AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1396400


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1396400 MtrunA17_Chr7g0269001 97.959 490 7 1 1 487 1 490 0.0 999
Msa1396400 MtrunA17_Chr8g0369451 26.690 281 168 6 235 478 4 283 1.69e-21 97.1
Msa1396400 MtrunA17_Chr5g0409421 26.042 288 171 7 228 478 1 283 2.36e-21 96.7
Msa1396400 MtrunA17_Chr1g0173921 29.730 259 161 12 234 476 3 256 3.85e-20 94.4
Msa1396400 MtrunA17_Chr2g0286501 31.373 255 151 10 235 472 49 296 3.86e-20 94.4
Msa1396400 MtrunA17_Chr8g0386981 32.950 261 148 14 241 481 414 667 1.34e-19 92.4
Msa1396400 MtrunA17_Chr4g0051191 28.682 258 169 10 241 485 169 424 1.39e-19 90.9
Msa1396400 MtrunA17_Chr8g0374701 29.670 273 144 11 239 476 129 388 2.22e-19 91.3
Msa1396400 MtrunA17_Chr1g0157131 27.757 263 155 9 239 476 78 330 2.31e-19 90.9
Msa1396400 MtrunA17_Chr4g0059951 26.648 349 211 12 161 485 11 338 4.00e-19 90.5
Msa1396400 MtrunA17_Chr4g0045261 29.304 273 142 10 239 476 141 397 4.69e-19 90.1
Msa1396400 MtrunA17_Chr7g0260191 30.859 256 160 10 235 476 4 256 5.83e-19 90.1
Msa1396400 MtrunA17_Chr5g0402551 29.930 284 151 13 227 476 125 394 1.39e-18 88.6
Msa1396400 MtrunA17_Chr1g0202831 32.061 262 149 13 241 481 417 670 1.74e-18 89.0
Msa1396400 MtrunA17_Chr7g0258051 30.075 266 161 12 229 476 10 268 5.72e-18 87.0
Msa1396400 MtrunA17_Chr1g0190831 30.859 256 160 11 235 476 4 256 2.49e-17 85.1
Msa1396400 MtrunA17_Chr5g0419441 27.376 263 172 9 233 480 237 495 2.50e-17 85.1
Msa1396400 MtrunA17_Chr6g0479211 28.464 267 166 11 234 478 55 318 2.96e-17 82.8
Msa1396400 MtrunA17_Chr3g0130151 29.167 264 166 11 232 478 241 500 3.82e-17 84.3
Msa1396400 MtrunA17_Chr7g0256001 28.763 299 155 14 227 486 132 411 4.59e-17 84.0
Msa1396400 MtrunA17_Chr5g0402601 26.894 264 171 9 232 475 369 630 1.70e-16 82.4
Msa1396400 MtrunA17_Chr4g0074811 26.996 263 157 10 239 476 95 347 1.97e-16 82.0
Msa1396400 MtrunA17_Chr8g0339221 23.611 288 181 5 238 487 7 293 2.45e-16 81.3
Msa1396400 MtrunA17_Chr7g0274941 31.179 263 160 13 232 476 13 272 2.97e-16 79.3
Msa1396400 MtrunA17_Chr8g0345801 27.488 211 134 7 228 425 8 212 4.72e-16 78.2
Msa1396400 MtrunA17_Chr1g0185221 28.516 256 166 10 235 476 4 256 1.09e-15 79.7
Msa1396400 MtrunA17_Chr1g0205421 27.652 264 162 11 239 482 16 270 1.30e-15 79.0
Msa1396400 MtrunA17_Chr1g0173541 26.568 271 167 10 240 487 57 318 1.32e-15 79.3
Msa1396400 MtrunA17_Chr1g0170551 28.346 254 165 10 235 476 7 255 1.78e-15 79.7
Msa1396400 MtrunA17_Chr2g0321841 29.278 263 158 12 234 476 2 256 4.96e-15 78.2
Msa1396400 MtrunA17_Chr3g0114511 27.509 269 162 9 239 486 36 292 1.49e-14 75.9
Msa1396400 MtrunA17_Chr3g0140631 25.442 283 199 6 204 476 6 286 2.66e-14 73.6
Msa1396400 MtrunA17_Chr1g0190131 28.185 259 170 9 232 476 6 262 7.31e-14 72.0
Msa1396400 MtrunA17_Chr4g0059121 31.126 151 95 5 332 474 161 310 7.79e-14 72.8
Msa1396400 MtrunA17_Chr3g0132591 29.344 259 156 9 234 476 111 358 9.75e-14 73.2
Msa1396400 MtrunA17_Chr2g0310761 24.627 268 170 11 233 473 937 1199 1.00e-13 73.9
Msa1396400 MtrunA17_Chr8g0346081 27.106 273 176 12 230 485 11 277 1.07e-13 73.2
Msa1396400 MtrunA17_Chr2g0310781 23.881 268 170 11 234 473 844 1105 1.46e-13 73.6
Msa1396400 MtrunA17_Chr3g0133541 29.297 256 161 12 241 477 313 567 1.80e-13 72.8
Msa1396400 MtrunA17_Chr8g0357611 24.719 267 169 11 234 473 1369 1630 1.92e-13 73.2
Msa1396400 MtrunA17_Chr3g0102451 27.737 274 173 10 184 436 269 538 2.28e-13 72.4
Msa1396400 MtrunA17_Chr6g0453711 26.721 247 146 11 205 426 74 310 3.82e-13 71.6
Msa1396400 MtrunA17_Chr7g0218071 24.695 328 182 14 211 481 89 408 5.34e-13 71.6
Msa1396400 MtrunA17_Chr4g0061141 27.907 215 141 8 224 426 93 305 6.69e-13 71.2
Msa1396400 MtrunA17_Chr4g0066691 26.908 249 163 9 190 426 63 304 7.94e-13 70.9
Msa1396400 MtrunA17_Chr2g0286421 28.112 249 160 10 190 426 61 302 8.99e-13 70.5
Msa1396400 MtrunA17_Chr5g0441691 24.776 335 199 14 170 476 15 324 1.04e-12 70.1
Msa1396400 MtrunA17_Chr7g0267771 24.254 268 169 9 234 476 86 344 1.06e-12 70.1
Msa1396400 MtrunA17_Chr1g0211611 32.484 157 87 8 332 475 399 549 1.24e-12 70.1
Msa1396400 MtrunA17_Chr1g0196631 25.940 266 165 11 234 472 899 1159 1.57e-12 70.1
Msa1396400 MtrunA17_Chr3g0131861 28.169 213 138 8 226 426 88 297 1.68e-12 69.7
Msa1396400 MtrunA17_Chr8g0384001 26.481 287 162 14 220 476 16 283 1.68e-12 69.7
Msa1396400 MtrunA17_Chr6g0461841 25.746 268 165 11 234 473 966 1227 1.95e-12 70.1
Msa1396400 MtrunA17_Chr2g0305141 25.275 273 166 11 233 475 1081 1345 1.99e-12 70.1
Msa1396400 MtrunA17_Chr5g0396361 29.767 215 137 9 224 426 128 340 2.28e-12 69.3
Msa1396400 MtrunA17_Chr1g0205471 25.784 287 165 13 221 478 13 280 3.04e-12 68.9
Msa1396400 MtrunA17_Chr8g0355131 27.230 213 115 7 291 476 105 304 3.07e-12 68.9
Msa1396400 MtrunA17_Chr1g0197721 25.943 212 125 7 234 421 50 253 4.00e-12 68.2
Msa1396400 MtrunA17_Chr8g0385971 27.358 212 141 7 226 426 81 290 5.25e-12 68.2
Msa1396400 MtrunA17_Chr7g0276111 26.545 275 147 13 239 476 148 404 6.87e-12 67.8
Msa1396400 MtrunA17_Chr7g0273851 25.862 290 157 13 222 485 14 271 8.57e-12 67.8
Msa1396400 MtrunA17_Chr1g0176421 26.259 278 151 14 234 476 159 417 1.70e-11 66.6
Msa1396400 MtrunA17_Chr3g0129771 28.293 205 110 8 239 420 37 227 2.68e-11 65.9
Msa1396400 MtrunA17_Chr5g0432541 24.904 261 165 12 241 478 33 285 2.76e-11 65.9
Msa1396400 MtrunA17_Chr4g0000431 26.471 272 160 11 239 481 28 288 3.53e-11 65.9
Msa1396400 MtrunA17_Chr6g0455931 26.255 259 164 13 241 478 35 287 4.67e-11 65.1
Msa1396400 MtrunA17_Chr5g0397101 25.670 261 159 9 240 475 72 322 4.89e-11 65.1
Msa1396400 MtrunA17_Chr3g0141871 24.088 274 177 10 222 484 19 272 5.74e-11 64.3
Msa1396400 MtrunA17_Chr8g0383451 27.723 202 123 8 241 426 4 198 7.23e-11 64.3
Msa1396400 MtrunA17_Chr4g0074791 24.314 255 173 8 239 475 99 351 7.52e-11 64.3
Msa1396400 MtrunA17_Chr3g0107011 29.279 222 130 10 284 487 64 276 7.67e-11 64.3
Msa1396400 MtrunA17_Chr6g0450571 25.442 283 165 11 234 484 15 283 7.90e-11 64.7
Msa1396400 MtrunA17_Chr3g0099951 24.752 202 142 5 239 431 18 218 8.81e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1396400 AT1G02970.1 59.138 487 187 6 2 480 15 497 0.0 589
Msa1396400 AT4G19110.1 26.978 278 165 6 238 478 7 283 5.44e-23 102
Msa1396400 AT4G19110.2 26.978 278 165 6 238 478 7 283 5.61e-23 102
Msa1396400 AT5G45430.2 26.619 278 166 6 238 478 7 283 1.15e-20 95.1
Msa1396400 AT5G45430.1 26.619 278 166 6 238 478 7 283 1.23e-20 95.1
Msa1396400 AT3G20860.1 29.851 268 170 11 234 487 3 266 3.48e-20 93.2
Msa1396400 AT1G49580.1 30.961 281 148 12 239 487 154 420 8.58e-20 92.8
Msa1396400 AT3G19100.1 30.000 270 144 11 239 476 148 404 1.47e-19 92.4
Msa1396400 AT1G76040.2 29.434 265 156 11 234 476 113 368 1.93e-19 91.7
Msa1396400 AT1G76040.3 29.434 265 156 11 234 476 113 368 2.04e-19 91.3
Msa1396400 AT1G08650.1 29.278 263 167 7 239 484 19 279 1.41e-18 86.3
Msa1396400 AT3G12200.1 27.612 268 177 9 234 487 18 282 5.08e-18 87.4
Msa1396400 AT4G19110.3 28.000 225 125 5 291 478 3 227 1.19e-17 85.5
Msa1396400 AT3G63280.2 30.078 256 162 11 235 476 4 256 2.33e-17 85.1
Msa1396400 AT3G63280.3 30.078 256 162 11 235 476 4 256 2.33e-17 85.1
Msa1396400 AT3G63280.1 30.078 256 162 11 235 476 4 256 2.33e-17 85.1
Msa1396400 AT3G50530.1 29.371 286 150 13 227 476 139 408 2.54e-17 85.5
Msa1396400 AT3G63280.4 30.078 256 162 11 235 476 58 310 4.51e-17 84.7
Msa1396400 AT4G12020.3 27.675 271 162 11 225 482 1616 1865 8.78e-17 84.3
Msa1396400 AT4G12020.10 27.675 271 162 11 225 482 1608 1857 9.09e-17 84.3
Msa1396400 AT1G08650.2 29.200 250 158 7 239 471 19 266 1.68e-16 80.1
Msa1396400 AT4G13020.7 25.424 295 178 8 228 485 1 290 2.03e-16 81.3
Msa1396400 AT4G13020.4 25.424 295 178 8 228 485 1 290 2.28e-16 81.3
Msa1396400 AT4G13020.1 25.424 295 178 8 228 485 1 290 2.30e-16 81.6
Msa1396400 AT4G13020.6 25.424 295 178 8 228 485 1 290 2.33e-16 81.3
Msa1396400 AT4G08470.1 27.413 259 171 10 233 477 301 556 2.80e-16 82.0
Msa1396400 AT4G04700.1 26.996 263 161 10 239 476 32 288 3.18e-16 81.6
Msa1396400 AT4G13020.2 25.424 295 178 8 228 485 9 298 3.55e-16 81.3
Msa1396400 AT4G13020.3 25.424 295 178 8 228 485 9 298 3.57e-16 81.3
Msa1396400 AT1G18890.1 28.571 266 157 10 240 481 68 324 3.97e-16 81.3
Msa1396400 AT5G28290.1 28.405 257 169 9 235 478 4 258 4.13e-16 81.3
Msa1396400 AT5G28290.2 28.405 257 169 9 235 478 4 258 4.13e-16 81.3
Msa1396400 AT5G28290.3 28.405 257 169 9 235 478 4 258 4.65e-16 81.3
Msa1396400 AT1G69220.1 27.376 263 172 9 233 480 247 505 4.96e-16 81.6
Msa1396400 AT4G04710.2 25.391 256 168 7 239 476 40 290 5.79e-16 80.9
Msa1396400 AT3G12200.2 26.619 278 177 10 234 487 18 292 6.14e-16 80.9
Msa1396400 AT3G10540.1 25.095 263 162 9 234 469 44 298 6.70e-16 80.5
Msa1396400 AT4G04710.4 25.188 266 169 7 239 476 40 303 9.65e-16 80.1
Msa1396400 AT1G50240.3 30.040 253 164 10 234 476 5 254 1.03e-15 80.9
Msa1396400 AT1G50240.2 30.040 253 164 10 234 476 5 254 1.03e-15 80.9
Msa1396400 AT4G04710.1 25.188 266 169 7 239 476 40 303 1.05e-15 80.1
Msa1396400 AT1G54510.4 29.545 264 166 11 238 483 7 268 1.20e-15 80.1
Msa1396400 AT1G54510.2 29.545 264 166 11 238 483 7 268 1.20e-15 80.1
Msa1396400 AT1G54510.1 29.545 264 166 11 238 483 7 268 1.20e-15 80.1
Msa1396400 AT1G54510.3 29.545 264 166 11 238 483 7 268 1.20e-15 80.1
Msa1396400 AT4G21940.3 26.054 261 162 10 239 476 106 358 1.26e-15 79.7
Msa1396400 AT4G21940.2 26.054 261 162 10 239 476 106 358 1.55e-15 79.7
Msa1396400 AT3G21220.2 24.345 267 178 9 233 481 68 328 1.76e-15 78.2
Msa1396400 AT3G21220.1 24.345 267 178 9 233 481 68 328 1.76e-15 78.2
Msa1396400 AT4G29810.1 26.119 268 175 11 233 480 68 332 1.77e-15 78.2
Msa1396400 AT4G21940.1 26.054 261 162 10 239 476 106 358 1.88e-15 79.3
Msa1396400 AT4G29810.2 26.119 268 175 11 233 480 77 341 1.90e-15 78.2
Msa1396400 AT1G12680.1 28.679 265 156 11 241 484 113 365 2.30e-15 79.0
Msa1396400 AT5G12480.1 24.308 325 200 12 178 475 9 314 2.94e-15 78.6
Msa1396400 AT5G04510.2 24.715 263 163 9 234 469 43 297 3.29e-15 77.8
Msa1396400 AT5G04510.1 24.715 263 163 9 234 469 43 297 3.67e-15 78.2
Msa1396400 AT3G15220.1 26.236 263 181 7 235 486 15 275 5.94e-15 78.2
Msa1396400 AT5G66850.2 26.616 263 171 9 241 483 352 612 8.32e-15 77.4
Msa1396400 AT5G66850.1 26.616 263 171 9 241 483 352 612 9.39e-15 77.4
Msa1396400 AT1G12580.1 26.568 271 156 10 239 480 48 304 1.04e-14 77.0
Msa1396400 AT5G19450.2 26.415 265 164 9 240 481 62 318 1.26e-14 76.6
Msa1396400 AT5G19450.1 26.415 265 164 9 240 481 62 318 1.26e-14 76.6
Msa1396400 AT4G04695.1 25.843 267 159 10 239 476 32 288 1.55e-14 76.3
Msa1396400 AT4G13020.5 23.607 305 180 10 228 485 1 299 1.88e-14 75.9
Msa1396400 AT4G13020.8 23.607 305 180 10 228 485 1 299 2.47e-14 75.1
Msa1396400 AT2G45490.1 25.000 256 176 6 233 476 20 271 2.83e-14 73.9
Msa1396400 AT1G69220.2 27.626 257 167 9 239 480 226 478 3.58e-14 75.9
Msa1396400 AT1G30270.1 27.885 208 137 7 291 486 88 294 5.63e-14 74.3
Msa1396400 AT1G30270.2 27.885 208 137 7 291 486 88 294 5.73e-14 74.3
Msa1396400 AT3G49370.1 29.885 174 93 6 264 421 180 340 1.41e-13 73.6
Msa1396400 AT1G30270.3 30.588 170 107 6 327 486 29 197 1.53e-13 72.8
Msa1396400 AT2G25880.1 26.070 257 172 7 233 476 23 274 1.59e-13 71.6
Msa1396400 AT2G25880.4 26.070 257 172 7 233 476 36 287 1.61e-13 71.6
Msa1396400 AT3G57530.2 25.455 275 165 12 240 487 68 329 2.03e-13 72.4
Msa1396400 AT4G29810.3 26.054 261 170 11 233 473 77 334 2.55e-13 71.6
Msa1396400 AT1G01140.3 25.275 273 181 9 229 483 12 279 4.25e-13 71.6
Msa1396400 AT3G57530.1 25.455 275 165 12 240 487 68 329 4.37e-13 72.0
Msa1396400 AT1G01140.1 25.275 273 181 9 229 483 12 279 4.38e-13 71.6
Msa1396400 AT1G23700.2 28.889 270 164 13 234 484 15 275 4.43e-13 71.2
Msa1396400 AT5G50860.1 28.365 208 136 7 230 426 109 314 4.48e-13 72.0
Msa1396400 AT1G79570.2 25.180 278 173 13 225 473 953 1224 5.52e-13 72.0
Msa1396400 AT1G79570.1 25.180 278 173 13 225 473 953 1224 5.52e-13 72.0
Msa1396400 AT4G36070.1 28.000 200 116 6 241 421 77 267 5.75e-13 71.6
Msa1396400 AT5G50860.2 28.365 208 136 7 230 426 109 314 5.87e-13 71.2
Msa1396400 AT1G23700.3 28.889 270 164 13 234 484 15 275 6.41e-13 71.2
Msa1396400 AT1G23700.1 28.889 270 164 13 234 484 15 275 7.13e-13 70.9
Msa1396400 AT5G58350.1 27.586 261 162 14 239 478 23 277 7.18e-13 71.2
Msa1396400 AT4G36070.2 28.000 200 116 6 241 421 77 267 7.92e-13 71.2
Msa1396400 AT1G49160.2 28.155 206 111 8 239 421 32 223 9.63e-13 70.9
Msa1396400 AT1G54610.1 26.693 251 165 9 188 426 75 318 1.12e-12 70.9
Msa1396400 AT1G54610.3 26.693 251 165 9 188 426 75 318 1.12e-12 70.9
Msa1396400 AT1G54610.2 26.693 251 165 9 188 426 75 318 1.12e-12 70.9
Msa1396400 AT3G50730.1 25.856 263 170 9 232 472 33 292 1.36e-12 69.7
Msa1396400 AT2G38910.1 25.228 329 182 14 188 476 86 390 1.45e-12 70.5
Msa1396400 AT5G04510.3 25.943 212 125 7 234 421 43 246 1.69e-12 68.6
Msa1396400 AT4G04740.4 25.620 242 149 10 258 476 92 325 2.08e-12 69.7
Msa1396400 AT4G04740.6 25.620 242 149 10 258 476 92 325 2.08e-12 69.7
Msa1396400 AT4G04740.5 25.620 242 149 10 258 476 92 325 2.08e-12 69.7
Msa1396400 AT4G04740.3 25.620 242 149 10 258 476 92 325 2.08e-12 69.7
Msa1396400 AT4G04740.1 25.620 242 149 10 258 476 92 325 2.08e-12 69.7
Msa1396400 AT4G04740.7 25.620 242 149 10 258 476 92 325 2.08e-12 69.7
Msa1396400 AT3G23000.1 25.893 224 148 7 277 486 69 288 2.10e-12 69.3
Msa1396400 AT2G26980.1 26.540 211 138 6 284 480 64 271 2.45e-12 68.9
Msa1396400 AT1G16270.1 24.719 267 169 11 234 473 862 1123 2.49e-12 70.1
Msa1396400 AT1G16270.2 24.719 267 169 11 234 473 862 1123 2.49e-12 70.1
Msa1396400 AT1G16270.3 24.719 267 169 11 234 473 862 1123 2.49e-12 70.1
Msa1396400 AT2G26980.5 26.540 211 138 6 284 480 64 271 2.61e-12 68.9
Msa1396400 AT5G24360.1 28.044 271 140 11 257 478 480 744 2.79e-12 69.7
Msa1396400 AT5G24360.2 28.044 271 140 11 257 478 486 750 2.95e-12 69.7
Msa1396400 AT4G04740.2 25.620 242 149 10 258 476 92 325 3.03e-12 69.3
Msa1396400 AT5G24360.3 28.044 271 140 11 257 478 466 730 3.36e-12 69.7
Msa1396400 AT2G26980.3 26.540 211 138 6 284 480 64 271 4.03e-12 68.6
Msa1396400 AT2G26980.4 26.540 211 138 6 284 480 74 281 4.12e-12 68.6
Msa1396400 AT3G07980.1 27.068 266 170 11 239 485 24 284 4.28e-12 69.3
Msa1396400 AT3G07980.2 27.068 266 170 11 239 485 24 284 4.77e-12 69.3
Msa1396400 AT5G12180.1 26.692 266 154 12 239 476 77 329 5.57e-12 68.6
Msa1396400 AT2G35050.1 24.286 280 169 12 234 484 973 1238 5.99e-12 68.9
Msa1396400 AT2G35050.2 24.286 280 169 12 234 484 973 1238 5.99e-12 68.9
Msa1396400 AT1G59580.2 24.272 309 170 12 222 476 19 317 6.16e-12 67.8
Msa1396400 AT1G59580.1 24.272 309 170 12 222 476 19 317 6.16e-12 67.8
Msa1396400 AT4G26890.1 29.070 172 109 8 316 479 88 254 7.44e-12 67.8
Msa1396400 AT5G19360.1 25.191 262 163 10 239 476 72 324 1.01e-11 67.4
Msa1396400 AT3G10660.2 25.180 278 169 11 228 476 175 442 1.22e-11 67.4
Msa1396400 AT3G10660.1 25.180 278 169 11 228 476 175 442 1.22e-11 67.4
Msa1396400 AT4G10010.2 26.522 230 148 9 215 426 130 356 1.23e-11 67.4
Msa1396400 AT3G53930.2 24.345 267 180 8 230 478 15 277 1.51e-11 67.4
Msa1396400 AT3G12200.4 26.570 207 137 7 294 487 12 216 1.56e-11 67.0
Msa1396400 AT3G45640.1 28.251 223 139 9 221 426 20 238 1.59e-11 66.2
Msa1396400 AT1G04700.1 24.535 269 171 11 233 474 764 1027 1.62e-11 67.4
Msa1396400 AT1G04700.2 24.535 269 171 11 233 474 764 1027 1.62e-11 67.4
Msa1396400 AT3G53930.1 24.345 267 180 8 230 478 15 277 1.63e-11 67.4
Msa1396400 AT5G23580.1 24.809 262 160 10 241 476 28 278 1.65e-11 66.6
Msa1396400 AT3G22420.3 25.573 262 140 11 239 474 99 331 1.84e-11 67.0
Msa1396400 AT3G22420.4 25.573 262 140 11 239 474 99 331 1.94e-11 67.0
Msa1396400 AT3G22420.1 25.573 262 140 11 239 474 28 260 2.18e-11 66.6
Msa1396400 AT3G22420.5 25.573 262 140 11 239 474 28 260 2.46e-11 66.6
Msa1396400 AT2G35890.2 24.138 261 165 9 240 476 137 388 2.51e-11 66.2
Msa1396400 AT2G35890.1 24.138 261 165 9 240 476 137 388 2.51e-11 66.2
Msa1396400 AT1G71530.2 27.273 209 137 8 230 426 142 347 2.55e-11 66.2
Msa1396400 AT1G53570.5 25.097 259 153 10 241 485 220 451 2.55e-11 66.2
Msa1396400 AT1G71530.1 27.094 203 135 7 235 426 147 347 3.79e-11 65.9
Msa1396400 AT5G14720.1 25.000 276 169 10 234 481 15 280 3.92e-11 65.9
Msa1396400 AT5G14720.2 25.000 276 169 10 234 481 15 280 3.92e-11 65.9
Msa1396400 AT1G71530.4 26.606 218 145 8 230 435 142 356 4.23e-11 65.1
Msa1396400 AT5G39420.1 29.064 203 131 8 235 426 105 305 4.27e-11 65.9
Msa1396400 AT1G54960.1 27.692 260 161 10 241 477 74 329 4.37e-11 65.9
Msa1396400 AT1G54960.2 27.692 260 161 10 241 477 74 329 4.37e-11 65.9
Msa1396400 AT1G53050.2 27.092 251 147 11 215 448 108 339 4.42e-11 65.9
Msa1396400 AT1G53050.1 27.092 251 147 11 215 448 108 339 4.42e-11 65.9
Msa1396400 AT4G24100.1 24.911 281 171 10 227 478 25 294 4.44e-11 65.9
Msa1396400 AT4G30960.1 26.389 216 131 9 291 487 81 287 4.54e-11 65.1
Msa1396400 AT5G10930.1 25.581 258 160 9 241 476 18 265 4.55e-11 65.1
Msa1396400 AT4G24100.2 24.911 281 171 10 227 478 25 294 5.07e-11 65.5
Msa1396400 AT4G24100.4 24.911 281 171 10 227 478 41 310 5.21e-11 65.5
Msa1396400 AT4G24100.3 24.911 281 171 10 227 478 41 310 5.60e-11 65.5
Msa1396400 AT4G08470.2 31.333 150 95 5 233 376 301 448 5.73e-11 65.1
Msa1396400 AT1G71530.3 27.273 209 137 8 230 426 142 347 5.80e-11 65.1
Msa1396400 AT1G35670.1 24.345 267 177 9 230 476 21 282 6.48e-11 65.1
Msa1396400 AT3G59790.1 28.141 199 132 7 238 426 63 260 6.58e-11 64.7
Msa1396400 AT4G23650.1 27.203 261 157 11 240 476 83 334 6.71e-11 65.1
Msa1396400 AT1G48260.1 29.208 202 125 9 281 468 59 256 7.66e-11 64.7
Msa1396400 AT5G55090.1 26.012 173 117 7 316 480 89 258 9.72e-11 64.3
Msa1396400 AT1G74330.3 28.440 218 138 9 224 426 109 323 9.72e-11 64.7

Find 139 sgRNAs with CRISPR-Local

Find 339 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTTCCTTCCCCTTGATTT+TGG 0.064851 tig0022022:-70707 None:intergenic
GTCTATAAGCTTGGTGATTT+TGG 0.139018 tig0022022:+74135 Msa1396400:CDS
TTCAATTTCTCCGGGGATTT+AGG 0.142730 tig0022022:-71227 None:intergenic
CCATCATAAGCTGTAAATTT+AGG 0.146319 tig0022022:-73213 None:intergenic
CTTAAGGCCCTGTCGAAAAT+TGG 0.161314 tig0022022:-75155 None:intergenic
AAACAACAGGCAAACATTTC+TGG 0.179440 tig0022022:-75431 None:intergenic
CATAGGGATCTGTCTCCTTT+TGG 0.182775 tig0022022:-73020 None:intergenic
CTTTAGTAACCCCTATTTAA+AGG 0.192157 tig0022022:+72990 Msa1396400:CDS
TTGGGAAAGGTCCTTTAAAT+AGG 0.227358 tig0022022:-73001 None:intergenic
TACCTGCACATTTGGATCTT+TGG 0.232933 tig0022022:-73047 None:intergenic
CTGCAGCTACATTGCGTTGC+AGG 0.263739 tig0022022:+72950 Msa1396400:CDS
CCAAAAGACATTCACAAAAT+TGG 0.268877 tig0022022:-75273 None:intergenic
GGTGGTCATAATTCTCATTA+AGG 0.271396 tig0022022:-74227 None:intergenic
TCAATTTCTCCGGGGATTTA+GGG 0.297218 tig0022022:-71226 None:intergenic
TACTTCTCTTATCAGCAAAT+TGG 0.305098 tig0022022:+73366 Msa1396400:intron
TTCAAAATCCGCTGATTATC+CGG 0.313101 tig0022022:-71066 None:intergenic
CAAATCAAAATCCTTCCATT+AGG 0.314586 tig0022022:+70861 Msa1396400:CDS
AATTCTCATTAAGGATTTCC+TGG 0.316106 tig0022022:-74218 None:intergenic
ATGGACTTAAAATATATTAA+TGG 0.316976 tig0022022:+75382 Msa1396400:three_prime_UTR
TGGGAAAGGTCCTTTAAATA+GGG 0.319625 tig0022022:-73000 None:intergenic
TTCTTAGTCAAGATTTCTTC+TGG 0.320527 tig0022022:+70924 Msa1396400:CDS
GAACGGTATCGATTTCAATA+AGG 0.332586 tig0022022:+71086 Msa1396400:CDS
TTGTGGGCTATTATACTTCA+TGG 0.333207 tig0022022:+73723 Msa1396400:CDS
CATCATAAGCTGTAAATTTA+GGG 0.350243 tig0022022:-73212 None:intergenic
TAGAGTGATACCTGCACATT+TGG 0.356447 tig0022022:-73055 None:intergenic
CACCATGCGCGAGAATTATC+AGG 0.356776 tig0022022:-75310 None:intergenic
CAGAATGTGACACATAGTTC+TGG 0.366945 tig0022022:-72930 None:intergenic
CAAGTTCCACAACTTGTTGA+TGG 0.375134 tig0022022:-72843 None:intergenic
TCTCTGAATCGAGAAGGTTC+TGG 0.376382 tig0022022:-70838 None:intergenic
AAATCAAAATCCTTCCATTA+GGG 0.376468 tig0022022:+70862 Msa1396400:CDS
TTGAAGGAGAAAAGCTTTGA+TGG 0.378377 tig0022022:+73556 Msa1396400:intron
AAAGTATTAAAGCGAATAGA+TGG 0.379092 tig0022022:+73414 Msa1396400:CDS
TTAGTAGTATTCAATTTCTC+CGG 0.379490 tig0022022:-71236 None:intergenic
GGTTCAAGCTCTGGCAGCAT+TGG 0.388551 tig0022022:+73580 Msa1396400:CDS
CCTAAATTTACAGCTTATGA+TGG 0.388769 tig0022022:+73213 Msa1396400:CDS
GTTCAAGCTCTGGCAGCATT+GGG 0.395220 tig0022022:+73581 Msa1396400:CDS
GACACATAGTTCTGGGCCTT+CGG 0.398281 tig0022022:-72922 None:intergenic
TTAAGGCCCTGTCGAAAATT+GGG 0.408531 tig0022022:-75154 None:intergenic
AATAGTAGTAATAGTGTGTT+TGG 0.408847 tig0022022:-70619 None:intergenic
TTATTCTTCATCTTCTTCAC+TGG 0.421992 tig0022022:+70640 Msa1396400:five_prime_UTR
AAATCACCTATGCCAGAATC+AGG 0.426205 tig0022022:+74303 Msa1396400:CDS
ATGTACAACAGACACCTAAC+TGG 0.427081 tig0022022:-75355 None:intergenic
CTGGCAGAAGGCCTCTTAAC+CGG 0.429177 tig0022022:-75116 None:intergenic
ATCAGCATCGGTAGCATCAT+TGG 0.430519 tig0022022:-70888 None:intergenic
TTATCCGGAGTTATGTAATC+TGG 0.433913 tig0022022:-71051 None:intergenic
TTTAAAGGACCTTTCCCAAA+AGG 0.437149 tig0022022:+73005 Msa1396400:CDS
CATCAACAAGTTGTGGAACT+TGG 0.439973 tig0022022:+72844 Msa1396400:CDS
GAAGGCCTCTTAACCGGATC+AGG 0.440181 tig0022022:-75110 None:intergenic
AGCATCATTGGTAACCCTAA+TGG 0.442002 tig0022022:-70876 None:intergenic
GTATTTGCAATGGTCCAGTT+AGG 0.445422 tig0022022:+75341 Msa1396400:three_prime_UTR
TGTGTCTTTCTCTACCCAAC+TGG 0.450537 tig0022022:-75462 None:intergenic
CGTGCATCTCCTTCCTCAAT+CGG 0.457649 tig0022022:-74186 None:intergenic
GAAGAAGTTATAGTCGTTGT+TGG 0.463269 tig0022022:-70809 None:intergenic
GTGTCTGTTGTACATTGTAA+TGG 0.464251 tig0022022:+75363 Msa1396400:three_prime_UTR
TTTGATGGAGGTTCAAGCTC+TGG 0.468681 tig0022022:+73571 Msa1396400:CDS
GGCAAGTTGCCACTCCTGCC+TGG 0.472331 tig0022022:+74351 Msa1396400:CDS
TGATAGTAGCCTTCCGATTG+AGG 0.477068 tig0022022:+74173 Msa1396400:CDS
AAAATCAAGGGGAAGGAAGA+AGG 0.477940 tig0022022:+70709 Msa1396400:CDS
TTGGATCTTTGGTTTGCATA+GGG 0.480814 tig0022022:-73036 None:intergenic
TAAAAGCAAAAGATGTCGAC+TGG 0.484851 tig0022022:+71256 Msa1396400:CDS
GGCCATGATCGATCCTGATC+CGG 0.491918 tig0022022:+75097 Msa1396400:intron
ATTCTCATTAAGGATTTCCT+GGG 0.493473 tig0022022:-74217 None:intergenic
CACTGACTTTCATGAGATTG+AGG 0.501967 tig0022022:+73251 Msa1396400:CDS
TTGTTGATGGTCACCAGAAA+AGG 0.502504 tig0022022:-72830 None:intergenic
TCGATCCTGATCCGGTTAAG+AGG 0.503788 tig0022022:+75105 Msa1396400:CDS
TTCTCCGGGGATTTAGGGCA+AGG 0.506459 tig0022022:-71221 None:intergenic
TAGTAGTATTCAATTTCTCC+GGG 0.510401 tig0022022:-71235 None:intergenic
AGAATGTGACACATAGTTCT+GGG 0.510819 tig0022022:-72929 None:intergenic
TCTTATCAGCAAATTGGTCG+AGG 0.512410 tig0022022:+73372 Msa1396400:intron
ACAAGTTGTGGAACTTGGTA+AGG 0.513324 tig0022022:+72849 Msa1396400:CDS
CTAAATTTACAGCTTATGAT+GGG 0.515148 tig0022022:+73214 Msa1396400:CDS
TGCAGCTACATTGCGTTGCA+GGG 0.517169 tig0022022:+72951 Msa1396400:CDS
TGGGTTCTCTACCAACTCTC+TGG 0.519512 tig0022022:-75135 None:intergenic
CCAGAAAAGGTAGGGCTAAG+AGG 0.520423 tig0022022:-72817 None:intergenic
CAGAAAAGGTAGGGCTAAGA+GGG 0.522352 tig0022022:-72816 None:intergenic
CTACATAGATAGACAGATGA+TGG 0.526702 tig0022022:-75228 None:intergenic
GTTATAGTCGTTGTTGGTAA+CGG 0.526884 tig0022022:-70803 None:intergenic
GGAAGTAGCTGTTGATATAA+CGG 0.528442 tig0022022:+72885 Msa1396400:CDS
TGACATCCTGATTCTGGCAT+AGG 0.528630 tig0022022:-74309 None:intergenic
TTTGGATCTTTGGTTTGCAT+AGG 0.529211 tig0022022:-73037 None:intergenic
AACCAAAGATCCAAATGTGC+AGG 0.530641 tig0022022:+73045 Msa1396400:CDS
GCAATTTCAAAACTTGCTCA+AGG 0.530918 tig0022022:+74383 Msa1396400:CDS
AACCGGATCAGGATCGATCA+TGG 0.537059 tig0022022:-75099 None:intergenic
CGAACAACTGTACATTCAGA+TGG 0.538277 tig0022022:+73754 Msa1396400:CDS
GAGGCCTTCTGCCAGAGAGT+TGG 0.541203 tig0022022:+75124 Msa1396400:CDS
GGTTACCATGAGAACATTGT+GGG 0.544802 tig0022022:+73707 Msa1396400:intron
TGGTGACCATCAACAAGTTG+TGG 0.545627 tig0022022:+72837 Msa1396400:CDS
GGGAAAGGTCCTTTAAATAG+GGG 0.547532 tig0022022:-72999 None:intergenic
TAGACAGATGATGGTCCAGC+AGG 0.554155 tig0022022:-75219 None:intergenic
ACCGATGCTGATTCAAGAGA+TGG 0.558070 tig0022022:+70899 Msa1396400:CDS
GTTGATATAACGGTAGCTGC+TGG 0.559132 tig0022022:+72895 Msa1396400:CDS
AAACCCCAAAATCAAGGGGA+AGG 0.559167 tig0022022:+70702 Msa1396400:CDS
ACGCAGTACACAGTTACAGC+TGG 0.560665 tig0022022:+73455 Msa1396400:CDS
AAATAGGGGTTACTAAAGCA+AGG 0.563788 tig0022022:-72985 None:intergenic
TAGCCCTTGCCCTAAATCCC+CGG 0.565880 tig0022022:+71217 Msa1396400:CDS
AATAGCCCACAATGTTCTCA+TGG 0.571060 tig0022022:-73712 None:intergenic
AGAAAATATCAACCTTGTCA+AGG 0.580681 tig0022022:-74248 None:intergenic
TGAAATTGCAATGAATGACC+AGG 0.582007 tig0022022:-74369 None:intergenic
AGTAGCCTTCCGATTGAGGA+AGG 0.582590 tig0022022:+74177 Msa1396400:CDS
AATGAATGACCAGGCAGGAG+TGG 0.584677 tig0022022:-74360 None:intergenic
AGATGCACGTTATATGCCCC+AGG 0.587833 tig0022022:+74200 Msa1396400:CDS
GATTTGTCTCTGAATCGAGA+AGG 0.588616 tig0022022:-70844 None:intergenic
CTTATCAGCAAATTGGTCGA+GGG 0.596939 tig0022022:+73373 Msa1396400:intron
AGGTTACCATGAGAACATTG+TGG 0.597160 tig0022022:+73706 Msa1396400:intron
ACTTGTCATAGATGGTGTCT+CGG 0.597463 tig0022022:+72789 Msa1396400:intron
GATGGTCACCAGAAAAGGTA+GGG 0.598031 tig0022022:-72825 None:intergenic
TCTACCAACTCTCTGGCAGA+AGG 0.598894 tig0022022:-75128 None:intergenic
TACTCCAGATTACATAACTC+CGG 0.599238 tig0022022:+71047 Msa1396400:CDS
TGATGGTCACCAGAAAAGGT+AGG 0.601997 tig0022022:-72826 None:intergenic
ATCGAGAAGGTTCTGGAAGG+CGG 0.606702 tig0022022:-70831 None:intergenic
CACCTGATAATTCTCGCGCA+TGG 0.607613 tig0022022:+75308 Msa1396400:three_prime_UTR
CATCTCCTTCCTCAATCGGA+AGG 0.611201 tig0022022:-74182 None:intergenic
TCTCCGGGGATTTAGGGCAA+GGG 0.611486 tig0022022:-71220 None:intergenic
GCCATCTCTTGAATCAGCAT+CGG 0.612326 tig0022022:-70900 None:intergenic
GGGTTACTAAAGCAAGGAGG+AGG 0.617439 tig0022022:-72979 None:intergenic
AAGGAGAAAAGCTTTGATGG+AGG 0.617943 tig0022022:+73559 Msa1396400:intron
AGTTACAGCTGGATACAGAA+AGG 0.621788 tig0022022:+73466 Msa1396400:CDS
TTGTCCTTCTGCTAATAACT+CGG 0.621799 tig0022022:-73813 None:intergenic
CATAGCTTATCTGTAAACAA+AGG 0.622293 tig0022022:+73788 Msa1396400:CDS
ATTGCAATGAATGACCAGGC+AGG 0.623023 tig0022022:-74365 None:intergenic
AAATATCAACCTTGTCAAGG+TGG 0.623552 tig0022022:-74245 None:intergenic
TGGTAAGGACTCTGTTGCAG+AGG 0.626891 tig0022022:+72864 Msa1396400:CDS
GGCTCCGAGTTATTAGCAGA+AGG 0.627136 tig0022022:+73809 Msa1396400:CDS
TGCAAGTTCTGTATTTGCAA+TGG 0.627920 tig0022022:+75331 Msa1396400:three_prime_UTR
GGAAGGAAGAAGGCACCACT+CGG 0.629021 tig0022022:+70719 Msa1396400:CDS
GAATTATGACCACCTTGACA+AGG 0.636957 tig0022022:+74236 Msa1396400:CDS
TCATTGGTAACCCTAATGGA+AGG 0.639494 tig0022022:-70872 None:intergenic
TTCTCATTAAGGATTTCCTG+GGG 0.641683 tig0022022:-74216 None:intergenic
AAAAGCAAAAGATGTCGACT+GGG 0.647827 tig0022022:+71257 Msa1396400:CDS
GTCTTTCTCTACCCAACTGG+AGG 0.652542 tig0022022:-75459 None:intergenic
TGAATCGAGAAGGTTCTGGA+AGG 0.655355 tig0022022:-70834 None:intergenic
GATCAGTGTCGATTGTGTCA+TGG 0.668665 tig0022022:+75250 Msa1396400:three_prime_UTR
GGTAGCTGCTGGTAAGCCGA+AGG 0.673285 tig0022022:+72906 Msa1396400:CDS
ACATAACTCCGGATAATCAG+CGG 0.676793 tig0022022:+71058 Msa1396400:CDS
ACTGCGATTTATACACGACA+AGG 0.681658 tig0022022:+74062 Msa1396400:CDS
CTTGTGTTACTCGCACCGAG+TGG 0.719837 tig0022022:-70734 None:intergenic
CTGCGATTTATACACGACAA+GGG 0.720865 tig0022022:+74063 Msa1396400:CDS
AGTAGTATTCAATTTCTCCG+GGG 0.726721 tig0022022:-71234 None:intergenic
TAGGGGTTACTAAAGCAAGG+AGG 0.776403 tig0022022:-72982 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGTATTTATAAATAGTAAAA+TGG + tig0022022:71430-71449 Msa1396400:intron 10.0%
!!! ATTTATATTTTGTTTTGATT+TGG + tig0022022:74016-74035 Msa1396400:intron 10.0%
!!! TTTTTTACATAAATATTATC+AGG - tig0022022:74111-74130 None:intergenic 10.0%
!! GATAATATTTATGTAAAAAA+TGG + tig0022022:74111-74130 Msa1396400:CDS 10.0%
!!! ATTTTTAAATCTTTGAATCT+TGG - tig0022022:70674-70693 None:intergenic 15.0%
!! ATTTACTAATTTGAAAAACT+GGG + tig0022022:71453-71472 Msa1396400:intron 15.0%
!! GAAAATTAACTTAAAAAACA+TGG - tig0022022:72565-72584 None:intergenic 15.0%
!! ATGGACTTAAAATATATTAA+TGG + tig0022022:75382-75401 Msa1396400:three_prime_UTR 15.0%
!! GATTTACTAATTTGAAAAAC+TGG + tig0022022:71452-71471 Msa1396400:intron 20.0%
!!! AAGTTAATTTTCAACATATC+TGG + tig0022022:72573-72592 Msa1396400:intron 20.0%
!!! ATAAAATTCCTTTTGAAACA+TGG - tig0022022:73279-73298 None:intergenic 20.0%
!!! TTATGGTTTTCTCTTATTTA+AGG + tig0022022:73612-73631 Msa1396400:intron 20.0%
!! AATTATGTAAAAAGTTATGC+AGG - tig0022022:73986-74005 None:intergenic 20.0%
!!! TTTGTTTTGATTTGGAAATT+TGG + tig0022022:74024-74043 Msa1396400:intron 20.0%
!!! CATTTTTTGAATCTTAAAGA+AGG + tig0022022:74330-74349 Msa1396400:CDS 20.0%
!! TTAAAATATGTAAGCTACTA+TGG + tig0022022:74598-74617 Msa1396400:intron 20.0%
!! TTAAAATATGTAAGCTACTA+TGG + tig0022022:74598-74617 Msa1396400:intron 20.0%
!!! TGATGTTTTGATATTTATTC+AGG + tig0022022:75076-75095 Msa1396400:intron 20.0%
! AAATCAAAATCCTTCCATTA+GGG + tig0022022:70862-70881 Msa1396400:CDS 25.0%
! TCAATTTCGGAAAATGAAAA+GGG - tig0022022:70966-70985 None:intergenic 25.0%
! TTAGTAGTATTCAATTTCTC+CGG - tig0022022:71239-71258 None:intergenic 25.0%
!! AGACATTTTTCATGCAAATT+TGG - tig0022022:71640-71659 None:intergenic 25.0%
! TGTCTACAAAGTCATAAATT+GGG - tig0022022:71959-71978 None:intergenic 25.0%
! TTGTCTACAAAGTCATAAAT+TGG - tig0022022:71960-71979 None:intergenic 25.0%
! TTTATGACTTTGTAGACAAT+TGG + tig0022022:71961-71980 Msa1396400:intron 25.0%
! TTATGACTTTGTAGACAATT+GGG + tig0022022:71962-71981 Msa1396400:intron 25.0%
!!! TAGAAAAGTTGGTAGAAAAT+AGG + tig0022022:72220-72239 Msa1396400:intron 25.0%
!! TTTTCTAATGGTTTCTCTAA+TGG - tig0022022:72355-72374 None:intergenic 25.0%
! AACCATTAGAAAAGATTTAG+AGG + tig0022022:72362-72381 Msa1396400:intron 25.0%
! TGTACAAACAATTAAGCTAT+AGG - tig0022022:72537-72556 None:intergenic 25.0%
! AACATATCTGGTTAAATTGT+AGG + tig0022022:72585-72604 Msa1396400:intron 25.0%
! AATGGGTAAATAAATAGCAT+TGG - tig0022022:72750-72769 None:intergenic 25.0%
! ACCATTATACAGTTAGAAAA+TGG - tig0022022:73175-73194 None:intergenic 25.0%
! CATCATAAGCTGTAAATTTA+GGG - tig0022022:73215-73234 None:intergenic 25.0%
! CTAAATTTACAGCTTATGAT+GGG + tig0022022:73214-73233 Msa1396400:CDS 25.0%
!! AAAGTATTAAAGCGAATAGA+TGG + tig0022022:73414-73433 Msa1396400:CDS 25.0%
! ACTGTTATGTAGATTTGATT+TGG + tig0022022:73874-73893 Msa1396400:intron 25.0%
!!! AAGGTTGATATTTTCTCTTT+GGG + tig0022022:74255-74274 Msa1396400:CDS 25.0%
! AATGAACTATGATTCTATTG+TGG + tig0022022:74551-74570 Msa1396400:intron 25.0%
! AATGAACTATGATTCTATTG+TGG + tig0022022:74551-74570 Msa1396400:intron 25.0%
! ATAAAACATGAGTTGTAAAC+AGG - tig0022022:74896-74915 None:intergenic 25.0%
TTATTCTTCATCTTCTTCAC+TGG + tig0022022:70640-70659 Msa1396400:five_prime_UTR 30.0%
CAAATCAAAATCCTTCCATT+AGG + tig0022022:70861-70880 Msa1396400:CDS 30.0%
TTCTTAGTCAAGATTTCTTC+TGG + tig0022022:70924-70943 Msa1396400:CDS 30.0%
CTCAATTTCGGAAAATGAAA+AGG - tig0022022:70967-70986 None:intergenic 30.0%
! AAATGGAATCGACTCAATTT+CGG - tig0022022:70979-70998 None:intergenic 30.0%
!!! ATTGAGTCGATTCCATTTTT+TGG + tig0022022:70981-71000 Msa1396400:intron 30.0%
CAAACTTCGAAACCAAAAAA+TGG - tig0022022:70996-71015 None:intergenic 30.0%
TAGTAGTATTCAATTTCTCC+GGG - tig0022022:71238-71257 None:intergenic 30.0%
GATGACATACTTCTTGAATA+TGG - tig0022022:71729-71748 None:intergenic 30.0%
AGAATAATCCGATGATTTCA+GGG - tig0022022:71861-71880 None:intergenic 30.0%
TAGAATAATCCGATGATTTC+AGG - tig0022022:71862-71881 None:intergenic 30.0%
GGACTAAACATATGTTCTAT+CGG + tig0022022:72022-72041 Msa1396400:intron 30.0%
! TCTACCAACTTTTCTACTAT+AGG - tig0022022:72216-72235 None:intergenic 30.0%
! GTTTCTCTAATGGTTTTCTT+AGG - tig0022022:72345-72364 None:intergenic 30.0%
! GACCTCTAAATCTTTTCTAA+TGG - tig0022022:72367-72386 None:intergenic 30.0%
GTTCTATCAAAGACCATATT+TGG - tig0022022:72402-72421 None:intergenic 30.0%
TGGTCTTTGATAGAACATTA+TGG + tig0022022:72406-72425 Msa1396400:intron 30.0%
ACTAAACATATCTAACTGGA+GGG + tig0022022:72506-72525 Msa1396400:intron 30.0%
TTATACATTCCATGCTACAT+AGG + tig0022022:72667-72686 Msa1396400:intron 30.0%
! GCATGTTGATTAGAGAAAAT+GGG - tig0022022:72767-72786 None:intergenic 30.0%
! TGCATGTTGATTAGAGAAAA+TGG - tig0022022:72768-72787 None:intergenic 30.0%
CTTTAGTAACCCCTATTTAA+AGG + tig0022022:72990-73009 Msa1396400:CDS 30.0%
! ACTTTTCCACCATTAATGAA+CGG - tig0022022:73101-73120 None:intergenic 30.0%
!! GCCATTTTCTAACTGTATAA+TGG + tig0022022:73171-73190 Msa1396400:intron 30.0%
CCATCATAAGCTGTAAATTT+AGG - tig0022022:73216-73235 None:intergenic 30.0%
CCTAAATTTACAGCTTATGA+TGG + tig0022022:73213-73232 Msa1396400:CDS 30.0%
!! TGTTGAGAACTGTTTTGAAT+TGG + tig0022022:73300-73319 Msa1396400:intron 30.0%
TACTTCTCTTATCAGCAAAT+TGG + tig0022022:73366-73385 Msa1396400:intron 30.0%
! AAGGTATCATCTTCATACTA+CGG + tig0022022:73485-73504 Msa1396400:intron 30.0%
!! AGCATTGGGTTTGTATTTTA+TGG + tig0022022:73595-73614 Msa1396400:intron 30.0%
!! ATTTAAGGTTCAAGCATTGA+TGG + tig0022022:73627-73646 Msa1396400:intron 30.0%
GTTTATCATCTTACCTCTAT+AGG + tig0022022:73686-73705 Msa1396400:intron 30.0%
CATAGCTTATCTGTAAACAA+AGG + tig0022022:73788-73807 Msa1396400:CDS 30.0%
ACTATAGATTAAGGAAACCA+TGG - tig0022022:73960-73979 None:intergenic 30.0%
TGCAGGTTTACTATAGATTA+AGG - tig0022022:73969-73988 None:intergenic 30.0%
!! TTTGATTTGGAAATTTGGAC+AGG + tig0022022:74029-74048 Msa1396400:intron 30.0%
AAAAATGGTGTCTATAAGCT+TGG + tig0022022:74126-74145 Msa1396400:CDS 30.0%
ATTCTCATTAAGGATTTCCT+GGG - tig0022022:74220-74239 None:intergenic 30.0%
AATTCTCATTAAGGATTTCC+TGG - tig0022022:74221-74240 None:intergenic 30.0%
AGAAAATATCAACCTTGTCA+AGG - tig0022022:74251-74270 None:intergenic 30.0%
!!! CAAGGTTGATATTTTCTCTT+TGG + tig0022022:74254-74273 Msa1396400:CDS 30.0%
AAAAAATGACATCCTGATTC+TGG - tig0022022:74318-74337 None:intergenic 30.0%
! TCAATTTTTCGCTGTTCTTA+AGG - tig0022022:75174-75193 None:intergenic 30.0%
CCAAAAGACATTCACAAAAT+TGG - tig0022022:75276-75295 None:intergenic 30.0%
! CCAATTTTGTGAATGTCTTT+TGG + tig0022022:75273-75292 Msa1396400:three_prime_UTR 30.0%
GAGAAAAACCCCAAAATCAA+GGG + tig0022022:70697-70716 Msa1396400:CDS 35.0%
AGAAAAACCCCAAAATCAAG+GGG + tig0022022:70698-70717 Msa1396400:CDS 35.0%
! GTTATAGTCGTTGTTGGTAA+CGG - tig0022022:70806-70825 None:intergenic 35.0%
GAAGAAGTTATAGTCGTTGT+TGG - tig0022022:70812-70831 None:intergenic 35.0%
TACTCCAGATTACATAACTC+CGG + tig0022022:71047-71066 Msa1396400:CDS 35.0%
TTATCCGGAGTTATGTAATC+TGG - tig0022022:71054-71073 None:intergenic 35.0%
! TTCAAAATCCGCTGATTATC+CGG - tig0022022:71069-71088 None:intergenic 35.0%
!! GATAATCAGCGGATTTTGAA+CGG + tig0022022:71069-71088 Msa1396400:CDS 35.0%
!! GAACGGTATCGATTTCAATA+AGG + tig0022022:71086-71105 Msa1396400:CDS 35.0%
!! GGTATCGATTTCAATAAGGT+GGG + tig0022022:71090-71109 Msa1396400:intron 35.0%
!! GTATCGATTTCAATAAGGTG+GGG + tig0022022:71091-71110 Msa1396400:intron 35.0%
AGTAGTATTCAATTTCTCCG+GGG - tig0022022:71237-71256 None:intergenic 35.0%
TAAAAGCAAAAGATGTCGAC+TGG + tig0022022:71256-71275 Msa1396400:CDS 35.0%
! AAAAGCAAAAGATGTCGACT+GGG + tig0022022:71257-71276 Msa1396400:CDS 35.0%
TACATGTGCATACACAAACA+CGG - tig0022022:71414-71433 None:intergenic 35.0%
GGATGTCTCATCAAGTTTAT+GGG + tig0022022:71474-71493 Msa1396400:intron 35.0%
GGATTGTGAACATATGTTGA+TGG + tig0022022:71574-71593 Msa1396400:intron 35.0%
GCATGAAAAATGTCTACTCA+TGG + tig0022022:71645-71664 Msa1396400:intron 35.0%
AGTATGTCATCTATGAAGCA+CGG + tig0022022:71738-71757 Msa1396400:intron 35.0%
CATGTCGTATCCAATACTTA+TGG - tig0022022:71767-71786 None:intergenic 35.0%
GAAGCACAGATACTCAAAAA+TGG - tig0022022:71820-71839 None:intergenic 35.0%
AATAATCCGATGATTTCAGG+GGG - tig0022022:71859-71878 None:intergenic 35.0%
GAATAATCCGATGATTTCAG+GGG - tig0022022:71860-71879 None:intergenic 35.0%
TATCCCCATTATGCACAATT+GGG - tig0022022:71899-71918 None:intergenic 35.0%
ATATCCCCATTATGCACAAT+TGG - tig0022022:71900-71919 None:intergenic 35.0%
ACGTTGAAACTAGAAATGAC+AGG - tig0022022:71930-71949 None:intergenic 35.0%
CAGACACCTTTCATAAAAAG+GGG - tig0022022:72003-72022 None:intergenic 35.0%
CCAGACACCTTTCATAAAAA+GGG - tig0022022:72004-72023 None:intergenic 35.0%
TCCAGACACCTTTCATAAAA+AGG - tig0022022:72005-72024 None:intergenic 35.0%
AGACTAGACATGATAGGATT+AGG + tig0022022:72157-72176 Msa1396400:intron 35.0%
AGCACCTATAGTAGAAAAGT+TGG + tig0022022:72209-72228 Msa1396400:intron 35.0%
TGGTAGAAAATAGGCTTAGA+TGG + tig0022022:72229-72248 Msa1396400:intron 35.0%
GAAAATAGGCTTAGATGGTT+TGG + tig0022022:72234-72253 Msa1396400:intron 35.0%
TTGATCTACTCTTCTTACCA+CGG - tig0022022:72286-72305 None:intergenic 35.0%
GGTAAGAAGAGTAGATCAAA+TGG + tig0022022:72287-72306 Msa1396400:intron 35.0%
AAGAAGAGTAGATCAAATGG+AGG + tig0022022:72290-72309 Msa1396400:intron 35.0%
AGTCAAGTTAAAAGAGGTAG+AGG + tig0022022:72315-72334 Msa1396400:intron 35.0%
AGATTTAGAGGTCAATGAGT+TGG + tig0022022:72374-72393 Msa1396400:intron 35.0%
! CAATGAGTTGGATCCAAATA+TGG + tig0022022:72386-72405 Msa1396400:intron 35.0%
! TTGTTGTTGTTGTTGTTGTC+TGG + tig0022022:72483-72502 Msa1396400:intron 35.0%
CTGGACTAAACATATCTAAC+TGG + tig0022022:72502-72521 Msa1396400:intron 35.0%
GACTAAACATATCTAACTGG+AGG + tig0022022:72505-72524 Msa1396400:intron 35.0%
! CACTAATTTTTCCATGTGGT+GGG - tig0022022:72702-72721 None:intergenic 35.0%
ACATGCATACTTGTCATAGA+TGG + tig0022022:72781-72800 Msa1396400:intron 35.0%
GGAAGTAGCTGTTGATATAA+CGG + tig0022022:72885-72904 Msa1396400:CDS 35.0%
AGAATGTGACACATAGTTCT+GGG - tig0022022:72932-72951 None:intergenic 35.0%
AAATAGGGGTTACTAAAGCA+AGG - tig0022022:72988-73007 None:intergenic 35.0%
TGGGAAAGGTCCTTTAAATA+GGG - tig0022022:73003-73022 None:intergenic 35.0%
TTGGGAAAGGTCCTTTAAAT+AGG - tig0022022:73004-73023 None:intergenic 35.0%
TTTAAAGGACCTTTCCCAAA+AGG + tig0022022:73005-73024 Msa1396400:CDS 35.0%
!! TTGGATCTTTGGTTTGCATA+GGG - tig0022022:73039-73058 None:intergenic 35.0%
!! TTTGGATCTTTGGTTTGCAT+AGG - tig0022022:73040-73059 None:intergenic 35.0%
AATGAACGGGATACTTGTAA+AGG - tig0022022:73087-73106 None:intergenic 35.0%
ACAAGTATCCCGTTCATTAA+TGG + tig0022022:73089-73108 Msa1396400:intron 35.0%
! CTTTTCCACCATTAATGAAC+GGG - tig0022022:73100-73119 None:intergenic 35.0%
CTGTATAATGGTATGACTGT+AGG + tig0022022:73183-73202 Msa1396400:intron 35.0%
! TTGAGGTACCATGTTTCAAA+AGG + tig0022022:73268-73287 Msa1396400:intron 35.0%
CTCCTTCAATCACAGAATAT+CGG - tig0022022:73545-73564 None:intergenic 35.0%
! TTGAAGGAGAAAAGCTTTGA+TGG + tig0022022:73556-73575 Msa1396400:intron 35.0%
! TTGTGGGCTATTATACTTCA+TGG + tig0022022:73723-73742 Msa1396400:CDS 35.0%
TTGTCCTTCTGCTAATAACT+CGG - tig0022022:73816-73835 None:intergenic 35.0%
ATCTACATAACAGTCAGACA+AGG - tig0022022:73868-73887 None:intergenic 35.0%
!! GTCTATAAGCTTGGTGATTT+TGG + tig0022022:74135-74154 Msa1396400:CDS 35.0%
TTCTCATTAAGGATTTCCTG+GGG - tig0022022:74219-74238 None:intergenic 35.0%
GGTGGTCATAATTCTCATTA+AGG - tig0022022:74230-74249 None:intergenic 35.0%
AAATATCAACCTTGTCAAGG+TGG - tig0022022:74248-74267 None:intergenic 35.0%
! ATTCTGGCATAGGTGATTTT+CGG - tig0022022:74302-74321 None:intergenic 35.0%
TGAAATTGCAATGAATGACC+AGG - tig0022022:74372-74391 None:intergenic 35.0%
! GCAATTTCAAAACTTGCTCA+AGG + tig0022022:74383-74402 Msa1396400:CDS 35.0%
CGACTAATAAATCCAATGTG+TGG + tig0022022:74479-74498 Msa1396400:intron 35.0%
!!! TTTTGAGATGTAGTACAGCA+TGG - tig0022022:74740-74759 None:intergenic 35.0%
TAAACAGGTATAGCAATCCA+TGG - tig0022022:74881-74900 None:intergenic 35.0%
AAAGTGAAAAACAAGTGTGG+TGG - tig0022022:75198-75217 None:intergenic 35.0%
GGAAAAGTGAAAAACAAGTG+TGG - tig0022022:75201-75220 None:intergenic 35.0%
!! TTGTTTTTCACTTTTCCTGC+TGG + tig0022022:75204-75223 Msa1396400:three_prime_UTR 35.0%
CTACATAGATAGACAGATGA+TGG - tig0022022:75231-75250 None:intergenic 35.0%
TGCAAGTTCTGTATTTGCAA+TGG + tig0022022:75331-75350 Msa1396400:three_prime_UTR 35.0%
GTGTCTGTTGTACATTGTAA+TGG + tig0022022:75363-75382 Msa1396400:three_prime_UTR 35.0%
AAACAACAGGCAAACATTTC+TGG - tig0022022:75434-75453 None:intergenic 35.0%
!!! TTGTTTTTTCACCTCCAGTT+GGG + tig0022022:75448-75467 Msa1396400:three_prime_UTR 35.0%
CGAGAAAAACCCCAAAATCA+AGG + tig0022022:70696-70715 Msa1396400:CDS 40.0%
! TCTTCCTTCCCCTTGATTTT+GGG - tig0022022:70709-70728 None:intergenic 40.0%
! TTCTTCCTTCCCCTTGATTT+TGG - tig0022022:70710-70729 None:intergenic 40.0%
AAAATCAAGGGGAAGGAAGA+AGG + tig0022022:70709-70728 Msa1396400:CDS 40.0%
GATTTGTCTCTGAATCGAGA+AGG - tig0022022:70847-70866 None:intergenic 40.0%
! TCATTGGTAACCCTAATGGA+AGG - tig0022022:70875-70894 None:intergenic 40.0%
! AGCATCATTGGTAACCCTAA+TGG - tig0022022:70879-70898 None:intergenic 40.0%
ACATAACTCCGGATAATCAG+CGG + tig0022022:71058-71077 Msa1396400:CDS 40.0%
!! CGGTATCGATTTCAATAAGG+TGG + tig0022022:71089-71108 Msa1396400:intron 40.0%
TGTAATGTAATGTGTTCCGC+AGG + tig0022022:71190-71209 Msa1396400:intron 40.0%
TCAATTTCTCCGGGGATTTA+GGG - tig0022022:71229-71248 None:intergenic 40.0%
TTCAATTTCTCCGGGGATTT+AGG - tig0022022:71230-71249 None:intergenic 40.0%
GGGATGTCTCATCAAGTTTA+TGG + tig0022022:71473-71492 Msa1396400:intron 40.0%
CGACATGTATGAGTGCATAT+CGG + tig0022022:71780-71799 Msa1396400:intron 40.0%
GACATGTATGAGTGCATATC+GGG + tig0022022:71781-71800 Msa1396400:intron 40.0%
ACTCAAAAATGGCTTCTGAG+TGG - tig0022022:71809-71828 None:intergenic 40.0%
ACCTCCCAATTGTGCATAAT+GGG + tig0022022:71892-71911 Msa1396400:intron 40.0%
! CTCTAGCCCCTTTTTATGAA+AGG + tig0022022:71994-72013 Msa1396400:intron 40.0%
!!! CCCTTTTTATGAAAGGTGTC+TGG + tig0022022:72001-72020 Msa1396400:intron 40.0%
GTGGTAAGACTAGACATGAT+AGG + tig0022022:72151-72170 Msa1396400:intron 40.0%
TGACATCATTAGAGAGAGAG+TGG + tig0022022:72182-72201 Msa1396400:intron 40.0%
GACATCATTAGAGAGAGAGT+GGG + tig0022022:72183-72202 Msa1396400:intron 40.0%
ACATCATTAGAGAGAGAGTG+GGG + tig0022022:72184-72203 Msa1396400:intron 40.0%
GAGGAGAGTCAAGTTAAAAG+AGG + tig0022022:72309-72328 Msa1396400:intron 40.0%
!! TTTTCCATGTGGTGGGAAAT+GGG - tig0022022:72695-72714 None:intergenic 40.0%
!! TTTTTCCATGTGGTGGGAAA+TGG - tig0022022:72696-72715 None:intergenic 40.0%
! GCACTAATTTTTCCATGTGG+TGG - tig0022022:72703-72722 None:intergenic 40.0%
! GCAGCACTAATTTTTCCATG+TGG - tig0022022:72706-72725 None:intergenic 40.0%
ACTTGTCATAGATGGTGTCT+CGG + tig0022022:72789-72808 Msa1396400:intron 40.0%
!! TTGTTGATGGTCACCAGAAA+AGG - tig0022022:72833-72852 None:intergenic 40.0%
!! CAAGTTCCACAACTTGTTGA+TGG - tig0022022:72846-72865 None:intergenic 40.0%
CATCAACAAGTTGTGGAACT+TGG + tig0022022:72844-72863 Msa1396400:CDS 40.0%
ACAAGTTGTGGAACTTGGTA+AGG + tig0022022:72849-72868 Msa1396400:CDS 40.0%
CAGAATGTGACACATAGTTC+TGG - tig0022022:72933-72952 None:intergenic 40.0%
GGGAAAGGTCCTTTAAATAG+GGG - tig0022022:73002-73021 None:intergenic 40.0%
! ATAGGGATCTGTCTCCTTTT+GGG - tig0022022:73022-73041 None:intergenic 40.0%
AACCAAAGATCCAAATGTGC+AGG + tig0022022:73045-73064 Msa1396400:CDS 40.0%
TACCTGCACATTTGGATCTT+TGG - tig0022022:73050-73069 None:intergenic 40.0%
TAGAGTGATACCTGCACATT+TGG - tig0022022:73058-73077 None:intergenic 40.0%
AGTATCCCGTTCATTAATGG+TGG + tig0022022:73092-73111 Msa1396400:intron 40.0%
GGTGGAAAAGTCATTGTAAC+TGG + tig0022022:73110-73129 Msa1396400:intron 40.0%
!! CACTGACTTTCATGAGATTG+AGG + tig0022022:73251-73270 Msa1396400:CDS 40.0%
CATGAAGTTGAATGCGATGA+AGG - tig0022022:73331-73350 None:intergenic 40.0%
CTTCATCGCATTCAACTTCA+TGG + tig0022022:73329-73348 Msa1396400:intron 40.0%
TCTTATCAGCAAATTGGTCG+AGG + tig0022022:73372-73391 Msa1396400:intron 40.0%
CTTATCAGCAAATTGGTCGA+GGG + tig0022022:73373-73392 Msa1396400:intron 40.0%
AGTTACAGCTGGATACAGAA+AGG + tig0022022:73466-73485 Msa1396400:CDS 40.0%
! ACGGAGACTTCTTCTTTTCT+TGG + tig0022022:73504-73523 Msa1396400:intron 40.0%
! CGGAGACTTCTTCTTTTCTT+GGG + tig0022022:73505-73524 Msa1396400:intron 40.0%
!! TCACAGAATATCGGTGTTAG+TGG - tig0022022:73536-73555 None:intergenic 40.0%
CACCGATATTCTGTGATTGA+AGG + tig0022022:73540-73559 Msa1396400:intron 40.0%
! AAGGAGAAAAGCTTTGATGG+AGG + tig0022022:73559-73578 Msa1396400:intron 40.0%
GTTCTCATGGTAACCTATAG+AGG - tig0022022:73702-73721 None:intergenic 40.0%
AGGTTACCATGAGAACATTG+TGG + tig0022022:73706-73725 Msa1396400:intron 40.0%
GGTTACCATGAGAACATTGT+GGG + tig0022022:73707-73726 Msa1396400:intron 40.0%
AATAGCCCACAATGTTCTCA+TGG - tig0022022:73715-73734 None:intergenic 40.0%
CGAACAACTGTACATTCAGA+TGG + tig0022022:73754-73773 Msa1396400:CDS 40.0%
ACTGCGATTTATACACGACA+AGG + tig0022022:74062-74081 Msa1396400:CDS 40.0%
CTGCGATTTATACACGACAA+GGG + tig0022022:74063-74082 Msa1396400:CDS 40.0%
GAATTATGACCACCTTGACA+AGG + tig0022022:74236-74255 Msa1396400:CDS 40.0%
AAATCACCTATGCCAGAATC+AGG + tig0022022:74303-74322 Msa1396400:CDS 40.0%
CAAGTCTACAAACCACACAT+TGG - tig0022022:74494-74513 None:intergenic 40.0%
! TGTGTGGTTTGTAGACTTGT+AGG + tig0022022:74495-74514 Msa1396400:intron 40.0%
!!! CAGAATTTTCTGAAGCACCA+TGG + tig0022022:74861-74880 Msa1396400:intron 40.0%
! GAACGATGCTACTTACTACT+TGG - tig0022022:74974-74993 None:intergenic 40.0%
! TAGAGAACCCAATTTTCGAC+AGG + tig0022022:75147-75166 Msa1396400:CDS 40.0%
! AGAGAACCCAATTTTCGACA+GGG + tig0022022:75148-75167 Msa1396400:CDS 40.0%
TTAAGGCCCTGTCGAAAATT+GGG - tig0022022:75157-75176 None:intergenic 40.0%
GTATTTGCAATGGTCCAGTT+AGG + tig0022022:75341-75360 Msa1396400:three_prime_UTR 40.0%
ATGTACAACAGACACCTAAC+TGG - tig0022022:75358-75377 None:intergenic 40.0%
ACTGGAGGTGAAAAAACAAC+AGG - tig0022022:75447-75466 None:intergenic 40.0%
!!! GTTGTTTTTTCACCTCCAGT+TGG + tig0022022:75447-75466 Msa1396400:three_prime_UTR 40.0%
AAACCCCAAAATCAAGGGGA+AGG + tig0022022:70702-70721 Msa1396400:CDS 45.0%
! CTTCCTTCCCCTTGATTTTG+GGG - tig0022022:70708-70727 None:intergenic 45.0%
!! TGAATCGAGAAGGTTCTGGA+AGG - tig0022022:70837-70856 None:intergenic 45.0%
TCTCTGAATCGAGAAGGTTC+TGG - tig0022022:70841-70860 None:intergenic 45.0%
!! ATCAGCATCGGTAGCATCAT+TGG - tig0022022:70891-70910 None:intergenic 45.0%
!! ACCGATGCTGATTCAAGAGA+TGG + tig0022022:70899-70918 Msa1396400:CDS 45.0%
GCCATCTCTTGAATCAGCAT+CGG - tig0022022:70903-70922 None:intergenic 45.0%
GCATGTAGTGCGAATCAGTA+TGG + tig0022022:71553-71572 Msa1396400:intron 45.0%
GCAGTCTCTTCTAAGTGGTA+GGG - tig0022022:71678-71697 None:intergenic 45.0%
TGCAGTCTCTTCTAAGTGGT+AGG - tig0022022:71679-71698 None:intergenic 45.0%
TACCACTTAGAAGAGACTGC+AGG + tig0022022:71678-71697 Msa1396400:intron 45.0%
ACCACTTAGAAGAGACTGCA+GGG + tig0022022:71679-71698 Msa1396400:intron 45.0%
AGCACGGACACCATAAGTAT+TGG + tig0022022:71754-71773 Msa1396400:intron 45.0%
ATCACTCCCCCTGAAATCAT+CGG + tig0022022:71850-71869 Msa1396400:intron 45.0%
GACCTCCCAATTGTGCATAA+TGG + tig0022022:71891-71910 Msa1396400:intron 45.0%
CCTCCCAATTGTGCATAATG+GGG + tig0022022:71893-71912 Msa1396400:intron 45.0%
ACCGGCAATGTTGTATGGTA+CGG + tig0022022:72056-72075 Msa1396400:intron 45.0%
TCCGTACCATACAACATTGC+CGG - tig0022022:72060-72079 None:intergenic 45.0%
TGTTGTATGGTACGGAGTGT+TGG + tig0022022:72064-72083 Msa1396400:intron 45.0%
! GTTGTATGGTACGGAGTGTT+GGG + tig0022022:72065-72084 Msa1396400:intron 45.0%
CGCTTACTTTACTCTCGTGT+TGG - tig0022022:72101-72120 None:intergenic 45.0%
CGAGAGTAAAGTAAGCGTAG+CGG + tig0022022:72104-72123 Msa1396400:intron 45.0%
CATCATTAGAGAGAGAGTGG+GGG + tig0022022:72185-72204 Msa1396400:intron 45.0%
AAATGGGAGCCTATGTAGCA+TGG - tig0022022:72679-72698 None:intergenic 45.0%
CAGAAAAGGTAGGGCTAAGA+GGG - tig0022022:72819-72838 None:intergenic 45.0%
GATGGTCACCAGAAAAGGTA+GGG - tig0022022:72828-72847 None:intergenic 45.0%
TGATGGTCACCAGAAAAGGT+AGG - tig0022022:72829-72848 None:intergenic 45.0%
TGGTGACCATCAACAAGTTG+TGG + tig0022022:72837-72856 Msa1396400:CDS 45.0%
GTTGATATAACGGTAGCTGC+TGG + tig0022022:72895-72914 Msa1396400:CDS 45.0%
TAGGGGTTACTAAAGCAAGG+AGG - tig0022022:72985-73004 None:intergenic 45.0%
!! GATCTGTCTCCTTTTGGGAA+AGG - tig0022022:73017-73036 None:intergenic 45.0%
! CATAGGGATCTGTCTCCTTT+TGG - tig0022022:73023-73042 None:intergenic 45.0%
TTTGATGGAGGTTCAAGCTC+TGG + tig0022022:73571-73590 Msa1396400:CDS 45.0%
!! GGTTCAAGCATTGATGGAGT+AGG + tig0022022:73633-73652 Msa1396400:intron 45.0%
GGAAACCATGGCAAAAACGA+TGG - tig0022022:73948-73967 None:intergenic 45.0%
TGATAGTAGCCTTCCGATTG+AGG + tig0022022:74173-74192 Msa1396400:CDS 45.0%
TGACATCCTGATTCTGGCAT+AGG - tig0022022:74312-74331 None:intergenic 45.0%
ATTGCAATGAATGACCAGGC+AGG - tig0022022:74368-74387 None:intergenic 45.0%
! GTGGTTTGTAGACTTGTAGG+AGG + tig0022022:74498-74517 Msa1396400:intron 45.0%
CTTAAGGCCCTGTCGAAAAT+TGG - tig0022022:75158-75177 None:intergenic 45.0%
!! GATCAGTGTCGATTGTGTCA+TGG + tig0022022:75250-75269 Msa1396400:three_prime_UTR 45.0%
!! ATCGAGAAGGTTCTGGAAGG+CGG - tig0022022:70834-70853 None:intergenic 50.0%
ACCCTGCAGTCTCTTCTAAG+TGG - tig0022022:71683-71702 None:intergenic 50.0%
ATGCACAATTGGGAGGTCAC+TGG - tig0022022:71889-71908 None:intergenic 50.0%
CCCCATTATGCACAATTGGG+AGG - tig0022022:71896-71915 None:intergenic 50.0%
GTCAGACCGGCAATGTTGTA+TGG + tig0022022:72051-72070 Msa1396400:intron 50.0%
! AAGTAAGCGTAGCGGAGATG+AGG + tig0022022:72112-72131 Msa1396400:intron 50.0%
AGGATGTTGCGTTGGATGAG+TGG + tig0022022:72132-72151 Msa1396400:intron 50.0%
TCTTCTTACCACGGCGTCTA+CGG - tig0022022:72277-72296 None:intergenic 50.0%
CTTATCCCACTAAGTGGGGT+CGG - tig0022022:72451-72470 None:intergenic 50.0%
! GAGCCTTATCCCACTAAGTG+GGG - tig0022022:72455-72474 None:intergenic 50.0%
! CGAGCCTTATCCCACTAAGT+GGG - tig0022022:72456-72475 None:intergenic 50.0%
CCACTTAGTGGGATAAGGCT+CGG + tig0022022:72454-72473 Msa1396400:intron 50.0%
CCAGAAAAGGTAGGGCTAAG+AGG - tig0022022:72820-72839 None:intergenic 50.0%
! CCTCTTAGCCCTACCTTTTC+TGG + tig0022022:72817-72836 Msa1396400:CDS 50.0%
TGGTAAGGACTCTGTTGCAG+AGG + tig0022022:72864-72883 Msa1396400:CDS 50.0%
!! GACACATAGTTCTGGGCCTT+CGG - tig0022022:72925-72944 None:intergenic 50.0%
TGCAGCTACATTGCGTTGCA+GGG + tig0022022:72951-72970 Msa1396400:CDS 50.0%
GGGTTACTAAAGCAAGGAGG+AGG - tig0022022:72982-73001 None:intergenic 50.0%
ACGCAGTACACAGTTACAGC+TGG + tig0022022:73455-73474 Msa1396400:CDS 50.0%
! GTTCAAGCTCTGGCAGCATT+GGG + tig0022022:73581-73600 Msa1396400:CDS 50.0%
GGCTCCGAGTTATTAGCAGA+AGG + tig0022022:73809-73828 Msa1396400:CDS 50.0%
!! GTCGTCCATCGTTTTTGCCA+TGG + tig0022022:73940-73959 Msa1396400:intron 50.0%
AGTAGCCTTCCGATTGAGGA+AGG + tig0022022:74177-74196 Msa1396400:CDS 50.0%
CATCTCCTTCCTCAATCGGA+AGG - tig0022022:74185-74204 None:intergenic 50.0%
CGTGCATCTCCTTCCTCAAT+CGG - tig0022022:74189-74208 None:intergenic 50.0%
AGATGCACGTTATATGCCCC+AGG + tig0022022:74200-74219 Msa1396400:CDS 50.0%
AATGAATGACCAGGCAGGAG+TGG - tig0022022:74363-74382 None:intergenic 50.0%
AACCGGATCAGGATCGATCA+TGG - tig0022022:75102-75121 None:intergenic 50.0%
TCGATCCTGATCCGGTTAAG+AGG + tig0022022:75105-75124 Msa1396400:CDS 50.0%
TCTACCAACTCTCTGGCAGA+AGG - tig0022022:75131-75150 None:intergenic 50.0%
TGGGTTCTCTACCAACTCTC+TGG - tig0022022:75138-75157 None:intergenic 50.0%
! TAGACAGATGATGGTCCAGC+AGG - tig0022022:75222-75241 None:intergenic 50.0%
CACCTGATAATTCTCGCGCA+TGG + tig0022022:75308-75327 Msa1396400:three_prime_UTR 50.0%
CACCATGCGCGAGAATTATC+AGG - tig0022022:75313-75332 None:intergenic 50.0%
GTCTTTCTCTACCCAACTGG+AGG - tig0022022:75462-75481 None:intergenic 50.0%
!! GGAAGGAAGAAGGCACCACT+CGG + tig0022022:70719-70738 Msa1396400:CDS 55.0%
! CTTGTGTTACTCGCACCGAG+TGG - tig0022022:70737-70756 None:intergenic 55.0%
GGGCAAGGGCTATTATCCTG+CGG - tig0022022:71209-71228 None:intergenic 55.0%
TAGCCCTTGCCCTAAATCCC+CGG + tig0022022:71217-71236 Msa1396400:CDS 55.0%
! TCTCCGGGGATTTAGGGCAA+GGG - tig0022022:71223-71242 None:intergenic 55.0%
! TTCTCCGGGGATTTAGGGCA+AGG - tig0022022:71224-71243 None:intergenic 55.0%
CTATCGGACAGCAGTCAGAC+CGG + tig0022022:72038-72057 Msa1396400:intron 55.0%
!! GTATGGTACGGAGTGTTGGG+CGG + tig0022022:72068-72087 Msa1396400:intron 55.0%
CGGAGATGAGGATGTTGCGT+TGG + tig0022022:72124-72143 Msa1396400:intron 55.0%
CTTCTTACCACGGCGTCTAC+GGG - tig0022022:72276-72295 None:intergenic 55.0%
ACTAAGTGGGGTCGGCTACA+TGG - tig0022022:72443-72462 None:intergenic 55.0%
ATGTAGCCGACCCCACTTAG+TGG + tig0022022:72442-72461 Msa1396400:intron 55.0%
TGTAGCCGACCCCACTTAGT+GGG + tig0022022:72443-72462 Msa1396400:intron 55.0%
CGACCCCACTTAGTGGGATA+AGG + tig0022022:72449-72468 Msa1396400:intron 55.0%
! CCGAGCCTTATCCCACTAAG+TGG - tig0022022:72457-72476 None:intergenic 55.0%
CTGCAGCTACATTGCGTTGC+AGG + tig0022022:72950-72969 Msa1396400:CDS 55.0%
! GGTTCAAGCTCTGGCAGCAT+TGG + tig0022022:73580-73599 Msa1396400:CDS 55.0%
GGCCATGATCGATCCTGATC+CGG + tig0022022:75097-75116 Msa1396400:intron 55.0%
GAAGGCCTCTTAACCGGATC+AGG - tig0022022:75113-75132 None:intergenic 55.0%
CTGGCAGAAGGCCTCTTAAC+CGG - tig0022022:75119-75138 None:intergenic 55.0%
GGCTCCCATTTCCCACCACA+TGG + tig0022022:72688-72707 Msa1396400:intron 60.0%
GGTAGCTGCTGGTAAGCCGA+AGG + tig0022022:72906-72925 Msa1396400:CDS 60.0%
GAGGCCTTCTGCCAGAGAGT+TGG + tig0022022:75124-75143 Msa1396400:CDS 60.0%
GAGAAGACCCGTAGACGCCG+TGG + tig0022022:72266-72285 Msa1396400:intron 65.0%
GGCAAGTTGCCACTCCTGCC+TGG + tig0022022:74351-74370 Msa1396400:CDS 65.0%
Chromosome Type Strat End Strand Name
tig0022022 gene 70620 75481 70620 ID=Msa1396400;Name=Msa1396400
tig0022022 mRNA 70620 75481 70620 ID=Msa1396400-mRNA-1;Parent=Msa1396400;Name=Msa1396400-mRNA-1;_AED=0.12;_eAED=0.12;_QI=72|1|1|1|1|1|10|288|487
tig0022022 exon 70620 70945 70620 ID=Msa1396400-mRNA-1:exon:15450;Parent=Msa1396400-mRNA-1
tig0022022 exon 71047 71107 71047 ID=Msa1396400-mRNA-1:exon:15451;Parent=Msa1396400-mRNA-1
tig0022022 exon 71212 71278 71212 ID=Msa1396400-mRNA-1:exon:15452;Parent=Msa1396400-mRNA-1
tig0022022 exon 72800 73066 72800 ID=Msa1396400-mRNA-1:exon:15453;Parent=Msa1396400-mRNA-1
tig0022022 exon 73205 73272 73205 ID=Msa1396400-mRNA-1:exon:15454;Parent=Msa1396400-mRNA-1
tig0022022 exon 73381 73487 73381 ID=Msa1396400-mRNA-1:exon:15455;Parent=Msa1396400-mRNA-1
tig0022022 exon 73562 73602 73562 ID=Msa1396400-mRNA-1:exon:15456;Parent=Msa1396400-mRNA-1
tig0022022 exon 73708 73856 73708 ID=Msa1396400-mRNA-1:exon:15457;Parent=Msa1396400-mRNA-1
tig0022022 exon 74051 74404 74051 ID=Msa1396400-mRNA-1:exon:15458;Parent=Msa1396400-mRNA-1
tig0022022 exon 75098 75481 75098 ID=Msa1396400-mRNA-1:exon:15459;Parent=Msa1396400-mRNA-1
tig0022022 five_prime_UTR 70620 70691 70620 ID=Msa1396400-mRNA-1:five_prime_utr;Parent=Msa1396400-mRNA-1
tig0022022 CDS 70692 70945 70692 ID=Msa1396400-mRNA-1:cds;Parent=Msa1396400-mRNA-1
tig0022022 CDS 71047 71107 71047 ID=Msa1396400-mRNA-1:cds;Parent=Msa1396400-mRNA-1
tig0022022 CDS 71212 71278 71212 ID=Msa1396400-mRNA-1:cds;Parent=Msa1396400-mRNA-1
tig0022022 CDS 72800 73066 72800 ID=Msa1396400-mRNA-1:cds;Parent=Msa1396400-mRNA-1
tig0022022 CDS 73205 73272 73205 ID=Msa1396400-mRNA-1:cds;Parent=Msa1396400-mRNA-1
tig0022022 CDS 73381 73487 73381 ID=Msa1396400-mRNA-1:cds;Parent=Msa1396400-mRNA-1
tig0022022 CDS 73562 73602 73562 ID=Msa1396400-mRNA-1:cds;Parent=Msa1396400-mRNA-1
tig0022022 CDS 73708 73856 73708 ID=Msa1396400-mRNA-1:cds;Parent=Msa1396400-mRNA-1
tig0022022 CDS 74051 74404 74051 ID=Msa1396400-mRNA-1:cds;Parent=Msa1396400-mRNA-1
tig0022022 CDS 75098 75193 75098 ID=Msa1396400-mRNA-1:cds;Parent=Msa1396400-mRNA-1
tig0022022 three_prime_UTR 75194 75481 75194 ID=Msa1396400-mRNA-1:three_prime_utr;Parent=Msa1396400-mRNA-1
Gene Sequence

>Msa1396400

ATGACGAGAAAAACCCCAAAATCAAGGGGAAGGAAGAAGGCACCACTCGGTGCGAGTAACACAAGACAGTTACAGCTTCAGCTCAGCAAATTCTCTTTCAAACAATACAAACCGTTACCAACAACGACTATAACTTCTTCCGCCTTCCAGAACCTTCTCGATTCAGAGACAAATCAAAATCCTTCCATTAGGGTTACCAATGATGCTACCGATGCTGATTCAAGAGATGGCATTCTTAGTCAAGATTTCTTCTGTACTCCAGATTACATAACTCCGGATAATCAGCGGATTTTGAACGGTATCGATTTCAATAAGGATAATAGCCCTTGCCCTAAATCCCCGGAGAAATTGAATACTACTAAAAGCAAAAGATGTCGACTGGATGGTGTCTCGGCAAACCCTCTTAGCCCTACCTTTTCTGGTGACCATCAACAAGTTGTGGAACTTGGTAAGGACTCTGTTGCAGAGGAAGTAGCTGTTGATATAACGGTAGCTGCTGGTAAGCCGAAGGCCCAGAACTATGTGTCACATTCTGCAGCTACATTGCGTTGCAGGGCTATACCTCCTCCTTGCTTTAGTAACCCCTATTTAAAGGACCTTTCCCAAAAGGAGACAGATCCCTATGCAAACCAAAGATCCAAATGTGCAGGTTTCTTCCCTAAATTTACAGCTTATGATGGGCTCTCACGCTATCGCACTGACTTTCATGAGATTGAGCAAATTGGTCGAGGGTACTTTAGTTGTGTTTTTAAAGTATTAAAGCGAATAGATGGCTGCTTGTATGCTGTGAAACGCAGTACACAGTTACAGCTGGATACAGAAAGGAGAAAAGCTTTGATGGAGGTTCAAGCTCTGGCAGCATTGGGTTACCATGAGAACATTGTGGGCTATTATACTTCATGGTTTGAAAACGAACAACTGTACATTCAGATGGAGATATGTGATCATAGCTTATCTGTAAACAAAGGCTCCGAGTTATTAGCAGAAGGACAAGTGTTAGAAGTTTTATATCAAGTTGCTAATGCACTGCGATTTATACACGACAAGGGAATAGCTCATCTTGATCTTAAACCTGATAATATTTATGTAAAAAATGGTGTCTATAAGCTTGGTGATTTTGGATGTGCAACTCTTACTGATAGTAGCCTTCCGATTGAGGAAGGAGATGCACGTTATATGCCCCAGGAAATCCTTAATGAGAATTATGACCACCTTGACAAGGTTGATATTTTCTCTTTGGGAGTTTCTATTTATCAACTCATCCGAAAATCACCTATGCCAGAATCAGGATGTCATTTTTTGAATCTTAAAGAAGGCAAGTTGCCACTCCTGCCTGGTCATTCATTGCAATTTCAAAACTTGCTCAAGGCCATGATCGATCCTGATCCGGTTAAGAGGCCTTCTGCCAGAGAGTTGGTAGAGAACCCAATTTTCGACAGGGCCTTAAGAACAGCGAAAAATTGA

Protein sequence

>Msa1396400

MTRKTPKSRGRKKAPLGASNTRQLQLQLSKFSFKQYKPLPTTTITSSAFQNLLDSETNQNPSIRVTNDATDADSRDGILSQDFFCTPDYITPDNQRILNGIDFNKDNSPCPKSPEKLNTTKSKRCRLDGVSANPLSPTFSGDHQQVVELGKDSVAEEVAVDITVAAGKPKAQNYVSHSAATLRCRAIPPPCFSNPYLKDLSQKETDPYANQRSKCAGFFPKFTAYDGLSRYRTDFHEIEQIGRGYFSCVFKVLKRIDGCLYAVKRSTQLQLDTERRKALMEVQALAALGYHENIVGYYTSWFENEQLYIQMEICDHSLSVNKGSELLAEGQVLEVLYQVANALRFIHDKGIAHLDLKPDNIYVKNGVYKLGDFGCATLTDSSLPIEEGDARYMPQEILNENYDHLDKVDIFSLGVSIYQLIRKSPMPESGCHFLNLKEGKLPLLPGHSLQFQNLLKAMIDPDPVKRPSARELVENPIFDRALRTAKN*