AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1166090


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1166090 MtrunA17_Chr7g0269001 97.959 490 7 1 1 487 1 490 0.0 999
Msa1166090 MtrunA17_Chr8g0369451 26.690 281 168 6 235 478 4 283 1.69e-21 97.1
Msa1166090 MtrunA17_Chr5g0409421 26.042 288 171 7 228 478 1 283 2.36e-21 96.7
Msa1166090 MtrunA17_Chr1g0173921 29.730 259 161 12 234 476 3 256 3.85e-20 94.4
Msa1166090 MtrunA17_Chr2g0286501 31.373 255 151 10 235 472 49 296 3.86e-20 94.4
Msa1166090 MtrunA17_Chr8g0386981 32.950 261 148 14 241 481 414 667 1.34e-19 92.4
Msa1166090 MtrunA17_Chr4g0051191 28.682 258 169 10 241 485 169 424 1.39e-19 90.9
Msa1166090 MtrunA17_Chr8g0374701 29.670 273 144 11 239 476 129 388 2.22e-19 91.3
Msa1166090 MtrunA17_Chr1g0157131 27.757 263 155 9 239 476 78 330 2.31e-19 90.9
Msa1166090 MtrunA17_Chr4g0059951 26.648 349 211 12 161 485 11 338 4.00e-19 90.5
Msa1166090 MtrunA17_Chr4g0045261 29.304 273 142 10 239 476 141 397 4.69e-19 90.1
Msa1166090 MtrunA17_Chr7g0260191 30.859 256 160 10 235 476 4 256 5.83e-19 90.1
Msa1166090 MtrunA17_Chr5g0402551 29.930 284 151 13 227 476 125 394 1.39e-18 88.6
Msa1166090 MtrunA17_Chr1g0202831 32.061 262 149 13 241 481 417 670 1.74e-18 89.0
Msa1166090 MtrunA17_Chr7g0258051 30.075 266 161 12 229 476 10 268 5.72e-18 87.0
Msa1166090 MtrunA17_Chr1g0190831 30.859 256 160 11 235 476 4 256 2.49e-17 85.1
Msa1166090 MtrunA17_Chr5g0419441 27.376 263 172 9 233 480 237 495 2.50e-17 85.1
Msa1166090 MtrunA17_Chr6g0479211 28.464 267 166 11 234 478 55 318 2.96e-17 82.8
Msa1166090 MtrunA17_Chr3g0130151 29.167 264 166 11 232 478 241 500 3.82e-17 84.3
Msa1166090 MtrunA17_Chr7g0256001 28.763 299 155 14 227 486 132 411 4.59e-17 84.0
Msa1166090 MtrunA17_Chr5g0402601 26.894 264 171 9 232 475 369 630 1.70e-16 82.4
Msa1166090 MtrunA17_Chr4g0074811 26.996 263 157 10 239 476 95 347 1.97e-16 82.0
Msa1166090 MtrunA17_Chr8g0339221 23.611 288 181 5 238 487 7 293 2.45e-16 81.3
Msa1166090 MtrunA17_Chr7g0274941 31.179 263 160 13 232 476 13 272 2.97e-16 79.3
Msa1166090 MtrunA17_Chr8g0345801 27.488 211 134 7 228 425 8 212 4.72e-16 78.2
Msa1166090 MtrunA17_Chr1g0185221 28.516 256 166 10 235 476 4 256 1.09e-15 79.7
Msa1166090 MtrunA17_Chr1g0205421 27.652 264 162 11 239 482 16 270 1.30e-15 79.0
Msa1166090 MtrunA17_Chr1g0173541 26.568 271 167 10 240 487 57 318 1.32e-15 79.3
Msa1166090 MtrunA17_Chr1g0170551 28.346 254 165 10 235 476 7 255 1.78e-15 79.7
Msa1166090 MtrunA17_Chr2g0321841 29.278 263 158 12 234 476 2 256 4.96e-15 78.2
Msa1166090 MtrunA17_Chr3g0114511 27.509 269 162 9 239 486 36 292 1.49e-14 75.9
Msa1166090 MtrunA17_Chr3g0140631 25.442 283 199 6 204 476 6 286 2.66e-14 73.6
Msa1166090 MtrunA17_Chr1g0190131 28.185 259 170 9 232 476 6 262 7.31e-14 72.0
Msa1166090 MtrunA17_Chr4g0059121 31.126 151 95 5 332 474 161 310 7.79e-14 72.8
Msa1166090 MtrunA17_Chr3g0132591 29.344 259 156 9 234 476 111 358 9.75e-14 73.2
Msa1166090 MtrunA17_Chr2g0310761 24.627 268 170 11 233 473 937 1199 1.00e-13 73.9
Msa1166090 MtrunA17_Chr8g0346081 27.106 273 176 12 230 485 11 277 1.07e-13 73.2
Msa1166090 MtrunA17_Chr2g0310781 23.881 268 170 11 234 473 844 1105 1.46e-13 73.6
Msa1166090 MtrunA17_Chr3g0133541 29.297 256 161 12 241 477 313 567 1.80e-13 72.8
Msa1166090 MtrunA17_Chr8g0357611 24.719 267 169 11 234 473 1369 1630 1.92e-13 73.2
Msa1166090 MtrunA17_Chr3g0102451 27.737 274 173 10 184 436 269 538 2.28e-13 72.4
Msa1166090 MtrunA17_Chr6g0453711 26.721 247 146 11 205 426 74 310 3.82e-13 71.6
Msa1166090 MtrunA17_Chr7g0218071 24.695 328 182 14 211 481 89 408 5.34e-13 71.6
Msa1166090 MtrunA17_Chr4g0061141 27.907 215 141 8 224 426 93 305 6.69e-13 71.2
Msa1166090 MtrunA17_Chr4g0066691 26.908 249 163 9 190 426 63 304 7.94e-13 70.9
Msa1166090 MtrunA17_Chr2g0286421 28.112 249 160 10 190 426 61 302 8.99e-13 70.5
Msa1166090 MtrunA17_Chr5g0441691 24.776 335 199 14 170 476 15 324 1.04e-12 70.1
Msa1166090 MtrunA17_Chr7g0267771 24.254 268 169 9 234 476 86 344 1.06e-12 70.1
Msa1166090 MtrunA17_Chr1g0211611 32.484 157 87 8 332 475 399 549 1.24e-12 70.1
Msa1166090 MtrunA17_Chr1g0196631 25.940 266 165 11 234 472 899 1159 1.57e-12 70.1
Msa1166090 MtrunA17_Chr3g0131861 28.169 213 138 8 226 426 88 297 1.68e-12 69.7
Msa1166090 MtrunA17_Chr8g0384001 26.481 287 162 14 220 476 16 283 1.68e-12 69.7
Msa1166090 MtrunA17_Chr6g0461841 25.746 268 165 11 234 473 966 1227 1.95e-12 70.1
Msa1166090 MtrunA17_Chr2g0305141 25.275 273 166 11 233 475 1081 1345 1.99e-12 70.1
Msa1166090 MtrunA17_Chr5g0396361 29.767 215 137 9 224 426 128 340 2.28e-12 69.3
Msa1166090 MtrunA17_Chr1g0205471 25.784 287 165 13 221 478 13 280 3.04e-12 68.9
Msa1166090 MtrunA17_Chr8g0355131 27.230 213 115 7 291 476 105 304 3.07e-12 68.9
Msa1166090 MtrunA17_Chr1g0197721 25.943 212 125 7 234 421 50 253 4.00e-12 68.2
Msa1166090 MtrunA17_Chr8g0385971 27.358 212 141 7 226 426 81 290 5.25e-12 68.2
Msa1166090 MtrunA17_Chr7g0276111 26.545 275 147 13 239 476 148 404 6.87e-12 67.8
Msa1166090 MtrunA17_Chr7g0273851 25.862 290 157 13 222 485 14 271 8.57e-12 67.8
Msa1166090 MtrunA17_Chr1g0176421 26.259 278 151 14 234 476 159 417 1.70e-11 66.6
Msa1166090 MtrunA17_Chr3g0129771 28.293 205 110 8 239 420 37 227 2.68e-11 65.9
Msa1166090 MtrunA17_Chr5g0432541 24.904 261 165 12 241 478 33 285 2.76e-11 65.9
Msa1166090 MtrunA17_Chr4g0000431 26.471 272 160 11 239 481 28 288 3.53e-11 65.9
Msa1166090 MtrunA17_Chr6g0455931 26.255 259 164 13 241 478 35 287 4.67e-11 65.1
Msa1166090 MtrunA17_Chr5g0397101 25.670 261 159 9 240 475 72 322 4.89e-11 65.1
Msa1166090 MtrunA17_Chr3g0141871 24.088 274 177 10 222 484 19 272 5.74e-11 64.3
Msa1166090 MtrunA17_Chr8g0383451 27.723 202 123 8 241 426 4 198 7.23e-11 64.3
Msa1166090 MtrunA17_Chr4g0074791 24.314 255 173 8 239 475 99 351 7.52e-11 64.3
Msa1166090 MtrunA17_Chr3g0107011 29.279 222 130 10 284 487 64 276 7.67e-11 64.3
Msa1166090 MtrunA17_Chr6g0450571 25.442 283 165 11 234 484 15 283 7.90e-11 64.7
Msa1166090 MtrunA17_Chr3g0099951 24.752 202 142 5 239 431 18 218 8.81e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1166090 AT1G02970.1 59.138 487 187 6 2 480 15 497 0.0 589
Msa1166090 AT4G19110.1 26.978 278 165 6 238 478 7 283 5.44e-23 102
Msa1166090 AT4G19110.2 26.978 278 165 6 238 478 7 283 5.61e-23 102
Msa1166090 AT5G45430.2 26.619 278 166 6 238 478 7 283 1.15e-20 95.1
Msa1166090 AT5G45430.1 26.619 278 166 6 238 478 7 283 1.23e-20 95.1
Msa1166090 AT3G20860.1 29.851 268 170 11 234 487 3 266 3.48e-20 93.2
Msa1166090 AT1G49580.1 30.961 281 148 12 239 487 154 420 8.58e-20 92.8
Msa1166090 AT3G19100.1 30.000 270 144 11 239 476 148 404 1.47e-19 92.4
Msa1166090 AT1G76040.2 29.434 265 156 11 234 476 113 368 1.93e-19 91.7
Msa1166090 AT1G76040.3 29.434 265 156 11 234 476 113 368 2.04e-19 91.3
Msa1166090 AT1G08650.1 29.278 263 167 7 239 484 19 279 1.41e-18 86.3
Msa1166090 AT3G12200.1 27.612 268 177 9 234 487 18 282 5.08e-18 87.4
Msa1166090 AT4G19110.3 28.000 225 125 5 291 478 3 227 1.19e-17 85.5
Msa1166090 AT3G63280.2 30.078 256 162 11 235 476 4 256 2.33e-17 85.1
Msa1166090 AT3G63280.3 30.078 256 162 11 235 476 4 256 2.33e-17 85.1
Msa1166090 AT3G63280.1 30.078 256 162 11 235 476 4 256 2.33e-17 85.1
Msa1166090 AT3G50530.1 29.371 286 150 13 227 476 139 408 2.54e-17 85.5
Msa1166090 AT3G63280.4 30.078 256 162 11 235 476 58 310 4.51e-17 84.7
Msa1166090 AT4G12020.3 27.675 271 162 11 225 482 1616 1865 8.78e-17 84.3
Msa1166090 AT4G12020.10 27.675 271 162 11 225 482 1608 1857 9.09e-17 84.3
Msa1166090 AT1G08650.2 29.200 250 158 7 239 471 19 266 1.68e-16 80.1
Msa1166090 AT4G13020.7 25.424 295 178 8 228 485 1 290 2.03e-16 81.3
Msa1166090 AT4G13020.4 25.424 295 178 8 228 485 1 290 2.28e-16 81.3
Msa1166090 AT4G13020.1 25.424 295 178 8 228 485 1 290 2.30e-16 81.6
Msa1166090 AT4G13020.6 25.424 295 178 8 228 485 1 290 2.33e-16 81.3
Msa1166090 AT4G08470.1 27.413 259 171 10 233 477 301 556 2.80e-16 82.0
Msa1166090 AT4G04700.1 26.996 263 161 10 239 476 32 288 3.18e-16 81.6
Msa1166090 AT4G13020.2 25.424 295 178 8 228 485 9 298 3.55e-16 81.3
Msa1166090 AT4G13020.3 25.424 295 178 8 228 485 9 298 3.57e-16 81.3
Msa1166090 AT1G18890.1 28.571 266 157 10 240 481 68 324 3.97e-16 81.3
Msa1166090 AT5G28290.1 28.405 257 169 9 235 478 4 258 4.13e-16 81.3
Msa1166090 AT5G28290.2 28.405 257 169 9 235 478 4 258 4.13e-16 81.3
Msa1166090 AT5G28290.3 28.405 257 169 9 235 478 4 258 4.65e-16 81.3
Msa1166090 AT1G69220.1 27.376 263 172 9 233 480 247 505 4.96e-16 81.6
Msa1166090 AT4G04710.2 25.391 256 168 7 239 476 40 290 5.79e-16 80.9
Msa1166090 AT3G12200.2 26.619 278 177 10 234 487 18 292 6.14e-16 80.9
Msa1166090 AT3G10540.1 25.095 263 162 9 234 469 44 298 6.70e-16 80.5
Msa1166090 AT4G04710.4 25.188 266 169 7 239 476 40 303 9.65e-16 80.1
Msa1166090 AT1G50240.3 30.040 253 164 10 234 476 5 254 1.03e-15 80.9
Msa1166090 AT1G50240.2 30.040 253 164 10 234 476 5 254 1.03e-15 80.9
Msa1166090 AT4G04710.1 25.188 266 169 7 239 476 40 303 1.05e-15 80.1
Msa1166090 AT1G54510.4 29.545 264 166 11 238 483 7 268 1.20e-15 80.1
Msa1166090 AT1G54510.2 29.545 264 166 11 238 483 7 268 1.20e-15 80.1
Msa1166090 AT1G54510.1 29.545 264 166 11 238 483 7 268 1.20e-15 80.1
Msa1166090 AT1G54510.3 29.545 264 166 11 238 483 7 268 1.20e-15 80.1
Msa1166090 AT4G21940.3 26.054 261 162 10 239 476 106 358 1.26e-15 79.7
Msa1166090 AT4G21940.2 26.054 261 162 10 239 476 106 358 1.55e-15 79.7
Msa1166090 AT3G21220.2 24.345 267 178 9 233 481 68 328 1.76e-15 78.2
Msa1166090 AT3G21220.1 24.345 267 178 9 233 481 68 328 1.76e-15 78.2
Msa1166090 AT4G29810.1 26.119 268 175 11 233 480 68 332 1.77e-15 78.2
Msa1166090 AT4G21940.1 26.054 261 162 10 239 476 106 358 1.88e-15 79.3
Msa1166090 AT4G29810.2 26.119 268 175 11 233 480 77 341 1.90e-15 78.2
Msa1166090 AT1G12680.1 28.679 265 156 11 241 484 113 365 2.30e-15 79.0
Msa1166090 AT5G12480.1 24.308 325 200 12 178 475 9 314 2.94e-15 78.6
Msa1166090 AT5G04510.2 24.715 263 163 9 234 469 43 297 3.29e-15 77.8
Msa1166090 AT5G04510.1 24.715 263 163 9 234 469 43 297 3.67e-15 78.2
Msa1166090 AT3G15220.1 26.236 263 181 7 235 486 15 275 5.94e-15 78.2
Msa1166090 AT5G66850.2 26.616 263 171 9 241 483 352 612 8.32e-15 77.4
Msa1166090 AT5G66850.1 26.616 263 171 9 241 483 352 612 9.39e-15 77.4
Msa1166090 AT1G12580.1 26.568 271 156 10 239 480 48 304 1.04e-14 77.0
Msa1166090 AT5G19450.2 26.415 265 164 9 240 481 62 318 1.26e-14 76.6
Msa1166090 AT5G19450.1 26.415 265 164 9 240 481 62 318 1.26e-14 76.6
Msa1166090 AT4G04695.1 25.843 267 159 10 239 476 32 288 1.55e-14 76.3
Msa1166090 AT4G13020.5 23.607 305 180 10 228 485 1 299 1.88e-14 75.9
Msa1166090 AT4G13020.8 23.607 305 180 10 228 485 1 299 2.47e-14 75.1
Msa1166090 AT2G45490.1 25.000 256 176 6 233 476 20 271 2.83e-14 73.9
Msa1166090 AT1G69220.2 27.626 257 167 9 239 480 226 478 3.58e-14 75.9
Msa1166090 AT1G30270.1 27.885 208 137 7 291 486 88 294 5.63e-14 74.3
Msa1166090 AT1G30270.2 27.885 208 137 7 291 486 88 294 5.73e-14 74.3
Msa1166090 AT3G49370.1 29.885 174 93 6 264 421 180 340 1.41e-13 73.6
Msa1166090 AT1G30270.3 30.588 170 107 6 327 486 29 197 1.53e-13 72.8
Msa1166090 AT2G25880.1 26.070 257 172 7 233 476 23 274 1.59e-13 71.6
Msa1166090 AT2G25880.4 26.070 257 172 7 233 476 36 287 1.61e-13 71.6
Msa1166090 AT3G57530.2 25.455 275 165 12 240 487 68 329 2.03e-13 72.4
Msa1166090 AT4G29810.3 26.054 261 170 11 233 473 77 334 2.55e-13 71.6
Msa1166090 AT1G01140.3 25.275 273 181 9 229 483 12 279 4.25e-13 71.6
Msa1166090 AT3G57530.1 25.455 275 165 12 240 487 68 329 4.37e-13 72.0
Msa1166090 AT1G01140.1 25.275 273 181 9 229 483 12 279 4.38e-13 71.6
Msa1166090 AT1G23700.2 28.889 270 164 13 234 484 15 275 4.43e-13 71.2
Msa1166090 AT5G50860.1 28.365 208 136 7 230 426 109 314 4.48e-13 72.0
Msa1166090 AT1G79570.2 25.180 278 173 13 225 473 953 1224 5.52e-13 72.0
Msa1166090 AT1G79570.1 25.180 278 173 13 225 473 953 1224 5.52e-13 72.0
Msa1166090 AT4G36070.1 28.000 200 116 6 241 421 77 267 5.75e-13 71.6
Msa1166090 AT5G50860.2 28.365 208 136 7 230 426 109 314 5.87e-13 71.2
Msa1166090 AT1G23700.3 28.889 270 164 13 234 484 15 275 6.41e-13 71.2
Msa1166090 AT1G23700.1 28.889 270 164 13 234 484 15 275 7.13e-13 70.9
Msa1166090 AT5G58350.1 27.586 261 162 14 239 478 23 277 7.18e-13 71.2
Msa1166090 AT4G36070.2 28.000 200 116 6 241 421 77 267 7.92e-13 71.2
Msa1166090 AT1G49160.2 28.155 206 111 8 239 421 32 223 9.63e-13 70.9
Msa1166090 AT1G54610.1 26.693 251 165 9 188 426 75 318 1.12e-12 70.9
Msa1166090 AT1G54610.3 26.693 251 165 9 188 426 75 318 1.12e-12 70.9
Msa1166090 AT1G54610.2 26.693 251 165 9 188 426 75 318 1.12e-12 70.9
Msa1166090 AT3G50730.1 25.856 263 170 9 232 472 33 292 1.36e-12 69.7
Msa1166090 AT2G38910.1 25.228 329 182 14 188 476 86 390 1.45e-12 70.5
Msa1166090 AT5G04510.3 25.943 212 125 7 234 421 43 246 1.69e-12 68.6
Msa1166090 AT4G04740.4 25.620 242 149 10 258 476 92 325 2.08e-12 69.7
Msa1166090 AT4G04740.6 25.620 242 149 10 258 476 92 325 2.08e-12 69.7
Msa1166090 AT4G04740.5 25.620 242 149 10 258 476 92 325 2.08e-12 69.7
Msa1166090 AT4G04740.3 25.620 242 149 10 258 476 92 325 2.08e-12 69.7
Msa1166090 AT4G04740.1 25.620 242 149 10 258 476 92 325 2.08e-12 69.7
Msa1166090 AT4G04740.7 25.620 242 149 10 258 476 92 325 2.08e-12 69.7
Msa1166090 AT3G23000.1 25.893 224 148 7 277 486 69 288 2.10e-12 69.3
Msa1166090 AT2G26980.1 26.540 211 138 6 284 480 64 271 2.45e-12 68.9
Msa1166090 AT1G16270.1 24.719 267 169 11 234 473 862 1123 2.49e-12 70.1
Msa1166090 AT1G16270.2 24.719 267 169 11 234 473 862 1123 2.49e-12 70.1
Msa1166090 AT1G16270.3 24.719 267 169 11 234 473 862 1123 2.49e-12 70.1
Msa1166090 AT2G26980.5 26.540 211 138 6 284 480 64 271 2.61e-12 68.9
Msa1166090 AT5G24360.1 28.044 271 140 11 257 478 480 744 2.79e-12 69.7
Msa1166090 AT5G24360.2 28.044 271 140 11 257 478 486 750 2.95e-12 69.7
Msa1166090 AT4G04740.2 25.620 242 149 10 258 476 92 325 3.03e-12 69.3
Msa1166090 AT5G24360.3 28.044 271 140 11 257 478 466 730 3.36e-12 69.7
Msa1166090 AT2G26980.3 26.540 211 138 6 284 480 64 271 4.03e-12 68.6
Msa1166090 AT2G26980.4 26.540 211 138 6 284 480 74 281 4.12e-12 68.6
Msa1166090 AT3G07980.1 27.068 266 170 11 239 485 24 284 4.28e-12 69.3
Msa1166090 AT3G07980.2 27.068 266 170 11 239 485 24 284 4.77e-12 69.3
Msa1166090 AT5G12180.1 26.692 266 154 12 239 476 77 329 5.57e-12 68.6
Msa1166090 AT2G35050.1 24.286 280 169 12 234 484 973 1238 5.99e-12 68.9
Msa1166090 AT2G35050.2 24.286 280 169 12 234 484 973 1238 5.99e-12 68.9
Msa1166090 AT1G59580.2 24.272 309 170 12 222 476 19 317 6.16e-12 67.8
Msa1166090 AT1G59580.1 24.272 309 170 12 222 476 19 317 6.16e-12 67.8
Msa1166090 AT4G26890.1 29.070 172 109 8 316 479 88 254 7.44e-12 67.8
Msa1166090 AT5G19360.1 25.191 262 163 10 239 476 72 324 1.01e-11 67.4
Msa1166090 AT3G10660.2 25.180 278 169 11 228 476 175 442 1.22e-11 67.4
Msa1166090 AT3G10660.1 25.180 278 169 11 228 476 175 442 1.22e-11 67.4
Msa1166090 AT4G10010.2 26.522 230 148 9 215 426 130 356 1.23e-11 67.4
Msa1166090 AT3G53930.2 24.345 267 180 8 230 478 15 277 1.51e-11 67.4
Msa1166090 AT3G12200.4 26.570 207 137 7 294 487 12 216 1.56e-11 67.0
Msa1166090 AT3G45640.1 28.251 223 139 9 221 426 20 238 1.59e-11 66.2
Msa1166090 AT1G04700.1 24.535 269 171 11 233 474 764 1027 1.62e-11 67.4
Msa1166090 AT1G04700.2 24.535 269 171 11 233 474 764 1027 1.62e-11 67.4
Msa1166090 AT3G53930.1 24.345 267 180 8 230 478 15 277 1.63e-11 67.4
Msa1166090 AT5G23580.1 24.809 262 160 10 241 476 28 278 1.65e-11 66.6
Msa1166090 AT3G22420.3 25.573 262 140 11 239 474 99 331 1.84e-11 67.0
Msa1166090 AT3G22420.4 25.573 262 140 11 239 474 99 331 1.94e-11 67.0
Msa1166090 AT3G22420.1 25.573 262 140 11 239 474 28 260 2.18e-11 66.6
Msa1166090 AT3G22420.5 25.573 262 140 11 239 474 28 260 2.46e-11 66.6
Msa1166090 AT2G35890.2 24.138 261 165 9 240 476 137 388 2.51e-11 66.2
Msa1166090 AT2G35890.1 24.138 261 165 9 240 476 137 388 2.51e-11 66.2
Msa1166090 AT1G71530.2 27.273 209 137 8 230 426 142 347 2.55e-11 66.2
Msa1166090 AT1G53570.5 25.097 259 153 10 241 485 220 451 2.55e-11 66.2
Msa1166090 AT1G71530.1 27.094 203 135 7 235 426 147 347 3.79e-11 65.9
Msa1166090 AT5G14720.1 25.000 276 169 10 234 481 15 280 3.92e-11 65.9
Msa1166090 AT5G14720.2 25.000 276 169 10 234 481 15 280 3.92e-11 65.9
Msa1166090 AT1G71530.4 26.606 218 145 8 230 435 142 356 4.23e-11 65.1
Msa1166090 AT5G39420.1 29.064 203 131 8 235 426 105 305 4.27e-11 65.9
Msa1166090 AT1G54960.1 27.692 260 161 10 241 477 74 329 4.37e-11 65.9
Msa1166090 AT1G54960.2 27.692 260 161 10 241 477 74 329 4.37e-11 65.9
Msa1166090 AT1G53050.2 27.092 251 147 11 215 448 108 339 4.42e-11 65.9
Msa1166090 AT1G53050.1 27.092 251 147 11 215 448 108 339 4.42e-11 65.9
Msa1166090 AT4G24100.1 24.911 281 171 10 227 478 25 294 4.44e-11 65.9
Msa1166090 AT4G30960.1 26.389 216 131 9 291 487 81 287 4.54e-11 65.1
Msa1166090 AT5G10930.1 25.581 258 160 9 241 476 18 265 4.55e-11 65.1
Msa1166090 AT4G24100.2 24.911 281 171 10 227 478 25 294 5.07e-11 65.5
Msa1166090 AT4G24100.4 24.911 281 171 10 227 478 41 310 5.21e-11 65.5
Msa1166090 AT4G24100.3 24.911 281 171 10 227 478 41 310 5.60e-11 65.5
Msa1166090 AT4G08470.2 31.333 150 95 5 233 376 301 448 5.73e-11 65.1
Msa1166090 AT1G71530.3 27.273 209 137 8 230 426 142 347 5.80e-11 65.1
Msa1166090 AT1G35670.1 24.345 267 177 9 230 476 21 282 6.48e-11 65.1
Msa1166090 AT3G59790.1 28.141 199 132 7 238 426 63 260 6.58e-11 64.7
Msa1166090 AT4G23650.1 27.203 261 157 11 240 476 83 334 6.71e-11 65.1
Msa1166090 AT1G48260.1 29.208 202 125 9 281 468 59 256 7.66e-11 64.7
Msa1166090 AT5G55090.1 26.012 173 117 7 316 480 89 258 9.72e-11 64.3
Msa1166090 AT1G74330.3 28.440 218 138 9 224 426 109 323 9.72e-11 64.7

Find 139 sgRNAs with CRISPR-Local

Find 339 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTTCCTTCCCCTTGATTT+TGG 0.064851 7_4:-58094992 None:intergenic
GTCTATAAGCTTGGTGATTT+TGG 0.139018 7_4:+58098408 Msa1166090:CDS
TTCAATTTCTCCGGGGATTT+AGG 0.142730 7_4:-58095512 None:intergenic
CCATCATAAGCTGTAAATTT+AGG 0.146319 7_4:-58097486 None:intergenic
CTTAAGGCCCTGTCGAAAAT+TGG 0.161314 7_4:-58099428 None:intergenic
AAACAACAGGCAAACATTTC+TGG 0.179440 7_4:-58099704 None:intergenic
CATAGGGATCTGTCTCCTTT+TGG 0.182775 7_4:-58097293 None:intergenic
CTTTAGTAACCCCTATTTAA+AGG 0.192157 7_4:+58097263 Msa1166090:CDS
TTGGGAAAGGTCCTTTAAAT+AGG 0.227358 7_4:-58097274 None:intergenic
TACCTGCACATTTGGATCTT+TGG 0.232933 7_4:-58097320 None:intergenic
CTGCAGCTACATTGCGTTGC+AGG 0.263739 7_4:+58097223 Msa1166090:CDS
CCAAAAGACATTCACAAAAT+TGG 0.268877 7_4:-58099546 None:intergenic
GGTGGTCATAATTCTCATTA+AGG 0.271396 7_4:-58098500 None:intergenic
TCAATTTCTCCGGGGATTTA+GGG 0.297218 7_4:-58095511 None:intergenic
TACTTCTCTTATCAGCAAAT+TGG 0.305098 7_4:+58097639 Msa1166090:intron
TTCAAAATCCGCTGATTATC+CGG 0.313101 7_4:-58095351 None:intergenic
CAAATCAAAATCCTTCCATT+AGG 0.314586 7_4:+58095146 Msa1166090:CDS
AATTCTCATTAAGGATTTCC+TGG 0.316106 7_4:-58098491 None:intergenic
ATGGACTTAAAATATATTAA+TGG 0.316976 7_4:+58099655 Msa1166090:three_prime_UTR
TGGGAAAGGTCCTTTAAATA+GGG 0.319625 7_4:-58097273 None:intergenic
TTCTTAGTCAAGATTTCTTC+TGG 0.320527 7_4:+58095209 Msa1166090:CDS
GAACGGTATCGATTTCAATA+AGG 0.332586 7_4:+58095371 Msa1166090:CDS
TTGTGGGCTATTATACTTCA+TGG 0.333207 7_4:+58097996 Msa1166090:CDS
CATCATAAGCTGTAAATTTA+GGG 0.350243 7_4:-58097485 None:intergenic
TAGAGTGATACCTGCACATT+TGG 0.356447 7_4:-58097328 None:intergenic
CACCATGCGCGAGAATTATC+AGG 0.356776 7_4:-58099583 None:intergenic
CAGAATGTGACACATAGTTC+TGG 0.366945 7_4:-58097203 None:intergenic
CAAGTTCCACAACTTGTTGA+TGG 0.375134 7_4:-58097116 None:intergenic
TCTCTGAATCGAGAAGGTTC+TGG 0.376382 7_4:-58095123 None:intergenic
AAATCAAAATCCTTCCATTA+GGG 0.376468 7_4:+58095147 Msa1166090:CDS
TTGAAGGAGAAAAGCTTTGA+TGG 0.378377 7_4:+58097829 Msa1166090:intron
AAAGTATTAAAGCGAATAGA+TGG 0.379092 7_4:+58097687 Msa1166090:CDS
TTAGTAGTATTCAATTTCTC+CGG 0.379490 7_4:-58095521 None:intergenic
GGTTCAAGCTCTGGCAGCAT+TGG 0.388551 7_4:+58097853 Msa1166090:CDS
CCTAAATTTACAGCTTATGA+TGG 0.388769 7_4:+58097486 Msa1166090:CDS
GTTCAAGCTCTGGCAGCATT+GGG 0.395220 7_4:+58097854 Msa1166090:CDS
GACACATAGTTCTGGGCCTT+CGG 0.398281 7_4:-58097195 None:intergenic
TTAAGGCCCTGTCGAAAATT+GGG 0.408531 7_4:-58099427 None:intergenic
AATAGTAGTAATAGTGTGTT+TGG 0.408847 7_4:-58094904 None:intergenic
TTATTCTTCATCTTCTTCAC+TGG 0.421992 7_4:+58094925 Msa1166090:five_prime_UTR
AAATCACCTATGCCAGAATC+AGG 0.426205 7_4:+58098576 Msa1166090:CDS
ATGTACAACAGACACCTAAC+TGG 0.427081 7_4:-58099628 None:intergenic
CTGGCAGAAGGCCTCTTAAC+CGG 0.429177 7_4:-58099389 None:intergenic
ATCAGCATCGGTAGCATCAT+TGG 0.430519 7_4:-58095173 None:intergenic
TTATCCGGAGTTATGTAATC+TGG 0.433913 7_4:-58095336 None:intergenic
TTTAAAGGACCTTTCCCAAA+AGG 0.437149 7_4:+58097278 Msa1166090:CDS
CATCAACAAGTTGTGGAACT+TGG 0.439973 7_4:+58097117 Msa1166090:CDS
GAAGGCCTCTTAACCGGATC+AGG 0.440181 7_4:-58099383 None:intergenic
AGCATCATTGGTAACCCTAA+TGG 0.442002 7_4:-58095161 None:intergenic
GTATTTGCAATGGTCCAGTT+AGG 0.445422 7_4:+58099614 Msa1166090:three_prime_UTR
TGTGTCTTTCTCTACCCAAC+TGG 0.450537 7_4:-58099735 None:intergenic
CGTGCATCTCCTTCCTCAAT+CGG 0.457649 7_4:-58098459 None:intergenic
GAAGAAGTTATAGTCGTTGT+TGG 0.463269 7_4:-58095094 None:intergenic
GTGTCTGTTGTACATTGTAA+TGG 0.464251 7_4:+58099636 Msa1166090:three_prime_UTR
TTTGATGGAGGTTCAAGCTC+TGG 0.468681 7_4:+58097844 Msa1166090:CDS
GGCAAGTTGCCACTCCTGCC+TGG 0.472331 7_4:+58098624 Msa1166090:CDS
TGATAGTAGCCTTCCGATTG+AGG 0.477068 7_4:+58098446 Msa1166090:CDS
AAAATCAAGGGGAAGGAAGA+AGG 0.477940 7_4:+58094994 Msa1166090:CDS
TTGGATCTTTGGTTTGCATA+GGG 0.480814 7_4:-58097309 None:intergenic
TAAAAGCAAAAGATGTCGAC+TGG 0.484851 7_4:+58095541 Msa1166090:CDS
GGCCATGATCGATCCTGATC+CGG 0.491918 7_4:+58099370 Msa1166090:intron
ATTCTCATTAAGGATTTCCT+GGG 0.493473 7_4:-58098490 None:intergenic
CACTGACTTTCATGAGATTG+AGG 0.501967 7_4:+58097524 Msa1166090:CDS
TTGTTGATGGTCACCAGAAA+AGG 0.502504 7_4:-58097103 None:intergenic
TCGATCCTGATCCGGTTAAG+AGG 0.503788 7_4:+58099378 Msa1166090:CDS
TTCTCCGGGGATTTAGGGCA+AGG 0.506459 7_4:-58095506 None:intergenic
TAGTAGTATTCAATTTCTCC+GGG 0.510401 7_4:-58095520 None:intergenic
AGAATGTGACACATAGTTCT+GGG 0.510819 7_4:-58097202 None:intergenic
TCTTATCAGCAAATTGGTCG+AGG 0.512410 7_4:+58097645 Msa1166090:intron
ACAAGTTGTGGAACTTGGTA+AGG 0.513324 7_4:+58097122 Msa1166090:CDS
CTAAATTTACAGCTTATGAT+GGG 0.515148 7_4:+58097487 Msa1166090:CDS
TGCAGCTACATTGCGTTGCA+GGG 0.517169 7_4:+58097224 Msa1166090:CDS
TGGGTTCTCTACCAACTCTC+TGG 0.519512 7_4:-58099408 None:intergenic
CCAGAAAAGGTAGGGCTAAG+AGG 0.520423 7_4:-58097090 None:intergenic
CAGAAAAGGTAGGGCTAAGA+GGG 0.522352 7_4:-58097089 None:intergenic
CTACATAGATAGACAGATGA+TGG 0.526702 7_4:-58099501 None:intergenic
GTTATAGTCGTTGTTGGTAA+CGG 0.526884 7_4:-58095088 None:intergenic
GGAAGTAGCTGTTGATATAA+CGG 0.528442 7_4:+58097158 Msa1166090:CDS
TGACATCCTGATTCTGGCAT+AGG 0.528630 7_4:-58098582 None:intergenic
TTTGGATCTTTGGTTTGCAT+AGG 0.529211 7_4:-58097310 None:intergenic
AACCAAAGATCCAAATGTGC+AGG 0.530641 7_4:+58097318 Msa1166090:CDS
GCAATTTCAAAACTTGCTCA+AGG 0.530918 7_4:+58098656 Msa1166090:CDS
AACCGGATCAGGATCGATCA+TGG 0.537059 7_4:-58099372 None:intergenic
CGAACAACTGTACATTCAGA+TGG 0.538277 7_4:+58098027 Msa1166090:CDS
GAGGCCTTCTGCCAGAGAGT+TGG 0.541203 7_4:+58099397 Msa1166090:CDS
GGTTACCATGAGAACATTGT+GGG 0.544802 7_4:+58097980 Msa1166090:intron
TGGTGACCATCAACAAGTTG+TGG 0.545627 7_4:+58097110 Msa1166090:CDS
GGGAAAGGTCCTTTAAATAG+GGG 0.547532 7_4:-58097272 None:intergenic
TAGACAGATGATGGTCCAGC+AGG 0.554155 7_4:-58099492 None:intergenic
ACCGATGCTGATTCAAGAGA+TGG 0.558070 7_4:+58095184 Msa1166090:CDS
GTTGATATAACGGTAGCTGC+TGG 0.559132 7_4:+58097168 Msa1166090:CDS
AAACCCCAAAATCAAGGGGA+AGG 0.559167 7_4:+58094987 Msa1166090:CDS
ACGCAGTACACAGTTACAGC+TGG 0.560665 7_4:+58097728 Msa1166090:CDS
AAATAGGGGTTACTAAAGCA+AGG 0.563788 7_4:-58097258 None:intergenic
TAGCCCTTGCCCTAAATCCC+CGG 0.565880 7_4:+58095502 Msa1166090:CDS
AATAGCCCACAATGTTCTCA+TGG 0.571060 7_4:-58097985 None:intergenic
AGAAAATATCAACCTTGTCA+AGG 0.580681 7_4:-58098521 None:intergenic
TGAAATTGCAATGAATGACC+AGG 0.582007 7_4:-58098642 None:intergenic
AGTAGCCTTCCGATTGAGGA+AGG 0.582590 7_4:+58098450 Msa1166090:CDS
AATGAATGACCAGGCAGGAG+TGG 0.584677 7_4:-58098633 None:intergenic
AGATGCACGTTATATGCCCC+AGG 0.587833 7_4:+58098473 Msa1166090:CDS
GATTTGTCTCTGAATCGAGA+AGG 0.588616 7_4:-58095129 None:intergenic
CTTATCAGCAAATTGGTCGA+GGG 0.596939 7_4:+58097646 Msa1166090:intron
AGGTTACCATGAGAACATTG+TGG 0.597160 7_4:+58097979 Msa1166090:intron
ACTTGTCATAGATGGTGTCT+CGG 0.597463 7_4:+58097062 Msa1166090:intron
GATGGTCACCAGAAAAGGTA+GGG 0.598031 7_4:-58097098 None:intergenic
TCTACCAACTCTCTGGCAGA+AGG 0.598894 7_4:-58099401 None:intergenic
TACTCCAGATTACATAACTC+CGG 0.599238 7_4:+58095332 Msa1166090:CDS
TGATGGTCACCAGAAAAGGT+AGG 0.601997 7_4:-58097099 None:intergenic
ATCGAGAAGGTTCTGGAAGG+CGG 0.606702 7_4:-58095116 None:intergenic
CACCTGATAATTCTCGCGCA+TGG 0.607613 7_4:+58099581 Msa1166090:three_prime_UTR
CATCTCCTTCCTCAATCGGA+AGG 0.611201 7_4:-58098455 None:intergenic
TCTCCGGGGATTTAGGGCAA+GGG 0.611486 7_4:-58095505 None:intergenic
GCCATCTCTTGAATCAGCAT+CGG 0.612326 7_4:-58095185 None:intergenic
GGGTTACTAAAGCAAGGAGG+AGG 0.617439 7_4:-58097252 None:intergenic
AAGGAGAAAAGCTTTGATGG+AGG 0.617943 7_4:+58097832 Msa1166090:intron
AGTTACAGCTGGATACAGAA+AGG 0.621788 7_4:+58097739 Msa1166090:CDS
TTGTCCTTCTGCTAATAACT+CGG 0.621799 7_4:-58098086 None:intergenic
CATAGCTTATCTGTAAACAA+AGG 0.622293 7_4:+58098061 Msa1166090:CDS
ATTGCAATGAATGACCAGGC+AGG 0.623023 7_4:-58098638 None:intergenic
AAATATCAACCTTGTCAAGG+TGG 0.623552 7_4:-58098518 None:intergenic
TGGTAAGGACTCTGTTGCAG+AGG 0.626891 7_4:+58097137 Msa1166090:CDS
GGCTCCGAGTTATTAGCAGA+AGG 0.627136 7_4:+58098082 Msa1166090:CDS
TGCAAGTTCTGTATTTGCAA+TGG 0.627920 7_4:+58099604 Msa1166090:three_prime_UTR
GGAAGGAAGAAGGCACCACT+CGG 0.629021 7_4:+58095004 Msa1166090:CDS
GAATTATGACCACCTTGACA+AGG 0.636957 7_4:+58098509 Msa1166090:CDS
TCATTGGTAACCCTAATGGA+AGG 0.639494 7_4:-58095157 None:intergenic
TTCTCATTAAGGATTTCCTG+GGG 0.641683 7_4:-58098489 None:intergenic
AAAAGCAAAAGATGTCGACT+GGG 0.647827 7_4:+58095542 Msa1166090:CDS
GTCTTTCTCTACCCAACTGG+AGG 0.652542 7_4:-58099732 None:intergenic
TGAATCGAGAAGGTTCTGGA+AGG 0.655355 7_4:-58095119 None:intergenic
GATCAGTGTCGATTGTGTCA+TGG 0.668665 7_4:+58099523 Msa1166090:three_prime_UTR
GGTAGCTGCTGGTAAGCCGA+AGG 0.673285 7_4:+58097179 Msa1166090:CDS
ACATAACTCCGGATAATCAG+CGG 0.676793 7_4:+58095343 Msa1166090:CDS
ACTGCGATTTATACACGACA+AGG 0.681658 7_4:+58098335 Msa1166090:CDS
CTTGTGTTACTCGCACCGAG+TGG 0.719837 7_4:-58095019 None:intergenic
CTGCGATTTATACACGACAA+GGG 0.720865 7_4:+58098336 Msa1166090:CDS
AGTAGTATTCAATTTCTCCG+GGG 0.726721 7_4:-58095519 None:intergenic
TAGGGGTTACTAAAGCAAGG+AGG 0.776403 7_4:-58097255 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGTATTTATAAATAGTAAAA+TGG + chr7_4:58095715-58095734 Msa1166090:intron 10.0%
!!! ATTTATATTTTGTTTTGATT+TGG + chr7_4:58098289-58098308 Msa1166090:intron 10.0%
!!! TTTTTTACATAAATATTATC+AGG - chr7_4:58098384-58098403 None:intergenic 10.0%
!! GATAATATTTATGTAAAAAA+TGG + chr7_4:58098384-58098403 Msa1166090:CDS 10.0%
!!! ATTTTTAAATCTTTGAATCT+TGG - chr7_4:58094959-58094978 None:intergenic 15.0%
!! ATTTACTAATTTGAAAAACT+GGG + chr7_4:58095738-58095757 Msa1166090:intron 15.0%
!! GAAAATTAACTTAAAAAACA+TGG - chr7_4:58096838-58096857 None:intergenic 15.0%
!! ATGGACTTAAAATATATTAA+TGG + chr7_4:58099655-58099674 Msa1166090:three_prime_UTR 15.0%
!! GATTTACTAATTTGAAAAAC+TGG + chr7_4:58095737-58095756 Msa1166090:intron 20.0%
!!! AAGTTAATTTTCAACATATC+TGG + chr7_4:58096846-58096865 Msa1166090:intron 20.0%
!!! ATAAAATTCCTTTTGAAACA+TGG - chr7_4:58097552-58097571 None:intergenic 20.0%
!!! TTATGGTTTTCTCTTATTTA+AGG + chr7_4:58097885-58097904 Msa1166090:intron 20.0%
!! AATTATGTAAAAAGTTATGC+AGG - chr7_4:58098259-58098278 None:intergenic 20.0%
!!! TTTGTTTTGATTTGGAAATT+TGG + chr7_4:58098297-58098316 Msa1166090:intron 20.0%
!!! CATTTTTTGAATCTTAAAGA+AGG + chr7_4:58098603-58098622 Msa1166090:CDS 20.0%
!! TTAAAATATGTAAGCTACTA+TGG + chr7_4:58098871-58098890 Msa1166090:intron 20.0%
!! TTAAAATATGTAAGCTACTA+TGG + chr7_4:58098871-58098890 Msa1166090:intron 20.0%
!!! TGATGTTTTGATATTTATTC+AGG + chr7_4:58099349-58099368 Msa1166090:intron 20.0%
! AAATCAAAATCCTTCCATTA+GGG + chr7_4:58095147-58095166 Msa1166090:CDS 25.0%
! TCAATTTCGGAAAATGAAAA+GGG - chr7_4:58095251-58095270 None:intergenic 25.0%
! TTAGTAGTATTCAATTTCTC+CGG - chr7_4:58095524-58095543 None:intergenic 25.0%
!! AGACATTTTTCATGCAAATT+TGG - chr7_4:58095925-58095944 None:intergenic 25.0%
! TGTCTACAAAGTCATAAATT+GGG - chr7_4:58096244-58096263 None:intergenic 25.0%
! TTGTCTACAAAGTCATAAAT+TGG - chr7_4:58096245-58096264 None:intergenic 25.0%
! TTTATGACTTTGTAGACAAT+TGG + chr7_4:58096246-58096265 Msa1166090:intron 25.0%
! TTATGACTTTGTAGACAATT+GGG + chr7_4:58096247-58096266 Msa1166090:intron 25.0%
!!! TAGAAAAGTTGGTAGAAAAT+AGG + chr7_4:58096505-58096524 Msa1166090:intron 25.0%
!! TTTTCTAATGGTTTCTCTAA+TGG - chr7_4:58096640-58096659 None:intergenic 25.0%
! AACCATTAGAAAAGATTTAG+AGG + chr7_4:58096647-58096666 Msa1166090:intron 25.0%
! TGTACAAACAATTAAGCTAT+AGG - chr7_4:58096810-58096829 None:intergenic 25.0%
! AACATATCTGGTTAAATTGT+AGG + chr7_4:58096858-58096877 Msa1166090:intron 25.0%
! AATGGGTAAATAAATAGCAT+TGG - chr7_4:58097023-58097042 None:intergenic 25.0%
! ACCATTATACAGTTAGAAAA+TGG - chr7_4:58097448-58097467 None:intergenic 25.0%
! CATCATAAGCTGTAAATTTA+GGG - chr7_4:58097488-58097507 None:intergenic 25.0%
! CTAAATTTACAGCTTATGAT+GGG + chr7_4:58097487-58097506 Msa1166090:CDS 25.0%
!! AAAGTATTAAAGCGAATAGA+TGG + chr7_4:58097687-58097706 Msa1166090:CDS 25.0%
! ACTGTTATGTAGATTTGATT+TGG + chr7_4:58098147-58098166 Msa1166090:intron 25.0%
!!! AAGGTTGATATTTTCTCTTT+GGG + chr7_4:58098528-58098547 Msa1166090:CDS 25.0%
! AATGAACTATGATTCTATTG+TGG + chr7_4:58098824-58098843 Msa1166090:intron 25.0%
! AATGAACTATGATTCTATTG+TGG + chr7_4:58098824-58098843 Msa1166090:intron 25.0%
! ATAAAACATGAGTTGTAAAC+AGG - chr7_4:58099169-58099188 None:intergenic 25.0%
TTATTCTTCATCTTCTTCAC+TGG + chr7_4:58094925-58094944 Msa1166090:five_prime_UTR 30.0%
CAAATCAAAATCCTTCCATT+AGG + chr7_4:58095146-58095165 Msa1166090:CDS 30.0%
TTCTTAGTCAAGATTTCTTC+TGG + chr7_4:58095209-58095228 Msa1166090:CDS 30.0%
CTCAATTTCGGAAAATGAAA+AGG - chr7_4:58095252-58095271 None:intergenic 30.0%
! AAATGGAATCGACTCAATTT+CGG - chr7_4:58095264-58095283 None:intergenic 30.0%
!!! ATTGAGTCGATTCCATTTTT+TGG + chr7_4:58095266-58095285 Msa1166090:intron 30.0%
CAAACTTCGAAACCAAAAAA+TGG - chr7_4:58095281-58095300 None:intergenic 30.0%
TAGTAGTATTCAATTTCTCC+GGG - chr7_4:58095523-58095542 None:intergenic 30.0%
GATGACATACTTCTTGAATA+TGG - chr7_4:58096014-58096033 None:intergenic 30.0%
AGAATAATCCGATGATTTCA+GGG - chr7_4:58096146-58096165 None:intergenic 30.0%
TAGAATAATCCGATGATTTC+AGG - chr7_4:58096147-58096166 None:intergenic 30.0%
GGACTAAACATATGTTCTAT+CGG + chr7_4:58096307-58096326 Msa1166090:intron 30.0%
! TCTACCAACTTTTCTACTAT+AGG - chr7_4:58096501-58096520 None:intergenic 30.0%
! GTTTCTCTAATGGTTTTCTT+AGG - chr7_4:58096630-58096649 None:intergenic 30.0%
! GACCTCTAAATCTTTTCTAA+TGG - chr7_4:58096652-58096671 None:intergenic 30.0%
GTTCTATCAAAGACCATATT+TGG - chr7_4:58096687-58096706 None:intergenic 30.0%
TGGTCTTTGATAGAACATTA+TGG + chr7_4:58096691-58096710 Msa1166090:intron 30.0%
ACTAAACATATCTAACTGGA+GGG + chr7_4:58096779-58096798 Msa1166090:intron 30.0%
TTATACATTCCATGCTACAT+AGG + chr7_4:58096940-58096959 Msa1166090:intron 30.0%
! GCATGTTGATTAGAGAAAAT+GGG - chr7_4:58097040-58097059 None:intergenic 30.0%
! TGCATGTTGATTAGAGAAAA+TGG - chr7_4:58097041-58097060 None:intergenic 30.0%
CTTTAGTAACCCCTATTTAA+AGG + chr7_4:58097263-58097282 Msa1166090:CDS 30.0%
! ACTTTTCCACCATTAATGAA+CGG - chr7_4:58097374-58097393 None:intergenic 30.0%
!! GCCATTTTCTAACTGTATAA+TGG + chr7_4:58097444-58097463 Msa1166090:intron 30.0%
CCATCATAAGCTGTAAATTT+AGG - chr7_4:58097489-58097508 None:intergenic 30.0%
CCTAAATTTACAGCTTATGA+TGG + chr7_4:58097486-58097505 Msa1166090:CDS 30.0%
!! TGTTGAGAACTGTTTTGAAT+TGG + chr7_4:58097573-58097592 Msa1166090:intron 30.0%
TACTTCTCTTATCAGCAAAT+TGG + chr7_4:58097639-58097658 Msa1166090:intron 30.0%
! AAGGTATCATCTTCATACTA+CGG + chr7_4:58097758-58097777 Msa1166090:intron 30.0%
!! AGCATTGGGTTTGTATTTTA+TGG + chr7_4:58097868-58097887 Msa1166090:intron 30.0%
!! ATTTAAGGTTCAAGCATTGA+TGG + chr7_4:58097900-58097919 Msa1166090:intron 30.0%
GTTTATCATCTTACCTCTAT+AGG + chr7_4:58097959-58097978 Msa1166090:intron 30.0%
CATAGCTTATCTGTAAACAA+AGG + chr7_4:58098061-58098080 Msa1166090:CDS 30.0%
ACTATAGATTAAGGAAACCA+TGG - chr7_4:58098233-58098252 None:intergenic 30.0%
TGCAGGTTTACTATAGATTA+AGG - chr7_4:58098242-58098261 None:intergenic 30.0%
!! TTTGATTTGGAAATTTGGAC+AGG + chr7_4:58098302-58098321 Msa1166090:intron 30.0%
AAAAATGGTGTCTATAAGCT+TGG + chr7_4:58098399-58098418 Msa1166090:CDS 30.0%
ATTCTCATTAAGGATTTCCT+GGG - chr7_4:58098493-58098512 None:intergenic 30.0%
AATTCTCATTAAGGATTTCC+TGG - chr7_4:58098494-58098513 None:intergenic 30.0%
AGAAAATATCAACCTTGTCA+AGG - chr7_4:58098524-58098543 None:intergenic 30.0%
!!! CAAGGTTGATATTTTCTCTT+TGG + chr7_4:58098527-58098546 Msa1166090:CDS 30.0%
AAAAAATGACATCCTGATTC+TGG - chr7_4:58098591-58098610 None:intergenic 30.0%
! TCAATTTTTCGCTGTTCTTA+AGG - chr7_4:58099447-58099466 None:intergenic 30.0%
CCAAAAGACATTCACAAAAT+TGG - chr7_4:58099549-58099568 None:intergenic 30.0%
! CCAATTTTGTGAATGTCTTT+TGG + chr7_4:58099546-58099565 Msa1166090:three_prime_UTR 30.0%
GAGAAAAACCCCAAAATCAA+GGG + chr7_4:58094982-58095001 Msa1166090:CDS 35.0%
AGAAAAACCCCAAAATCAAG+GGG + chr7_4:58094983-58095002 Msa1166090:CDS 35.0%
! GTTATAGTCGTTGTTGGTAA+CGG - chr7_4:58095091-58095110 None:intergenic 35.0%
GAAGAAGTTATAGTCGTTGT+TGG - chr7_4:58095097-58095116 None:intergenic 35.0%
TACTCCAGATTACATAACTC+CGG + chr7_4:58095332-58095351 Msa1166090:CDS 35.0%
TTATCCGGAGTTATGTAATC+TGG - chr7_4:58095339-58095358 None:intergenic 35.0%
! TTCAAAATCCGCTGATTATC+CGG - chr7_4:58095354-58095373 None:intergenic 35.0%
!! GATAATCAGCGGATTTTGAA+CGG + chr7_4:58095354-58095373 Msa1166090:CDS 35.0%
!! GAACGGTATCGATTTCAATA+AGG + chr7_4:58095371-58095390 Msa1166090:CDS 35.0%
!! GGTATCGATTTCAATAAGGT+GGG + chr7_4:58095375-58095394 Msa1166090:intron 35.0%
!! GTATCGATTTCAATAAGGTG+GGG + chr7_4:58095376-58095395 Msa1166090:intron 35.0%
AGTAGTATTCAATTTCTCCG+GGG - chr7_4:58095522-58095541 None:intergenic 35.0%
TAAAAGCAAAAGATGTCGAC+TGG + chr7_4:58095541-58095560 Msa1166090:CDS 35.0%
! AAAAGCAAAAGATGTCGACT+GGG + chr7_4:58095542-58095561 Msa1166090:CDS 35.0%
TACATGTGCATACACAAACA+CGG - chr7_4:58095699-58095718 None:intergenic 35.0%
GGATGTCTCATCAAGTTTAT+GGG + chr7_4:58095759-58095778 Msa1166090:intron 35.0%
GGATTGTGAACATATGTTGA+TGG + chr7_4:58095859-58095878 Msa1166090:intron 35.0%
GCATGAAAAATGTCTACTCA+TGG + chr7_4:58095930-58095949 Msa1166090:intron 35.0%
AGTATGTCATCTATGAAGCA+CGG + chr7_4:58096023-58096042 Msa1166090:intron 35.0%
CATGTCGTATCCAATACTTA+TGG - chr7_4:58096052-58096071 None:intergenic 35.0%
GAAGCACAGATACTCAAAAA+TGG - chr7_4:58096105-58096124 None:intergenic 35.0%
AATAATCCGATGATTTCAGG+GGG - chr7_4:58096144-58096163 None:intergenic 35.0%
GAATAATCCGATGATTTCAG+GGG - chr7_4:58096145-58096164 None:intergenic 35.0%
TATCCCCATTATGCACAATT+GGG - chr7_4:58096184-58096203 None:intergenic 35.0%
ATATCCCCATTATGCACAAT+TGG - chr7_4:58096185-58096204 None:intergenic 35.0%
ACGTTGAAACTAGAAATGAC+AGG - chr7_4:58096215-58096234 None:intergenic 35.0%
CAGACACCTTTCATAAAAAG+GGG - chr7_4:58096288-58096307 None:intergenic 35.0%
CCAGACACCTTTCATAAAAA+GGG - chr7_4:58096289-58096308 None:intergenic 35.0%
TCCAGACACCTTTCATAAAA+AGG - chr7_4:58096290-58096309 None:intergenic 35.0%
AGACTAGACATGATAGGATT+AGG + chr7_4:58096442-58096461 Msa1166090:intron 35.0%
AGCACCTATAGTAGAAAAGT+TGG + chr7_4:58096494-58096513 Msa1166090:intron 35.0%
TGGTAGAAAATAGGCTTAGA+TGG + chr7_4:58096514-58096533 Msa1166090:intron 35.0%
GAAAATAGGCTTAGATGGTT+TGG + chr7_4:58096519-58096538 Msa1166090:intron 35.0%
TTGATCTACTCTTCTTACCA+CGG - chr7_4:58096571-58096590 None:intergenic 35.0%
GGTAAGAAGAGTAGATCAAA+TGG + chr7_4:58096572-58096591 Msa1166090:intron 35.0%
AAGAAGAGTAGATCAAATGG+AGG + chr7_4:58096575-58096594 Msa1166090:intron 35.0%
AGTCAAGTTAAAAGAGGTAG+AGG + chr7_4:58096600-58096619 Msa1166090:intron 35.0%
AGATTTAGAGGTCAATGAGT+TGG + chr7_4:58096659-58096678 Msa1166090:intron 35.0%
! CAATGAGTTGGATCCAAATA+TGG + chr7_4:58096671-58096690 Msa1166090:intron 35.0%
CTGGACTAAACATATCTAAC+TGG + chr7_4:58096775-58096794 Msa1166090:intron 35.0%
GACTAAACATATCTAACTGG+AGG + chr7_4:58096778-58096797 Msa1166090:intron 35.0%
! CACTAATTTTTCCATGTGGT+GGG - chr7_4:58096975-58096994 None:intergenic 35.0%
ACATGCATACTTGTCATAGA+TGG + chr7_4:58097054-58097073 Msa1166090:intron 35.0%
GGAAGTAGCTGTTGATATAA+CGG + chr7_4:58097158-58097177 Msa1166090:CDS 35.0%
AGAATGTGACACATAGTTCT+GGG - chr7_4:58097205-58097224 None:intergenic 35.0%
AAATAGGGGTTACTAAAGCA+AGG - chr7_4:58097261-58097280 None:intergenic 35.0%
TGGGAAAGGTCCTTTAAATA+GGG - chr7_4:58097276-58097295 None:intergenic 35.0%
TTGGGAAAGGTCCTTTAAAT+AGG - chr7_4:58097277-58097296 None:intergenic 35.0%
TTTAAAGGACCTTTCCCAAA+AGG + chr7_4:58097278-58097297 Msa1166090:CDS 35.0%
!! TTGGATCTTTGGTTTGCATA+GGG - chr7_4:58097312-58097331 None:intergenic 35.0%
!! TTTGGATCTTTGGTTTGCAT+AGG - chr7_4:58097313-58097332 None:intergenic 35.0%
AATGAACGGGATACTTGTAA+AGG - chr7_4:58097360-58097379 None:intergenic 35.0%
ACAAGTATCCCGTTCATTAA+TGG + chr7_4:58097362-58097381 Msa1166090:intron 35.0%
! CTTTTCCACCATTAATGAAC+GGG - chr7_4:58097373-58097392 None:intergenic 35.0%
CTGTATAATGGTATGACTGT+AGG + chr7_4:58097456-58097475 Msa1166090:intron 35.0%
! TTGAGGTACCATGTTTCAAA+AGG + chr7_4:58097541-58097560 Msa1166090:intron 35.0%
CTCCTTCAATCACAGAATAT+CGG - chr7_4:58097818-58097837 None:intergenic 35.0%
! TTGAAGGAGAAAAGCTTTGA+TGG + chr7_4:58097829-58097848 Msa1166090:intron 35.0%
! TTGTGGGCTATTATACTTCA+TGG + chr7_4:58097996-58098015 Msa1166090:CDS 35.0%
TTGTCCTTCTGCTAATAACT+CGG - chr7_4:58098089-58098108 None:intergenic 35.0%
ATCTACATAACAGTCAGACA+AGG - chr7_4:58098141-58098160 None:intergenic 35.0%
!! GTCTATAAGCTTGGTGATTT+TGG + chr7_4:58098408-58098427 Msa1166090:CDS 35.0%
TTCTCATTAAGGATTTCCTG+GGG - chr7_4:58098492-58098511 None:intergenic 35.0%
GGTGGTCATAATTCTCATTA+AGG - chr7_4:58098503-58098522 None:intergenic 35.0%
AAATATCAACCTTGTCAAGG+TGG - chr7_4:58098521-58098540 None:intergenic 35.0%
! ATTCTGGCATAGGTGATTTT+CGG - chr7_4:58098575-58098594 None:intergenic 35.0%
TGAAATTGCAATGAATGACC+AGG - chr7_4:58098645-58098664 None:intergenic 35.0%
! GCAATTTCAAAACTTGCTCA+AGG + chr7_4:58098656-58098675 Msa1166090:CDS 35.0%
CGACTAATAAATCCAATGTG+TGG + chr7_4:58098752-58098771 Msa1166090:intron 35.0%
!!! TTTTGAGATGTAGTACAGCA+TGG - chr7_4:58099013-58099032 None:intergenic 35.0%
TAAACAGGTATAGCAATCCA+TGG - chr7_4:58099154-58099173 None:intergenic 35.0%
AAAGTGAAAAACAAGTGTGG+TGG - chr7_4:58099471-58099490 None:intergenic 35.0%
GGAAAAGTGAAAAACAAGTG+TGG - chr7_4:58099474-58099493 None:intergenic 35.0%
!! TTGTTTTTCACTTTTCCTGC+TGG + chr7_4:58099477-58099496 Msa1166090:three_prime_UTR 35.0%
CTACATAGATAGACAGATGA+TGG - chr7_4:58099504-58099523 None:intergenic 35.0%
TGCAAGTTCTGTATTTGCAA+TGG + chr7_4:58099604-58099623 Msa1166090:three_prime_UTR 35.0%
GTGTCTGTTGTACATTGTAA+TGG + chr7_4:58099636-58099655 Msa1166090:three_prime_UTR 35.0%
AAACAACAGGCAAACATTTC+TGG - chr7_4:58099707-58099726 None:intergenic 35.0%
!!! TTGTTTTTTCACCTCCAGTT+GGG + chr7_4:58099721-58099740 Msa1166090:three_prime_UTR 35.0%
CGAGAAAAACCCCAAAATCA+AGG + chr7_4:58094981-58095000 Msa1166090:CDS 40.0%
! TCTTCCTTCCCCTTGATTTT+GGG - chr7_4:58094994-58095013 None:intergenic 40.0%
! TTCTTCCTTCCCCTTGATTT+TGG - chr7_4:58094995-58095014 None:intergenic 40.0%
AAAATCAAGGGGAAGGAAGA+AGG + chr7_4:58094994-58095013 Msa1166090:CDS 40.0%
GATTTGTCTCTGAATCGAGA+AGG - chr7_4:58095132-58095151 None:intergenic 40.0%
! TCATTGGTAACCCTAATGGA+AGG - chr7_4:58095160-58095179 None:intergenic 40.0%
! AGCATCATTGGTAACCCTAA+TGG - chr7_4:58095164-58095183 None:intergenic 40.0%
ACATAACTCCGGATAATCAG+CGG + chr7_4:58095343-58095362 Msa1166090:CDS 40.0%
!! CGGTATCGATTTCAATAAGG+TGG + chr7_4:58095374-58095393 Msa1166090:intron 40.0%
TGTAATGTAATGTGTTCCGC+AGG + chr7_4:58095475-58095494 Msa1166090:intron 40.0%
TCAATTTCTCCGGGGATTTA+GGG - chr7_4:58095514-58095533 None:intergenic 40.0%
TTCAATTTCTCCGGGGATTT+AGG - chr7_4:58095515-58095534 None:intergenic 40.0%
GGGATGTCTCATCAAGTTTA+TGG + chr7_4:58095758-58095777 Msa1166090:intron 40.0%
CGACATGTATGAGTGCATAT+CGG + chr7_4:58096065-58096084 Msa1166090:intron 40.0%
GACATGTATGAGTGCATATC+GGG + chr7_4:58096066-58096085 Msa1166090:intron 40.0%
ACTCAAAAATGGCTTCTGAG+TGG - chr7_4:58096094-58096113 None:intergenic 40.0%
ACCTCCCAATTGTGCATAAT+GGG + chr7_4:58096177-58096196 Msa1166090:intron 40.0%
! CTCTAGCCCCTTTTTATGAA+AGG + chr7_4:58096279-58096298 Msa1166090:intron 40.0%
!!! CCCTTTTTATGAAAGGTGTC+TGG + chr7_4:58096286-58096305 Msa1166090:intron 40.0%
GTGGTAAGACTAGACATGAT+AGG + chr7_4:58096436-58096455 Msa1166090:intron 40.0%
TGACATCATTAGAGAGAGAG+TGG + chr7_4:58096467-58096486 Msa1166090:intron 40.0%
GACATCATTAGAGAGAGAGT+GGG + chr7_4:58096468-58096487 Msa1166090:intron 40.0%
ACATCATTAGAGAGAGAGTG+GGG + chr7_4:58096469-58096488 Msa1166090:intron 40.0%
GAGGAGAGTCAAGTTAAAAG+AGG + chr7_4:58096594-58096613 Msa1166090:intron 40.0%
!! TTTTCCATGTGGTGGGAAAT+GGG - chr7_4:58096968-58096987 None:intergenic 40.0%
!! TTTTTCCATGTGGTGGGAAA+TGG - chr7_4:58096969-58096988 None:intergenic 40.0%
! GCACTAATTTTTCCATGTGG+TGG - chr7_4:58096976-58096995 None:intergenic 40.0%
! GCAGCACTAATTTTTCCATG+TGG - chr7_4:58096979-58096998 None:intergenic 40.0%
ACTTGTCATAGATGGTGTCT+CGG + chr7_4:58097062-58097081 Msa1166090:intron 40.0%
!! TTGTTGATGGTCACCAGAAA+AGG - chr7_4:58097106-58097125 None:intergenic 40.0%
!! CAAGTTCCACAACTTGTTGA+TGG - chr7_4:58097119-58097138 None:intergenic 40.0%
CATCAACAAGTTGTGGAACT+TGG + chr7_4:58097117-58097136 Msa1166090:CDS 40.0%
ACAAGTTGTGGAACTTGGTA+AGG + chr7_4:58097122-58097141 Msa1166090:CDS 40.0%
CAGAATGTGACACATAGTTC+TGG - chr7_4:58097206-58097225 None:intergenic 40.0%
GGGAAAGGTCCTTTAAATAG+GGG - chr7_4:58097275-58097294 None:intergenic 40.0%
! ATAGGGATCTGTCTCCTTTT+GGG - chr7_4:58097295-58097314 None:intergenic 40.0%
AACCAAAGATCCAAATGTGC+AGG + chr7_4:58097318-58097337 Msa1166090:CDS 40.0%
TACCTGCACATTTGGATCTT+TGG - chr7_4:58097323-58097342 None:intergenic 40.0%
TAGAGTGATACCTGCACATT+TGG - chr7_4:58097331-58097350 None:intergenic 40.0%
AGTATCCCGTTCATTAATGG+TGG + chr7_4:58097365-58097384 Msa1166090:intron 40.0%
GGTGGAAAAGTCATTGTAAC+TGG + chr7_4:58097383-58097402 Msa1166090:intron 40.0%
!! CACTGACTTTCATGAGATTG+AGG + chr7_4:58097524-58097543 Msa1166090:CDS 40.0%
CATGAAGTTGAATGCGATGA+AGG - chr7_4:58097604-58097623 None:intergenic 40.0%
CTTCATCGCATTCAACTTCA+TGG + chr7_4:58097602-58097621 Msa1166090:intron 40.0%
TCTTATCAGCAAATTGGTCG+AGG + chr7_4:58097645-58097664 Msa1166090:intron 40.0%
CTTATCAGCAAATTGGTCGA+GGG + chr7_4:58097646-58097665 Msa1166090:intron 40.0%
AGTTACAGCTGGATACAGAA+AGG + chr7_4:58097739-58097758 Msa1166090:CDS 40.0%
! ACGGAGACTTCTTCTTTTCT+TGG + chr7_4:58097777-58097796 Msa1166090:intron 40.0%
! CGGAGACTTCTTCTTTTCTT+GGG + chr7_4:58097778-58097797 Msa1166090:intron 40.0%
!! TCACAGAATATCGGTGTTAG+TGG - chr7_4:58097809-58097828 None:intergenic 40.0%
CACCGATATTCTGTGATTGA+AGG + chr7_4:58097813-58097832 Msa1166090:intron 40.0%
! AAGGAGAAAAGCTTTGATGG+AGG + chr7_4:58097832-58097851 Msa1166090:intron 40.0%
GTTCTCATGGTAACCTATAG+AGG - chr7_4:58097975-58097994 None:intergenic 40.0%
AGGTTACCATGAGAACATTG+TGG + chr7_4:58097979-58097998 Msa1166090:intron 40.0%
GGTTACCATGAGAACATTGT+GGG + chr7_4:58097980-58097999 Msa1166090:intron 40.0%
AATAGCCCACAATGTTCTCA+TGG - chr7_4:58097988-58098007 None:intergenic 40.0%
CGAACAACTGTACATTCAGA+TGG + chr7_4:58098027-58098046 Msa1166090:CDS 40.0%
ACTGCGATTTATACACGACA+AGG + chr7_4:58098335-58098354 Msa1166090:CDS 40.0%
CTGCGATTTATACACGACAA+GGG + chr7_4:58098336-58098355 Msa1166090:CDS 40.0%
GAATTATGACCACCTTGACA+AGG + chr7_4:58098509-58098528 Msa1166090:CDS 40.0%
AAATCACCTATGCCAGAATC+AGG + chr7_4:58098576-58098595 Msa1166090:CDS 40.0%
CAAGTCTACAAACCACACAT+TGG - chr7_4:58098767-58098786 None:intergenic 40.0%
! TGTGTGGTTTGTAGACTTGT+AGG + chr7_4:58098768-58098787 Msa1166090:intron 40.0%
!!! CAGAATTTTCTGAAGCACCA+TGG + chr7_4:58099134-58099153 Msa1166090:intron 40.0%
! GAACGATGCTACTTACTACT+TGG - chr7_4:58099247-58099266 None:intergenic 40.0%
! TAGAGAACCCAATTTTCGAC+AGG + chr7_4:58099420-58099439 Msa1166090:CDS 40.0%
! AGAGAACCCAATTTTCGACA+GGG + chr7_4:58099421-58099440 Msa1166090:CDS 40.0%
TTAAGGCCCTGTCGAAAATT+GGG - chr7_4:58099430-58099449 None:intergenic 40.0%
GTATTTGCAATGGTCCAGTT+AGG + chr7_4:58099614-58099633 Msa1166090:three_prime_UTR 40.0%
ATGTACAACAGACACCTAAC+TGG - chr7_4:58099631-58099650 None:intergenic 40.0%
ACTGGAGGTGAAAAAACAAC+AGG - chr7_4:58099720-58099739 None:intergenic 40.0%
!!! GTTGTTTTTTCACCTCCAGT+TGG + chr7_4:58099720-58099739 Msa1166090:three_prime_UTR 40.0%
AAACCCCAAAATCAAGGGGA+AGG + chr7_4:58094987-58095006 Msa1166090:CDS 45.0%
! CTTCCTTCCCCTTGATTTTG+GGG - chr7_4:58094993-58095012 None:intergenic 45.0%
!! TGAATCGAGAAGGTTCTGGA+AGG - chr7_4:58095122-58095141 None:intergenic 45.0%
TCTCTGAATCGAGAAGGTTC+TGG - chr7_4:58095126-58095145 None:intergenic 45.0%
!! ATCAGCATCGGTAGCATCAT+TGG - chr7_4:58095176-58095195 None:intergenic 45.0%
!! ACCGATGCTGATTCAAGAGA+TGG + chr7_4:58095184-58095203 Msa1166090:CDS 45.0%
GCCATCTCTTGAATCAGCAT+CGG - chr7_4:58095188-58095207 None:intergenic 45.0%
GCATGTAGTGCGAATCAGTA+TGG + chr7_4:58095838-58095857 Msa1166090:intron 45.0%
GCAGTCTCTTCTAAGTGGTA+GGG - chr7_4:58095963-58095982 None:intergenic 45.0%
TGCAGTCTCTTCTAAGTGGT+AGG - chr7_4:58095964-58095983 None:intergenic 45.0%
TACCACTTAGAAGAGACTGC+AGG + chr7_4:58095963-58095982 Msa1166090:intron 45.0%
ACCACTTAGAAGAGACTGCA+GGG + chr7_4:58095964-58095983 Msa1166090:intron 45.0%
AGCACGGACACCATAAGTAT+TGG + chr7_4:58096039-58096058 Msa1166090:intron 45.0%
ATCACTCCCCCTGAAATCAT+CGG + chr7_4:58096135-58096154 Msa1166090:intron 45.0%
GACCTCCCAATTGTGCATAA+TGG + chr7_4:58096176-58096195 Msa1166090:intron 45.0%
CCTCCCAATTGTGCATAATG+GGG + chr7_4:58096178-58096197 Msa1166090:intron 45.0%
ACCGGCAATGTTGTATGGTA+CGG + chr7_4:58096341-58096360 Msa1166090:intron 45.0%
TCCGTACCATACAACATTGC+CGG - chr7_4:58096345-58096364 None:intergenic 45.0%
TGTTGTATGGTACGGAGTGT+TGG + chr7_4:58096349-58096368 Msa1166090:intron 45.0%
! GTTGTATGGTACGGAGTGTT+GGG + chr7_4:58096350-58096369 Msa1166090:intron 45.0%
CGCTTACTTTACTCTCGTGT+TGG - chr7_4:58096386-58096405 None:intergenic 45.0%
CGAGAGTAAAGTAAGCGTAG+CGG + chr7_4:58096389-58096408 Msa1166090:intron 45.0%
CATCATTAGAGAGAGAGTGG+GGG + chr7_4:58096470-58096489 Msa1166090:intron 45.0%
AAATGGGAGCCTATGTAGCA+TGG - chr7_4:58096952-58096971 None:intergenic 45.0%
CAGAAAAGGTAGGGCTAAGA+GGG - chr7_4:58097092-58097111 None:intergenic 45.0%
GATGGTCACCAGAAAAGGTA+GGG - chr7_4:58097101-58097120 None:intergenic 45.0%
TGATGGTCACCAGAAAAGGT+AGG - chr7_4:58097102-58097121 None:intergenic 45.0%
TGGTGACCATCAACAAGTTG+TGG + chr7_4:58097110-58097129 Msa1166090:CDS 45.0%
GTTGATATAACGGTAGCTGC+TGG + chr7_4:58097168-58097187 Msa1166090:CDS 45.0%
TAGGGGTTACTAAAGCAAGG+AGG - chr7_4:58097258-58097277 None:intergenic 45.0%
!! GATCTGTCTCCTTTTGGGAA+AGG - chr7_4:58097290-58097309 None:intergenic 45.0%
! CATAGGGATCTGTCTCCTTT+TGG - chr7_4:58097296-58097315 None:intergenic 45.0%
TTTGATGGAGGTTCAAGCTC+TGG + chr7_4:58097844-58097863 Msa1166090:CDS 45.0%
!! GGTTCAAGCATTGATGGAGT+AGG + chr7_4:58097906-58097925 Msa1166090:intron 45.0%
GGAAACCATGGCAAAAACGA+TGG - chr7_4:58098221-58098240 None:intergenic 45.0%
TGATAGTAGCCTTCCGATTG+AGG + chr7_4:58098446-58098465 Msa1166090:CDS 45.0%
TGACATCCTGATTCTGGCAT+AGG - chr7_4:58098585-58098604 None:intergenic 45.0%
ATTGCAATGAATGACCAGGC+AGG - chr7_4:58098641-58098660 None:intergenic 45.0%
! GTGGTTTGTAGACTTGTAGG+AGG + chr7_4:58098771-58098790 Msa1166090:intron 45.0%
CTTAAGGCCCTGTCGAAAAT+TGG - chr7_4:58099431-58099450 None:intergenic 45.0%
!! GATCAGTGTCGATTGTGTCA+TGG + chr7_4:58099523-58099542 Msa1166090:three_prime_UTR 45.0%
!! ATCGAGAAGGTTCTGGAAGG+CGG - chr7_4:58095119-58095138 None:intergenic 50.0%
ACCCTGCAGTCTCTTCTAAG+TGG - chr7_4:58095968-58095987 None:intergenic 50.0%
ATGCACAATTGGGAGGTCAC+TGG - chr7_4:58096174-58096193 None:intergenic 50.0%
CCCCATTATGCACAATTGGG+AGG - chr7_4:58096181-58096200 None:intergenic 50.0%
GTCAGACCGGCAATGTTGTA+TGG + chr7_4:58096336-58096355 Msa1166090:intron 50.0%
! AAGTAAGCGTAGCGGAGATG+AGG + chr7_4:58096397-58096416 Msa1166090:intron 50.0%
AGGATGTTGCGTTGGATGAG+TGG + chr7_4:58096417-58096436 Msa1166090:intron 50.0%
TCTTCTTACCACGGCGTCTA+CGG - chr7_4:58096562-58096581 None:intergenic 50.0%
CTTATCCCACTAAGTGGGGT+CGG - chr7_4:58096736-58096755 None:intergenic 50.0%
! GAGCCTTATCCCACTAAGTG+GGG - chr7_4:58096740-58096759 None:intergenic 50.0%
! CGAGCCTTATCCCACTAAGT+GGG - chr7_4:58096741-58096760 None:intergenic 50.0%
CCACTTAGTGGGATAAGGCT+CGG + chr7_4:58096739-58096758 Msa1166090:intron 50.0%
! GCTCGGTTGTTGTTGTTGTC+TGG + chr7_4:58096756-58096775 Msa1166090:intron 50.0%
CCAGAAAAGGTAGGGCTAAG+AGG - chr7_4:58097093-58097112 None:intergenic 50.0%
! CCTCTTAGCCCTACCTTTTC+TGG + chr7_4:58097090-58097109 Msa1166090:CDS 50.0%
TGGTAAGGACTCTGTTGCAG+AGG + chr7_4:58097137-58097156 Msa1166090:CDS 50.0%
!! GACACATAGTTCTGGGCCTT+CGG - chr7_4:58097198-58097217 None:intergenic 50.0%
TGCAGCTACATTGCGTTGCA+GGG + chr7_4:58097224-58097243 Msa1166090:CDS 50.0%
GGGTTACTAAAGCAAGGAGG+AGG - chr7_4:58097255-58097274 None:intergenic 50.0%
ACGCAGTACACAGTTACAGC+TGG + chr7_4:58097728-58097747 Msa1166090:CDS 50.0%
! GTTCAAGCTCTGGCAGCATT+GGG + chr7_4:58097854-58097873 Msa1166090:CDS 50.0%
GGCTCCGAGTTATTAGCAGA+AGG + chr7_4:58098082-58098101 Msa1166090:CDS 50.0%
!! GTCGTCCATCGTTTTTGCCA+TGG + chr7_4:58098213-58098232 Msa1166090:intron 50.0%
AGTAGCCTTCCGATTGAGGA+AGG + chr7_4:58098450-58098469 Msa1166090:CDS 50.0%
CATCTCCTTCCTCAATCGGA+AGG - chr7_4:58098458-58098477 None:intergenic 50.0%
CGTGCATCTCCTTCCTCAAT+CGG - chr7_4:58098462-58098481 None:intergenic 50.0%
AGATGCACGTTATATGCCCC+AGG + chr7_4:58098473-58098492 Msa1166090:CDS 50.0%
AATGAATGACCAGGCAGGAG+TGG - chr7_4:58098636-58098655 None:intergenic 50.0%
AACCGGATCAGGATCGATCA+TGG - chr7_4:58099375-58099394 None:intergenic 50.0%
TCGATCCTGATCCGGTTAAG+AGG + chr7_4:58099378-58099397 Msa1166090:CDS 50.0%
TCTACCAACTCTCTGGCAGA+AGG - chr7_4:58099404-58099423 None:intergenic 50.0%
TGGGTTCTCTACCAACTCTC+TGG - chr7_4:58099411-58099430 None:intergenic 50.0%
! TAGACAGATGATGGTCCAGC+AGG - chr7_4:58099495-58099514 None:intergenic 50.0%
CACCTGATAATTCTCGCGCA+TGG + chr7_4:58099581-58099600 Msa1166090:three_prime_UTR 50.0%
CACCATGCGCGAGAATTATC+AGG - chr7_4:58099586-58099605 None:intergenic 50.0%
GTCTTTCTCTACCCAACTGG+AGG - chr7_4:58099735-58099754 None:intergenic 50.0%
!! GGAAGGAAGAAGGCACCACT+CGG + chr7_4:58095004-58095023 Msa1166090:CDS 55.0%
! CTTGTGTTACTCGCACCGAG+TGG - chr7_4:58095022-58095041 None:intergenic 55.0%
GGGCAAGGGCTATTATCCTG+CGG - chr7_4:58095494-58095513 None:intergenic 55.0%
TAGCCCTTGCCCTAAATCCC+CGG + chr7_4:58095502-58095521 Msa1166090:CDS 55.0%
! TCTCCGGGGATTTAGGGCAA+GGG - chr7_4:58095508-58095527 None:intergenic 55.0%
! TTCTCCGGGGATTTAGGGCA+AGG - chr7_4:58095509-58095528 None:intergenic 55.0%
CTATCGGACAGCAGTCAGAC+CGG + chr7_4:58096323-58096342 Msa1166090:intron 55.0%
!! GTATGGTACGGAGTGTTGGG+CGG + chr7_4:58096353-58096372 Msa1166090:intron 55.0%
CGGAGATGAGGATGTTGCGT+TGG + chr7_4:58096409-58096428 Msa1166090:intron 55.0%
CTTCTTACCACGGCGTCTAC+GGG - chr7_4:58096561-58096580 None:intergenic 55.0%
ACTAAGTGGGGTCGGCTACA+TGG - chr7_4:58096728-58096747 None:intergenic 55.0%
ATGTAGCCGACCCCACTTAG+TGG + chr7_4:58096727-58096746 Msa1166090:intron 55.0%
TGTAGCCGACCCCACTTAGT+GGG + chr7_4:58096728-58096747 Msa1166090:intron 55.0%
CGACCCCACTTAGTGGGATA+AGG + chr7_4:58096734-58096753 Msa1166090:intron 55.0%
! CCGAGCCTTATCCCACTAAG+TGG - chr7_4:58096742-58096761 None:intergenic 55.0%
CTGCAGCTACATTGCGTTGC+AGG + chr7_4:58097223-58097242 Msa1166090:CDS 55.0%
! GGTTCAAGCTCTGGCAGCAT+TGG + chr7_4:58097853-58097872 Msa1166090:CDS 55.0%
GGCCATGATCGATCCTGATC+CGG + chr7_4:58099370-58099389 Msa1166090:intron 55.0%
GAAGGCCTCTTAACCGGATC+AGG - chr7_4:58099386-58099405 None:intergenic 55.0%
CTGGCAGAAGGCCTCTTAAC+CGG - chr7_4:58099392-58099411 None:intergenic 55.0%
GGCTCCCATTTCCCACCACA+TGG + chr7_4:58096961-58096980 Msa1166090:intron 60.0%
GGTAGCTGCTGGTAAGCCGA+AGG + chr7_4:58097179-58097198 Msa1166090:CDS 60.0%
GAGGCCTTCTGCCAGAGAGT+TGG + chr7_4:58099397-58099416 Msa1166090:CDS 60.0%
GAGAAGACCCGTAGACGCCG+TGG + chr7_4:58096551-58096570 Msa1166090:intron 65.0%
GGCAAGTTGCCACTCCTGCC+TGG + chr7_4:58098624-58098643 Msa1166090:CDS 65.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 58094905 58099754 58094905 ID=Msa1166090;Name=Msa1166090
chr7_4 mRNA 58094905 58099754 58094905 ID=Msa1166090-mRNA-1;Parent=Msa1166090;Name=Msa1166090-mRNA-1;_AED=0.12;_eAED=0.12;_QI=72|1|1|1|1|1|10|288|487
chr7_4 exon 58094905 58095230 58094905 ID=Msa1166090-mRNA-1:exon:17738;Parent=Msa1166090-mRNA-1
chr7_4 exon 58095332 58095392 58095332 ID=Msa1166090-mRNA-1:exon:17739;Parent=Msa1166090-mRNA-1
chr7_4 exon 58095497 58095563 58095497 ID=Msa1166090-mRNA-1:exon:17740;Parent=Msa1166090-mRNA-1
chr7_4 exon 58097073 58097339 58097073 ID=Msa1166090-mRNA-1:exon:17741;Parent=Msa1166090-mRNA-1
chr7_4 exon 58097478 58097545 58097478 ID=Msa1166090-mRNA-1:exon:17742;Parent=Msa1166090-mRNA-1
chr7_4 exon 58097654 58097760 58097654 ID=Msa1166090-mRNA-1:exon:17743;Parent=Msa1166090-mRNA-1
chr7_4 exon 58097835 58097875 58097835 ID=Msa1166090-mRNA-1:exon:17744;Parent=Msa1166090-mRNA-1
chr7_4 exon 58097981 58098129 58097981 ID=Msa1166090-mRNA-1:exon:17745;Parent=Msa1166090-mRNA-1
chr7_4 exon 58098324 58098677 58098324 ID=Msa1166090-mRNA-1:exon:17746;Parent=Msa1166090-mRNA-1
chr7_4 exon 58099371 58099754 58099371 ID=Msa1166090-mRNA-1:exon:17747;Parent=Msa1166090-mRNA-1
chr7_4 five_prime_UTR 58094905 58094976 58094905 ID=Msa1166090-mRNA-1:five_prime_utr;Parent=Msa1166090-mRNA-1
chr7_4 CDS 58094977 58095230 58094977 ID=Msa1166090-mRNA-1:cds;Parent=Msa1166090-mRNA-1
chr7_4 CDS 58095332 58095392 58095332 ID=Msa1166090-mRNA-1:cds;Parent=Msa1166090-mRNA-1
chr7_4 CDS 58095497 58095563 58095497 ID=Msa1166090-mRNA-1:cds;Parent=Msa1166090-mRNA-1
chr7_4 CDS 58097073 58097339 58097073 ID=Msa1166090-mRNA-1:cds;Parent=Msa1166090-mRNA-1
chr7_4 CDS 58097478 58097545 58097478 ID=Msa1166090-mRNA-1:cds;Parent=Msa1166090-mRNA-1
chr7_4 CDS 58097654 58097760 58097654 ID=Msa1166090-mRNA-1:cds;Parent=Msa1166090-mRNA-1
chr7_4 CDS 58097835 58097875 58097835 ID=Msa1166090-mRNA-1:cds;Parent=Msa1166090-mRNA-1
chr7_4 CDS 58097981 58098129 58097981 ID=Msa1166090-mRNA-1:cds;Parent=Msa1166090-mRNA-1
chr7_4 CDS 58098324 58098677 58098324 ID=Msa1166090-mRNA-1:cds;Parent=Msa1166090-mRNA-1
chr7_4 CDS 58099371 58099466 58099371 ID=Msa1166090-mRNA-1:cds;Parent=Msa1166090-mRNA-1
chr7_4 three_prime_UTR 58099467 58099754 58099467 ID=Msa1166090-mRNA-1:three_prime_utr;Parent=Msa1166090-mRNA-1
Gene Sequence

>Msa1166090

ATGACGAGAAAAACCCCAAAATCAAGGGGAAGGAAGAAGGCACCACTCGGTGCGAGTAACACAAGACAGTTACAGCTTCAGCTCAGCAAATTCTCTTTCAAACAATACAAACCGTTACCAACAACGACTATAACTTCTTCCGCCTTCCAGAACCTTCTCGATTCAGAGACAAATCAAAATCCTTCCATTAGGGTTACCAATGATGCTACCGATGCTGATTCAAGAGATGGCATTCTTAGTCAAGATTTCTTCTGTACTCCAGATTACATAACTCCGGATAATCAGCGGATTTTGAACGGTATCGATTTCAATAAGGATAATAGCCCTTGCCCTAAATCCCCGGAGAAATTGAATACTACTAAAAGCAAAAGATGTCGACTGGATGGTGTCTCGGCAAACCCTCTTAGCCCTACCTTTTCTGGTGACCATCAACAAGTTGTGGAACTTGGTAAGGACTCTGTTGCAGAGGAAGTAGCTGTTGATATAACGGTAGCTGCTGGTAAGCCGAAGGCCCAGAACTATGTGTCACATTCTGCAGCTACATTGCGTTGCAGGGCTATACCTCCTCCTTGCTTTAGTAACCCCTATTTAAAGGACCTTTCCCAAAAGGAGACAGATCCCTATGCAAACCAAAGATCCAAATGTGCAGGTTTCTTCCCTAAATTTACAGCTTATGATGGGCTCTCACGCTATCGCACTGACTTTCATGAGATTGAGCAAATTGGTCGAGGGTACTTTAGTTGTGTTTTTAAAGTATTAAAGCGAATAGATGGCTGCTTGTATGCTGTGAAACGCAGTACACAGTTACAGCTGGATACAGAAAGGAGAAAAGCTTTGATGGAGGTTCAAGCTCTGGCAGCATTGGGTTACCATGAGAACATTGTGGGCTATTATACTTCATGGTTTGAAAACGAACAACTGTACATTCAGATGGAGATATGTGATCATAGCTTATCTGTAAACAAAGGCTCCGAGTTATTAGCAGAAGGACAAGTGTTAGAAGTTTTATATCAAGTTGCTAATGCACTGCGATTTATACACGACAAGGGAATAGCTCATCTTGATCTTAAACCTGATAATATTTATGTAAAAAATGGTGTCTATAAGCTTGGTGATTTTGGATGTGCAACTCTTACTGATAGTAGCCTTCCGATTGAGGAAGGAGATGCACGTTATATGCCCCAGGAAATCCTTAATGAGAATTATGACCACCTTGACAAGGTTGATATTTTCTCTTTGGGAGTTTCTATTTATCAACTCATCCGAAAATCACCTATGCCAGAATCAGGATGTCATTTTTTGAATCTTAAAGAAGGCAAGTTGCCACTCCTGCCTGGTCATTCATTGCAATTTCAAAACTTGCTCAAGGCCATGATCGATCCTGATCCGGTTAAGAGGCCTTCTGCCAGAGAGTTGGTAGAGAACCCAATTTTCGACAGGGCCTTAAGAACAGCGAAAAATTGA

Protein sequence

>Msa1166090

MTRKTPKSRGRKKAPLGASNTRQLQLQLSKFSFKQYKPLPTTTITSSAFQNLLDSETNQNPSIRVTNDATDADSRDGILSQDFFCTPDYITPDNQRILNGIDFNKDNSPCPKSPEKLNTTKSKRCRLDGVSANPLSPTFSGDHQQVVELGKDSVAEEVAVDITVAAGKPKAQNYVSHSAATLRCRAIPPPCFSNPYLKDLSQKETDPYANQRSKCAGFFPKFTAYDGLSRYRTDFHEIEQIGRGYFSCVFKVLKRIDGCLYAVKRSTQLQLDTERRKALMEVQALAALGYHENIVGYYTSWFENEQLYIQMEICDHSLSVNKGSELLAEGQVLEVLYQVANALRFIHDKGIAHLDLKPDNIYVKNGVYKLGDFGCATLTDSSLPIEEGDARYMPQEILNENYDHLDKVDIFSLGVSIYQLIRKSPMPESGCHFLNLKEGKLPLLPGHSLQFQNLLKAMIDPDPVKRPSARELVENPIFDRALRTAKN*