AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1146230

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1146230 MtrunA17_Chr7g0233311 85.386 609 89 0 1 609 1 609 0.0 1073
Msa1146230 MtrunA17_Chr7g0233301 76.117 649 93 2 1 649 1 587 0.0 986
Msa1146230 MtrunA17_Chr2g0298851 75.082 610 149 3 1 609 1 608 0.0 956
Msa1146230 MtrunA17_Chr2g0293581 72.951 610 164 1 1 609 1 610 0.0 936
Msa1146230 MtrunA17_Chr7g0221661 72.578 609 165 2 1 609 1 607 0.0 929
Msa1146230 MtrunA17_Chr4g0040931 73.191 608 162 1 1 608 1 607 0.0 926
Msa1146230 MtrunA17_Chr7g0223721 72.414 609 167 1 1 609 1 608 0.0 923
Msa1146230 MtrunA17_Chr2g0298861 71.061 622 165 4 1 609 1 620 0.0 919
Msa1146230 MtrunA17_Chr5g0427901 71.935 620 161 3 1 609 1 618 0.0 914
Msa1146230 MtrunA17_Chr7g0225671 71.732 612 168 4 9 618 16 624 0.0 907
Msa1146230 MtrunA17_Chr7g0223851 70.968 620 176 3 1 618 10 627 0.0 905
Msa1146230 MtrunA17_Chr2g0287631 71.921 609 171 0 1 609 1 609 0.0 897
Msa1146230 MtrunA17_Chr7g0223801 69.951 609 179 3 1 609 1 605 0.0 885
Msa1146230 MtrunA17_Chr7g0217971 69.818 603 155 3 1 603 1 576 0.0 874
Msa1146230 MtrunA17_Chr7g0223821 69.044 617 177 5 1 609 1 611 0.0 852
Msa1146230 MtrunA17_Chr7g0223821 52.632 76 34 1 534 607 620 695 1.05e-13 75.1
Msa1146230 MtrunA17_Chr4g0012541 67.258 620 190 4 1 618 1 609 0.0 846
Msa1146230 MtrunA17_Chr2g0296391 74.432 528 135 0 1 528 1 528 0.0 829
Msa1146230 MtrunA17_Chr7g0215261 67.705 610 159 5 1 608 1 574 0.0 829
Msa1146230 MtrunA17_Chr7g0223831 67.816 609 165 4 1 608 1 579 0.0 828
Msa1146230 MtrunA17_Chr7g0223711 64.532 609 214 2 1 609 1 607 0.0 827
Msa1146230 MtrunA17_Chr7g0223181 66.230 610 202 3 1 609 1 607 0.0 825
Msa1146230 MtrunA17_Chr8g0350731 65.353 609 208 2 1 609 29 634 0.0 820
Msa1146230 MtrunA17_Chr4g0031321 65.517 609 206 3 1 608 1 606 0.0 819
Msa1146230 MtrunA17_Chr4g0031301 65.517 609 206 3 1 608 1 606 0.0 817
Msa1146230 MtrunA17_Chr7g0223751 64.309 608 214 2 1 608 1 605 0.0 817
Msa1146230 MtrunA17_Chr7g0228281 65.267 619 168 4 1 618 62 634 0.0 813
Msa1146230 MtrunA17_Chr7g0262821 65.025 609 209 3 1 608 1 606 0.0 813
Msa1146230 MtrunA17_Chr7g0223291 65.246 610 208 3 1 609 1 607 0.0 813
Msa1146230 MtrunA17_Chr7g0223621 63.875 609 217 2 1 609 1 606 0.0 812
Msa1146230 MtrunA17_Chr8g0390821 62.840 662 176 8 1 609 1 645 0.0 811
Msa1146230 MtrunA17_Chr7g0223031 64.039 609 216 2 1 609 1 606 0.0 811
Msa1146230 MtrunA17_Chr7g0223741 65.424 590 203 1 1 590 1 589 0.0 804
Msa1146230 MtrunA17_Chr7g0223781 64.696 609 211 3 1 609 1 605 0.0 800
Msa1146230 MtrunA17_Chr7g0223731 62.993 608 222 2 1 608 1 605 0.0 796
Msa1146230 MtrunA17_Chr7g0248151 64.590 610 212 3 1 608 1 608 0.0 785
Msa1146230 MtrunA17_Chr7g0248131 63.072 612 220 5 1 608 1 610 0.0 781
Msa1146230 MtrunA17_Chr4g0073741 62.562 609 223 4 1 608 1 605 0.0 779
Msa1146230 MtrunA17_Chr7g0223701 62.075 617 224 5 1 609 1 615 0.0 779
Msa1146230 MtrunA17_Chr7g0223631 63.547 609 205 4 1 609 1 592 0.0 772
Msa1146230 MtrunA17_Chr2g0293601 68.786 519 128 1 1 519 1 485 0.0 739
Msa1146230 MtrunA17_Chr2g0331381 64.378 539 129 3 10 548 7 482 0.0 707
Msa1146230 MtrunA17_Chr6g0462681 58.446 592 242 3 1 591 1 589 0.0 694
Msa1146230 MtrunA17_Chr7g0223541 62.313 536 200 2 74 609 31 564 0.0 689
Msa1146230 MtrunA17_Chr7g0223681 63.776 519 185 2 91 609 2 517 0.0 684
Msa1146230 MtrunA17_Chr6g0462601 58.179 593 242 5 1 591 1 589 0.0 677
Msa1146230 MtrunA17_Chr1g0166551 58.017 605 140 5 6 609 2 493 0.0 676
Msa1146230 MtrunA17_Chr6g0462711 55.872 596 255 4 9 598 10 603 0.0 654
Msa1146230 MtrunA17_Chr2g0293561 80.481 374 73 0 1 374 1 374 0.0 651
Msa1146230 MtrunA17_Chr2g0284681 57.932 561 227 4 9 562 8 566 0.0 642
Msa1146230 MtrunA17_Chr6g0462641 52.019 644 282 6 1 620 1 641 0.0 637
Msa1146230 MtrunA17_Chr8g0388761 54.762 588 257 6 7 591 36 617 0.0 635
Msa1146230 MtrunA17_Chr8g0388671 54.932 588 256 6 7 591 36 617 0.0 633
Msa1146230 MtrunA17_Chr6g0462771 55.348 589 254 4 9 591 9 594 0.0 628
Msa1146230 MtrunA17_Chr6g0462611 55.405 518 229 2 74 591 22 537 0.0 576
Msa1146230 MtrunA17_Chr2g0299821 64.557 395 136 2 1 393 1 393 0.0 529
Msa1146230 MtrunA17_Chr2g0299821 39.333 150 61 6 411 536 337 480 7.56e-17 84.3
Msa1146230 MtrunA17_Chr2g0293271 60.641 437 102 3 21 457 43 409 4.12e-180 521
Msa1146230 MtrunA17_Chr2g0299921 68.101 395 122 2 2 396 1022 1412 2.48e-179 559
Msa1146230 MtrunA17_Chr2g0299921 67.179 390 123 3 2 390 1406 1791 4.79e-166 523
Msa1146230 MtrunA17_Chr2g0299851 66.667 390 126 2 1 390 1030 1415 2.83e-177 545
Msa1146230 MtrunA17_Chr2g0299791 67.095 389 124 2 1 389 1034 1418 2.31e-176 543
Msa1146230 MtrunA17_Chr1g0151991 79.038 291 61 0 1 291 1 291 1.19e-168 486
Msa1146230 MtrunA17_Chr2g0299881 65.974 385 123 3 9 389 1038 1418 1.04e-165 516
Msa1146230 MtrunA17_Chr2g0299881 56.164 73 30 1 180 250 1403 1475 2.68e-17 87.0
Msa1146230 MtrunA17_Chr2g0279901 46.379 580 283 11 10 582 57 615 1.90e-163 488
Msa1146230 MtrunA17_Chr6g0462861 45.691 615 300 12 6 609 6 597 3.03e-163 486
Msa1146230 MtrunA17_Chr7g0245521 79.121 273 57 0 1 273 1 273 6.38e-158 458
Msa1146230 MtrunA17_Chr4g0049501 45.017 582 289 12 10 582 54 613 6.77e-156 468
Msa1146230 MtrunA17_Chr7g0245531 72.459 305 82 2 305 609 2 304 1.40e-154 451
Msa1146230 MtrunA17_Chr2g0277021 45.341 558 285 9 10 562 72 614 2.02e-151 458
Msa1146230 MtrunA17_Chr7g0223761 60.541 370 102 3 241 609 3 329 7.67e-148 436
Msa1146230 MtrunA17_Chr1g0152001 66.102 295 97 2 315 609 1 292 8.07e-134 399
Msa1146230 MtrunA17_Chr1g0188611 63.194 288 98 2 322 609 1 280 2.78e-110 337
Msa1146230 MtrunA17_Chr1g0188601 81.152 191 36 0 92 282 1 191 2.45e-107 325
Msa1146230 MtrunA17_Chr7g0223671 72.340 188 52 0 74 261 8 195 7.78e-97 298
Msa1146230 MtrunA17_Chr6g0462751 48.555 346 118 4 67 409 12 300 8.39e-97 303
Msa1146230 MtrunA17_Chr6g0462631 51.757 313 108 3 100 411 22 292 1.28e-96 301
Msa1146230 MtrunA17_Chr7g0223771 78.431 153 33 0 93 245 1 153 1.87e-84 265
Msa1146230 MtrunA17_Chr5g0394391 35.189 503 300 14 9 495 29 521 1.54e-79 266
Msa1146230 MtrunA17_Chr7g0245541 63.212 193 69 2 417 609 1 191 4.89e-77 246
Msa1146230 MtrunA17_Chr4g0004331 31.568 472 303 8 10 466 4 470 1.18e-73 256
Msa1146230 MtrunA17_Chr7g0223861 82.443 131 23 0 78 208 4 134 1.53e-73 234
Msa1146230 MtrunA17_Chr4g0046881 78.014 141 28 1 135 275 14 151 1.17e-71 230
Msa1146230 MtrunA17_Chr2g0331901 32.000 450 287 7 10 445 4 448 1.68e-71 250
Msa1146230 MtrunA17_Chr3g0098761 31.034 464 312 7 10 472 4 460 7.91e-69 241
Msa1146230 MtrunA17_Chr6g0462791 61.364 176 67 1 108 283 1 175 1.67e-68 223
Msa1146230 MtrunA17_Chr5g0444001 32.326 430 279 6 10 432 4 428 3.85e-68 234
Msa1146230 MtrunA17_Chr4g0064621 33.333 513 300 17 9 492 140 639 8.81e-56 203
Msa1146230 MtrunA17_Chr5g0394221 39.527 296 160 6 299 588 69 351 1.72e-55 194
Msa1146230 MtrunA17_Chr3g0120101 27.203 522 340 12 12 499 29 544 2.09e-55 204
Msa1146230 MtrunA17_Chr6g0481391 69.672 122 34 1 38 159 13 131 3.52e-52 177
Msa1146230 MtrunA17_Chr6g0462701 53.216 171 56 1 100 270 22 168 1.62e-51 177
Msa1146230 MtrunA17_Chr4g0046871 77.778 99 22 0 339 437 9 107 2.88e-47 162
Msa1146230 MtrunA17_Chr4g0060241 28.265 513 316 15 10 497 21 506 7.15e-46 172
Msa1146230 MtrunA17_Chr5g0442171 33.735 332 194 11 170 488 1 319 1.76e-41 154
Msa1146230 MtrunA17_Chr6g0462691 53.521 142 65 1 322 462 1 142 2.60e-41 148
Msa1146230 MtrunA17_Chr1g0188591 84.932 73 11 0 1 73 1 73 1.53e-37 135
Msa1146230 MtrunA17_Chr5g0394231 36.404 228 92 5 74 299 5 181 3.75e-37 137
Msa1146230 MtrunA17_Chr7g0223691 78.082 73 16 0 1 73 1 73 7.10e-34 124
Msa1146230 MtrunA17_Chr7g0223871 51.562 128 61 1 492 618 7 134 1.65e-33 125
Msa1146230 MtrunA17_Chr6g0481381 72.973 74 20 0 176 249 1 74 1.35e-32 124
Msa1146230 MtrunA17_Chr6g0481381 46.324 136 63 2 480 609 37 168 2.16e-28 112
Msa1146230 MtrunA17_Chr7g0223791 49.593 123 52 2 450 572 67 179 7.47e-30 116
Msa1146230 MtrunA17_Chr7g0223791 63.415 82 22 3 56 137 18 91 2.95e-25 103
Msa1146230 MtrunA17_Chr7g0223881 63.855 83 29 1 281 363 2 83 1.25e-28 109
Msa1146230 MtrunA17_Chr6g0462621 67.123 73 22 1 1 73 1 71 5.27e-27 104
Msa1146230 MtrunA17_Chr7g0223661 43.103 116 23 1 315 430 1 73 9.93e-21 87.0
Msa1146230 MtrunA17_Chr7g0221651 46.429 84 45 0 215 298 1 84 3.59e-19 82.8
Msa1146230 MtrunA17_Chr6g0462801 59.091 66 22 1 322 382 1 66 2.62e-17 77.0
Msa1146230 MtrunA17_Chr5g0442161 33.333 156 91 4 9 157 28 177 5.17e-17 79.7
Msa1146230 MtrunA17_Chr2g0299891 74.419 43 11 0 315 357 1 43 3.16e-16 73.9
Msa1146230 MtrunA17_Chr2g0284661 53.012 83 38 1 368 449 61 143 1.14e-15 74.7
Msa1146230 MtrunA17_Chr4g0064651 41.053 95 54 2 397 491 29 121 3.07e-14 70.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1146230 AT3G12580.1 64.590 610 212 3 1 609 1 607 0.0 810
Msa1146230 AT5G02500.1 64.098 610 215 3 1 609 1 607 0.0 808
Msa1146230 AT3G09440.1 63.607 610 218 3 1 609 1 607 0.0 798
Msa1146230 AT3G09440.4 63.607 610 218 3 1 609 1 607 0.0 798
Msa1146230 AT3G09440.2 63.607 610 218 3 1 609 1 607 0.0 798
Msa1146230 AT3G09440.3 63.607 610 218 3 1 609 1 607 0.0 798
Msa1146230 AT5G02490.1 63.607 610 218 3 1 609 1 607 0.0 796
Msa1146230 AT1G56410.1 64.098 610 213 4 1 609 1 605 0.0 790
Msa1146230 AT1G16030.1 61.905 609 227 4 1 608 1 605 0.0 771
Msa1146230 AT5G28540.1 55.207 605 261 7 7 608 35 632 0.0 644
Msa1146230 AT5G42020.1 55.041 605 262 7 7 608 35 632 0.0 643
Msa1146230 AT5G42020.3 55.041 605 262 7 7 608 40 637 0.0 642
Msa1146230 AT1G09080.2 54.801 604 264 6 7 608 40 636 0.0 627
Msa1146230 AT1G09080.1 54.801 604 264 6 7 608 50 646 0.0 627
Msa1146230 AT5G02500.2 73.265 389 102 1 1 389 1 387 0.0 612
Msa1146230 AT5G42020.2 58.628 481 191 5 7 485 35 509 0.0 558
Msa1146230 AT5G09590.1 45.423 579 289 11 10 581 60 618 1.54e-154 465
Msa1146230 AT4G37910.1 46.034 580 286 11 10 582 55 614 6.15e-152 459
Msa1146230 AT4G37910.2 46.034 580 286 11 10 582 55 614 6.15e-152 459
Msa1146230 AT4G24280.1 44.503 573 296 10 10 577 81 636 9.32e-151 457
Msa1146230 AT5G49910.1 45.161 558 286 9 10 562 81 623 1.90e-148 451
Msa1146230 AT2G32120.1 33.074 514 313 10 9 509 30 525 6.02e-74 251
Msa1146230 AT2G32120.2 33.074 514 313 10 9 509 30 525 6.02e-74 251
Msa1146230 AT1G79930.2 31.789 475 304 8 10 469 4 473 6.96e-74 256
Msa1146230 AT1G79920.1 32.000 475 303 8 10 469 4 473 1.05e-73 254
Msa1146230 AT1G79920.3 32.000 475 303 8 10 469 4 473 1.32e-73 254
Msa1146230 AT1G79920.2 32.000 475 303 8 10 469 4 473 1.32e-73 254
Msa1146230 AT1G79920.4 32.000 475 303 8 10 469 4 473 1.32e-73 254
Msa1146230 AT1G79930.1 31.789 475 304 8 10 469 4 473 1.73e-73 256
Msa1146230 AT1G11660.4 29.636 604 361 14 10 560 4 596 4.89e-71 248
Msa1146230 AT1G11660.3 29.636 604 361 14 10 560 4 596 4.89e-71 248
Msa1146230 AT1G11660.1 29.636 604 361 14 10 560 4 596 4.89e-71 248
Msa1146230 AT1G11660.2 29.930 568 336 13 46 560 1 559 4.26e-64 228
Msa1146230 AT4G16660.2 26.775 493 334 8 6 475 47 535 1.24e-56 209
Msa1146230 AT4G16660.1 26.775 493 334 8 6 475 23 511 1.59e-56 208

Find 150 sgRNAs with CRISPR-Local

Find 325 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTGGTTCTTTCACTCTTTC+TGG -0.002130 7_4:+23420705 Msa1146230:CDS
CTCAACCTCCTTAGGGCTTT+TGG 0.111076 7_4:-23420111 None:intergenic
AAGAATCCCCTTGCGAATTT+TGG 0.141626 7_4:+23423368 Msa1146230:CDS
TGAGGTCGATGCTTTGTTTC+AGG 0.236745 7_4:+23420188 Msa1146230:CDS
TCCTTGTTGGTGGATCTTCT+AGG 0.261802 7_4:+23420346 Msa1146230:CDS
GCAACTGACAATCATCTTCT+TGG 0.285764 7_4:+23420687 Msa1146230:CDS
GCACACGAATTCTGTGACTA+TGG 0.300326 7_4:+23423455 Msa1146230:CDS
ACAGATGCCAAGAGGCTAAT+TGG 0.308993 7_4:+23419535 Msa1146230:intron
TGCAATAGTTGCTGCACTTT+CGG 0.310677 7_4:-23420372 None:intergenic
AGAGATTGCAGAGGCTTATC+TGG 0.317437 7_4:+23419720 Msa1146230:CDS
AAAATTCGCAAGGGGATTCT+TGG 0.319513 7_4:-23423366 None:intergenic
ACGCAGTTCTCAACCTCCTT+AGG 0.321307 7_4:-23420119 None:intergenic
ACATCAATCAACACCAAGTT+TGG 0.331418 7_4:-23420504 None:intergenic
TTCGGTACGTGGTACGAATT+CGG 0.337618 7_4:+23422882 Msa1146230:CDS
TGTGTCTCTTCTTACAATTA+AGG 0.339763 7_4:+23419960 Msa1146230:CDS
CCTGATGAGGCTGTTGCTTA+TGG 0.340665 7_4:+23420435 Msa1146230:CDS
ATAGATGCTGGTGTCATTGC+TGG 0.352626 7_4:+23419811 Msa1146230:CDS
AAATGAAAGTGATGTTCTTC+AGG 0.352646 7_4:+23421100 Msa1146230:CDS
GAATGAAATTGATGTTCTTA+AGG 0.363141 7_4:+23422597 Msa1146230:CDS
AACCCAGAAAACACTGTCTT+TGG 0.366090 7_4:+23418599 Msa1146230:CDS
TGCTTATGGTGCTGCTGTCC+AGG 0.371749 7_4:+23420449 Msa1146230:CDS
TGCTTTGTTGTCGATCAAAA+TGG 0.371961 7_4:+23420768 Msa1146230:CDS
TGTTGAGGAAATCTCATCTA+TGG 0.372495 7_4:+23419681 Msa1146230:CDS
GTTGATGATATTGTCCTTGT+TGG 0.375136 7_4:+23420333 Msa1146230:CDS
AGCAATGACACCAGCATCTA+TGG 0.384494 7_4:-23419809 None:intergenic
CCATAAGCAACAGCCTCATC+AGG 0.392319 7_4:-23420435 None:intergenic
CGACAACCTTCCTTTGTCAT+TGG 0.392830 7_4:-23420850 None:intergenic
CGCAGTTCTCAACCTCCTTA+GGG 0.394218 7_4:-23420118 None:intergenic
CTGCGTGCGAGAAGGCAAAA+AGG 0.396025 7_4:+23420136 Msa1146230:CDS
CTGGTGGAAACACTCACCTT+GGG 0.401415 7_4:+23420007 Msa1146230:CDS
GAAAGTGCAGCAACTATTGC+AGG 0.402990 7_4:+23420374 Msa1146230:CDS
TCTTCTTACAATTAAGGATA+AGG 0.404002 7_4:+23419966 Msa1146230:CDS
ACATACTCTCAAGCTCGTTC+AGG 0.409050 7_4:-23422624 None:intergenic
AATTGTTCCGTCTTCTTGAC+AGG 0.410522 7_4:-23420600 None:intergenic
TTCGCCACTCTTAAAGAATT+CGG 0.416636 7_4:+23422913 Msa1146230:CDS
TCGGTACGTGGTACGAATTC+GGG 0.416884 7_4:+23422883 Msa1146230:CDS
CGTCAAGAATGTTCCAAACT+TGG 0.417097 7_4:+23420491 Msa1146230:CDS
GGATAAGGTCTTCGAAGTTA+AGG 0.423231 7_4:+23419981 Msa1146230:CDS
TGGCCATTCAAAGTCATTGC+GGG 0.433971 7_4:+23419601 Msa1146230:CDS
GGATGGCCATGAGCAGCTGC+AGG 0.439135 7_4:-23420735 None:intergenic
TTCGCGGTACTTTCACGAAC+CGG 0.444890 7_4:-23423395 None:intergenic
AATCTCTCGTGCAAAGTTTG+AGG 0.447581 7_4:+23420230 Msa1146230:CDS
CTTCCTACCAATTAGCCTCT+TGG 0.451481 7_4:-23419542 None:intergenic
TCTCCATGCACTCATCAAAA+AGG 0.453902 7_4:-23420266 None:intergenic
GAACTGACTGTGATGGTAAA+CGG 0.453960 7_4:+23419899 Msa1146230:CDS
AATTTCATTCTGATGATCAC+TGG 0.455647 7_4:-23422584 None:intergenic
ACAACAAAGCATACATCAAA+AGG 0.457047 7_4:-23420756 None:intergenic
ACACCCGCAATGACTTTGAA+TGG 0.458605 7_4:-23419604 None:intergenic
ACAGGAATGGAAGTGTTCCT+TGG 0.460432 7_4:-23420582 None:intergenic
GAGATTATTCACAATGATCA+AGG 0.460749 7_4:+23418494 Msa1146230:CDS
GAGGTCGATGCTTTGTTTCA+GGG 0.461220 7_4:+23420189 Msa1146230:CDS
ATCAAGCAAATTTGCGGCCA+CGG 0.463692 7_4:-23421063 None:intergenic
ACTCAAGAGGAACGGCTGAT+TGG 0.465061 7_4:+23418548 Msa1146230:CDS
TTTGTCTTTGACCTTGGTGG+TGG 0.469354 7_4:+23419928 Msa1146230:CDS
GATGATATTGTCCTTGTTGG+TGG 0.469720 7_4:+23420336 Msa1146230:CDS
ACACAGTTCGCAATTCGCTT+CGG 0.472038 7_4:+23422864 Msa1146230:CDS
GATGTCGCACCACTGTCTCT+TGG 0.472659 7_4:+23420522 Msa1146230:CDS
GAACCCGGTTTGCGGTTCTC+AGG 0.476016 7_4:+23423429 Msa1146230:CDS
GTTCGTGCGAACCCGGTTTG+CGG 0.482186 7_4:+23423421 Msa1146230:CDS
GAGGCTTACCGTATCGATGA+TGG 0.482339 7_4:+23420906 Msa1146230:CDS
CTAGCCTGAGAACCGCAAAC+CGG 0.483101 7_4:-23423433 None:intergenic
ACTGCTGCAGCTATTGCATA+TGG 0.483888 7_4:+23419865 Msa1146230:CDS
TGTCTTCATTAATGTCTATG+AGG 0.484167 7_4:+23420650 Msa1146230:CDS
TATGCCATTGGAATAGATCT+TGG 0.487768 7_4:+23418422 Msa1146230:CDS
ATTCTCATCAAGCAAATTTG+CGG 0.488444 7_4:-23421069 None:intergenic
GGCTGAAGTCATGAATGCTC+TGG 0.489484 7_4:+23420944 Msa1146230:CDS
TTGTCTTTGACCTTGGTGGT+GGG 0.491381 7_4:+23419929 Msa1146230:CDS
AGAGGACTTTGATAATAGAA+TGG 0.500038 7_4:+23420032 Msa1146230:CDS
TTCGTGAAAGTACCGCGAAC+CGG 0.501658 7_4:+23423399 Msa1146230:CDS
TTCCGTCTTCTTGACAGGAA+TGG 0.502713 7_4:-23420595 None:intergenic
AAAGTTTGAGGAGATCAATA+TGG 0.505480 7_4:+23420242 Msa1146230:CDS
GAACGCTGTCATTACTGTGC+CGG 0.508598 7_4:+23419756 Msa1146230:CDS
TCGCAATTCGCTTCGGTACG+TGG 0.510370 7_4:+23422871 Msa1146230:CDS
CAAACCGGGTTCGCACGAAC+CGG 0.515677 7_4:-23423418 None:intergenic
CGAACCGGTTCGTGCGAACC+CGG 0.516524 7_4:+23423414 Msa1146230:CDS
TGAGAATCGTTGAAATAAGC+CGG 0.522121 7_4:-23419775 None:intergenic
GTCTTCGAAGTTAAGGCCAC+TGG 0.522470 7_4:+23419988 Msa1146230:CDS
TGAGTGAAAGCAACAAAAGA+AGG 0.527119 7_4:-23418530 None:intergenic
GGTTCGCACGAACCGGTTCG+CGG 0.529428 7_4:-23423411 None:intergenic
GAGAAATGTGTTGAAGAAGA+AGG 0.531211 7_4:+23420986 Msa1146230:CDS
TCGCACCACTGTCTCTTGGT+TGG 0.536532 7_4:+23420526 Msa1146230:CDS
ACTGGTGGAAACACTCACCT+TGG 0.538678 7_4:+23420006 Msa1146230:CDS
GTGATCCTGCTCTTGAAAAG+AGG 0.539520 7_4:-23423281 None:intergenic
TGATGGGAAATTCTTGAGAA+AGG 0.545073 7_4:+23420923 Msa1146230:CDS
TTGTACTTGAGAGAAATCAT+TGG 0.545385 7_4:-23419637 None:intergenic
AACTAATTAAGAGATTGCCT+AGG 0.546434 7_4:-23423307 None:intergenic
AAGGTGAGTGTTTCCACCAG+TGG 0.547001 7_4:-23420004 None:intergenic
AGAAAAGCCACCATAGATGC+TGG 0.548590 7_4:+23419799 Msa1146230:CDS
TGCTGTTGTCACCAATGTTG+AGG 0.549124 7_4:+23420170 Msa1146230:CDS
CTTAAAGAATTCGGTACGCA+AGG 0.551926 7_4:+23422922 Msa1146230:CDS
AAAGATGAAGGATATGCCAT+TGG 0.553215 7_4:+23418410 Msa1146230:CDS
TAGCCTGAGAACCGCAAACC+GGG 0.554853 7_4:-23423432 None:intergenic
TATGCAATAGCTGCAGCAGT+TGG 0.558562 7_4:-23419862 None:intergenic
TTAAAGAATTCGGTACGCAA+GGG 0.560863 7_4:+23422923 Msa1146230:CDS
AAGATTGATTGAAGAAGCTG+AGG 0.562890 7_4:+23420887 Msa1146230:CDS
AAGAGCAGGATCACTTCCCT+AGG 0.566701 7_4:+23423290 Msa1146230:CDS
AATGATTTCTCTCAAGTACA+AGG 0.566715 7_4:+23419639 Msa1146230:CDS
AGGCTTACCGTATCGATGAT+GGG 0.568194 7_4:+23420907 Msa1146230:CDS
AGAATTTCCCATCATCGATA+CGG 0.568365 7_4:-23420914 None:intergenic
TTGCTTTCACTCAAGAGGAA+CGG 0.568688 7_4:+23418540 Msa1146230:CDS
ACTAATTAAGAGATTGCCTA+GGG 0.571438 7_4:-23423306 None:intergenic
ATGGCCATGAGCAGCTGCAG+GGG 0.575948 7_4:-23420733 None:intergenic
TTCGAAGTTAAGGCCACTGG+TGG 0.576585 7_4:+23419991 Msa1146230:CDS
GAGCTCGTTCTTACTGCCAG+TGG 0.577454 7_4:-23420820 None:intergenic
AGAGGCTTATCTGGAATCGC+AGG 0.579338 7_4:+23419729 Msa1146230:CDS
CAAAGCATCGACCTCAACAT+TGG 0.580273 7_4:-23420181 None:intergenic
GATGGCCATGAGCAGCTGCA+GGG 0.581508 7_4:-23420734 None:intergenic
AGAGAGGAACTTCTGTGTTG+AGG 0.582856 7_4:+23419666 Msa1146230:CDS
TCTGCTATGGACAAATCCAC+TGG 0.583359 7_4:+23420804 Msa1146230:CDS
CCGGTTCGCCAAAATTCGCA+AGG 0.584017 7_4:-23423376 None:intergenic
CGTACCGAATTCTTTAAGAG+TGG 0.591405 7_4:-23422917 None:intergenic
GTTGAGAACTGCGTGCGAGA+AGG 0.591918 7_4:+23420128 Msa1146230:CDS
TCCTGCTCTTGAAAAGAGGA+AGG 0.593075 7_4:-23423277 None:intergenic
TTGGGAACCCAAAAGCCCTA+AGG 0.593146 7_4:+23420103 Msa1146230:CDS
GAAGTTAATACATGATGTCA+TGG 0.595996 7_4:+23420548 Msa1146230:CDS
TCATGGCTGTGGTGATTCCA+AGG 0.596706 7_4:+23420565 Msa1146230:CDS
TGGTGGAAACACTCACCTTG+GGG 0.601557 7_4:+23420008 Msa1146230:CDS
CAATAACCAATGACAAAGGA+AGG 0.604185 7_4:+23420844 Msa1146230:CDS
ATGCCAAGAGGCTAATTGGT+AGG 0.605854 7_4:+23419539 Msa1146230:CDS
GTATGAGCACATTATAGCCA+AGG 0.608449 7_4:+23422645 Msa1146230:CDS
GTCTTCATTAATGTCTATGA+GGG 0.610287 7_4:+23420651 Msa1146230:CDS
TTTCACTCAACAAAGCAGCC+TGG 0.611435 7_4:-23420467 None:intergenic
TGGCCATGAGCAGCTGCAGG+GGG 0.614624 7_4:-23420732 None:intergenic
TTCCATTCCTGTCAAGAAGA+CGG 0.616384 7_4:+23420593 Msa1146230:CDS
TAGGAAGTTTAGTGATCCTG+TGG 0.621561 7_4:+23419558 Msa1146230:CDS
CAAGAGCATCAACCCTGATG+AGG 0.622368 7_4:+23420422 Msa1146230:CDS
CGGTTCGCCAAAATTCGCAA+GGG 0.623909 7_4:-23423375 None:intergenic
CAAAGCATACATCAAAAGGA+TGG 0.627970 7_4:-23420752 None:intergenic
GAAAAGAGAACTGACTGTGA+TGG 0.633914 7_4:+23419892 Msa1146230:CDS
CATAAGCAACAGCCTCATCA+GGG 0.634330 7_4:-23420434 None:intergenic
TAAAGAATTCGGTACGCAAG+GGG 0.636769 7_4:+23422924 Msa1146230:CDS
GGAACCCAAAAGCCCTAAGG+AGG 0.640087 7_4:+23420106 Msa1146230:CDS
AATACATGATGTCATGGCTG+TGG 0.643033 7_4:+23420554 Msa1146230:CDS
GGTTCGCCAAAATTCGCAAG+GGG 0.645163 7_4:-23423374 None:intergenic
AGTACCAAGATCTATTCCAA+TGG 0.647070 7_4:-23418426 None:intergenic
GTGGCCATTCAAAGTCATTG+CGG 0.653981 7_4:+23419600 Msa1146230:CDS
CGTACTCTTGTGTTGCTGTG+TGG 0.655627 7_4:+23418450 Msa1146230:CDS
TCCTAGAAGATCCACCAACA+AGG 0.665374 7_4:-23420347 None:intergenic
AATGACACCAGCATCTATGG+TGG 0.667765 7_4:-23419806 None:intergenic
CTCACAATAACCAATGACAA+AGG 0.673901 7_4:+23420840 Msa1146230:CDS
GGTGGAAACACTCACCTTGG+GGG 0.675471 7_4:+23420009 Msa1146230:CDS
TCAAGTACAAGGGACAAGAG+AGG 0.685486 7_4:+23419650 Msa1146230:CDS
AACTTCCAACCAAGAGACAG+TGG 0.687062 7_4:-23420531 None:intergenic
ATGATTTCTCTCAAGTACAA+GGG 0.695142 7_4:+23419640 Msa1146230:CDS
AAAGAATTCGGTACGCAAGG+GGG 0.696564 7_4:+23422925 Msa1146230:CDS
CATCAAAAGTCCCACCACCA+AGG 0.703356 7_4:-23419939 None:intergenic
GTGGTACGAATTCGGGTACG+CGG 0.717218 7_4:+23422890 Msa1146230:CDS
AGTGCATGGAGACTGTTGAG+AGG 0.720195 7_4:+23420277 Msa1146230:CDS
GATCAATACTGCAATTACCG+TGG 0.726915 7_4:+23421046 Msa1146230:CDS
AAAGATGCGAGAGATTGCAG+AGG 0.728184 7_4:+23419711 Msa1146230:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTTTTGTATTTTTGTTTT+CGG + chr7_4:23422486-23422505 Msa1146230:intron 10.0%
!! AATGCTATTAAAATTAAGTA+GGG - chr7_4:23419240-23419259 None:intergenic 15.0%
!! AAATGCTATTAAAATTAAGT+AGG - chr7_4:23419239-23419258 None:intergenic 15.0%
!! TTCAAAAATTTAAGAGTTTA+AGG - chr7_4:23418917-23418936 None:intergenic 15.0%
!! AGATAAAAAGTAATAAAATC+TGG + chr7_4:23419048-23419067 Msa1146230:intron 15.0%
!!! AATTTTGCAATAATTTTTTG+TGG + chr7_4:23419083-23419102 Msa1146230:intron 15.0%
!! AAATGCTATTAAAATTAAGT+AGG + chr7_4:23419239-23419258 Msa1146230:intron 15.0%
!! AATGCTATTAAAATTAAGTA+GGG + chr7_4:23419240-23419259 Msa1146230:intron 15.0%
!! AAGTTTGAATAATGTATTAA+CGG + chr7_4:23422461-23422480 Msa1146230:intron 15.0%
!! GATAATACTTCAAATATTAT+GGG - chr7_4:23422694-23422713 None:intergenic 15.0%
!! AGATAATACTTCAAATATTA+TGG - chr7_4:23422695-23422714 None:intergenic 15.0%
!!! ATAACTCTAAATTTTTGTAA+AGG - chr7_4:23423091-23423110 None:intergenic 15.0%
!! GCTATATAATTAAGAAAGAA+AGG + chr7_4:23418669-23418688 Msa1146230:intron 20.0%
!! TTTGATCTATGATATAATGT+TGG + chr7_4:23418720-23418739 Msa1146230:intron 20.0%
!! TAAACAAATTTGAATTGAGT+AGG + chr7_4:23419177-23419196 Msa1146230:intron 20.0%
!! AAACAAATTTGAATTGAGTA+GGG + chr7_4:23419178-23419197 Msa1146230:intron 20.0%
!!! CAAAATGGATCTAAATTTTT+GGG - chr7_4:23419314-23419333 None:intergenic 20.0%
!! AAAAATGTCCTAAAAAATGA+GGG - chr7_4:23419339-23419358 None:intergenic 20.0%
!! AAAAAATGTCCTAAAAAATG+AGG - chr7_4:23419340-23419359 None:intergenic 20.0%
!!! TATTTGAGACTTATAAGATT+AGG + chr7_4:23419380-23419399 Msa1146230:intron 20.0%
!! AAAATACATGAAGATCTATT+TGG - chr7_4:23419429-23419448 None:intergenic 20.0%
!!! TAGATCTTCATGTATTTTAT+TGG + chr7_4:23419431-23419450 Msa1146230:intron 20.0%
!! TATTAACTAATCATTCATAG+AGG - chr7_4:23421251-23421270 None:intergenic 20.0%
!!! GAATGATTAGTTAATATTTG+TGG + chr7_4:23421255-23421274 Msa1146230:intron 20.0%
!! AAGATGAAGGAAATAAATTA+TGG + chr7_4:23422141-23422160 Msa1146230:intron 20.0%
!! AGATGAAGGAAATAAATTAT+GGG + chr7_4:23422142-23422161 Msa1146230:intron 20.0%
!!! TAATTTTTTTTAACCCACTT+GGG - chr7_4:23422417-23422436 None:intergenic 20.0%
!!! TTTCGGTTAAATATGTTTTA+TGG + chr7_4:23422503-23422522 Msa1146230:intron 20.0%
!!! ACAAAAATTTAGAGTTATAG+AGG + chr7_4:23423093-23423112 Msa1146230:intron 20.0%
!!! AATCAAACTTTGTTTTAGCA+GGG - chr7_4:23418888-23418907 None:intergenic 25.0%
!!! TAATCAAACTTTGTTTTAGC+AGG - chr7_4:23418889-23418908 None:intergenic 25.0%
!!! TTAGAATTTTCTGACTTGAA+AGG + chr7_4:23418989-23419008 Msa1146230:intron 25.0%
! AGTGCAGAAAAACAAAATTA+GGG + chr7_4:23419211-23419230 Msa1146230:intron 25.0%
!! CCAAAATGGATCTAAATTTT+TGG - chr7_4:23419315-23419334 None:intergenic 25.0%
!! CCAAAAATTTAGATCCATTT+TGG + chr7_4:23419312-23419331 Msa1146230:intron 25.0%
!!! AAGATCTATTTGGTTTTGAT+AGG - chr7_4:23419419-23419438 None:intergenic 25.0%
!!! ATTTTATTGGTGACTAGATT+AGG + chr7_4:23419444-23419463 Msa1146230:intron 25.0%
!! TGATTTGTCATATGAACATA+GGG - chr7_4:23419497-23419516 None:intergenic 25.0%
!! ATGATTTGTCATATGAACAT+AGG - chr7_4:23419498-23419517 None:intergenic 25.0%
! TACAAAAAGACATAATGTTG+TGG + chr7_4:23419581-23419600 Msa1146230:CDS 25.0%
!!! AATATTTTTGTCTTTGACCT+TGG + chr7_4:23419922-23419941 Msa1146230:CDS 25.0%
! TCTTCTTACAATTAAGGATA+AGG + chr7_4:23419966-23419985 Msa1146230:CDS 25.0%
! GATCAAAAGGAAGAAAAATT+TGG + chr7_4:23420074-23420093 Msa1146230:CDS 25.0%
! AAGAAAAATTTGGACATCAT+TGG + chr7_4:23420084-23420103 Msa1146230:CDS 25.0%
! AGAAAAATTTGGACATCATT+GGG + chr7_4:23420085-23420104 Msa1146230:CDS 25.0%
! TTGATAAGGTTAAATACTTG+AGG + chr7_4:23421339-23421358 Msa1146230:intron 25.0%
!! ATTTATCAATTTGCTTCAAG+TGG + chr7_4:23421424-23421443 Msa1146230:intron 25.0%
! GGAACTTGAATCTAAAAAAT+TGG + chr7_4:23421516-23421535 Msa1146230:intron 25.0%
!! GGTGCTAAAATTAATTTTAG+TGG + chr7_4:23421715-23421734 Msa1146230:intron 25.0%
! GATGAAGGAAATAAATTATG+GGG + chr7_4:23422143-23422162 Msa1146230:intron 25.0%
!!! TGTGTAGTTTTGTTTGAATT+TGG - chr7_4:23422284-23422303 None:intergenic 25.0%
!!! GTAATTTTTTTTAACCCACT+TGG - chr7_4:23422418-23422437 None:intergenic 25.0%
! GAATGAAATTGATGTTCTTA+AGG + chr7_4:23422597-23422616 Msa1146230:CDS 25.0%
!! AATTCATCAGAGTTTTACAT+TGG - chr7_4:23422739-23422758 None:intergenic 25.0%
! TTTGATATGGTTAATACTTG+AGG + chr7_4:23422822-23422841 Msa1146230:intron 25.0%
GAGATTATTCACAATGATCA+AGG + chr7_4:23418494-23418513 Msa1146230:CDS 30.0%
!! TACAAGGTCGCTATTTTATA+GGG - chr7_4:23419271-23419290 None:intergenic 30.0%
!! TTACAAGGTCGCTATTTTAT+AGG - chr7_4:23419270-23419289 None:intergenic 30.0%
CAAGATTAGAACACTATGAA+AGG + chr7_4:23418951-23418970 Msa1146230:intron 30.0%
CAGTGCAGAAAAACAAAATT+AGG + chr7_4:23419210-23419229 Msa1146230:intron 30.0%
!! TTACAAGGTCGCTATTTTAT+AGG + chr7_4:23419270-23419289 Msa1146230:intron 30.0%
!! TACAAGGTCGCTATTTTATA+GGG + chr7_4:23419271-23419290 Msa1146230:intron 30.0%
TAAAAAATGAGGGACCAAAA+TGG - chr7_4:23419329-23419348 None:intergenic 30.0%
!!! ATTTTGGTCCCTCATTTTTT+AGG + chr7_4:23419328-23419347 Msa1146230:intron 30.0%
GGTGTTCACTCATATATATA+TGG + chr7_4:23419465-23419484 Msa1146230:intron 30.0%
! TTAATTTTACAGATGCCAAG+AGG + chr7_4:23419527-23419546 Msa1146230:intron 30.0%
! ATTATGTCTTTTTGTACCAC+AGG - chr7_4:23419577-23419596 None:intergenic 30.0%
TTGTACTTGAGAGAAATCAT+TGG - chr7_4:23419640-23419659 None:intergenic 30.0%
AATGATTTCTCTCAAGTACA+AGG + chr7_4:23419639-23419658 Msa1146230:CDS 30.0%
ATGATTTCTCTCAAGTACAA+GGG + chr7_4:23419640-23419659 Msa1146230:CDS 30.0%
TGTGTCTCTTCTTACAATTA+AGG + chr7_4:23419960-23419979 Msa1146230:CDS 30.0%
! AGAGGACTTTGATAATAGAA+TGG + chr7_4:23420032-23420051 Msa1146230:CDS 30.0%
! AATGGTGAACTATTTTGTTG+AGG + chr7_4:23420050-23420069 Msa1146230:CDS 30.0%
! ATTTTGTTGAGGAGATCAAA+AGG + chr7_4:23420061-23420080 Msa1146230:CDS 30.0%
AAAGTTTGAGGAGATCAATA+TGG + chr7_4:23420242-23420261 Msa1146230:CDS 30.0%
GAAGTTAATACATGATGTCA+TGG + chr7_4:23420548-23420567 Msa1146230:CDS 30.0%
TGTCTTCATTAATGTCTATG+AGG + chr7_4:23420650-23420669 Msa1146230:CDS 30.0%
GTCTTCATTAATGTCTATGA+GGG + chr7_4:23420651-23420670 Msa1146230:CDS 30.0%
ACAACAAAGCATACATCAAA+AGG - chr7_4:23420759-23420778 None:intergenic 30.0%
ATTCTCATCAAGCAAATTTG+CGG - chr7_4:23421072-23421091 None:intergenic 30.0%
AAATGAAAGTGATGTTCTTC+AGG + chr7_4:23421100-23421119 Msa1146230:CDS 30.0%
AAGGTTAAATACTTGAGGTT+TGG + chr7_4:23421344-23421363 Msa1146230:intron 30.0%
TATTTGAAGACTTACAATGC+AGG - chr7_4:23421376-23421395 None:intergenic 30.0%
! AAAAATTGGTTGAAAAGTGC+AGG + chr7_4:23421530-23421549 Msa1146230:intron 30.0%
! AAAATTGGTTGAAAAGTGCA+GGG + chr7_4:23421531-23421550 Msa1146230:intron 30.0%
! TTGTCTAACTTGCATGAAAT+TGG + chr7_4:23421604-23421623 Msa1146230:intron 30.0%
! TCCATGTTTGATTTCATTCT+TGG + chr7_4:23421691-23421710 Msa1146230:intron 30.0%
ACCAAGAATGAAATCAAACA+TGG - chr7_4:23421695-23421714 None:intergenic 30.0%
! ATGTTTGATTTCATTCTTGG+TGG + chr7_4:23421694-23421713 Msa1146230:intron 30.0%
AAAAGTGAATGTGAAAGAGA+AGG - chr7_4:23421934-23421953 None:intergenic 30.0%
ATGGAACATAAGAATTGCAA+CGG + chr7_4:23422214-23422233 Msa1146230:intron 30.0%
AATTTCATTCTGATGATCAC+TGG - chr7_4:23422587-23422606 None:intergenic 30.0%
CAGTTCGTTAAGATTTGATA+TGG + chr7_4:23422809-23422828 Msa1146230:intron 30.0%
TATGGTTAATACTTGAGGTT+TGG + chr7_4:23422827-23422846 Msa1146230:intron 30.0%
GCTAGTACAAAAATATTGAG+TGG + chr7_4:23423158-23423177 Msa1146230:intron 30.0%
GTACAAAAATATTGAGTGGA+AGG + chr7_4:23423162-23423181 Msa1146230:intron 30.0%
ACTAATTAAGAGATTGCCTA+GGG - chr7_4:23423309-23423328 None:intergenic 30.0%
AACTAATTAAGAGATTGCCT+AGG - chr7_4:23423310-23423329 None:intergenic 30.0%
!!! TTAGTTCAAGTTTTTTAGCG+TGG + chr7_4:23423324-23423343 Msa1146230:CDS 30.0%
AAAGATGAAGGATATGCCAT+TGG + chr7_4:23418410-23418429 Msa1146230:CDS 35.0%
TATGCCATTGGAATAGATCT+TGG + chr7_4:23418422-23418441 Msa1146230:CDS 35.0%
AGTACCAAGATCTATTCCAA+TGG - chr7_4:23418429-23418448 None:intergenic 35.0%
TGAGTGAAAGCAACAAAAGA+AGG - chr7_4:23418533-23418552 None:intergenic 35.0%
!!! TTTTGTTGCTTTCACTCAAG+AGG + chr7_4:23418535-23418554 Msa1146230:CDS 35.0%
! TACCAAAGACAGTGTTTTCT+GGG - chr7_4:23418604-23418623 None:intergenic 35.0%
! TTACCAAAGACAGTGTTTTC+TGG - chr7_4:23418605-23418624 None:intergenic 35.0%
AAGTAGGGACTAAACTTACA+AGG - chr7_4:23419255-23419274 None:intergenic 35.0%
AAGTAGGGACTAAACTTACA+AGG + chr7_4:23419255-23419274 Msa1146230:intron 35.0%
TGTTGAGGAAATCTCATCTA+TGG + chr7_4:23419681-23419700 Msa1146230:CDS 35.0%
TGAGAATCGTTGAAATAAGC+CGG - chr7_4:23419778-23419797 None:intergenic 35.0%
! ATTTTTGTCTTTGACCTTGG+TGG + chr7_4:23419925-23419944 Msa1146230:CDS 35.0%
! GTGTTTTACTGATGCTAAGA+TGG + chr7_4:23420299-23420318 Msa1146230:CDS 35.0%
!! GTTGATGATATTGTCCTTGT+TGG + chr7_4:23420333-23420352 Msa1146230:CDS 35.0%
!!! ACTATTGCAGGACTTTTTCA+AGG + chr7_4:23420386-23420405 Msa1146230:CDS 35.0%
!!! CTATTGCAGGACTTTTTCAA+GGG + chr7_4:23420387-23420406 Msa1146230:CDS 35.0%
!!! TATTGCAGGACTTTTTCAAG+GGG + chr7_4:23420388-23420407 Msa1146230:CDS 35.0%
ACATCAATCAACACCAAGTT+TGG - chr7_4:23420507-23420526 None:intergenic 35.0%
CAAAGCATACATCAAAAGGA+TGG - chr7_4:23420755-23420774 None:intergenic 35.0%
! TGCTTTGTTGTCGATCAAAA+TGG + chr7_4:23420768-23420787 Msa1146230:CDS 35.0%
! TCTTTTGACAGTTTCTGCTA+TGG + chr7_4:23420791-23420810 Msa1146230:CDS 35.0%
CTCACAATAACCAATGACAA+AGG + chr7_4:23420840-23420859 Msa1146230:CDS 35.0%
CAATAACCAATGACAAAGGA+AGG + chr7_4:23420844-23420863 Msa1146230:CDS 35.0%
AAGATTGATTGAAGAAGCTG+AGG + chr7_4:23420887-23420906 Msa1146230:CDS 35.0%
AGAATTTCCCATCATCGATA+CGG - chr7_4:23420917-23420936 None:intergenic 35.0%
TGATGGGAAATTCTTGAGAA+AGG + chr7_4:23420923-23420942 Msa1146230:CDS 35.0%
GAGAAATGTGTTGAAGAAGA+AGG + chr7_4:23420986-23421005 Msa1146230:CDS 35.0%
! AATGAGCTTGAGAGTATGTA+TGG + chr7_4:23421131-23421150 Msa1146230:intron 35.0%
! ATGAGCTTGAGAGTATGTAT+GGG + chr7_4:23421132-23421151 Msa1146230:intron 35.0%
TGAGAACATAAAAACCTAGC+AGG - chr7_4:23421174-23421193 None:intergenic 35.0%
TACTGTATTCTGCTTCGTTA+AGG + chr7_4:23421315-23421334 Msa1146230:intron 35.0%
TGCTTCGTTAAGGTTTGATA+AGG + chr7_4:23421325-23421344 Msa1146230:intron 35.0%
TGTAAAGGTCTATGACTCTA+TGG + chr7_4:23421555-23421574 Msa1146230:intron 35.0%
GTAAAGGTCTATGACTCTAT+GGG + chr7_4:23421556-23421575 Msa1146230:intron 35.0%
ACTCTATGGGAAGATATTGT+TGG + chr7_4:23421569-23421588 Msa1146230:intron 35.0%
! TCCTTTTCTACTCTCTCTAA+TGG + chr7_4:23421953-23421972 Msa1146230:intron 35.0%
TCCATTAGAGAGAGTAGAAA+AGG - chr7_4:23421957-23421976 None:intergenic 35.0%
GAAAAAGGTGAAAGGATACT+TGG - chr7_4:23422090-23422109 None:intergenic 35.0%
! AGTATCCTTTCACCTTTTTC+TGG + chr7_4:23422090-23422109 Msa1146230:intron 35.0%
AGTTTCCAGAAAAAGGTGAA+AGG - chr7_4:23422098-23422117 None:intergenic 35.0%
! TTGTGCTAGTTTCCAGAAAA+AGG - chr7_4:23422105-23422124 None:intergenic 35.0%
TAGCACAATGTTTGATGCAA+TGG + chr7_4:23422117-23422136 Msa1146230:intron 35.0%
TTGATGCAATGGAAAGATGA+AGG + chr7_4:23422128-23422147 Msa1146230:intron 35.0%
TCAAGTGAGAGATCTAAACA+AGG - chr7_4:23422185-23422204 None:intergenic 35.0%
TGTTTAGATCTCTCACTTGA+AGG + chr7_4:23422185-23422204 Msa1146230:intron 35.0%
TCTCACTTGAAGGAAAAAGA+TGG + chr7_4:23422195-23422214 Msa1146230:intron 35.0%
TGGAACATAAGAATTGCAAC+GGG + chr7_4:23422215-23422234 Msa1146230:intron 35.0%
ATAAGAATTGCAACGGGATT+GGG + chr7_4:23422221-23422240 Msa1146230:intron 35.0%
ATACCTTTCCCTCTATTATG+TGG - chr7_4:23422252-23422271 None:intergenic 35.0%
!! TTAGTATAGCAGTGTTGGTT+TGG - chr7_4:23422394-23422413 None:intergenic 35.0%
TTCGCCACTCTTAAAGAATT+CGG + chr7_4:23422913-23422932 Msa1146230:CDS 35.0%
TTAAAGAATTCGGTACGCAA+GGG + chr7_4:23422923-23422942 Msa1146230:CDS 35.0%
TAGTTCAAATTGTCCCACAT+CGG + chr7_4:23423136-23423155 Msa1146230:intron 35.0%
! ATTTTTGTACTAGCCGATGT+GGG - chr7_4:23423152-23423171 None:intergenic 35.0%
!! TATTTTTGTACTAGCCGATG+TGG - chr7_4:23423153-23423172 None:intergenic 35.0%
TTGCTTTCACTCAAGAGGAA+CGG + chr7_4:23418540-23418559 Msa1146230:CDS 40.0%
AACCCAGAAAACACTGTCTT+TGG + chr7_4:23418599-23418618 Msa1146230:CDS 40.0%
TAGGAAGTTTAGTGATCCTG+TGG + chr7_4:23419558-23419577 Msa1146230:CDS 40.0%
!! TGCTGGTCTCAATGTTTTGA+AGG + chr7_4:23419828-23419847 Msa1146230:CDS 40.0%
! CACAGTCAGTTCTCTTTTCA+AGG - chr7_4:23419891-23419910 None:intergenic 40.0%
GAAAAGAGAACTGACTGTGA+TGG + chr7_4:23419892-23419911 Msa1146230:CDS 40.0%
GAACTGACTGTGATGGTAAA+CGG + chr7_4:23419899-23419918 Msa1146230:CDS 40.0%
GGATAAGGTCTTCGAAGTTA+AGG + chr7_4:23419981-23420000 Msa1146230:CDS 40.0%
AATCTCTCGTGCAAAGTTTG+AGG + chr7_4:23420230-23420249 Msa1146230:CDS 40.0%
TCTCCATGCACTCATCAAAA+AGG - chr7_4:23420269-23420288 None:intergenic 40.0%
GATGATATTGTCCTTGTTGG+TGG + chr7_4:23420336-23420355 Msa1146230:CDS 40.0%
TGCAATAGTTGCTGCACTTT+CGG - chr7_4:23420375-23420394 None:intergenic 40.0%
CGTCAAGAATGTTCCAAACT+TGG + chr7_4:23420491-23420510 Msa1146230:CDS 40.0%
AATACATGATGTCATGGCTG+TGG + chr7_4:23420554-23420573 Msa1146230:CDS 40.0%
TTCCATTCCTGTCAAGAAGA+CGG + chr7_4:23420593-23420612 Msa1146230:CDS 40.0%
AATTGTTCCGTCTTCTTGAC+AGG - chr7_4:23420603-23420622 None:intergenic 40.0%
GCAACTGACAATCATCTTCT+TGG + chr7_4:23420687-23420706 Msa1146230:CDS 40.0%
! CTTGGTTCTTTCACTCTTTC+TGG + chr7_4:23420705-23420724 Msa1146230:CDS 40.0%
GATCAATACTGCAATTACCG+TGG + chr7_4:23421046-23421065 Msa1146230:CDS 40.0%
AGTATGTATGGGCGCATTAT+AGG + chr7_4:23421143-23421162 Msa1146230:intron 40.0%
! TCTGAAGCATTTGCTACTTC+AGG + chr7_4:23421494-23421513 Msa1146230:intron 40.0%
! CTGAAGCATTTGCTACTTCA+GGG + chr7_4:23421495-23421514 Msa1146230:intron 40.0%
! ATCATTCTCTGAGCCTCTTT+TGG + chr7_4:23421979-23421998 Msa1146230:intron 40.0%
! ATGTGTTTGGAGTTGGGAAA+AGG - chr7_4:23422026-23422045 None:intergenic 40.0%
! CTGCTAATGTGTTTGGAGTT+GGG - chr7_4:23422032-23422051 None:intergenic 40.0%
! ACTGCTAATGTGTTTGGAGT+TGG - chr7_4:23422033-23422052 None:intergenic 40.0%
ACTCCAAACACATTAGCAGT+TGG + chr7_4:23422033-23422052 Msa1146230:intron 40.0%
TTGCCAACTGCTAATGTGTT+TGG - chr7_4:23422039-23422058 None:intergenic 40.0%
CATAAGAATTGCAACGGGAT+TGG + chr7_4:23422220-23422239 Msa1146230:intron 40.0%
CTTTCCCTCTATTATGTGGT+AGG - chr7_4:23422248-23422267 None:intergenic 40.0%
CTACCACATAATAGAGGGAA+AGG + chr7_4:23422246-23422265 Msa1146230:intron 40.0%
GTCTCAAACTCAATTCTTCC+CGG - chr7_4:23422346-23422365 None:intergenic 40.0%
! TTTGAAGTGTGCTCTTCTCA+AGG - chr7_4:23422368-23422387 None:intergenic 40.0%
!! TTGGGTTAGTATAGCAGTGT+TGG - chr7_4:23422399-23422418 None:intergenic 40.0%
ACTGCTATACTAACCCAAGT+GGG + chr7_4:23422401-23422420 Msa1146230:intron 40.0%
GTGAAGATGATTATCAGCTG+CGG - chr7_4:23422545-23422564 None:intergenic 40.0%
!!! TCTGATGATCACTGGCTTTT+CGG - chr7_4:23422579-23422598 None:intergenic 40.0%
GTATGAGCACATTATAGCCA+AGG + chr7_4:23422645-23422664 Msa1146230:CDS 40.0%
TGAAAAAAGCTACCAGACCT+TGG - chr7_4:23422665-23422684 None:intergenic 40.0%
! CGTACCGAATTCTTTAAGAG+TGG - chr7_4:23422920-23422939 None:intergenic 40.0%
CTTAAAGAATTCGGTACGCA+AGG + chr7_4:23422922-23422941 Msa1146230:CDS 40.0%
TAAAGAATTCGGTACGCAAG+GGG + chr7_4:23422924-23422943 Msa1146230:CDS 40.0%
TTAATGGCATGCGAATCTCT+CGG - chr7_4:23423235-23423254 None:intergenic 40.0%
GAGATTCGCATGCCATTAAT+TGG + chr7_4:23423236-23423255 Msa1146230:intron 40.0%
ATTCGCATGCCATTAATTGG+TGG + chr7_4:23423239-23423258 Msa1146230:intron 40.0%
TTCGCATGCCATTAATTGGT+GGG + chr7_4:23423240-23423259 Msa1146230:intron 40.0%
AAAATTCGCAAGGGGATTCT+TGG - chr7_4:23423369-23423388 None:intergenic 40.0%
! AAGAATCCCCTTGCGAATTT+TGG + chr7_4:23423368-23423387 Msa1146230:CDS 40.0%
ACAGATGCCAAGAGGCTAAT+TGG + chr7_4:23419535-23419554 Msa1146230:intron 45.0%
ATGCCAAGAGGCTAATTGGT+AGG + chr7_4:23419539-23419558 Msa1146230:CDS 45.0%
! CTTCCTACCAATTAGCCTCT+TGG - chr7_4:23419545-23419564 None:intergenic 45.0%
GTGGCCATTCAAAGTCATTG+CGG + chr7_4:23419600-23419619 Msa1146230:CDS 45.0%
TGGCCATTCAAAGTCATTGC+GGG + chr7_4:23419601-23419620 Msa1146230:CDS 45.0%
ACACCCGCAATGACTTTGAA+TGG - chr7_4:23419607-23419626 None:intergenic 45.0%
TCAAGTACAAGGGACAAGAG+AGG + chr7_4:23419650-23419669 Msa1146230:CDS 45.0%
AGAGAGGAACTTCTGTGTTG+AGG + chr7_4:23419666-23419685 Msa1146230:CDS 45.0%
AAAGATGCGAGAGATTGCAG+AGG + chr7_4:23419711-23419730 Msa1146230:CDS 45.0%
AGAGATTGCAGAGGCTTATC+TGG + chr7_4:23419720-23419739 Msa1146230:CDS 45.0%
AGAAAAGCCACCATAGATGC+TGG + chr7_4:23419799-23419818 Msa1146230:CDS 45.0%
AATGACACCAGCATCTATGG+TGG - chr7_4:23419809-23419828 None:intergenic 45.0%
AGCAATGACACCAGCATCTA+TGG - chr7_4:23419812-23419831 None:intergenic 45.0%
!! ATAGATGCTGGTGTCATTGC+TGG + chr7_4:23419811-23419830 Msa1146230:CDS 45.0%
TATGCAATAGCTGCAGCAGT+TGG - chr7_4:23419865-23419884 None:intergenic 45.0%
ACTGCTGCAGCTATTGCATA+TGG + chr7_4:23419865-23419884 Msa1146230:CDS 45.0%
TTTGTCTTTGACCTTGGTGG+TGG + chr7_4:23419928-23419947 Msa1146230:CDS 45.0%
! TTGTCTTTGACCTTGGTGGT+GGG + chr7_4:23419929-23419948 Msa1146230:CDS 45.0%
! TCAACCTCCTTAGGGCTTTT+GGG - chr7_4:23420113-23420132 None:intergenic 45.0%
TGCTGTTGTCACCAATGTTG+AGG + chr7_4:23420170-23420189 Msa1146230:CDS 45.0%
!! CAAAGCATCGACCTCAACAT+TGG - chr7_4:23420184-23420203 None:intergenic 45.0%
!! TGAGGTCGATGCTTTGTTTC+AGG + chr7_4:23420188-23420207 Msa1146230:CDS 45.0%
!! GAGGTCGATGCTTTGTTTCA+GGG + chr7_4:23420189-23420208 Msa1146230:CDS 45.0%
! GGACCTTTTTGATGAGTGCA+TGG + chr7_4:23420263-23420282 Msa1146230:CDS 45.0%
! TCCTTGTTGGTGGATCTTCT+AGG + chr7_4:23420346-23420365 Msa1146230:CDS 45.0%
TCCTAGAAGATCCACCAACA+AGG - chr7_4:23420350-23420369 None:intergenic 45.0%
! GAAAGTGCAGCAACTATTGC+AGG + chr7_4:23420374-23420393 Msa1146230:CDS 45.0%
CATAAGCAACAGCCTCATCA+GGG - chr7_4:23420437-23420456 None:intergenic 45.0%
TTTCACTCAACAAAGCAGCC+TGG - chr7_4:23420470-23420489 None:intergenic 45.0%
AACTTCCAACCAAGAGACAG+TGG - chr7_4:23420534-23420553 None:intergenic 45.0%
!! ACAGGAATGGAAGTGTTCCT+TGG - chr7_4:23420585-23420604 None:intergenic 45.0%
TTCCGTCTTCTTGACAGGAA+TGG - chr7_4:23420598-23420617 None:intergenic 45.0%
TCTGCTATGGACAAATCCAC+TGG + chr7_4:23420804-23420823 Msa1146230:CDS 45.0%
CGACAACCTTCCTTTGTCAT+TGG - chr7_4:23420853-23420872 None:intergenic 45.0%
! AGGCTTACCGTATCGATGAT+GGG + chr7_4:23420907-23420926 Msa1146230:CDS 45.0%
ATCAAGCAAATTTGCGGCCA+CGG - chr7_4:23421066-23421085 None:intergenic 45.0%
CATTATAGGCAAGTCCTGCT+AGG + chr7_4:23421157-23421176 Msa1146230:intron 45.0%
! TGAAAAGTGCAGGGCTGTAA+AGG + chr7_4:23421540-23421559 Msa1146230:intron 45.0%
! ATTCTCTGAGCCTCTTTTGG+TGG + chr7_4:23421982-23422001 Msa1146230:intron 45.0%
AGTCATGAAGCCACCAAAAG+AGG - chr7_4:23421995-23422014 None:intergenic 45.0%
TGGGACCTACCACATAATAG+AGG + chr7_4:23422240-23422259 Msa1146230:intron 45.0%
GGGACCTACCACATAATAGA+GGG + chr7_4:23422241-23422260 Msa1146230:intron 45.0%
TAGTTCACCGAAACTAGCAC+CGG + chr7_4:23422324-23422343 Msa1146230:intron 45.0%
! ATTCTTCCCGGTGCTAGTTT+CGG - chr7_4:23422334-23422353 None:intergenic 45.0%
CACTGCTATACTAACCCAAG+TGG + chr7_4:23422400-23422419 Msa1146230:intron 45.0%
!!! ATGATCACTGGCTTTTCGGT+TGG - chr7_4:23422575-23422594 None:intergenic 45.0%
ACATACTCTCAAGCTCGTTC+AGG - chr7_4:23422627-23422646 None:intergenic 45.0%
AGCACATTATAGCCAAGGTC+TGG + chr7_4:23422650-23422669 Msa1146230:intron 45.0%
ACACAGTTCGCAATTCGCTT+CGG + chr7_4:23422864-23422883 Msa1146230:CDS 45.0%
AAAGAATTCGGTACGCAAGG+GGG + chr7_4:23422925-23422944 Msa1146230:CDS 45.0%
TATACAGAGTCGGTACGCTT+GGG + chr7_4:23422948-23422967 Msa1146230:intron 45.0%
AAGAGGAAGGAAATAAGCCC+TGG - chr7_4:23423267-23423286 None:intergenic 45.0%
!! TCCTTCCTCTTTTCAAGAGC+AGG + chr7_4:23423276-23423295 Msa1146230:CDS 45.0%
TCCTGCTCTTGAAAAGAGGA+AGG - chr7_4:23423280-23423299 None:intergenic 45.0%
GTGATCCTGCTCTTGAAAAG+AGG - chr7_4:23423284-23423303 None:intergenic 45.0%
GCACACGAATTCTGTGACTA+TGG + chr7_4:23423455-23423474 Msa1146230:CDS 45.0%
!!! TGTTTTTTATAAAAAAATTT+AGG + chr7_4:23418752-23418771 Msa1146230:intron 5.0%
!!! GTTTTTTATAAAAAAATTTA+GGG + chr7_4:23418753-23418772 Msa1146230:intron 5.0%
!!! ATAAGTAATTTTTTTTTATA+GGG - chr7_4:23418856-23418875 None:intergenic 5.0%
!!! TATAAGTAATTTTTTTTTAT+AGG - chr7_4:23418857-23418876 None:intergenic 5.0%
!!! AATTTTATTATTTTTATTGA+TGG - chr7_4:23423065-23423084 None:intergenic 5.0%
! CGTACTCTTGTGTTGCTGTG+TGG + chr7_4:23418450-23418469 Msa1146230:CDS 50.0%
ACTCAAGAGGAACGGCTGAT+TGG + chr7_4:23418548-23418567 Msa1146230:CDS 50.0%
! GACAGTGTTTTCTGGGTTCG+TGG - chr7_4:23418597-23418616 None:intergenic 50.0%
! AGAGGCTTATCTGGAATCGC+AGG + chr7_4:23419729-23419748 Msa1146230:CDS 50.0%
GAACGCTGTCATTACTGTGC+CGG + chr7_4:23419756-23419775 Msa1146230:CDS 50.0%
CATCAAAAGTCCCACCACCA+AGG - chr7_4:23419942-23419961 None:intergenic 50.0%
GTCTTCGAAGTTAAGGCCAC+TGG + chr7_4:23419988-23420007 Msa1146230:CDS 50.0%
TTCGAAGTTAAGGCCACTGG+TGG + chr7_4:23419991-23420010 Msa1146230:CDS 50.0%
AAGGTGAGTGTTTCCACCAG+TGG - chr7_4:23420007-23420026 None:intergenic 50.0%
ACTGGTGGAAACACTCACCT+TGG + chr7_4:23420006-23420025 Msa1146230:CDS 50.0%
CTGGTGGAAACACTCACCTT+GGG + chr7_4:23420007-23420026 Msa1146230:CDS 50.0%
TGGTGGAAACACTCACCTTG+GGG + chr7_4:23420008-23420027 Msa1146230:CDS 50.0%
TATCAAAGTCCTCTCCCCCA+AGG - chr7_4:23420026-23420045 None:intergenic 50.0%
TTGGGAACCCAAAAGCCCTA+AGG + chr7_4:23420103-23420122 Msa1146230:CDS 50.0%
! CTCAACCTCCTTAGGGCTTT+TGG - chr7_4:23420114-23420133 None:intergenic 50.0%
CGCAGTTCTCAACCTCCTTA+GGG - chr7_4:23420121-23420140 None:intergenic 50.0%
ACGCAGTTCTCAACCTCCTT+AGG - chr7_4:23420122-23420141 None:intergenic 50.0%
AGTGCATGGAGACTGTTGAG+AGG + chr7_4:23420277-23420296 Msa1146230:CDS 50.0%
!!! GCAGGACTTTTTCAAGGGGA+AGG + chr7_4:23420392-23420411 Msa1146230:CDS 50.0%
!! CAAGAGCATCAACCCTGATG+AGG + chr7_4:23420422-23420441 Msa1146230:CDS 50.0%
CCATAAGCAACAGCCTCATC+AGG - chr7_4:23420438-23420457 None:intergenic 50.0%
! CCTGATGAGGCTGTTGCTTA+TGG + chr7_4:23420435-23420454 Msa1146230:CDS 50.0%
TCATGGCTGTGGTGATTCCA+AGG + chr7_4:23420565-23420584 Msa1146230:CDS 50.0%
! GAGGCTTACCGTATCGATGA+TGG + chr7_4:23420906-23420925 Msa1146230:CDS 50.0%
GGCTGAAGTCATGAATGCTC+TGG + chr7_4:23420944-23420963 Msa1146230:CDS 50.0%
AGTTCACCGAAACTAGCACC+GGG + chr7_4:23422325-23422344 Msa1146230:intron 50.0%
! TGGCTTTTCGGTTGGATGGA+TGG - chr7_4:23422567-23422586 None:intergenic 50.0%
!!! TCACTGGCTTTTCGGTTGGA+TGG - chr7_4:23422571-23422590 None:intergenic 50.0%
GTATACAGAGTCGGTACGCT+TGG + chr7_4:23422947-23422966 Msa1146230:intron 50.0%
TGCCATTAATTGGTGGGACC+AGG + chr7_4:23423246-23423265 Msa1146230:intron 50.0%
GCCATTAATTGGTGGGACCA+GGG + chr7_4:23423247-23423266 Msa1146230:intron 50.0%
AAGAGCAGGATCACTTCCCT+AGG + chr7_4:23423290-23423309 Msa1146230:CDS 50.0%
GGTTCGCCAAAATTCGCAAG+GGG - chr7_4:23423377-23423396 None:intergenic 50.0%
CGGTTCGCCAAAATTCGCAA+GGG - chr7_4:23423378-23423397 None:intergenic 50.0%
!! CCTTGCGAATTTTGGCGAAC+CGG + chr7_4:23423376-23423395 Msa1146230:CDS 50.0%
TTCGCGGTACTTTCACGAAC+CGG - chr7_4:23423398-23423417 None:intergenic 50.0%
!! TTCGTGAAAGTACCGCGAAC+CGG + chr7_4:23423399-23423418 Msa1146230:CDS 50.0%
GGTGGAAACACTCACCTTGG+GGG + chr7_4:23420009-23420028 Msa1146230:CDS 55.0%
AAACACTCACCTTGGGGGAG+AGG + chr7_4:23420014-23420033 Msa1146230:CDS 55.0%
GGAACCCAAAAGCCCTAAGG+AGG + chr7_4:23420106-23420125 Msa1146230:CDS 55.0%
GTTGAGAACTGCGTGCGAGA+AGG + chr7_4:23420128-23420147 Msa1146230:CDS 55.0%
CTGCGTGCGAGAAGGCAAAA+AGG + chr7_4:23420136-23420155 Msa1146230:CDS 55.0%
!! TGCTTATGGTGCTGCTGTCC+AGG + chr7_4:23420449-23420468 Msa1146230:CDS 55.0%
GATGTCGCACCACTGTCTCT+TGG + chr7_4:23420522-23420541 Msa1146230:CDS 55.0%
TCGCACCACTGTCTCTTGGT+TGG + chr7_4:23420526-23420545 Msa1146230:CDS 55.0%
GAGCTCGTTCTTACTGCCAG+TGG - chr7_4:23420823-23420842 None:intergenic 55.0%
TCGCAATTCGCTTCGGTACG+TGG + chr7_4:23422871-23422890 Msa1146230:CDS 55.0%
! CGCAAGGGGGTATACAGAGT+CGG + chr7_4:23422938-23422957 Msa1146230:CDS 55.0%
GCCCTGGTCCCACCAATTAA+TGG - chr7_4:23423251-23423270 None:intergenic 55.0%
! CCGGTTCGCCAAAATTCGCA+AGG - chr7_4:23423379-23423398 None:intergenic 55.0%
TAGCCTGAGAACCGCAAACC+GGG - chr7_4:23423435-23423454 None:intergenic 55.0%
CTAGCCTGAGAACCGCAAAC+CGG - chr7_4:23423436-23423455 None:intergenic 55.0%
TTACCCCCTGCAGCTGCTCA+TGG + chr7_4:23420729-23420748 Msa1146230:CDS 60.0%
ATGGCCATGAGCAGCTGCAG+GGG - chr7_4:23420736-23420755 None:intergenic 60.0%
GATGGCCATGAGCAGCTGCA+GGG - chr7_4:23420737-23420756 None:intergenic 60.0%
CAAACCGGGTTCGCACGAAC+CGG - chr7_4:23423421-23423440 None:intergenic 60.0%
! GTTCGTGCGAACCCGGTTTG+CGG + chr7_4:23423421-23423440 Msa1146230:CDS 60.0%
! GAACCCGGTTTGCGGTTCTC+AGG + chr7_4:23423429-23423448 Msa1146230:CDS 60.0%
TGGCCATGAGCAGCTGCAGG+GGG - chr7_4:23420735-23420754 None:intergenic 65.0%
GGATGGCCATGAGCAGCTGC+AGG - chr7_4:23420738-23420757 None:intergenic 65.0%
!! GGTTCGCACGAACCGGTTCG+CGG - chr7_4:23423414-23423433 None:intergenic 65.0%
!! CGAACCGGTTCGTGCGAACC+CGG + chr7_4:23423414-23423433 Msa1146230:CDS 65.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 23418401 23423493 23418401 ID=Msa1146230;Name=Msa1146230
chr7_4 mRNA 23418401 23423493 23418401 ID=Msa1146230-mRNA-1;Parent=Msa1146230;Name=Msa1146230-mRNA-1;_AED=0.11;_eAED=0.11;_QI=0|0|0|0.6|1|1|5|0|755
chr7_4 exon 23418401 23418620 23418401 ID=Msa1146230-mRNA-1:exon:5919;Parent=Msa1146230-mRNA-1
chr7_4 exon 23419539 23421143 23419539 ID=Msa1146230-mRNA-1:exon:5920;Parent=Msa1146230-mRNA-1
chr7_4 exon 23422548 23422666 23422548 ID=Msa1146230-mRNA-1:exon:5921;Parent=Msa1146230-mRNA-1
chr7_4 exon 23422862 23422959 23422862 ID=Msa1146230-mRNA-1:exon:5922;Parent=Msa1146230-mRNA-1
chr7_4 exon 23423268 23423493 23423268 ID=Msa1146230-mRNA-1:exon:5923;Parent=Msa1146230-mRNA-1
chr7_4 CDS 23418401 23418620 23418401 ID=Msa1146230-mRNA-1:cds;Parent=Msa1146230-mRNA-1
chr7_4 CDS 23419539 23421143 23419539 ID=Msa1146230-mRNA-1:cds;Parent=Msa1146230-mRNA-1
chr7_4 CDS 23422548 23422666 23422548 ID=Msa1146230-mRNA-1:cds;Parent=Msa1146230-mRNA-1
chr7_4 CDS 23422862 23422959 23422862 ID=Msa1146230-mRNA-1:cds;Parent=Msa1146230-mRNA-1
chr7_4 CDS 23423268 23423493 23423268 ID=Msa1146230-mRNA-1:cds;Parent=Msa1146230-mRNA-1
Gene Sequence

>Msa1146230

ATGGCGAAAAAAGATGAAGGATATGCCATTGGAATAGATCTTGGTACTACGTACTCTTGTGTTGCTGTGTGGCAAGAACAACATAGTAGAGTTGAGATTATTCACAATGATCAAGGCAACAAAACTACTCCTTCTTTTGTTGCTTTCACTCAAGAGGAACGGCTGATTGGTAATTCTGCTAAGAATCAAGCTGCCACGAACCCAGAAAACACTGTCTTTGATGCCAAGAGGCTAATTGGTAGGAAGTTTAGTGATCCTGTGGTACAAAAAGACATAATGTTGTGGCCATTCAAAGTCATTGCGGGTGTGAATGACAAACCAATGATTTCTCTCAAGTACAAGGGACAAGAGAGGAACTTCTGTGTTGAGGAAATCTCATCTATGGTACTCACAAAGATGCGAGAGATTGCAGAGGCTTATCTGGAATCGCAGGTTAAGAACGCTGTCATTACTGTGCCGGCTTATTTCAACGATTCTCAAAGAAAAGCCACCATAGATGCTGGTGTCATTGCTGGTCTCAATGTTTTGAAGGTAATCAATGAACCAACTGCTGCAGCTATTGCATATGGCCTTGAAAAGAGAACTGACTGTGATGGTAAACGGAATATTTTTGTCTTTGACCTTGGTGGTGGGACTTTTGATGTGTCTCTTCTTACAATTAAGGATAAGGTCTTCGAAGTTAAGGCCACTGGTGGAAACACTCACCTTGGGGGAGAGGACTTTGATAATAGAATGGTGAACTATTTTGTTGAGGAGATCAAAAGGAAGAAAAATTTGGACATCATTGGGAACCCAAAAGCCCTAAGGAGGTTGAGAACTGCGTGCGAGAAGGCAAAAAGGACATTATCTTTTGCTGTTGTCACCAATGTTGAGGTCGATGCTTTGTTTCAGGGTGTTGATTTTTCTTCATCAATCTCTCGTGCAAAGTTTGAGGAGATCAATATGGACCTTTTTGATGAGTGCATGGAGACTGTTGAGAGGTGTTTTACTGATGCTAAGATGGACAAGAATAGTGTTGATGATATTGTCCTTGTTGGTGGATCTTCTAGGATTCCGAAAGTGCAGCAACTATTGCAGGACTTTTTCAAGGGGAAGGAATTATGCAAGAGCATCAACCCTGATGAGGCTGTTGCTTATGGTGCTGCTGTCCAGGCTGCTTTGTTGAGTGAAAGCGTCAAGAATGTTCCAAACTTGGTGTTGATTGATGTCGCACCACTGTCTCTTGGTTGGAAGTTAATACATGATGTCATGGCTGTGGTGATTCCAAGGAACACTTCCATTCCTGTCAAGAAGACGGAACAATTTTTTACTACTAAAGATTATCAAACGAGTGTCTTCATTAATGTCTATGAGGGTGAGAGAACAAGAGCAACTGACAATCATCTTCTTGGTTCTTTCACTCTTTCTGGCTTACCCCCTGCAGCTGCTCATGGCCATCCTTTTGATGTATGCTTTGTTGTCGATCAAAATGGTCTTTTGACAGTTTCTGCTATGGACAAATCCACTGGCAGTAAGAACGAGCTCACAATAACCAATGACAAAGGAAGGTTGTCGACTGACGAAATTAAAAGATTGATTGAAGAAGCTGAGGCTTACCGTATCGATGATGGGAAATTCTTGAGAAAGGCTGAAGTCATGAATGCTCTGGATCAATGTATTTACAAAATGAGAAATGTGTTGAAGAAGAAGGATATTAATCTAAAGCTCTCTTCAGAAGAAAACAAGAAGATCAATACTGCAATTACCGTGGCCGCAAATTTGCTTGATGAGAATGATCGTCAAAATGAAAGTGATGTTCTTCAGGATCACTTGAATGAGCTTGAGACTGATAATCATCTTCACCATCCATCCAACCGAAAAGCCAGTGATCATCAGAATGAAATTGATGTTCTTAAGGAACACCTGAACGAGCTTGAGAGTATGTATGAGCACATTATAGCCAAGTCACACAGTTCGCAATTCGCTTCGGTACGTGGTACGAATTCGGGTACGCGGTTCGCCACTCTTAAAGAATTCGGTACGCAAGGGGGTATACAGAGTCGGGCTTATTTCCTTCCTCTTTTCAAGAGCAGGATCACTTCCCTAGGCAATCTCTTAATTAGTTCAAGTTTTTTAGCGTGGTTCGCTGATACGTGTATTTCCAAGAATCCCCTTGCGAATTTTGGCGAACCGGTTCGTGAAAGTACCGCGAACCGGTTCGTGCGAACCCGGTTTGCGGTTCTCAGGCTAGCACACGAATTCTGTGACTATGGTATGTCTACATTGTAA
Protein sequence

>Msa1146230

MAKKDEGYAIGIDLGTTYSCVAVWQEQHSRVEIIHNDQGNKTTPSFVAFTQEERLIGNSAKNQAATNPENTVFDAKRLIGRKFSDPVVQKDIMLWPFKVIAGVNDKPMISLKYKGQERNFCVEEISSMVLTKMREIAEAYLESQVKNAVITVPAYFNDSQRKATIDAGVIAGLNVLKVINEPTAAAIAYGLEKRTDCDGKRNIFVFDLGGGTFDVSLLTIKDKVFEVKATGGNTHLGGEDFDNRMVNYFVEEIKRKKNLDIIGNPKALRRLRTACEKAKRTLSFAVVTNVEVDALFQGVDFSSSISRAKFEEINMDLFDECMETVERCFTDAKMDKNSVDDIVLVGGSSRIPKVQQLLQDFFKGKELCKSINPDEAVAYGAAVQAALLSESVKNVPNLVLIDVAPLSLGWKLIHDVMAVVIPRNTSIPVKKTEQFFTTKDYQTSVFINVYEGERTRATDNHLLGSFTLSGLPPAAAHGHPFDVCFVVDQNGLLTVSAMDKSTGSKNELTITNDKGRLSTDEIKRLIEEAEAYRIDDGKFLRKAEVMNALDQCIYKMRNVLKKKDINLKLSSEENKKINTAITVAANLLDENDRQNESDVLQDHLNELETDNHLHHPSNRKASDHQNEIDVLKEHLNELESMYEHIIAKSHSSQFASVRGTNSGTRFATLKEFGTQGGIQSRAYFLPLFKSRITSLGNLLISSSFLAWFADTCISKNPLANFGEPVRESTANRFVRTRFAVLRLAHEFCDYGMSTL*