Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0789650 | sp|Q9C6X2|SCAM4_ARATH | 72.031 | 261 | 58 | 5 | 1 | 251 | 1 | 256 | 2.78e-133 | 379 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0789650 | G7K9I4 | 93.822 | 259 | 8 | 1 | 1 | 251 | 1 | 259 | 5.83e-176 | 494 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0052610 | Msa0789650 | 0.861049 | 1.347573e-63 | -8.615850e-47 |
| Msa0057710 | Msa0789650 | 0.812633 | 3.842457e-51 | -8.615850e-47 |
| Msa0067870 | Msa0789650 | 0.831593 | 1.529041e-55 | -8.615850e-47 |
| Msa0076040 | Msa0789650 | 0.805914 | 1.060489e-49 | -8.615850e-47 |
| Msa0093850 | Msa0789650 | 0.826479 | 2.652365e-54 | -8.615850e-47 |
| Msa0098470 | Msa0789650 | 0.807294 | 5.422615e-50 | -8.615850e-47 |
| Msa0118710 | Msa0789650 | 0.807737 | 4.367847e-50 | -8.615850e-47 |
| Msa0620990 | Msa0789650 | 0.829259 | 5.689720e-55 | -8.615850e-47 |
| Msa0638480 | Msa0789650 | 0.805667 | 1.195372e-49 | -8.615850e-47 |
| Msa0666230 | Msa0789650 | 0.801812 | 7.545689e-49 | -8.615850e-47 |
| Msa0719400 | Msa0789650 | 0.964702 | 1.164579e-123 | -8.615850e-47 |
| Msa0788770 | Msa0789650 | 0.809521 | 1.816292e-50 | -8.615850e-47 |
| Msa0789650 | Msa0799000 | 0.807538 | 4.814228e-50 | -8.615850e-47 |
| Msa0789650 | Msa0804250 | 0.815644 | 8.319239e-52 | -8.615850e-47 |
| Msa0789650 | Msa0856050 | 0.806155 | 9.438455e-50 | -8.615850e-47 |
| Msa0789650 | Msa1076560 | 0.818731 | 1.682264e-52 | -8.615850e-47 |
| Msa0789650 | Msa1079230 | 0.811167 | 8.017652e-51 | -8.615850e-47 |
| Msa0789650 | Msa1124110 | 0.805367 | 1.381286e-49 | -8.615850e-47 |
| Msa0789650 | Msa1146230 | 0.801180 | 1.016827e-48 | -8.615850e-47 |
| Msa0789650 | Msa1168950 | 0.809779 | 1.598145e-50 | -8.615850e-47 |
| Msa0789650 | Msa1169040 | 0.816935 | 4.279592e-52 | -8.615850e-47 |
| Msa0789650 | Msa1182770 | 0.800346 | 1.504548e-48 | -8.615850e-47 |
| Msa0789650 | Msa1186530 | 0.809773 | 1.603075e-50 | -8.615850e-47 |
| Msa0789650 | Msa1230580 | 0.803548 | 3.307924e-49 | -8.615850e-47 |
| Msa0789650 | Msa1258710 | 0.826018 | 3.415035e-54 | -8.615850e-47 |
| Msa0789650 | Msa1305890 | 0.856902 | 2.349797e-62 | -8.615850e-47 |
| Msa0789650 | Msa1333560 | 0.806368 | 8.512032e-50 | -8.615850e-47 |
| Msa0789650 | Msa1363330 | 0.818732 | 1.681157e-52 | -8.615850e-47 |
| Msa0789650 | Msa1371520 | 0.818840 | 1.588586e-52 | -8.615850e-47 |
| Msa0789650 | Msa1373820 | 0.835614 | 1.514490e-56 | -8.615850e-47 |
| Msa0789650 | Msa1379760 | 0.822173 | 2.729413e-53 | -8.615850e-47 |
| Msa0789650 | Msa1386600 | 0.817877 | 2.625663e-52 | -8.615850e-47 |
| Msa0789650 | Msa1411950 | 0.802341 | 5.873901e-49 | -8.615850e-47 |
| Msa0789650 | Msa1459460 | 0.834739 | 2.518494e-56 | -8.615850e-47 |
| Msa0128860 | Msa0789650 | 0.821762 | 3.398290e-53 | -8.615850e-47 |
| Msa0130110 | Msa0789650 | 0.818738 | 1.675632e-52 | -8.615850e-47 |
| Msa0138360 | Msa0789650 | 0.820689 | 6.005957e-53 | -8.615850e-47 |
| Msa0167480 | Msa0789650 | 0.833404 | 5.439210e-56 | -8.615850e-47 |
| Msa0174730 | Msa0789650 | 0.817936 | 2.546061e-52 | -8.615850e-47 |
| Msa0181610 | Msa0789650 | 0.814296 | 1.656204e-51 | -8.615850e-47 |
| Msa0188690 | Msa0789650 | 0.801617 | 8.274809e-49 | -8.615850e-47 |
| Msa0188890 | Msa0789650 | 0.803681 | 3.103757e-49 | -8.615850e-47 |
| Msa0196190 | Msa0789650 | 0.821393 | 4.134408e-53 | -8.615850e-47 |
| Msa0219700 | Msa0789650 | 0.813893 | 2.032287e-51 | -8.615850e-47 |
| Msa0231100 | Msa0789650 | 0.805010 | 1.640856e-49 | -8.615850e-47 |
| Msa0231380 | Msa0789650 | 0.803922 | 2.766492e-49 | -8.615850e-47 |
| Msa0435370 | Msa0789650 | 0.815237 | 1.024693e-51 | -8.615850e-47 |
| Msa0435420 | Msa0789650 | 0.811602 | 6.449162e-51 | -8.615850e-47 |
| Msa0435570 | Msa0789650 | 0.800686 | 1.282734e-48 | -8.615850e-47 |
| Msa0241830 | Msa0789650 | 0.810598 | 1.064340e-50 | -8.615850e-47 |
| Msa0249540 | Msa0789650 | 0.807021 | 6.195631e-50 | -8.615850e-47 |
| Msa0262480 | Msa0789650 | 0.807122 | 5.896994e-50 | -8.615850e-47 |
| Msa0270660 | Msa0789650 | 0.801630 | 8.225738e-49 | -8.615850e-47 |
| Msa0279850 | Msa0789650 | 0.809795 | 1.586054e-50 | -8.615850e-47 |
| Msa0296250 | Msa0789650 | 0.830545 | 2.765518e-55 | -8.615850e-47 |
| Msa0302380 | Msa0789650 | 0.820047 | 8.432218e-53 | -8.615850e-47 |
| Msa0322900 | Msa0789650 | 0.819077 | 1.403402e-52 | -8.615850e-47 |
| Msa0341690 | Msa0789650 | 0.809489 | 1.845371e-50 | -8.615850e-47 |
| Msa0518030 | Msa0789650 | 0.803456 | 3.456562e-49 | -8.615850e-47 |
| Msa0526540 | Msa0789650 | 0.822947 | 1.802950e-53 | -8.615850e-47 |
| Msa0527150 | Msa0789650 | 0.811362 | 7.273668e-51 | -8.615850e-47 |
| Msa0527190 | Msa0789650 | 0.804252 | 2.362040e-49 | -8.615850e-47 |
| Msa0567260 | Msa0789650 | 0.800171 | 1.633502e-48 | -8.615850e-47 |
| Msa0571920 | Msa0789650 | 0.806660 | 7.385190e-50 | -8.615850e-47 |
| Msa0573380 | Msa0789650 | 0.811629 | 6.362147e-51 | -8.615850e-47 |
| Msa0576940 | Msa0789650 | 0.819405 | 1.181975e-52 | -8.615850e-47 |
| Msa0581690 | Msa0789650 | 0.800714 | 1.266145e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0789650 | MtrunA17_Chr5g0409961 | 93.822 | 259 | 8 | 1 | 1 | 251 | 1 | 259 | 1.12e-179 | 494 |
| Msa0789650 | MtrunA17_Chr2g0281411 | 60.837 | 263 | 90 | 3 | 1 | 251 | 1 | 262 | 1.28e-117 | 338 |
| Msa0789650 | MtrunA17_Chr4g0022441 | 56.643 | 286 | 83 | 6 | 1 | 251 | 1 | 280 | 2.21e-104 | 305 |
| Msa0789650 | MtrunA17_Chr4g0047981 | 54.828 | 290 | 87 | 5 | 1 | 251 | 1 | 285 | 2.91e-100 | 294 |
| Msa0789650 | MtrunA17_Chr2g0323921 | 57.282 | 103 | 43 | 1 | 149 | 251 | 73 | 174 | 4.34e-34 | 122 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0789650 | AT1G32050.1 | 72.031 | 261 | 58 | 5 | 1 | 251 | 1 | 256 | 2.82e-134 | 379 |
| Msa0789650 | AT1G61250.1 | 62.264 | 265 | 84 | 5 | 1 | 251 | 1 | 263 | 9.61e-117 | 336 |
| Msa0789650 | AT1G61250.2 | 62.357 | 263 | 83 | 5 | 1 | 249 | 1 | 261 | 5.94e-115 | 331 |
| Msa0789650 | AT1G11180.1 | 59.176 | 267 | 91 | 5 | 1 | 251 | 1 | 265 | 1.24e-108 | 315 |
| Msa0789650 | AT1G11180.3 | 58.915 | 258 | 88 | 5 | 1 | 242 | 1 | 256 | 5.45e-103 | 301 |
| Msa0789650 | AT1G11180.2 | 56.089 | 271 | 88 | 5 | 1 | 242 | 1 | 269 | 8.62e-101 | 295 |
| Msa0789650 | AT2G20840.1 | 58.397 | 262 | 92 | 5 | 1 | 251 | 1 | 256 | 5.36e-100 | 293 |
| Msa0789650 | AT1G03550.1 | 57.143 | 259 | 94 | 4 | 5 | 251 | 4 | 257 | 1.71e-98 | 289 |
| Msa0789650 | AT1G03550.4 | 57.198 | 257 | 93 | 4 | 5 | 249 | 4 | 255 | 8.36e-97 | 284 |
| Msa0789650 | AT2G20840.3 | 64.019 | 214 | 68 | 2 | 46 | 251 | 1 | 213 | 8.93e-93 | 273 |
| Msa0789650 | AT2G20840.2 | 64.019 | 214 | 68 | 2 | 46 | 251 | 1 | 213 | 8.93e-93 | 273 |
| Msa0789650 | AT1G03550.5 | 56.356 | 236 | 86 | 4 | 5 | 228 | 4 | 234 | 1.78e-85 | 255 |
| Msa0789650 | AT1G03550.3 | 59.898 | 197 | 71 | 1 | 63 | 251 | 2 | 198 | 5.09e-81 | 243 |
| Msa0789650 | AT1G03550.6 | 57.991 | 219 | 75 | 4 | 5 | 211 | 4 | 217 | 2.27e-80 | 241 |
| Msa0789650 | AT1G03550.2 | 59.783 | 184 | 66 | 1 | 76 | 251 | 15 | 198 | 9.19e-75 | 227 |
| Msa0789650 | AT1G03550.7 | 55.051 | 198 | 72 | 4 | 5 | 190 | 4 | 196 | 3.46e-71 | 217 |
Find 64 sgRNAs with CRISPR-Local
Find 407 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGATTTAGAATACCGAAAA+TGG | 0.190870 | 5_3:+38189 | None:intergenic |
| TCTAAGCTTGTGGGTAATTC+AGG | 0.236939 | 5_3:-32633 | Msa0789650:intron |
| ATATTCTATTTGATTGGATT+TGG | 0.268724 | 5_3:-32677 | Msa0789650:CDS |
| CTTATTTGGAACGCGGGATT+TGG | 0.321167 | 5_3:+38364 | None:intergenic |
| TTACAGATATTCTATTTGAT+TGG | 0.329574 | 5_3:-32683 | Msa0789650:intron |
| TTCCCCTTTCATATGTGCTT+TGG | 0.332783 | 5_3:-34883 | Msa0789650:CDS |
| TGCTCAGAGACTGCAATATT+CGG | 0.352061 | 5_3:-35498 | Msa0789650:CDS |
| TCTTCTTCTTCGAAAGGATT+GGG | 0.387663 | 5_3:+38219 | None:intergenic |
| CGTGGGAAGCTGATTTAAAA+AGG | 0.387765 | 5_3:-35962 | Msa0789650:CDS |
| TTCTTCTTCTTCGAAAGGAT+TGG | 0.394848 | 5_3:+38218 | None:intergenic |
| TCTCAGACCACGTATTGGTT+GGG | 0.395551 | 5_3:-33585 | Msa0789650:CDS |
| TTTCATATGTGCTTTGGTAC+AGG | 0.399767 | 5_3:-34877 | Msa0789650:CDS |
| GCATCCGAACCAGCTGGCTT+TGG | 0.401082 | 5_3:-36157 | Msa0789650:CDS |
| TCGGCCTTTGCTAGTTGGTT+GGG | 0.403870 | 5_3:-35479 | Msa0789650:intron |
| TTGACCAAAGCCAGCTGGTT+CGG | 0.405801 | 5_3:+36153 | None:intergenic |
| GGGATCGTGGTTGCGATTCA+TGG | 0.420493 | 5_3:+38239 | None:intergenic |
| TGCAGTCTCTGAGCATGAAC+TGG | 0.423052 | 5_3:+35506 | None:intergenic |
| GCAATATCATGGTGAATGAT+TGG | 0.423895 | 5_3:+35539 | None:intergenic |
| GGAGGCTCTTCTAAGCTTGT+GGG | 0.431780 | 5_3:-32642 | Msa0789650:CDS |
| AATATTCGGCCTTTGCTAGT+TGG | 0.435604 | 5_3:-35484 | Msa0789650:CDS |
| TGGAGGCTCTTCTAAGCTTG+TGG | 0.440195 | 5_3:-32643 | Msa0789650:CDS |
| TTCGGCCTTTGCTAGTTGGT+TGG | 0.440836 | 5_3:-35480 | Msa0789650:CDS |
| TTCTCAGACCACGTATTGGT+TGG | 0.447981 | 5_3:-33586 | Msa0789650:CDS |
| GCAGTGATTTATGCGCTGCT+TGG | 0.452548 | 5_3:-34908 | Msa0789650:intron |
| GGCCAATTCTTATCATCAAC+GGG | 0.453219 | 5_3:+35572 | None:intergenic |
| CAGTGATTTATGCGCTGCTT+GGG | 0.460483 | 5_3:-34907 | Msa0789650:CDS |
| CTTCGAAAGGATTGGGATCG+TGG | 0.477745 | 5_3:+38226 | None:intergenic |
| TTTACCTCATAGCACGATAG+AGG | 0.479958 | 5_3:+34852 | None:intergenic |
| AGCATGAACTGGAATCTCAT+TGG | 0.500620 | 5_3:+35517 | None:intergenic |
| CAATATCATGGTGAATGATT+GGG | 0.504058 | 5_3:+35540 | None:intergenic |
| TTGACTTCTTCTTCTTCGAA+AGG | 0.504243 | 5_3:+38213 | None:intergenic |
| TGCCCGTTGATGATAAGAAT+TGG | 0.505693 | 5_3:-35574 | Msa0789650:CDS |
| CTCAGACCACGTATTGGTTG+GGG | 0.512971 | 5_3:-33584 | Msa0789650:intron |
| TGCGACAGTTGACATTCCTC+TGG | 0.513711 | 5_3:-36122 | Msa0789650:CDS |
| GAATCTCATTGGCAATATCA+TGG | 0.518037 | 5_3:+35528 | None:intergenic |
| GTACCAAAGCACATATGAAA+GGG | 0.521793 | 5_3:+34880 | None:intergenic |
| AGTGATTCTCTCAACACATT+CGG | 0.525747 | 5_3:-38297 | Msa0789650:five_prime_UTR |
| AGAGAAGATTCTGTTGCTAA+AGG | 0.528658 | 5_3:-35714 | Msa0789650:intron |
| AGGTCAAGAGCTAGCAGCGT+GGG | 0.541856 | 5_3:-35979 | Msa0789650:CDS |
| GGCCCCTCTATCGTGCTATG+AGG | 0.544924 | 5_3:-34856 | Msa0789650:intron |
| GAATTCTTACAGAATGGTGT+TGG | 0.545034 | 5_3:-36205 | Msa0789650:intron |
| TGTCTTTGACCAAAGCCAGC+TGG | 0.546049 | 5_3:+36148 | None:intergenic |
| GTCTGTTGGATCAGAGGCGG+CGG | 0.547601 | 5_3:-35040 | Msa0789650:intron |
| ATAGTGCACTGAAGTTCAGT+TGG | 0.551173 | 5_3:-34643 | Msa0789650:CDS |
| TGTGTTCTCAGACCACGTAT+TGG | 0.565510 | 5_3:-33590 | Msa0789650:CDS |
| AAAATCACGTGTTCCACCGT+TGG | 0.568521 | 5_3:-36179 | Msa0789650:CDS |
| CCGTTGGCATCCGAACCAGC+TGG | 0.574974 | 5_3:-36163 | Msa0789650:CDS |
| AGGCCAATTCTTATCATCAA+CGG | 0.578386 | 5_3:+35571 | None:intergenic |
| TTACCTCATAGCACGATAGA+GGG | 0.588141 | 5_3:+34853 | None:intergenic |
| GTGATTGTCTGTTGGATCAG+AGG | 0.588719 | 5_3:-35046 | Msa0789650:CDS |
| TGTACCAAAGCACATATGAA+AGG | 0.589686 | 5_3:+34879 | None:intergenic |
| TTTCTGCTTATTTGGAACGC+GGG | 0.592387 | 5_3:+38358 | None:intergenic |
| TAGTTGCAGTGATTGTCTGT+TGG | 0.598374 | 5_3:-35054 | Msa0789650:CDS |
| CCAGCTGGTTCGGATGCCAA+CGG | 0.610993 | 5_3:+36163 | None:intergenic |
| AGAACACATCAATCGCTGCA+AGG | 0.643697 | 5_3:+33605 | None:intergenic |
| ATTGTCTGTTGGATCAGAGG+CGG | 0.648321 | 5_3:-35043 | Msa0789650:CDS |
| GCTGGTTCGGATGCCAACGG+TGG | 0.652702 | 5_3:+36166 | None:intergenic |
| CATACCCAACCAACTAGCAA+AGG | 0.654872 | 5_3:+35475 | None:intergenic |
| ATTACATTTGAAGTATCCAG+AGG | 0.656460 | 5_3:+36106 | None:intergenic |
| TACCAAAGCACATATGAAAG+GGG | 0.656856 | 5_3:+34881 | None:intergenic |
| AACTTACCCCAACCAATACG+TGG | 0.657661 | 5_3:+33578 | None:intergenic |
| TACCTCATAGCACGATAGAG+GGG | 0.671746 | 5_3:+34854 | None:intergenic |
| AAGGTCAAGAGCTAGCAGCG+TGG | 0.719415 | 5_3:-35980 | Msa0789650:CDS |
| TCAGAGTGTGATAGTGCATG+CGG | 0.730430 | 5_3:+38320 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATACTAAAAATAGAAAT+GGG | + | chr5_3:31859-31878 | None:intergenic | 10.0% |
| !! | AAAAATACTAAAAATAGAAA+TGG | + | chr5_3:31860-31879 | None:intergenic | 10.0% |
| !!! | ATTAATAAATTTAAAATTGC+AGG | - | chr5_3:36330-36349 | Msa0789650:intron | 10.0% |
| !!! | TTAATAAATTTAAAATTGCA+GGG | - | chr5_3:36331-36350 | Msa0789650:intron | 10.0% |
| !! | AATTACAGAATATATATAAA+TGG | + | chr5_3:36551-36570 | None:intergenic | 10.0% |
| !! | AAATACTAAAAATAGAAATG+GGG | + | chr5_3:31858-31877 | None:intergenic | 15.0% |
| !! | AAGTTCTCTAATAAAAATAT+CGG | + | chr5_3:32841-32860 | None:intergenic | 15.0% |
| !!! | TTTTTATTAGAGAACTTATA+AGG | - | chr5_3:32844-32863 | Msa0789650:intron | 15.0% |
| !!! | AAAATTCTTTTATATAATCG+GGG | + | chr5_3:32875-32894 | None:intergenic | 15.0% |
| !!! | CAAAATTCTTTTATATAATC+GGG | + | chr5_3:32876-32895 | None:intergenic | 15.0% |
| !!! | GCAAAATTCTTTTATATAAT+CGG | + | chr5_3:32877-32896 | None:intergenic | 15.0% |
| !! | ATTTAATGTAAAGAAATAAG+AGG | + | chr5_3:32924-32943 | None:intergenic | 15.0% |
| !! | ATATTAGATAATATACACAT+TGG | + | chr5_3:33214-33233 | None:intergenic | 15.0% |
| !! | GATAAAAACTTAAATATGAT+TGG | + | chr5_3:33641-33660 | None:intergenic | 15.0% |
| !! | ATAACTAAAATGAAACAAAA+AGG | + | chr5_3:33709-33728 | None:intergenic | 15.0% |
| !!! | ATTTAAGATTCTTTTTGATA+GGG | - | chr5_3:33911-33930 | Msa0789650:intron | 15.0% |
| !! | ATTCTTTATGATGTTTATTT+AGG | - | chr5_3:33945-33964 | Msa0789650:intron | 15.0% |
| !! | TTCTTTATGATGTTTATTTA+GGG | - | chr5_3:33946-33965 | Msa0789650:intron | 15.0% |
| !! | AGTTTACTTAATTAATAGTA+GGG | - | chr5_3:35723-35742 | Msa0789650:CDS | 15.0% |
| !!! | TAAAAGTTGAAGATTTTTAT+CGG | - | chr5_3:35780-35799 | Msa0789650:intron | 15.0% |
| !!! | TCATTTTCTCAAATTATTAT+CGG | + | chr5_3:35949-35968 | None:intergenic | 15.0% |
| !!! | TAATAAATTTAAAATTGCAG+GGG | - | chr5_3:36332-36351 | Msa0789650:intron | 15.0% |
| !!! | ATTTTTATTTACATTGTTCT+AGG | - | chr5_3:37384-37403 | Msa0789650:intron | 15.0% |
| !!! | TTTCAAGTTAGAATCAATTA+CGG | - | chr5_3:32262-32281 | Msa0789650:intron | 20.0% |
| !! | TGCTTTCTTAAAAAAAATTG+AGG | - | chr5_3:32718-32737 | Msa0789650:intron | 20.0% |
| !! | GCTTTCTTAAAAAAAATTGA+GGG | - | chr5_3:32719-32738 | Msa0789650:intron | 20.0% |
| !!! | GAATGTATTTTGACATTATT+AGG | - | chr5_3:32797-32816 | Msa0789650:intron | 20.0% |
| !! | AATAATAGCAGTATTATTCT+CGG | - | chr5_3:32998-33017 | Msa0789650:intron | 20.0% |
| !! | ATTTAAATACTGCATCTATA+AGG | + | chr5_3:33261-33280 | None:intergenic | 20.0% |
| !!! | TGTTTCATTAAGTTTTCAAA+GGG | - | chr5_3:33389-33408 | Msa0789650:intron | 20.0% |
| !!! | TTTTTATCCAAAGTACAAAT+TGG | - | chr5_3:33653-33672 | Msa0789650:intron | 20.0% |
| !!! | CATTTAAGATTCTTTTTGAT+AGG | - | chr5_3:33910-33929 | Msa0789650:intron | 20.0% |
| !!! | TTTAAGATTCTTTTTGATAG+GGG | - | chr5_3:33912-33931 | Msa0789650:intron | 20.0% |
| !! | TCTTTATGATGTTTATTTAG+GGG | - | chr5_3:33947-33966 | Msa0789650:intron | 20.0% |
| !! | TATTTAAACTGTAAACACAT+AGG | - | chr5_3:35173-35192 | Msa0789650:intron | 20.0% |
| !! | ATTTAAACTGTAAACACATA+GGG | - | chr5_3:35174-35193 | Msa0789650:intron | 20.0% |
| !! | TAACAAAAGAATTAGTAAGT+CGG | + | chr5_3:35406-35425 | None:intergenic | 20.0% |
| !! | GAGTTTACTTAATTAATAGT+AGG | - | chr5_3:35722-35741 | Msa0789650:CDS | 20.0% |
| !!! | AAAAGTTGAAGATTTTTATC+GGG | - | chr5_3:35781-35800 | Msa0789650:intron | 20.0% |
| !!! | TTATGGGTTAAATATGTTTT+TGG | + | chr5_3:35838-35857 | None:intergenic | 20.0% |
| !! | TTTAACCCATAAGAAAAAAT+TGG | - | chr5_3:35846-35865 | Msa0789650:intron | 20.0% |
| !!! | ATGATCCAATTTTTTCTTAT+GGG | + | chr5_3:35854-35873 | None:intergenic | 20.0% |
| !! | AAATGGATAATATTACAACT+TGG | + | chr5_3:36534-36553 | None:intergenic | 20.0% |
| !! | TATTCTGTAATTTAAACCTA+AGG | - | chr5_3:36559-36578 | Msa0789650:intron | 20.0% |
| !! | ATTCTGTAATTTAAACCTAA+GGG | - | chr5_3:36560-36579 | Msa0789650:intron | 20.0% |
| !! | GAAATTCAAAATGAAAAGTA+GGG | + | chr5_3:37174-37193 | None:intergenic | 20.0% |
| !! | AGAAATTCAAAATGAAAAGT+AGG | + | chr5_3:37175-37194 | None:intergenic | 20.0% |
| !!! | AATTTCTTATGTAATTTGTG+CGG | - | chr5_3:37188-37207 | Msa0789650:intron | 20.0% |
| !! | AAGAATACCAATAATATTGA+TGG | + | chr5_3:37262-37281 | None:intergenic | 20.0% |
| !! | TTACAGATATTCTATTTGAT+TGG | - | chr5_3:37280-37299 | Msa0789650:intron | 20.0% |
| !! | ATATTCTATTTGATTGGATT+TGG | - | chr5_3:37286-37305 | Msa0789650:intron | 20.0% |
| !! | AGAAATATTGTGTTGAAAAA+TGG | + | chr5_3:37774-37793 | None:intergenic | 20.0% |
| !!! | AATATTTCTATTGCAAAGAA+TGG | - | chr5_3:37785-37804 | Msa0789650:intron | 20.0% |
| !! | AAGATGATTGATTAAAAACT+AGG | - | chr5_3:37810-37829 | Msa0789650:intron | 20.0% |
| !! | AAACTAGGATTTAAATACAA+AGG | - | chr5_3:37825-37844 | Msa0789650:intron | 20.0% |
| !! | TTTGATATGCATATATGTAT+TGG | - | chr5_3:38304-38323 | Msa0789650:five_prime_UTR | 20.0% |
| !!! | GATTTGCTGTTAAAAAAAAA+TGG | + | chr5_3:38374-38393 | None:intergenic | 20.0% |
| !! | TTGATTTAGAATACCGAAAA+TGG | + | chr5_3:31777-31796 | None:intergenic | 25.0% |
| !! | TGTGATTCGTTATTTGATTT+CGG | - | chr5_3:31946-31965 | Msa0789650:intron | 25.0% |
| !! | TTCAAGTTAGAATCAATTAC+GGG | - | chr5_3:32263-32282 | Msa0789650:intron | 25.0% |
| !! | CAAAATCAATTTTATGTGTC+TGG | - | chr5_3:32293-32312 | Msa0789650:intron | 25.0% |
| !!! | TTCTGTTTTGTTTTGATTGT+TGG | - | chr5_3:32372-32391 | Msa0789650:intron | 25.0% |
| !! | TTTGATTGTTGGTAGAAAAT+AGG | - | chr5_3:32383-32402 | Msa0789650:intron | 25.0% |
| ! | TATTAGAGAAACCATTAGAA+AGG | - | chr5_3:32516-32535 | Msa0789650:intron | 25.0% |
| !!! | TTGTTGTTGTTTTGATTGTT+GGG | - | chr5_3:32652-32671 | Msa0789650:CDS | 25.0% |
| ! | AATGATTGACACAATAATTC+AGG | - | chr5_3:32691-32710 | Msa0789650:intron | 25.0% |
| ! | ATGATTGACACAATAATTCA+GGG | - | chr5_3:32692-32711 | Msa0789650:intron | 25.0% |
| ! | ATAATACTGCTATTATTGCT+AGG | + | chr5_3:32995-33014 | None:intergenic | 25.0% |
| ! | AGTTGTCTATAATTATCTCT+AGG | - | chr5_3:33065-33084 | Msa0789650:intron | 25.0% |
| ! | ATGCAGTATTTAAATTCCAA+TGG | - | chr5_3:33266-33285 | Msa0789650:intron | 25.0% |
| !! | CTGTTTCATTAAGTTTTCAA+AGG | - | chr5_3:33388-33407 | Msa0789650:intron | 25.0% |
| ! | CACAAATAGTTTCTATTAGA+TGG | + | chr5_3:33472-33491 | None:intergenic | 25.0% |
| !! | TTAGTTCTTAGGAATTAACA+AGG | + | chr5_3:33575-33594 | None:intergenic | 25.0% |
| !! | AGACATTAAAGTTAGTTCTT+AGG | + | chr5_3:33586-33605 | None:intergenic | 25.0% |
| ! | AAAACTACCAATTTGTACTT+TGG | + | chr5_3:33663-33682 | None:intergenic | 25.0% |
| !!! | GTACAAATTGGTAGTTTTTT+TGG | - | chr5_3:33665-33684 | Msa0789650:intron | 25.0% |
| !! | GTTTTTCATTCTGTTTATTG+TGG | - | chr5_3:33736-33755 | Msa0789650:intron | 25.0% |
| ! | CTTTATGATGTTTATTTAGG+GGG | - | chr5_3:33948-33967 | Msa0789650:intron | 25.0% |
| !!! | TTTTGAATTTTTTTAGCTGC+TGG | - | chr5_3:34038-34057 | Msa0789650:intron | 25.0% |
| !! | AATGAAATGAGATGTTTTCT+TGG | - | chr5_3:34691-34710 | Msa0789650:intron | 25.0% |
| ! | GGAATAAAAGATAATTAGAC+AGG | + | chr5_3:34842-34861 | None:intergenic | 25.0% |
| ! | AACATGGTAATATCTTGTAA+TGG | + | chr5_3:35374-35393 | None:intergenic | 25.0% |
| !!! | GATGATCCAATTTTTTCTTA+TGG | + | chr5_3:35855-35874 | None:intergenic | 25.0% |
| !!! | AAGACCAAAATGTTTTGAAA+GGG | + | chr5_3:36194-36213 | None:intergenic | 25.0% |
| !!! | AAAGACCAAAATGTTTTGAA+AGG | + | chr5_3:36195-36214 | None:intergenic | 25.0% |
| ! | TTTCATTTCCATGTAGTTAT+TGG | - | chr5_3:36900-36919 | Msa0789650:intron | 25.0% |
| ! | CATCTCTTCATCTAAATTAA+AGG | + | chr5_3:36979-36998 | None:intergenic | 25.0% |
| !! | ATGAAGAGATGTAAATTTTG+TGG | - | chr5_3:36988-37007 | Msa0789650:intron | 25.0% |
| !! | TGAAGAGATGTAAATTTTGT+GGG | - | chr5_3:36989-37008 | Msa0789650:intron | 25.0% |
| ! | TGTATTAGATCAAAATGATC+TGG | - | chr5_3:37061-37080 | Msa0789650:intron | 25.0% |
| !!! | ATGCATTTTTTTATCGCATT+TGG | - | chr5_3:37113-37132 | Msa0789650:intron | 25.0% |
| ! | CTTTGATCCATCAATATTAT+TGG | - | chr5_3:37252-37271 | Msa0789650:intron | 25.0% |
| ! | CAAAACATCAATAGAAAATG+AGG | + | chr5_3:37462-37481 | None:intergenic | 25.0% |
| ! | TTATAGAACTATAGACAACA+GGG | - | chr5_3:37502-37521 | Msa0789650:intron | 25.0% |
| ! | TAAAAGTAGTAGTTTCGTAA+TGG | - | chr5_3:37701-37720 | Msa0789650:intron | 25.0% |
| ! | TGATTGAAATATTTGTCTGA+TGG | - | chr5_3:37980-37999 | Msa0789650:intron | 25.0% |
| !! | AGAGAATATACATGTTTTTC+CGG | - | chr5_3:38032-38051 | Msa0789650:intron | 25.0% |
| ! | GAGAAAAAAGAGAATATACT+AGG | + | chr5_3:38129-38148 | None:intergenic | 25.0% |
| ! | AGAAGAAGTCAATCCATTTT+CGG | - | chr5_3:31761-31780 | Msa0789650:intron | 30.0% |
| ! | TTGAATTTGAGATTGCGAAT+CGG | - | chr5_3:32033-32052 | Msa0789650:intron | 30.0% |
| ! | GAATTTAGTTTCGATGTTTG+TGG | - | chr5_3:32060-32079 | Msa0789650:intron | 30.0% |
| GAAATGTAGGTTTGTGAATT+AGG | - | chr5_3:32099-32118 | Msa0789650:intron | 30.0% | |
| TAGGTTTGTGAATTAGGTTA+TGG | - | chr5_3:32105-32124 | Msa0789650:intron | 30.0% | |
| TTGAGTGTAAAAATCACGTT+TGG | - | chr5_3:32217-32236 | Msa0789650:intron | 30.0% | |
| ! | TACTGTTTGATTTCACAGTA+GGG | + | chr5_3:32335-32354 | None:intergenic | 30.0% |
| AAAATAGGCTTAGATGGTTT+GGG | - | chr5_3:32398-32417 | Msa0789650:intron | 30.0% | |
| ! | GTTTCTCTAATAGTTTTCCT+AGG | + | chr5_3:32508-32527 | None:intergenic | 30.0% |
| !! | AACCATTAGAAAGGTTTTAG+AGG | - | chr5_3:32525-32544 | Msa0789650:intron | 30.0% |
| !! | AACCTCTAAAACCTTTCTAA+TGG | + | chr5_3:32530-32549 | None:intergenic | 30.0% |
| ! | TAATGAGTTGGATCCAAATT+TGG | - | chr5_3:32549-32568 | Msa0789650:intron | 30.0% |
| !!! | GTTGTTGTTGTTTTGATTGT+TGG | - | chr5_3:32651-32670 | Msa0789650:CDS | 30.0% |
| ! | AAGAATTTTGCACAACTTTG+AGG | - | chr5_3:32886-32905 | Msa0789650:intron | 30.0% |
| ! | TAAACTCACTGACTAATCAA+AGG | - | chr5_3:32959-32978 | Msa0789650:intron | 30.0% |
| ! | AAACTCACTGACTAATCAAA+GGG | - | chr5_3:32960-32979 | Msa0789650:intron | 30.0% |
| TAATATACACATTGGTCCTA+GGG | + | chr5_3:33206-33225 | None:intergenic | 30.0% | |
| ATAATATACACATTGGTCCT+AGG | + | chr5_3:33207-33226 | None:intergenic | 30.0% | |
| ATTTAAAGATCTTCAGCCAT+TGG | + | chr5_3:33285-33304 | None:intergenic | 30.0% | |
| GTGTGATTGTTTGATATGTT+TGG | - | chr5_3:33360-33379 | Msa0789650:intron | 30.0% | |
| ATTGTGGAATTCTTACAGAA+TGG | - | chr5_3:33752-33771 | Msa0789650:intron | 30.0% | |
| ! | ATTACATTTGAAGTATCCAG+AGG | + | chr5_3:33860-33879 | None:intergenic | 30.0% |
| ! | TGTAATGTCATTTATCATGC+AGG | - | chr5_3:33874-33893 | Msa0789650:intron | 30.0% |
| ! | GTAATGTCATTTATCATGCA+GGG | - | chr5_3:33875-33894 | Msa0789650:intron | 30.0% |
| TGATTTAAAAAGGAGAGAGA+AGG | - | chr5_3:34011-34030 | Msa0789650:intron | 30.0% | |
| AAGCAAAAACTTGTATATGC+AGG | + | chr5_3:34150-34169 | None:intergenic | 30.0% | |
| ACTCTTTCAAATGCATATGT+AGG | - | chr5_3:34215-34234 | Msa0789650:intron | 30.0% | |
| TGAAAAGACCATTGAAAATC+TGG | + | chr5_3:34297-34316 | None:intergenic | 30.0% | |
| CAATATCATGGTGAATGATT+GGG | + | chr5_3:34426-34445 | None:intergenic | 30.0% | |
| !! | ATTATAGCTATTGGCTCTAA+TGG | - | chr5_3:34656-34675 | Msa0789650:intron | 30.0% |
| ! | AACATCTACTCTAGAAATCT+TGG | - | chr5_3:34777-34796 | Msa0789650:intron | 30.0% |
| CCTGCAAATGATATCAAAAT+AGG | + | chr5_3:34863-34882 | None:intergenic | 30.0% | |
| !!! | CCTATTTTGATATCATTTGC+AGG | - | chr5_3:34860-34879 | Msa0789650:CDS | 30.0% |
| AAGTGCTAGTGAATATACAA+AGG | + | chr5_3:35147-35166 | None:intergenic | 30.0% | |
| TCATTTGCCTGTAACTAAAA+GGG | + | chr5_3:35219-35238 | None:intergenic | 30.0% | |
| ATCATTTGCCTGTAACTAAA+AGG | + | chr5_3:35220-35239 | None:intergenic | 30.0% | |
| !! | TTGGTTTTTCATGTTCTACT+TGG | - | chr5_3:35339-35358 | Msa0789650:intron | 30.0% |
| ! | TTTTGATCTCTTTATCTGCT+TGG | - | chr5_3:35555-35574 | Msa0789650:CDS | 30.0% |
| !! | TGTTGATAGGAAATTTTGCA+GGG | - | chr5_3:35755-35774 | Msa0789650:intron | 30.0% |
| CTTATGCTAAAACAAGTAAG+AGG | + | chr5_3:36075-36094 | None:intergenic | 30.0% | |
| TCAGCAATGAAACAATATAG+TGG | - | chr5_3:36095-36114 | Msa0789650:intron | 30.0% | |
| CAGCAATGAAACAATATAGT+GGG | - | chr5_3:36096-36115 | Msa0789650:intron | 30.0% | |
| !!! | AGACCAAAATGTTTTGAAAG+GGG | + | chr5_3:36193-36212 | None:intergenic | 30.0% |
| AAAGAGATAACAGCACAAAA+TGG | + | chr5_3:36236-36255 | None:intergenic | 30.0% | |
| AGCATGACTTAAAAAAAAGG+TGG | + | chr5_3:36260-36279 | None:intergenic | 30.0% | |
| ACGAGCATGACTTAAAAAAA+AGG | + | chr5_3:36263-36282 | None:intergenic | 30.0% | |
| ! | GTTTGTTGAATATATTGCAC+TGG | - | chr5_3:36435-36454 | Msa0789650:intron | 30.0% |
| ACATCAGATCATAATTCCAT+AGG | + | chr5_3:36839-36858 | None:intergenic | 30.0% | |
| AGGTTCTACATTCAGTTATT+TGG | + | chr5_3:36959-36978 | None:intergenic | 30.0% | |
| ! | GATGTAAATTTTGTGGGAAT+TGG | - | chr5_3:36995-37014 | Msa0789650:intron | 30.0% |
| ! | AATTTTGTGGGAATTGGATA+TGG | - | chr5_3:37001-37020 | Msa0789650:intron | 30.0% |
| ATTCAAAATGAAAAGTAGGG+AGG | + | chr5_3:37171-37190 | None:intergenic | 30.0% | |
| GTTATAGAACTATAGACAAC+AGG | - | chr5_3:37501-37520 | Msa0789650:intron | 30.0% | |
| TGGTTCTTCATAGATACAAA+TGG | - | chr5_3:37627-37646 | Msa0789650:intron | 30.0% | |
| ! | TACAAATGGTTTCTTGCTAT+TGG | - | chr5_3:37641-37660 | Msa0789650:intron | 30.0% |
| !! | ACAAATGGTTTCTTGCTATT+GGG | - | chr5_3:37642-37661 | Msa0789650:intron | 30.0% |
| !!! | AAGGCTTTTTTTTGCTATTG+TGG | - | chr5_3:37844-37863 | Msa0789650:intron | 30.0% |
| GCAGAAGCAACAAAAATAAA+AGG | + | chr5_3:38012-38031 | None:intergenic | 30.0% | |
| ! | GAGAATATACATGTTTTTCC+GGG | - | chr5_3:38033-38052 | Msa0789650:intron | 30.0% |
| ! | AGAATATACATGTTTTTCCG+GGG | - | chr5_3:38034-38053 | Msa0789650:intron | 30.0% |
| !! | TTCTCAAGATTTTGTTGTAG+CGG | - | chr5_3:38072-38091 | Msa0789650:intron | 30.0% |
| GCATATATGTATTGGATTTC+CGG | - | chr5_3:38312-38331 | Msa0789650:five_prime_UTR | 30.0% | |
| !! | TTTTCTGCTTATTTGGAACG+CGG | + | chr5_3:31609-31628 | None:intergenic | 35.0% |
| ! | AACGCACTTTTCTGCTTATT+TGG | + | chr5_3:31616-31635 | None:intergenic | 35.0% |
| AGTGATTCTCTCAACACATT+CGG | - | chr5_3:31666-31685 | Msa0789650:intron | 35.0% | |
| ! | GTGTTTTCGCACATTTTCTT+CGG | - | chr5_3:31688-31707 | Msa0789650:intron | 35.0% |
| TCTTCTTCTTCGAAAGGATT+GGG | + | chr5_3:31747-31766 | None:intergenic | 35.0% | |
| TTCTTCTTCTTCGAAAGGAT+TGG | + | chr5_3:31748-31767 | None:intergenic | 35.0% | |
| TTGACTTCTTCTTCTTCGAA+AGG | + | chr5_3:31753-31772 | None:intergenic | 35.0% | |
| TCCAACATTCTCTAGATTTG+CGG | - | chr5_3:31895-31914 | Msa0789650:intron | 35.0% | |
| ! | TTTAGTTTCGATGTTTGTGG+AGG | - | chr5_3:32063-32082 | Msa0789650:intron | 35.0% |
| ! | CTACTGTTTGATTTCACAGT+AGG | + | chr5_3:32336-32355 | None:intergenic | 35.0% |
| TGGTAGAAAATAGGCTTAGA+TGG | - | chr5_3:32392-32411 | Msa0789650:intron | 35.0% | |
| GAAAATAGGCTTAGATGGTT+TGG | - | chr5_3:32397-32416 | Msa0789650:intron | 35.0% | |
| AGTCAAGTTAAAAGTGGTAG+AGG | - | chr5_3:32478-32497 | Msa0789650:intron | 35.0% | |
| !!! | GGTTTTAGAGGTTAATGAGT+TGG | - | chr5_3:32537-32556 | Msa0789650:intron | 35.0% |
| GTCAGTGAGTTTATAGTACA+GGG | + | chr5_3:32952-32971 | None:intergenic | 35.0% | |
| AGTCAGTGAGTTTATAGTAC+AGG | + | chr5_3:32953-32972 | None:intergenic | 35.0% | |
| TACTGCTATTATTGCTAGGT+AGG | + | chr5_3:32991-33010 | None:intergenic | 35.0% | |
| !! | AAACACAGTGTAGAGGTATT+GGG | - | chr5_3:33090-33109 | Msa0789650:intron | 35.0% |
| TATAAGTTTACACCCAGAAG+AGG | + | chr5_3:33164-33183 | None:intergenic | 35.0% | |
| AATATACACATTGGTCCTAG+GGG | + | chr5_3:33205-33224 | None:intergenic | 35.0% | |
| !!! | GGTAGTTTTTTTGGAAACCT+TGG | - | chr5_3:33674-33693 | Msa0789650:intron | 35.0% |
| GAATTCTTACAGAATGGTGT+TGG | - | chr5_3:33758-33777 | Msa0789650:intron | 35.0% | |
| !!! | TAGCTCTTGACCTTTTTTCT+TGG | + | chr5_3:33977-33996 | None:intergenic | 35.0% |
| TTAAAAAGGAGAGAGAAGGT+TGG | - | chr5_3:34015-34034 | Msa0789650:intron | 35.0% | |
| GTCAAAATCCTCAAAAGCAA+AGG | + | chr5_3:34197-34216 | None:intergenic | 35.0% | |
| AGAGAAGATTCTGTTGCTAA+AGG | - | chr5_3:34249-34268 | Msa0789650:intron | 35.0% | |
| TTCGAAATATGCTTATCAGC+TGG | - | chr5_3:34364-34383 | Msa0789650:intron | 35.0% | |
| AGGCCAATTCTTATCATCAA+CGG | + | chr5_3:34395-34414 | None:intergenic | 35.0% | |
| TGAATGATTGGGAAAAATGG+AGG | + | chr5_3:34415-34434 | None:intergenic | 35.0% | |
| TGGTGAATGATTGGGAAAAA+TGG | + | chr5_3:34418-34437 | None:intergenic | 35.0% | |
| GCAATATCATGGTGAATGAT+TGG | + | chr5_3:34427-34446 | None:intergenic | 35.0% | |
| GAATCTCATTGGCAATATCA+TGG | + | chr5_3:34438-34457 | None:intergenic | 35.0% | |
| ! | ACTTCTTACCAGCATTTTCT+TGG | - | chr5_3:34574-34593 | Msa0789650:intron | 35.0% |
| ! | TTTGCTTTGGTTTAACGACA+TGG | + | chr5_3:34612-34631 | None:intergenic | 35.0% |
| ATGTCGTTAAACCAAAGCAA+AGG | - | chr5_3:34611-34630 | Msa0789650:intron | 35.0% | |
| TGTCGTTAAACCAAAGCAAA+GGG | - | chr5_3:34612-34631 | Msa0789650:intron | 35.0% | |
| TTACCCGTGATTATAGCTAT+TGG | - | chr5_3:34647-34666 | Msa0789650:CDS | 35.0% | |
| AGAGCCAATAGCTATAATCA+CGG | + | chr5_3:34654-34673 | None:intergenic | 35.0% | |
| GAGTAGATGTTTGTGTTTGA+GGG | + | chr5_3:34768-34787 | None:intergenic | 35.0% | |
| AGAGTAGATGTTTGTGTTTG+AGG | + | chr5_3:34769-34788 | None:intergenic | 35.0% | |
| ACAACACGAAACTAGAGAAT+TGG | + | chr5_3:34979-34998 | None:intergenic | 35.0% | |
| ! | AATTCTCTAGTTTCGTGTTG+TGG | - | chr5_3:34978-34997 | Msa0789650:intron | 35.0% |
| ACATTGTAAACTTCACAGTG+AGG | + | chr5_3:35011-35030 | None:intergenic | 35.0% | |
| TACCAAAGCACATATGAAAG+GGG | + | chr5_3:35085-35104 | None:intergenic | 35.0% | |
| GTACCAAAGCACATATGAAA+GGG | + | chr5_3:35086-35105 | None:intergenic | 35.0% | |
| TGTACCAAAGCACATATGAA+AGG | + | chr5_3:35087-35106 | None:intergenic | 35.0% | |
| TTTCATATGTGCTTTGGTAC+AGG | - | chr5_3:35086-35105 | Msa0789650:intron | 35.0% | |
| TCATAATGCACAATCAGGTT+AGG | + | chr5_3:35262-35281 | None:intergenic | 35.0% | |
| AACCTGATTGTGCATTATGA+TGG | - | chr5_3:35262-35281 | Msa0789650:intron | 35.0% | |
| AACCATCATAATGCACAATC+AGG | + | chr5_3:35267-35286 | None:intergenic | 35.0% | |
| ! | TATGATTGTTTCTCTTCTGC+AGG | - | chr5_3:35293-35312 | Msa0789650:intron | 35.0% |
| TTTCCATGAAAAACAACTGG+AGG | + | chr5_3:35485-35504 | None:intergenic | 35.0% | |
| GACTTTCCATGAAAAACAAC+TGG | + | chr5_3:35488-35507 | None:intergenic | 35.0% | |
| ! | GTGGGACATTTTAAATGACA+TGG | + | chr5_3:35679-35698 | None:intergenic | 35.0% |
| GTAAACTCGTGTTTGACTAA+TGG | + | chr5_3:35710-35729 | None:intergenic | 35.0% | |
| AGGGAACTAAAACTGTTGAT+AGG | - | chr5_3:35742-35761 | Msa0789650:intron | 35.0% | |
| !! | CTGTTGATAGGAAATTTTGC+AGG | - | chr5_3:35754-35773 | Msa0789650:intron | 35.0% |
| AATTCAATGTAACCATGCGT+CGG | - | chr5_3:35972-35991 | Msa0789650:CDS | 35.0% | |
| ACATGATATGTATCTGACAC+CGG | - | chr5_3:36001-36020 | Msa0789650:intron | 35.0% | |
| ! | TTTGTCATTCGTTTGAGTTC+AGG | - | chr5_3:36143-36162 | Msa0789650:CDS | 35.0% |
| ! | GTTCCCCTTTCAAAACATTT+TGG | - | chr5_3:36187-36206 | Msa0789650:CDS | 35.0% |
| GGTCTTTCTCATATTGTAGT+TGG | - | chr5_3:36208-36227 | Msa0789650:intron | 35.0% | |
| AGATCATAATTCCATAGGAG+AGG | + | chr5_3:36834-36853 | None:intergenic | 35.0% | |
| GTTAAGAGCCAATAACTACA+TGG | + | chr5_3:36911-36930 | None:intergenic | 35.0% | |
| GGATATGGAACTAGATTTAG+TGG | - | chr5_3:37016-37035 | Msa0789650:intron | 35.0% | |
| AAAAATGCATCCATGTTCAC+TGG | + | chr5_3:37103-37122 | None:intergenic | 35.0% | |
| AGCATGTAAGCACAGTTAAA+AGG | + | chr5_3:37234-37253 | None:intergenic | 35.0% | |
| AGGGCAAGAGTAAATTAGAA+CGG | - | chr5_3:37539-37558 | Msa0789650:intron | 35.0% | |
| AACACACTTCAGTCTTCAAA+AGG | + | chr5_3:37586-37605 | None:intergenic | 35.0% | |
| TTGTATCTATGAAGAACCAC+TGG | + | chr5_3:37626-37645 | None:intergenic | 35.0% | |
| !! | CAAATGGTTTCTTGCTATTG+GGG | - | chr5_3:37643-37662 | Msa0789650:intron | 35.0% |
| !! | AAATGGTTTCTTGCTATTGG+GGG | - | chr5_3:37644-37663 | Msa0789650:intron | 35.0% |
| !!! | TTTTTTGCTATTGTGGACTC+TGG | - | chr5_3:37851-37870 | Msa0789650:intron | 35.0% |
| !!! | TTTTTGCTATTGTGGACTCT+GGG | - | chr5_3:37852-37871 | Msa0789650:intron | 35.0% |
| AGTGAAAAACACAGAAGTCA+TGG | + | chr5_3:37924-37943 | None:intergenic | 35.0% | |
| ! | GAATATACATGTTTTTCCGG+GGG | - | chr5_3:38035-38054 | Msa0789650:intron | 35.0% |
| TATTGCAAAGAATGGAGAAG+AGG | + | chr5_3:38155-38174 | None:intergenic | 35.0% | |
| CACGAAGATATTGCAAAGAA+TGG | + | chr5_3:38163-38182 | None:intergenic | 35.0% | |
| TTCTTTGCAATATCTTCGTG+TGG | - | chr5_3:38163-38182 | Msa0789650:intron | 35.0% | |
| ! | TTTCTGCTTATTTGGAACGC+GGG | + | chr5_3:31608-31627 | None:intergenic | 40.0% |
| ACCGCAAATCTAGAGAATGT+TGG | + | chr5_3:31899-31918 | None:intergenic | 40.0% | |
| ACTTGGATCTGGAGAAATGT+AGG | - | chr5_3:32086-32105 | Msa0789650:intron | 40.0% | |
| ! | TGTTTGATTTCACAGTAGGG+AGG | + | chr5_3:32332-32351 | None:intergenic | 40.0% |
| CAAACAGTAGCAAAGTAGAG+TGG | - | chr5_3:32346-32365 | Msa0789650:intron | 40.0% | |
| ! | TTGATCGACTCTTCTTACGA+CGG | + | chr5_3:32449-32468 | None:intergenic | 40.0% |
| CGTAAGAAGAGTCGATCAAA+CGG | - | chr5_3:32450-32469 | Msa0789650:intron | 40.0% | |
| GAGGAGAGTCAAGTTAAAAG+TGG | - | chr5_3:32472-32491 | Msa0789650:intron | 40.0% | |
| GCTCTGTCATGAACCAAATT+TGG | + | chr5_3:32565-32584 | None:intergenic | 40.0% | |
| ! | TGGTTCATGACAGAGCATTA+TGG | - | chr5_3:32569-32588 | Msa0789650:intron | 40.0% |
| TGACATTATTAGGCACAGAG+AGG | - | chr5_3:32807-32826 | Msa0789650:intron | 40.0% | |
| TATTAGGCACAGAGAGGTTT+AGG | - | chr5_3:32813-32832 | Msa0789650:intron | 40.0% | |
| ! | AGCAGATGAAGTTTTTCTCG+TGG | - | chr5_3:33039-33058 | Msa0789650:intron | 40.0% |
| ! | CAAACACAGTGTAGAGGTAT+TGG | - | chr5_3:33089-33108 | Msa0789650:intron | 40.0% |
| AAATTGTAGACGCCTCTTCT+GGG | - | chr5_3:33149-33168 | Msa0789650:intron | 40.0% | |
| !! | CAAAAAGGCATCAAATGCCA+AGG | + | chr5_3:33694-33713 | None:intergenic | 40.0% |
| ! | CGTGGGAAGCTGATTTAAAA+AGG | - | chr5_3:34001-34020 | Msa0789650:intron | 40.0% |
| GCAGGCATTTAAGAGAATAC+AGG | + | chr5_3:34132-34151 | None:intergenic | 40.0% | |
| TTCTGCCACTATTAGTCAAC+TGG | - | chr5_3:34168-34187 | Msa0789650:intron | 40.0% | |
| GGATACCAGTTGACTAATAG+TGG | + | chr5_3:34176-34195 | None:intergenic | 40.0% | |
| !! | ACTGGTATCCTTTGCTTTTG+AGG | - | chr5_3:34186-34205 | Msa0789650:intron | 40.0% |
| CATTGAAAATCTGGCATGGA+GGG | + | chr5_3:34288-34307 | None:intergenic | 40.0% | |
| AGACCATTGAAAATCTGGCA+TGG | + | chr5_3:34292-34311 | None:intergenic | 40.0% | |
| !! | TGCCCGTTGATGATAAGAAT+TGG | - | chr5_3:34389-34408 | Msa0789650:intron | 40.0% |
| GGCCAATTCTTATCATCAAC+GGG | + | chr5_3:34394-34413 | None:intergenic | 40.0% | |
| AGCATGAACTGGAATCTCAT+TGG | + | chr5_3:34449-34468 | None:intergenic | 40.0% | |
| TGCTCAGAGACTGCAATATT+CGG | - | chr5_3:34465-34484 | Msa0789650:intron | 40.0% | |
| AATATTCGGCCTTTGCTAGT+TGG | - | chr5_3:34479-34498 | Msa0789650:CDS | 40.0% | |
| GCTACTTACCAAGAAAATGC+TGG | + | chr5_3:34585-34604 | None:intergenic | 40.0% | |
| AAAATGCATGCCCTTTGCTT+TGG | + | chr5_3:34625-34644 | None:intergenic | 40.0% | |
| GAGCCAATAGCTATAATCAC+GGG | + | chr5_3:34653-34672 | None:intergenic | 40.0% | |
| !! | ATAGCTATTGGCTCTAATGG+TGG | - | chr5_3:34659-34678 | Msa0789650:intron | 40.0% |
| !! | TAGCTATTGGCTCTAATGGT+GGG | - | chr5_3:34660-34679 | Msa0789650:intron | 40.0% |
| TGATATAAATGCCTGCCCAA+TGG | + | chr5_3:34728-34747 | None:intergenic | 40.0% | |
| TAGTTGCAGTGATTGTCTGT+TGG | - | chr5_3:34909-34928 | Msa0789650:intron | 40.0% | |
| CTGTGAAGTTTACAATGTGC+AGG | - | chr5_3:35013-35032 | Msa0789650:intron | 40.0% | |
| TTCCCCTTTCATATGTGCTT+TGG | - | chr5_3:35080-35099 | Msa0789650:CDS | 40.0% | |
| TTACCTCATAGCACGATAGA+GGG | + | chr5_3:35113-35132 | None:intergenic | 40.0% | |
| TTTACCTCATAGCACGATAG+AGG | + | chr5_3:35114-35133 | None:intergenic | 40.0% | |
| ACTGTAAACACATAGGGCTT+AGG | - | chr5_3:35180-35199 | Msa0789650:intron | 40.0% | |
| ATAGGGCTTAGGACTACTTA+GGG | - | chr5_3:35191-35210 | Msa0789650:intron | 40.0% | |
| !! | TAGGGATCCCTTTTAGTTAC+AGG | - | chr5_3:35209-35228 | Msa0789650:intron | 40.0% |
| AATGCACAATCAGGTTAGGA+GGG | + | chr5_3:35258-35277 | None:intergenic | 40.0% | |
| TAATGCACAATCAGGTTAGG+AGG | + | chr5_3:35259-35278 | None:intergenic | 40.0% | |
| ATAGTGCACTGAAGTTCAGT+TGG | - | chr5_3:35320-35339 | Msa0789650:intron | 40.0% | |
| AAGTCGGTCACTAAGTAACA+TGG | + | chr5_3:35390-35409 | None:intergenic | 40.0% | |
| !! | AGTTCTACAAGCTGTTTTGC+AGG | - | chr5_3:35517-35536 | Msa0789650:CDS | 40.0% |
| !! | GTTCTACAAGCTGTTTTGCA+GGG | - | chr5_3:35518-35537 | Msa0789650:CDS | 40.0% |
| ! | GTCATTTAAAATGTCCCACG+TGG | - | chr5_3:35680-35699 | Msa0789650:intron | 40.0% |
| TATGAAGCACAGATACTCCT+AGG | + | chr5_3:36038-36057 | None:intergenic | 40.0% | |
| !! | TAGGAGTATCTGTGCTTCAT+AGG | - | chr5_3:36037-36056 | Msa0789650:intron | 40.0% |
| ACACAATCAAACAGACCCTT+AGG | + | chr5_3:36578-36597 | None:intergenic | 40.0% | |
| GGGTCTGTTTGATTGTGTTT+AGG | - | chr5_3:36580-36599 | Msa0789650:intron | 40.0% | |
| ACTAATTGCCTTCGAGACTT+GGG | + | chr5_3:36786-36805 | None:intergenic | 40.0% | |
| AGTGGTGTCTAGCTACTATA+AGG | - | chr5_3:37034-37053 | Msa0789650:intron | 40.0% | |
| !! | TGGATTTGGTCTGTTTTGCT+TGG | - | chr5_3:37300-37319 | Msa0789650:intron | 40.0% |
| ! | ATTTGGTCTGTTTTGCTTGG+AGG | - | chr5_3:37303-37322 | Msa0789650:intron | 40.0% |
| TCTAAGCTTGTGGGTAATTC+AGG | - | chr5_3:37330-37349 | Msa0789650:intron | 40.0% | |
| AACAGTGAATGATTCACCAG+TGG | - | chr5_3:37607-37626 | Msa0789650:intron | 40.0% | |
| !! | AATGGTTTCTTGCTATTGGG+GGG | - | chr5_3:37645-37664 | Msa0789650:intron | 40.0% |
| AGCTCACTTGGTTGAGTTTA+AGG | - | chr5_3:37674-37693 | Msa0789650:intron | 40.0% | |
| GGGAAACTCAAGACTATGTT+TGG | - | chr5_3:37872-37891 | Msa0789650:intron | 40.0% | |
| AAGAAACTTGCAAGTGTAGC+TGG | + | chr5_3:37950-37969 | None:intergenic | 40.0% | |
| CTGTCAAGTACAGACAACTA+TGG | + | chr5_3:38221-38240 | None:intergenic | 40.0% | |
| TATGTATTGGATTTCCGGTG+TGG | - | chr5_3:38317-38336 | Msa0789650:five_prime_UTR | 40.0% | |
| CATCTACACTATATCCACAC+CGG | + | chr5_3:38334-38353 | None:intergenic | 40.0% | |
| ! | CTTATTTGGAACGCGGGATT+TGG | + | chr5_3:31602-31621 | None:intergenic | 45.0% |
| ! | TCAGAGTGTGATAGTGCATG+CGG | + | chr5_3:31646-31665 | None:intergenic | 45.0% |
| ! | TTTGAGATTGCGAATCGGTG+TGG | - | chr5_3:32038-32057 | Msa0789650:intron | 45.0% |
| TTCGATGTTTGTGGAGGACT+TGG | - | chr5_3:32069-32088 | Msa0789650:intron | 45.0% | |
| TTTGTGTTCACGTAACGCAG+TGG | - | chr5_3:32133-32152 | Msa0789650:intron | 45.0% | |
| AAGAAGAGTCGATCAAACGG+AGG | - | chr5_3:32453-32472 | Msa0789650:intron | 45.0% | |
| AAAGTGGTAGAGGAAGACCT+AGG | - | chr5_3:32488-32507 | Msa0789650:intron | 45.0% | |
| ! | AAGCCTTATCCCACTAAGTG+GGG | + | chr5_3:32618-32637 | None:intergenic | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | + | chr5_3:32619-32638 | None:intergenic | 45.0% |
| CTAGGACAAACACAGTGTAG+AGG | - | chr5_3:33083-33102 | Msa0789650:intron | 45.0% | |
| !! | AGAGGTATTGGGTATGCTGA+AGG | - | chr5_3:33101-33120 | Msa0789650:intron | 45.0% |
| GAAATTGTAGACGCCTCTTC+TGG | - | chr5_3:33148-33167 | Msa0789650:intron | 45.0% | |
| ATACCTTCTGTGAAACCCCT+AGG | - | chr5_3:33187-33206 | Msa0789650:intron | 45.0% | |
| AAAATCACGTGTTCCACCGT+TGG | - | chr5_3:33784-33803 | Msa0789650:intron | 45.0% | |
| TAGGGGGACTCCAAGAAAAA+AGG | - | chr5_3:33964-33983 | Msa0789650:intron | 45.0% | |
| CCATTGAAAATCTGGCATGG+AGG | + | chr5_3:34289-34308 | None:intergenic | 45.0% | |
| ! | CCTCCATGCCAGATTTTCAA+TGG | - | chr5_3:34286-34305 | Msa0789650:intron | 45.0% |
| CATACCCAACCAACTAGCAA+AGG | + | chr5_3:34491-34510 | None:intergenic | 45.0% | |
| CTTTGCTAGTTGGTTGGGTA+TGG | - | chr5_3:34489-34508 | Msa0789650:CDS | 45.0% | |
| TTGGCAAGACTCGTTCCATT+GGG | - | chr5_3:34710-34729 | Msa0789650:intron | 45.0% | |
| GTGATTGTCTGTTGGATCAG+AGG | - | chr5_3:34917-34936 | Msa0789650:intron | 45.0% | |
| ATTGTCTGTTGGATCAGAGG+CGG | - | chr5_3:34920-34939 | Msa0789650:intron | 45.0% | |
| ! | TCTAGTTTCGTGTTGTGGCT+TGG | - | chr5_3:34983-35002 | Msa0789650:intron | 45.0% |
| CTAGTTTCGTGTTGTGGCTT+GGG | - | chr5_3:34984-35003 | Msa0789650:intron | 45.0% | |
| CAGTGATTTATGCGCTGCTT+GGG | - | chr5_3:35056-35075 | Msa0789650:CDS | 45.0% | |
| TACCTCATAGCACGATAGAG+GGG | + | chr5_3:35112-35131 | None:intergenic | 45.0% | |
| CATAGGGCTTAGGACTACTT+AGG | - | chr5_3:35190-35209 | Msa0789650:intron | 45.0% | |
| !!! | GCACCTCCAGTTGTTTTTCA+TGG | - | chr5_3:35479-35498 | Msa0789650:intron | 45.0% |
| TGACTAATGGAAGTCCACGT+GGG | + | chr5_3:35697-35716 | None:intergenic | 45.0% | |
| TTGACTAATGGAAGTCCACG+TGG | + | chr5_3:35698-35717 | None:intergenic | 45.0% | |
| GTTTATGTCTGTGTCGTGTC+TGG | + | chr5_3:35917-35936 | None:intergenic | 45.0% | |
| GCACAGATACTCCTAGGATT+AGG | + | chr5_3:36032-36051 | None:intergenic | 45.0% | |
| ! | GTCATTCGTTTGAGTTCAGG+TGG | - | chr5_3:36146-36165 | Msa0789650:CDS | 45.0% |
| ! | ATTCGTTTGAGTTCAGGTGG+TGG | - | chr5_3:36149-36168 | Msa0789650:CDS | 45.0% |
| ! | TTCGTTTGAGTTCAGGTGGT+GGG | - | chr5_3:36150-36169 | Msa0789650:CDS | 45.0% |
| AGAACACATCAATCGCTGCA+AGG | + | chr5_3:36361-36380 | None:intergenic | 45.0% | |
| TGTGTTCTCAGACCACGTAT+TGG | - | chr5_3:36373-36392 | Msa0789650:intron | 45.0% | |
| ! | TTCTCAGACCACGTATTGGT+TGG | - | chr5_3:36377-36396 | Msa0789650:intron | 45.0% |
| !! | TCTCAGACCACGTATTGGTT+GGG | - | chr5_3:36378-36397 | Msa0789650:intron | 45.0% |
| AACTTACCCCAACCAATACG+TGG | + | chr5_3:36388-36407 | None:intergenic | 45.0% | |
| CTAATTGCCTTCGAGACTTG+GGG | + | chr5_3:36785-36804 | None:intergenic | 45.0% | |
| CACTAATTGCCTTCGAGACT+TGG | + | chr5_3:36787-36806 | None:intergenic | 45.0% | |
| TTCCATAGGAGAGGAGAAAG+AGG | + | chr5_3:36825-36844 | None:intergenic | 45.0% | |
| ! | TGTTCACTGGTTGCACTTGA+GGG | + | chr5_3:37090-37109 | None:intergenic | 45.0% |
| ! | ATGTTCACTGGTTGCACTTG+AGG | + | chr5_3:37091-37110 | None:intergenic | 45.0% |
| TCAAGTGCAACCAGTGAACA+TGG | - | chr5_3:37090-37109 | Msa0789650:intron | 45.0% | |
| CTTGTGGGTAATTCAGGTGA+GGG | - | chr5_3:37336-37355 | Msa0789650:intron | 45.0% | |
| ! | ACAGGGAGTTGCTTTAGATG+AGG | - | chr5_3:37519-37538 | Msa0789650:intron | 45.0% |
| ! | CAGGGAGTTGCTTTAGATGA+GGG | - | chr5_3:37520-37539 | Msa0789650:intron | 45.0% |
| ! | GAACGGCCTTGTAAGAGTTT+AGG | - | chr5_3:37556-37575 | Msa0789650:intron | 45.0% |
| ! | GGAGTGCCTAAACTCTTACA+AGG | + | chr5_3:37565-37584 | None:intergenic | 45.0% |
| !! | TTTCTTGCTATTGGGGGGAT+GGG | - | chr5_3:37650-37669 | Msa0789650:intron | 45.0% |
| GAGAATATACTAGGCCACAC+TGG | + | chr5_3:38120-38139 | None:intergenic | 45.0% | |
| !!! | TATCTATTTATTAATTATTT+TGG | - | chr5_3:34526-34545 | Msa0789650:intron | 5.0% |
| !! | TAAATGTATTAAAAAAAATT+GGG | + | chr5_3:35624-35643 | None:intergenic | 5.0% |
| !! | TTAAATGTATTAAAAAAAAT+TGG | + | chr5_3:35625-35644 | None:intergenic | 5.0% |
| !!! | AATGAATTTTTAAATTTTAT+AGG | - | chr5_3:35810-35829 | Msa0789650:intron | 5.0% |
| !!! | ATGAATTTTTAAATTTTATA+GGG | - | chr5_3:35811-35830 | Msa0789650:intron | 5.0% |
| CTTCGAAAGGATTGGGATCG+TGG | + | chr5_3:31740-31759 | None:intergenic | 50.0% | |
| GTTTGTGGAGGACTTGGATC+TGG | - | chr5_3:32075-32094 | Msa0789650:intron | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | + | chr5_3:32614-32633 | None:intergenic | 50.0% | |
| ! | CCAAGCCTTATCCCACTAAG+TGG | + | chr5_3:32620-32639 | None:intergenic | 50.0% |
| CCACTTAGTGGGATAAGGCT+TGG | - | chr5_3:32617-32636 | Msa0789650:intron | 50.0% | |
| TTGACCAAAGCCAGCTGGTT+CGG | + | chr5_3:33813-33832 | None:intergenic | 50.0% | |
| TGTCTTTGACCAAAGCCAGC+TGG | + | chr5_3:33818-33837 | None:intergenic | 50.0% | |
| TGCGACAGTTGACATTCCTC+TGG | - | chr5_3:33841-33860 | Msa0789650:intron | 50.0% | |
| TGCAGTCTCTGAGCATGAAC+TGG | + | chr5_3:34460-34479 | None:intergenic | 50.0% | |
| TTCGGCCTTTGCTAGTTGGT+TGG | - | chr5_3:34483-34502 | Msa0789650:CDS | 50.0% | |
| TCGGCCTTTGCTAGTTGGTT+GGG | - | chr5_3:34484-34503 | Msa0789650:CDS | 50.0% | |
| !! | GGCTCTAATGGTGGGTGAAA+TGG | - | chr5_3:34668-34687 | Msa0789650:intron | 50.0% |
| CTTGGCAAGACTCGTTCCAT+TGG | - | chr5_3:34709-34728 | Msa0789650:intron | 50.0% | |
| GCAGCGCATAAATCACTGCA+AGG | + | chr5_3:35054-35073 | None:intergenic | 50.0% | |
| GCAGTGATTTATGCGCTGCT+TGG | - | chr5_3:35055-35074 | Msa0789650:CDS | 50.0% | |
| ! | ATGTAACCATGCGTCGGTGT+CGG | - | chr5_3:35978-35997 | Msa0789650:CDS | 50.0% |
| !! | CTCAGACCACGTATTGGTTG+GGG | - | chr5_3:36379-36398 | Msa0789650:intron | 50.0% |
| AAACAAGCCCCAAGTCTCGA+AGG | - | chr5_3:36775-36794 | Msa0789650:intron | 50.0% | |
| CACCTCTTTCTCCTCTCCTA+TGG | - | chr5_3:36820-36839 | Msa0789650:intron | 50.0% | |
| TGGAGGCTCTTCTAAGCTTG+TGG | - | chr5_3:37320-37339 | Msa0789650:intron | 50.0% | |
| GGAGGCTCTTCTAAGCTTGT+GGG | - | chr5_3:37321-37340 | Msa0789650:intron | 50.0% | |
| GCTTGTGGGTAATTCAGGTG+AGG | - | chr5_3:37335-37354 | Msa0789650:intron | 50.0% | |
| !! | GTTTCTTGCTATTGGGGGGA+TGG | - | chr5_3:37649-37668 | Msa0789650:intron | 50.0% |
| AATAGTCTCACTTGTGCCCC+CGG | + | chr5_3:38054-38073 | None:intergenic | 50.0% | |
| GTGTCAGTCACTATCCAGTG+TGG | - | chr5_3:38103-38122 | Msa0789650:intron | 50.0% | |
| GGGATCGTGGTTGCGATTCA+TGG | + | chr5_3:31727-31746 | None:intergenic | 55.0% | |
| ACTAAGTGGGGTCGGCTACA+TGG | + | chr5_3:32606-32625 | None:intergenic | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | - | chr5_3:32605-32624 | Msa0789650:intron | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | - | chr5_3:32606-32625 | Msa0789650:intron | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | - | chr5_3:32612-32631 | Msa0789650:intron | 55.0% | |
| GGTCCTAGGGGTTTCACAGA+AGG | + | chr5_3:33193-33212 | None:intergenic | 55.0% | |
| AAGGTCAAGAGCTAGCAGCG+TGG | - | chr5_3:33983-34002 | Msa0789650:intron | 55.0% | |
| AGGTCAAGAGCTAGCAGCGT+GGG | - | chr5_3:33984-34003 | Msa0789650:intron | 55.0% | |
| CAAGACTCGTTCCATTGGGC+AGG | - | chr5_3:34714-34733 | Msa0789650:intron | 55.0% | |
| CTCCTAGGATTAGGCGTGTC+CGG | + | chr5_3:36023-36042 | None:intergenic | 55.0% | |
| !! | CCAGCTGGTTCGGATGCCAA+CGG | + | chr5_3:33803-33822 | None:intergenic | 60.0% |
| ! | GCATCCGAACCAGCTGGCTT+TGG | - | chr5_3:33806-33825 | Msa0789650:intron | 60.0% |
| GTCTGTTGGATCAGAGGCGG+CGG | - | chr5_3:34923-34942 | Msa0789650:intron | 60.0% | |
| GGCCCCTCTATCGTGCTATG+AGG | - | chr5_3:35107-35126 | Msa0789650:intron | 60.0% | |
| TCATGTCCGACACCGACGCA+TGG | + | chr5_3:35987-36006 | None:intergenic | 60.0% | |
| CACCGGACACGCCTAATCCT+AGG | - | chr5_3:36018-36037 | Msa0789650:intron | 60.0% | |
| !! | GCTGGTTCGGATGCCAACGG+TGG | + | chr5_3:33800-33819 | None:intergenic | 65.0% |
| CCGTTGGCATCCGAACCAGC+TGG | - | chr5_3:33800-33819 | Msa0789650:intron | 65.0% | |
| GGGGGGATGGGTAGCTCACT+TGG | - | chr5_3:37662-37681 | Msa0789650:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 31586 | 38399 | 31586 | ID=Msa0789650;Name=Msa0789650 |
| chr5_3 | mRNA | 31586 | 38399 | 31586 | ID=Msa0789650-mRNA-1;Parent=Msa0789650;Name=Msa0789650-mRNA-1;_AED=0.29;_eAED=0.29;_QI=140|0.81|0.83|0.91|0.81|0.83|12|0|252 |
| chr5_3 | exon | 31586 | 31597 | 31586 | ID=Msa0789650-mRNA-1:exon:34;Parent=Msa0789650-mRNA-1 |
| chr5_3 | exon | 32634 | 32699 | 32634 | ID=Msa0789650-mRNA-1:exon:33;Parent=Msa0789650-mRNA-1 |
| chr5_3 | exon | 33585 | 33633 | 33585 | ID=Msa0789650-mRNA-1:exon:32;Parent=Msa0789650-mRNA-1 |
| chr5_3 | exon | 34472 | 34539 | 34472 | ID=Msa0789650-mRNA-1:exon:31;Parent=Msa0789650-mRNA-1 |
| chr5_3 | exon | 34625 | 34670 | 34625 | ID=Msa0789650-mRNA-1:exon:30;Parent=Msa0789650-mRNA-1 |
| chr5_3 | exon | 34857 | 34926 | 34857 | ID=Msa0789650-mRNA-1:exon:29;Parent=Msa0789650-mRNA-1 |
| chr5_3 | exon | 35041 | 35103 | 35041 | ID=Msa0789650-mRNA-1:exon:28;Parent=Msa0789650-mRNA-1 |
| chr5_3 | exon | 35480 | 35602 | 35480 | ID=Msa0789650-mRNA-1:exon:27;Parent=Msa0789650-mRNA-1 |
| chr5_3 | exon | 35715 | 35748 | 35715 | ID=Msa0789650-mRNA-1:exon:26;Parent=Msa0789650-mRNA-1 |
| chr5_3 | exon | 35953 | 36018 | 35953 | ID=Msa0789650-mRNA-1:exon:25;Parent=Msa0789650-mRNA-1 |
| chr5_3 | exon | 36111 | 36215 | 36111 | ID=Msa0789650-mRNA-1:exon:24;Parent=Msa0789650-mRNA-1 |
| chr5_3 | exon | 38203 | 38399 | 38203 | ID=Msa0789650-mRNA-1:exon:23;Parent=Msa0789650-mRNA-1 |
| chr5_3 | five_prime_UTR | 38260 | 38399 | 38260 | ID=Msa0789650-mRNA-1:five_prime_utr;Parent=Msa0789650-mRNA-1 |
| chr5_3 | CDS | 38203 | 38259 | 38203 | ID=Msa0789650-mRNA-1:cds;Parent=Msa0789650-mRNA-1 |
| chr5_3 | CDS | 36111 | 36215 | 36111 | ID=Msa0789650-mRNA-1:cds;Parent=Msa0789650-mRNA-1 |
| chr5_3 | CDS | 35953 | 36018 | 35953 | ID=Msa0789650-mRNA-1:cds;Parent=Msa0789650-mRNA-1 |
| chr5_3 | CDS | 35715 | 35748 | 35715 | ID=Msa0789650-mRNA-1:cds;Parent=Msa0789650-mRNA-1 |
| chr5_3 | CDS | 35480 | 35602 | 35480 | ID=Msa0789650-mRNA-1:cds;Parent=Msa0789650-mRNA-1 |
| chr5_3 | CDS | 35041 | 35103 | 35041 | ID=Msa0789650-mRNA-1:cds;Parent=Msa0789650-mRNA-1 |
| chr5_3 | CDS | 34857 | 34926 | 34857 | ID=Msa0789650-mRNA-1:cds;Parent=Msa0789650-mRNA-1 |
| chr5_3 | CDS | 34625 | 34670 | 34625 | ID=Msa0789650-mRNA-1:cds;Parent=Msa0789650-mRNA-1 |
| chr5_3 | CDS | 34472 | 34539 | 34472 | ID=Msa0789650-mRNA-1:cds;Parent=Msa0789650-mRNA-1 |
| chr5_3 | CDS | 33585 | 33633 | 33585 | ID=Msa0789650-mRNA-1:cds;Parent=Msa0789650-mRNA-1 |
| chr5_3 | CDS | 32634 | 32699 | 32634 | ID=Msa0789650-mRNA-1:cds;Parent=Msa0789650-mRNA-1 |
| chr5_3 | CDS | 31586 | 31597 | 31586 | ID=Msa0789650-mRNA-1:cds;Parent=Msa0789650-mRNA-1 |
| Gene Sequence |
| Protein sequence |
