_2:81712055-81712074 Msa1081790:CDS 40.0%
! CTCTAGCCCCTTTTTATGAA+AGG - chr7_2:81712157-81712176 Msa1081790:CDS 40.0%
!!! CCCTTTTTATGAAAGGTGTC+TGG - chr7_2:81712164-81712183 Msa1081790:CDS 40.0%
GTGGTAAGACTAGACATGAT+AGG - chr7_2:81712312-81712331 Msa1081790:intron 40.0%
TGACATCATTAGAGAGAGTG+GGG - chr7_2:81712343-81712362 Msa1081790:intron 40.0%
GAGGAGAGTCAAGTTAAAAG+AGG - chr7_2:81712468-81712487 Msa1081790:CDS 40.0%
!! TTTTCCATGTGGTGGGAAAT+GGG + chr7_2:81712854-81712873 None:intergenic 40.0%
!! TTTTTCCATGTGGTGGGAAA+TGG + chr7_2:81712855-81712874 None:intergenic 40.0%
! GCACTAATTTTTCCATGTGG+TGG + chr7_2:81712862-81712881 None:intergenic 40.0%
! GCAGCACTAATTTTTCCATG+TGG + chr7_2:81712865-81712884 None:intergenic 40.0%
ACTTGTCATAGATGGTGTCT+CGG - chr7_2:81712948-81712967 Msa1081790:intron 40.0%
!! TTGTTGATGGTCACCAGAAA+AGG + chr7_2:81712992-81713011 None:intergenic 40.0%
!! CAAGTTCCACAACTTGTTGA+TGG + chr7_2:81713005-81713024 None:intergenic 40.0%
CATCAACAAGTTGTGGAACT+TGG - chr7_2:81713003-81713022 Msa1081790:CDS 40.0%
ACAAGTTGTGGAACTTGGTA+AGG - chr7_2:81713008-81713027 Msa1081790:CDS 40.0%
CAGAATGTGACACATAGTTC+TGG + chr7_2:81713092-81713111 None:intergenic 40.0%
GGGAAAGGTCCTTTAAATAG+GGG + chr7_2:81713161-81713180 None:intergenic 40.0%
! ATAGGGATCTGTCTCCTTTT+GGG + chr7_2:81713181-81713200 None:intergenic 40.0%
AACCAAAGATCCAAATGTGC+AGG - chr7_2:81713204-81713223 Msa1081790:CDS 40.0%
TACCTGCACATTTGGATCTT+TGG + chr7_2:81713209-81713228 None:intergenic 40.0%
TAGAGTGATACCTGCACATT+TGG + chr7_2:81713217-81713236 None:intergenic 40.0%
AGTATCCCGTTCATTAATGG+TGG - chr7_2:81713251-81713270 Msa1081790:CDS 40.0%
GGTGGAAAAGTCATTGTAAC+TGG - chr7_2:81713269-81713288 Msa1081790:CDS 40.0%
!! CACTGACTTTCATGAGATTG+AGG - chr7_2:81713410-81713429 Msa1081790:CDS 40.0%
CATGAAGTTGAATGCGATGA+AGG + chr7_2:81713490-81713509 None:intergenic 40.0%
CTTCATCGCATTCAACTTCA+TGG - chr7_2:81713488-81713507 Msa1081790:intron 40.0%
TCTTATCAGCAAATTGGTCG+AGG - chr7_2:81713531-81713550 Msa1081790:intron 40.0%
CTTATCAGCAAATTGGTCGA+GGG - chr7_2:81713532-81713551 Msa1081790:intron 40.0%
AGTTACAGCTGGATACAGAA+AGG - chr7_2:81713625-81713644 Msa1081790:intron 40.0%
! ACGGAGACTTCTTCTTTTCT+TGG - chr7_2:81713663-81713682 Msa1081790:intron 40.0%
! CGGAGACTTCTTCTTTTCTT+GGG - chr7_2:81713664-81713683 Msa1081790:intron 40.0%
!! TCACAGAATATCGGTGTTAG+TGG + chr7_2:81713695-81713714 None:intergenic 40.0%
CACCGATATTCTGTGATTGA+AGG - chr7_2:81713699-81713718 Msa1081790:intron 40.0%
! AAGGAGAAAAGCTTTGATGG+AGG - chr7_2:81713718-81713737 Msa1081790:intron 40.0%
GTTCTCATGGTAACCTATAG+AGG + chr7_2:81713861-81713880 None:intergenic 40.0%
AGGTTACCATGAGAACATTG+TGG - chr7_2:81713865-81713884 Msa1081790:intron 40.0%
GGTTACCATGAGAACATTGT+GGG - chr7_2:81713866-81713885 Msa1081790:intron 40.0%
AATAGCCCACAATGTTCTCA+TGG + chr7_2:81713874-81713893 None:intergenic 40.0%
CGAACAACTGTACATTCAGA+TGG - chr7_2:81713913-81713932 Msa1081790:intron 40.0%
ACTGCGATTTATACACGACA+AGG - chr7_2:81714221-81714240 Msa1081790:intron 40.0%
CTGCGATTTATACACGACAA+GGG - chr7_2:81714222-81714241 Msa1081790:intron 40.0%
GAATTATGACCACCTTGACA+AGG - chr7_2:81714395-81714414 Msa1081790:intron 40.0%
AAATCACCTATGCCAGAATC+AGG - chr7_2:81714462-81714481 Msa1081790:intron 40.0%
CAAGTCTACAAACCACACAT+TGG + chr7_2:81714653-81714672 None:intergenic 40.0%
! TGTGTGGTTTGTAGACTTGT+AGG - chr7_2:81714654-81714673 Msa1081790:intron 40.0%
!!! CAGAATTTTCTGAAGCACCA+TGG - chr7_2:81715016-81715035 Msa1081790:CDS 40.0%
! GAACGATGCTACTTACTACT+TGG + chr7_2:81715129-81715148 None:intergenic 40.0%
! TAGAGAACCCAATTTTCGAC+AGG - chr7_2:81715302-81715321 Msa1081790:intron 40.0%
! AGAGAACCCAATTTTCGACA+GGG - chr7_2:81715303-81715322 Msa1081790:intron 40.0%
TTAAGGCCCTGTCGAAAATT+GGG + chr7_2:81715312-81715331 None:intergenic 40.0%
GTATTTGCAATGGTCCAGTT+AGG - chr7_2:81715492-81715511 Msa1081790:CDS 40.0%
ATGTACAACAGACACCTAAC+TGG + chr7_2:81715509-81715528 None:intergenic 40.0%
ACTGGAGGTGAAAAAACAAC+AGG + chr7_2:81715598-81715617 None:intergenic 40.0%
!!! GTTGTTTTTTCACCTCCAGT+TGG - chr7_2:81715598-81715617 Msa1081790:five_prime_UTR 40.0%
AAACCCCAAAATCAAGGGGA+AGG - chr7_2:81710856-81710875 Msa1081790:three_prime_UTR 45.0%
! CTTCCTTCCCCTTGATTTTG+GGG + chr7_2:81710862-81710881 None:intergenic 45.0%
!! TGAATCGAGAAGGTTCTGGA+AGG + chr7_2:81710991-81711010 None:intergenic 45.0%
TCTCTGAATCGAGAAGGTTC+TGG + chr7_2:81710995-81711014 None:intergenic 45.0%
!! ACCGATGCTGATTCAAGAGA+TGG - chr7_2:81711053-81711072 Msa1081790:exon 45.0%
GCCATCTCTTGAATCAGCAT+CGG + chr7_2:81711057-81711076 None:intergenic 45.0%
GCATGTAGTGCGAATCAGTA+TGG - chr7_2:81711708-81711727 Msa1081790:intron 45.0%
ACCCTACAGTCTCTTCTAAG+TGG + chr7_2:81711846-81711865 None:intergenic 45.0%
AGCACGGACACCATAAGTAT+TGG - chr7_2:81711917-81711936 Msa1081790:CDS 45.0%
TAATCCGATGATTTCAGGGG+GGG + chr7_2:81712020-81712039 None:intergenic 45.0%
GACCTCCCAATTGTGCATAA+TGG - chr7_2:81712054-81712073 Msa1081790:CDS 45.0%
CCTCCCAATTGTGCATAATG+GGG - chr7_2:81712056-81712075 Msa1081790:CDS 45.0%
ACCGGCAATGTTGTATGGTA+CGG - chr7_2:81712217-81712236 Msa1081790:intron 45.0%
TCCGTACCATACAACATTGC+CGG + chr7_2:81712221-81712240 None:intergenic 45.0%
TGTTGTATGGTACGGAGTGT+TGG - chr7_2:81712225-81712244 Msa1081790:intron 45.0%
! GTTGTATGGTACGGAGTGTT+GGG - chr7_2:81712226-81712245 Msa1081790:intron 45.0%
CGCTTACTTTACTCTCGTGT+TGG + chr7_2:81712262-81712281 None:intergenic 45.0%
CGAGAGTAAAGTAAGCGTAG+CGG - chr7_2:81712265-81712284 Msa1081790:intron 45.0%
GACATCATTAGAGAGAGTGG+GGG - chr7_2:81712344-81712363 Msa1081790:intron 45.0%
! AAGCCTTATCCCACTAAGTG+GGG + chr7_2:81712614-81712633 None:intergenic 45.0%
! CAAGCCTTATCCCACTAAGT+GGG + chr7_2:81712615-81712634 None:intergenic 45.0%
AAATGGGAGCCTATGTAGCA+TGG + chr7_2:81712838-81712857 None:intergenic 45.0%
CAGAAAAGGTAGGGCTAAGA+GGG + chr7_2:81712978-81712997 None:intergenic 45.0%
GATGGTCACCAGAAAAGGTA+GGG + chr7_2:81712987-81713006 None:intergenic 45.0%
TGATGGTCACCAGAAAAGGT+AGG + chr7_2:81712988-81713007 None:intergenic 45.0%
TGGTGACCATCAACAAGTTG+TGG - chr7_2:81712996-81713015 Msa1081790:CDS 45.0%
GTTGATATAACGGTAGCTGC+TGG - chr7_2:81713054-81713073 Msa1081790:intron 45.0%
TAGGGGTTACTAAAGCAAGG+AGG + chr7_2:81713144-81713163 None:intergenic 45.0%
!! GATCTGTCTCCTTTTGGGAA+AGG + chr7_2:81713176-81713195 None:intergenic 45.0%
! CATAGGGATCTGTCTCCTTT+TGG + chr7_2:81713182-81713201 None:intergenic 45.0%
TTTGATGGAGGTTCAAGCTC+TGG - chr7_2:81713730-81713749 Msa1081790:intron 45.0%
!! GGTTCAAGCATTGATGGAGT+AGG - chr7_2:81713792-81713811 Msa1081790:intron 45.0%
GGAAACCATGGCAAAAACGA+TGG + chr7_2:81714107-81714126 None:intergenic 45.0%
TGATAGTAGCCTTCCGATTG+AGG - chr7_2:81714332-81714351 Msa1081790:intron 45.0%
TGACATCCTGATTCTGGCAT+AGG + chr7_2:81714471-81714490 None:intergenic 45.0%
ATTGCAATGAATGACCAGGC+AGG + chr7_2:81714527-81714546 None:intergenic 45.0%
! GTGGTTTGTAGACTTGTAGG+AGG - chr7_2:81714657-81714676 Msa1081790:intron 45.0%
CTTAAGGCCCTGTCGAAAAT+TGG + chr7_2:81715313-81715332 None:intergenic 45.0%
!! GATCAGTGTCGATTGTGTCA+TGG - chr7_2:81715401-81715420 Msa1081790:CDS 45.0%
!! ATCGAGAAGGTTCTGGAAGG+CGG + chr7_2:81710988-81711007 None:intergenic 50.0%
ATCACCCCCCCTGAAATCAT+CGG - chr7_2:81712013-81712032 Msa1081790:CDS 50.0%
ATGCACAATTGGGAGGTCAC+TGG + chr7_2:81712052-81712071 None:intergenic 50.0%
CCCCATTATGCACAATTGGG+AGG + chr7_2:81712059-81712078 None:intergenic 50.0%
TTATCGGACAGCAGTCAGAC+CGG - chr7_2:81712199-81712218 Msa1081790:intron 50.0%
GTCAGACCGGCAATGTTGTA+TGG - chr7_2:81712212-81712231 Msa1081790:intron 50.0%
! AAGTAAGCGTAGCGGAGATG+AGG - chr7_2:81712273-81712292 Msa1081790:intron 50.0%
AGGATGTTGCGTTGGATGAG+TGG - chr7_2:81712293-81712312 Msa1081790:intron 50.0%
TCTTCTTACCACGGCGTCTA+CGG + chr7_2:81712436-81712455 None:intergenic 50.0%
CTTATCCCACTAAGTGGGGT+CGG + chr7_2:81712610-81712629 None:intergenic 50.0%
! CCAAGCCTTATCCCACTAAG+TGG + chr7_2:81712616-81712635 None:intergenic 50.0%
CCACTTAGTGGGATAAGGCT+TGG - chr7_2:81712613-81712632 Msa1081790:intron 50.0%
CCAGAAAAGGTAGGGCTAAG+AGG + chr7_2:81712979-81712998 None:intergenic 50.0%
! CCTCTTAGCCCTACCTTTTC+TGG - chr7_2:81712976-81712995 Msa1081790:CDS 50.0%
TGGTAAGGACTCTGTTGCAG+AGG - chr7_2:81713023-81713042 Msa1081790:intron 50.0%
!! GACACATAGTTCTGGGCCTT+CGG + chr7_2:81713084-81713103 None:intergenic 50.0%
TGCAGCTACATTGCGTTGCA+GGG - chr7_2:81713110-81713129 Msa1081790:intron 50.0%
GGGTTACTAAAGCAAGGAGG+AGG + chr7_2:81713141-81713160 None:intergenic 50.0%
ACGCAGTACACAGTTACAGC+TGG - chr7_2:81713614-81713633 Msa1081790:intron 50.0%
! GTTCAAGCTCTGGCAGCATT+GGG - chr7_2:81713740-81713759 Msa1081790:intron 50.0%
GGCTCCGAGTTATTAGCAGA+AGG - chr7_2:81713968-81713987 Msa1081790:intron 50.0%
!! GTCGTCCATCGTTTTTGCCA+TGG - chr7_2:81714099-81714118 Msa1081790:intron 50.0%
AGTAGCCTTCCGATTGAGGA+AGG - chr7_2:81714336-81714355 Msa1081790:intron 50.0%
CATCTCCTTCCTCAATCGGA+AGG + chr7_2:81714344-81714363 None:intergenic 50.0%
CGTGCATCTCCTTCCTCAAT+CGG + chr7_2:81714348-81714367 None:intergenic 50.0%
AGATGCACGTTATATGCCCC+AGG - chr7_2:81714359-81714378 Msa1081790:intron 50.0%
AATGAATGACCAGGCAGGAG+TGG + chr7_2:81714522-81714541 None:intergenic 50.0%
AACCGGATCAGGATCGATCA+TGG + chr7_2:81715257-81715276 None:intergenic 50.0%
TCGATCCTGATCCGGTTAAG+AGG - chr7_2:81715260-81715279 Msa1081790:intron 50.0%
TCTACCAACTCTCTGGCAGA+AGG + chr7_2:81715286-81715305 None:intergenic 50.0%
TGGGTTCTCTACCAACTCTC+TGG + chr7_2:81715293-81715312 None:intergenic 50.0%
! TAGACAGATGATGGTCCAGC+AGG + chr7_2:81715377-81715396 None:intergenic 50.0%
CACCTGATAATTCTCGCGCA+TGG - chr7_2:81715459-81715478 Msa1081790:CDS 50.0%
CACCATGCGCGAGAATTATC+AGG + chr7_2:81715464-81715483 None:intergenic 50.0%
GTCTTTCTCTACCCAACTGG+AGG + chr7_2:81715613-81715632 None:intergenic 50.0%
!! GGAAGGAAGAAGGCACCACT+CGG - chr7_2:81710873-81710892 Msa1081790:three_prime_UTR 55.0%
! CTTGTGTTACTCGCACCGAG+TGG + chr7_2:81710891-81710910 None:intergenic 55.0%
GGGCAAGGGCTATTATCCTG+CGG + chr7_2:81711364-81711383 None:intergenic 55.0%
TAGCCCTTGCCCTAAATCCC+CGG - chr7_2:81711372-81711391 Msa1081790:intron 55.0%
! TCTCCGGGGATTTAGGGCAA+GGG + chr7_2:81711378-81711397 None:intergenic 55.0%
! TTCTCCGGGGATTTAGGGCA+AGG + chr7_2:81711379-81711398 None:intergenic 55.0%
!! GTATGGTACGGAGTGTTGGG+CGG - chr7_2:81712229-81712248 Msa1081790:intron 55.0%
CGGAGATGAGGATGTTGCGT+TGG - chr7_2:81712285-81712304 Msa1081790:intron 55.0%
CTTCTTACCACGGCGTCTAC+GGG + chr7_2:81712435-81712454 None:intergenic 55.0%
ACTAAGTGGGGTCGGCTACA+TGG + chr7_2:81712602-81712621 None:intergenic 55.0%
ATGTAGCCGACCCCACTTAG+TGG - chr7_2:81712601-81712620 Msa1081790:intron 55.0%
TGTAGCCGACCCCACTTAGT+GGG - chr7_2:81712602-81712621 Msa1081790:intron 55.0%
CGACCCCACTTAGTGGGATA+AGG - chr7_2:81712608-81712627 Msa1081790:intron 55.0%
CTGCAGCTACATTGCGTTGC+AGG - chr7_2:81713109-81713128 Msa1081790:intron 55.0%
! GGTTCAAGCTCTGGCAGCAT+TGG - chr7_2:81713739-81713758 Msa1081790:intron 55.0%
GGCCATGATCGATCCTGATC+CGG - chr7_2:81715252-81715271 Msa1081790:intron 55.0%
GAAGGCCTCTTAACCGGATC+AGG + chr7_2:81715268-81715287 None:intergenic 55.0%
CTGGCAGAAGGCCTCTTAAC+CGG + chr7_2:81715274-81715293 None:intergenic 55.0%
GGCTCCCATTTCCCACCACA+TGG - chr7_2:81712847-81712866 Msa1081790:intron 60.0%
GGTAGCTGCTGGTAAGCCGA+AGG - chr7_2:81713065-81713084 Msa1081790:intron 60.0%
GAGGCCTTCTGCCAGAGAGT+TGG - chr7_2:81715279-81715298 Msa1081790:intron 60.0%
GAGAAGACCCGTAGACGCCG+TGG - chr7_2:81712425-81712444 Msa1081790:CDS 65.0%
GGCAAGTTGCCACTCCTGCC+TGG - chr7_2:81714510-81714529 Msa1081790:intron 65.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 81710771 81715632 81710771 ID=Msa1081790;Name=Msa1081790
chr7_2 mRNA 81710771 81715632 81710771 ID=Msa1081790-mRNA-1;Parent=Msa1081790;Name=Msa1081790-mRNA-1;_AED=0.14;_eAED=0.14;_QI=75|1|1|1|1|1|10|284|487
chr7_2 exon 81710771 81711150 81710771 ID=Msa1081790-mRNA-1:exon:21018;Parent=Msa1081790-mRNA-1
chr7_2 exon 81711840 81712193 81711840 ID=Msa1081790-mRNA-1:exon:21017;Parent=Msa1081790-mRNA-1
chr7_2 exon 81712388 81712536 81712388 ID=Msa1081790-mRNA-1:exon:21016;Parent=Msa1081790-mRNA-1
chr7_2 exon 81712642 81712682 81712642 ID=Msa1081790-mRNA-1:exon:21015;Parent=Msa1081790-mRNA-1
chr7_2 exon 81712757 81712863 81712757 ID=Msa1081790-mRNA-1:exon:21014;Parent=Msa1081790-mRNA-1
chr7_2 exon 81712972 81713039 81712972 ID=Msa1081790-mRNA-1:exon:21013;Parent=Msa1081790-mRNA-1
chr7_2 exon 81713178 81713444 81713178 ID=Msa1081790-mRNA-1:exon:21012;Parent=Msa1081790-mRNA-1
chr7_2 exon 81714970 81715036 81714970 ID=Msa1081790-mRNA-1:exon:21011;Parent=Msa1081790-mRNA-1
chr7_2 exon 81715142 81715202 81715142 ID=Msa1081790-mRNA-1:exon:21010;Parent=Msa1081790-mRNA-1
chr7_2 exon 81715304 81715632 81715304 ID=Msa1081790-mRNA-1:exon:21009;Parent=Msa1081790-mRNA-1
chr7_2 five_prime_UTR 81715558 81715632 81715558 ID=Msa1081790-mRNA-1:five_prime_utr;Parent=Msa1081790-mRNA-1
chr7_2 CDS 81715304 81715557 81715304 ID=Msa1081790-mRNA-1:cds;Parent=Msa1081790-mRNA-1
chr7_2 CDS 81715142 81715202 81715142 ID=Msa1081790-mRNA-1:cds;Parent=Msa1081790-mRNA-1
chr7_2 CDS 81714970 81715036 81714970 ID=Msa1081790-mRNA-1:cds;Parent=Msa1081790-mRNA-1
chr7_2 CDS 81713178 81713444 81713178 ID=Msa1081790-mRNA-1:cds;Parent=Msa1081790-mRNA-1
chr7_2 CDS 81712972 81713039 81712972 ID=Msa1081790-mRNA-1:cds;Parent=Msa1081790-mRNA-1
chr7_2 CDS 81712757 81712863 81712757 ID=Msa1081790-mRNA-1:cds;Parent=Msa1081790-mRNA-1
chr7_2 CDS 81712642 81712682 81712642 ID=Msa1081790-mRNA-1:cds;Parent=Msa1081790-mRNA-1
chr7_2 CDS 81712388 81712536 81712388 ID=Msa1081790-mRNA-1:cds;Parent=Msa1081790-mRNA-1
chr7_2 CDS 81711840 81712193 81711840 ID=Msa1081790-mRNA-1:cds;Parent=Msa1081790-mRNA-1
chr7_2 CDS 81711055 81711150 81711055 ID=Msa1081790-mRNA-1:cds;Parent=Msa1081790-mRNA-1
chr7_2 three_prime_UTR 81710771 81711054 81710771 ID=Msa1081790-mRNA-1:three_prime_utr;Parent=Msa1081790-mRNA-1
Gene Sequence

>Msa1081790

ATGACGAGAAAAACCCCAAAATCAAGGGGAAGGAAGAAGGCACCACTCGGTGCGAGTAACACAAGACAGTTACAGCTTCAGCTCAGCAAATTCTCTTTCAAACAATACAAACCGTTACCAACAACGACTATAACTTCTTCCGCCTTCCAGAACCTTCTCGATTCAGAGACAAATCAAAATCCTTCCATTAGGGTTACCAATGATGTTACCGATGCTGATTCAAGAGATGGCATTCTTAGTCAAGATTTCTTCTGTACTCCAGATTACATAACTCCGGATAATCAGCGGATTTTGAACGGTATCGATTTCAATAAGGATAATAGCCCTTGCCCTAAATCCCCGGAGAAATTGAATACTACTAAAAGCAAAAGATGTCGACTGGATGGTGTCTCGGCAAACCCTCTTAGCCCTACCTTTTCTGGTGACCATCAACAAGTTGTGGAACTTGGTAAGGACTCTGTTGCAGAGGAAGTAGCTGTTGATATAACGGTAGCTGCTGGTAAGCCGAAGGCCCAGAACTATGTGTCACATTCTGCAGCTACATTGCGTTGCAGGGCTATACCTCCTCCTTGCTTTAGTAACCCCTATTTAAAGGACCTTTCCCAAAAGGAGACAGATCCCTATGCAAACCAAAGATCCAAATGTGCAGGTTTCTTCCCTAAATTTACAGCTTATGATGGGCTGTCACGCTATCGCACTGACTTTCATGAGATTGAGCAAATTGGTCGAGGGTACTTTAGTTGTGTTTTTAAAGTATTAAAGCGAATAGATGGCTGCTTGTATGCTGTGAAACGCAGTACACAGTTACAGCTGGATACAGAAAGGAGAAAAGCTTTGATGGAGGTTCAAGCTCTGGCAGCATTGGGTTACCATGAGAACATTGTGGGCTATTATACTTCATGGTTTGAAAACGAACAACTGTACATTCAGATGGAGATATGTGATCATAGCTTATCTGTAAACAAAGGCTCCGAGTTATTAGCAGAAGGACAAGTGTTAGAAGTTTTATATCAAGTTGCTAATGCACTGCGATTTATACACGACAAGGGAATAGCTCATCTTGATCTTAAACCTGATAATATTTATGTAAAAAATGGTGTCTATAAGCTTGGTGATTTTGGATGTGCAACTCTTACTGATAGTAGCCTTCCGATTGAGGAAGGAGATGCACGTTATATGCCCCAGGAAATCCTTAATGAGAATTATGACCACCTTGACAAGGTTGATATTTTCTCTTTGGGAGTTTCTATTTATCAACTCATCCGAAAATCACCTATGCCAGAATCAGGATGTCATTTTTTGAATCTTAAAGAAGGCAAGTTGCCACTCCTGCCTGGTCATTCATTGCAATTTCAAAACTTGCTCAAGGCCATGATCGATCCTGATCCGGTTAAGAGGCCTTCTGCCAGAGAGTTGGTAGAGAACCCAATTTTCGACAGGGCCTTAAGAACAGCGAAAAATTGA

Protein sequence

>Msa1081790

MTRKTPKSRGRKKAPLGASNTRQLQLQLSKFSFKQYKPLPTTTITSSAFQNLLDSETNQNPSIRVTNDVTDADSRDGILSQDFFCTPDYITPDNQRILNGIDFNKDNSPCPKSPEKLNTTKSKRCRLDGVSANPLSPTFSGDHQQVVELGKDSVAEEVAVDITVAAGKPKAQNYVSHSAATLRCRAIPPPCFSNPYLKDLSQKETDPYANQRSKCAGFFPKFTAYDGLSRYRTDFHEIEQIGRGYFSCVFKVLKRIDGCLYAVKRSTQLQLDTERRKALMEVQALAALGYHENIVGYYTSWFENEQLYIQMEICDHSLSVNKGSELLAEGQVLEVLYQVANALRFIHDKGIAHLDLKPDNIYVKNGVYKLGDFGCATLTDSSLPIEEGDARYMPQEILNENYDHLDKVDIFSLGVSIYQLIRKSPMPESGCHFLNLKEGKLPLLPGHSLQFQNLLKAMIDPDPVKRPSARELVENPIFDRALRTAKN*