AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1333970

Find 117 sgRNAs with CRISPR-Local

Find 307 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-GE

Chromosome Type Strat End Strand Name
chr8_4 gene 54219286 54223904 54219286 ID=Msa1333970;Name=Msa1333970
chr8_4 mRNA 54219286 54223904 54219286 ID=Msa1333970-mRNA-1;Parent=Msa1333970;Name=Msa1333970-mRNA-1;_AED=0.33;_eAED=0.34;_QI=0|0.75|0.77|1|0.87|0.88|9|594|354
chr8_4 exon 54219286 54219954 54219286 ID=Msa1333970-mRNA-1:exon:16851;Parent=Msa1333970-mRNA-1
chr8_4 exon 54220033 54220132 54220033 ID=Msa1333970-mRNA-1:exon:16850;Parent=Msa1333970-mRNA-1
chr8_4 exon 54220723 54220850 54220723 ID=Msa1333970-mRNA-1:exon:16849;Parent=Msa1333970-mRNA-1
chr8_4 exon 54220951 54221118 54220951 ID=Msa1333970-mRNA-1:exon:16848;Parent=Msa1333970-mRNA-1
chr8_4 exon 54221604 54221719 54221604 ID=Msa1333970-mRNA-1:exon:16847;Parent=Msa1333970-mRNA-1
chr8_4 exon 54222056 54222208 54222056 ID=Msa1333970-mRNA-1:exon:16846;Parent=Msa1333970-mRNA-1
chr8_4 exon 54222312 54222455 54222312 ID=Msa1333970-mRNA-1:exon:16845;Parent=Msa1333970-mRNA-1
chr8_4 exon 54222516 54222543 54222516 ID=Msa1333970-mRNA-1:exon:16844;Parent=Msa1333970-mRNA-1
chr8_4 exon 54223752 54223904 54223752 ID=Msa1333970-mRNA-1:exon:16843;Parent=Msa1333970-mRNA-1
chr8_4 CDS 54223752 54223904 54223752 ID=Msa1333970-mRNA-1:cds;Parent=Msa1333970-mRNA-1
chr8_4 CDS 54222516 54222543 54222516 ID=Msa1333970-mRNA-1:cds;Parent=Msa1333970-mRNA-1
chr8_4 CDS 54222312 54222455 54222312 ID=Msa1333970-mRNA-1:cds;Parent=Msa1333970-mRNA-1
chr8_4 CDS 54222056 54222208 54222056 ID=Msa1333970-mRNA-1:cds;Parent=Msa1333970-mRNA-1
chr8_4 CDS 54221604 54221719 54221604 ID=Msa1333970-mRNA-1:cds;Parent=Msa1333970-mRNA-1
chr8_4 CDS 54220951 54221118 54220951 ID=Msa1333970-mRNA-1:cds;Parent=Msa1333970-mRNA-1
chr8_4 CDS 54220723 54220850 54220723 ID=Msa1333970-mRNA-1:cds;Parent=Msa1333970-mRNA-1
chr8_4 CDS 54220033 54220132 54220033 ID=Msa1333970-mRNA-1:cds;Parent=Msa1333970-mRNA-1
chr8_4 CDS 54219880 54219954 54219880 ID=Msa1333970-mRNA-1:cds;Parent=Msa1333970-mRNA-1
chr8_4 three_prime_UTR 54219286 54219879 54219286 ID=Msa1333970-mRNA-1:three_prime_utr;Parent=Msa1333970-mRNA-1
Gene Sequence

>Msa1333970

ATGGGTTGTCACGGCAGCAAGGAGAAGAAACATGCCAAAGATGAGTTTACTGCCCGTCATCATAGATCATCACCTGCCCGTCCCGCTGCTGCACCCCCTTCTCGTCCCGCCGGTGTAGATAGTAATTATCGTTACATCAATGTTCCACCTCAGTTTCAAAGGAATTACATGTTGCTTCCTGGAAAAGTTTACCGTGATATGGTAGGCAGTGCTTACTATGTTGCCCCTGAGGTACTTCGTCGTAATTATGGAAAGGAAATAGACATTTGGAGTGCAGGCATCATATTGTATATTCTGCTTAGTGGTGTACCACCTTTTTGGGCTGAAACTGAAAAGGGAATATTTAATGCTATATTGGAAGGTGAACTCGACTTTGTTAGTGAACCATGGCCATCAATATCCGAAAGTGCCAAAGATCTAGTCCGGAAGATGCTGACACCAGATCCAAAGAAGAGAATCACTTCTACAGAAGTCCTTGAACACCCGTGGATGAGAGAAGGTGGAGAAGCCTCCGATAAACCGATTGATAGTGCAGTTCTATCTAGAATGAAACAATTCAGGGCAATGAACAAGTTCAAGAAACTTGCATTGAAGGTTATGGCTGAAAATTTATCAGAAGAAGAGATTAAAGGTCTCAAGGCAATGTTTGCAAACATGGACACTGATAGTAGTGGCACGATCACTTATGAAGAACTGAAGACAGGCTTGGCTCGAATTGGATCAAGACTGTCTGAGGCTGAAGTGAAACAGCTTATGGAAGCTGCTGATGTTGATGGAAATGGGTCGATTGACTATCTTGAATTCATATCGGCTACAATGCATAGGCACAGACTTGAGCGGGATGAACATCTTTACAAAGCATTCCAGTATTTTGATAAGGACAATAGTGGGCATATTACTAGAGAAGAATTGGAGACTGCCATGACAAAGCATGGAATGGGTGATGAAGCAACGATAAAGGAAATCATTTCTGAGGTGGATACAGATAATGATGGGAGAATAAATTATGAGGAATTCTGTGCAATGATGAGAAGTGGAATGCCACACCAGGGACCATTATTTTAA
Protein sequence

>Msa1333970

MGCHGSKEKKHAKDEFTARHHRSSPARPAAAPPSRPAGVDSNYRYINVPPQFQRNYMLLPGKVYRDMVGSAYYVAPEVLRRNYGKEIDIWSAGIILYILLSGVPPFWAETEKGIFNAILEGELDFVSEPWPSISESAKDLVRKMLTPDPKKRITSTEVLEHPWMREGGEASDKPIDSAVLSRMKQFRAMNKFKKLALKVMAENLSEEEIKGLKAMFANMDTDSSGTITYEELKTGLARIGSRLSEAEVKQLMEAADVDGNGSIDYLEFISATMHRHRLERDEHLYKAFQYFDKDNSGHITREELETAMTKHGMGDEATIKEIISEVDTDNDGRINYEEFCAMMRSGMPHQGPLF*