AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1333970


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1333970 MtrunA17_Chr4g0074811 97.030 303 9 0 52 354 237 539 0.0 608
Msa1333970 MtrunA17_Chr4g0074811 85.455 55 6 2 1 55 1 53 7.21e-23 99.8
Msa1333970 MtrunA17_Chr5g0444171 80.528 303 59 0 52 354 238 540 0.0 523
Msa1333970 MtrunA17_Chr3g0098951 79.032 310 57 2 52 354 230 538 1.71e-178 506
Msa1333970 MtrunA17_Chr4g0074791 77.228 303 58 2 52 354 242 533 4.50e-170 484
Msa1333970 MtrunA17_Chr1g0157131 75.593 295 72 0 52 346 220 514 6.20e-168 478
Msa1333970 MtrunA17_Chr8g0387671 73.064 297 80 0 52 348 212 508 4.57e-163 466
Msa1333970 MtrunA17_Chr5g0397101 72.391 297 81 1 52 348 213 508 3.99e-160 458
Msa1333970 MtrunA17_Chr0c02g0489761 70.486 288 85 0 61 348 233 520 4.54e-151 436
Msa1333970 MtrunA17_Chr5g0441691 71.181 288 83 0 61 348 223 510 2.07e-150 434
Msa1333970 MtrunA17_Chr1g0170281 61.794 301 113 2 52 351 264 563 1.81e-135 398
Msa1333970 MtrunA17_Chr5g0448721 62.373 295 110 1 52 346 242 535 6.03e-133 390
Msa1333970 MtrunA17_Chr1g0176751 61.333 300 115 1 52 351 270 568 8.10e-132 389
Msa1333970 MtrunA17_Chr8g0385341 64.808 287 100 1 60 346 184 469 1.46e-131 385
Msa1333970 MtrunA17_Chr1g0200601 62.369 287 107 1 60 346 184 469 1.63e-131 385
Msa1333970 MtrunA17_Chr3g0131181 62.369 287 107 1 60 346 183 468 4.81e-130 382
Msa1333970 MtrunA17_Chr1g0176421 56.308 325 109 2 52 344 307 630 3.84e-128 381
Msa1333970 MtrunA17_Chr4g0059951 58.784 296 121 1 52 346 219 514 3.34e-125 370
Msa1333970 MtrunA17_Chr7g0267751 56.610 295 127 1 52 346 281 574 4.58e-121 362
Msa1333970 MtrunA17_Chr7g0242561 53.716 296 136 1 52 346 202 497 7.21e-115 343
Msa1333970 MtrunA17_Chr1g0173541 51.389 288 139 1 60 346 206 493 5.08e-108 326
Msa1333970 MtrunA17_Chr4g0033371 49.831 295 148 0 52 346 218 512 1.56e-106 322
Msa1333970 MtrunA17_Chr7g0257751 49.662 296 148 1 52 346 204 499 2.35e-105 319
Msa1333970 MtrunA17_Chr5g0405421 43.878 294 153 3 60 346 255 543 4.40e-84 265
Msa1333970 MtrunA17_Chr5g0444191 75.200 125 28 1 58 182 60 181 2.57e-64 203
Msa1333970 MtrunA17_Chr8g0374701 33.910 289 182 4 60 343 286 570 2.61e-56 192
Msa1333970 MtrunA17_Chr4g0045261 33.564 289 183 4 60 343 295 579 6.36e-56 192
Msa1333970 MtrunA17_Chr5g0402551 33.216 283 180 4 66 343 298 576 1.83e-53 185
Msa1333970 MtrunA17_Chr7g0256001 33.910 289 183 3 60 343 299 584 1.58e-52 183
Msa1333970 MtrunA17_Chr7g0267771 47.475 198 95 2 52 249 234 422 2.12e-52 180
Msa1333970 MtrunA17_Chr7g0276111 32.248 307 191 7 52 348 294 593 4.91e-49 173
Msa1333970 MtrunA17_Chr3g0127571 36.863 255 153 4 60 309 296 547 1.17e-48 172
Msa1333970 MtrunA17_Chr8g0355131 30.164 305 182 7 67 344 208 508 3.89e-37 140
Msa1333970 MtrunA17_Chr1g0203881 55.238 105 47 0 60 164 195 299 3.85e-34 131
Msa1333970 MtrunA17_Chr5g0441771 57.692 104 24 1 130 233 18 101 6.93e-31 113
Msa1333970 MtrunA17_Chr1g0190131 45.946 111 59 1 61 170 160 270 4.89e-30 115
Msa1333970 MtrunA17_Chr5g0441781 68.421 76 24 0 273 348 1 76 5.71e-30 110
Msa1333970 MtrunA17_Chr5g0440931 40.136 147 84 3 200 343 1 146 3.53e-27 104
Msa1333970 MtrunA17_Chr3g0093271 39.456 147 85 3 200 343 52 197 8.72e-27 105
Msa1333970 MtrunA17_Chr6g0460211 39.456 147 85 3 200 343 1 146 1.01e-26 103
Msa1333970 MtrunA17_Chr7g0254731 38.776 147 86 3 200 343 1 146 1.80e-26 102
Msa1333970 MtrunA17_Chr1g0166281 37.584 149 89 3 200 345 1 148 5.12e-26 101
Msa1333970 MtrunA17_Chr3g0132591 45.192 104 57 0 61 164 257 360 3.09e-24 103
Msa1333970 MtrunA17_Chr1g0188171 36.242 149 91 3 200 345 1 148 1.33e-23 95.1
Msa1333970 MtrunA17_Chr7g0274941 40.351 114 66 1 61 172 169 282 1.51e-23 99.0
Msa1333970 MtrunA17_Chr1g0185001 33.562 146 94 2 200 343 1 145 6.09e-21 87.8
Msa1333970 MtrunA17_Chr4g0062221 36.364 143 83 3 207 343 7 147 2.09e-19 84.3
Msa1333970 MtrunA17_Chr4g0033601 35.461 141 83 4 212 346 6 144 2.75e-19 83.6
Msa1333970 MtrunA17_Chr4g0001331 38.760 129 67 4 41 167 159 277 2.31e-18 85.9
Msa1333970 MtrunA17_Chr4g0069301 37.705 122 64 5 48 167 173 284 2.36e-18 85.9
Msa1333970 MtrunA17_Chr5g0434951 37.226 137 77 4 212 343 5 137 5.88e-18 79.7
Msa1333970 MtrunA17_Chr8g0351491 36.190 105 64 2 65 168 169 271 6.13e-18 82.8
Msa1333970 MtrunA17_Chr8g0391691 36.111 144 82 4 212 349 37 176 1.05e-17 80.1
Msa1333970 MtrunA17_Chr7g0245231 34.483 145 91 3 204 345 23 166 1.98e-17 79.0
Msa1333970 MtrunA17_Chr3g0125381 36.190 105 64 2 65 168 108 210 2.41e-17 79.7
Msa1333970 MtrunA17_Chr3g0140631 37.037 108 65 2 65 171 190 295 2.73e-17 81.3
Msa1333970 MtrunA17_Chr1g0205421 37.607 117 61 4 53 167 163 269 2.03e-16 80.1
Msa1333970 MtrunA17_Chr1g0169581 34.752 141 78 4 212 343 5 140 2.24e-16 75.1
Msa1333970 MtrunA17_Chr1g0150321 41.176 102 54 4 68 167 173 270 4.14e-16 79.0
Msa1333970 MtrunA17_Chr8g0368681 32.414 145 90 3 205 343 6 148 4.57e-16 75.1
Msa1333970 MtrunA17_Chr2g0304111 37.069 116 62 5 59 167 170 281 5.16e-16 79.0
Msa1333970 MtrunA17_Chr4g0064231 34.194 155 82 3 212 346 65 219 5.29e-16 76.3
Msa1333970 MtrunA17_Chr8g0353621 35.644 101 62 2 65 164 163 261 6.26e-16 77.0
Msa1333970 MtrunA17_Chr8g0366401 31.333 150 94 3 204 346 10 157 6.52e-16 74.7
Msa1333970 MtrunA17_Chr7g0256171 34.286 140 86 3 212 346 6 144 9.00e-16 73.9
Msa1333970 MtrunA17_Chr8g0346071 41.121 107 57 4 63 167 171 273 1.20e-15 77.8
Msa1333970 MtrunA17_Chr6g0450921 35.417 144 84 5 212 349 30 170 1.29e-15 73.9
Msa1333970 MtrunA17_Chr8g0392951 33.803 142 87 4 212 349 25 163 1.61e-15 73.6
Msa1333970 MtrunA17_Chr6g0482731 34.559 136 83 3 212 343 27 160 1.63e-15 73.6
Msa1333970 MtrunA17_Chr3g0111371 34.028 144 82 5 204 343 1 135 1.99e-15 72.4
Msa1333970 MtrunA17_Chr4g0063881 42.157 102 53 4 68 167 170 267 3.16e-15 76.6
Msa1333970 MtrunA17_Chr2g0329371 31.915 141 90 2 212 346 65 205 4.21e-15 73.6
Msa1333970 MtrunA17_Chr4g0044961 28.409 176 120 3 177 349 23 195 5.01e-15 72.8
Msa1333970 MtrunA17_Chr7g0244561 32.374 139 81 6 60 192 170 301 5.87e-15 75.5
Msa1333970 MtrunA17_Chr1g0161211 35.294 136 82 3 212 343 47 180 7.19e-15 72.4
Msa1333970 MtrunA17_Chr6g0453681 38.318 107 60 2 61 165 170 272 1.02e-14 75.1
Msa1333970 MtrunA17_Chr6g0468751 28.365 208 112 6 61 255 170 353 1.02e-14 75.1
Msa1333970 MtrunA17_Chr7g0245911 33.333 147 85 4 212 346 48 193 1.15e-14 72.0
Msa1333970 MtrunA17_Chr8g0346081 39.815 108 59 4 62 167 170 273 1.87e-14 74.3
Msa1333970 MtrunA17_Chr4g0008561 32.500 120 78 3 58 175 169 287 2.32e-14 74.3
Msa1333970 MtrunA17_Chr5g0398751 32.653 147 93 4 200 343 1 144 2.49e-14 69.7
Msa1333970 MtrunA17_Chr2g0333821 35.659 129 71 5 41 167 153 271 2.54e-14 73.9
Msa1333970 MtrunA17_Chr4g0013131 39.091 110 58 5 68 175 172 274 2.83e-14 73.6
Msa1333970 MtrunA17_Chr3g0100541 30.464 151 90 2 197 346 38 174 3.14e-14 70.1
Msa1333970 MtrunA17_Chr3g0132671 36.697 109 63 2 61 167 200 304 3.33e-14 73.6
Msa1333970 MtrunA17_Chr3g0125311 33.784 148 80 4 212 343 14 159 4.45e-14 69.3
Msa1333970 MtrunA17_Chr2g0284011 33.945 109 66 3 68 174 172 276 5.19e-14 72.8
Msa1333970 MtrunA17_Chr2g0302431 37.255 102 58 4 68 167 181 278 5.45e-14 72.8
Msa1333970 MtrunA17_Chr6g0453671 38.318 107 60 2 61 165 170 272 5.52e-14 72.4
Msa1333970 MtrunA17_Chr5g0441011 38.614 101 56 4 68 166 174 270 6.05e-14 72.8
Msa1333970 MtrunA17_Chr5g0432491 37.864 103 58 4 67 167 183 281 6.85e-14 72.4
Msa1333970 MtrunA17_Chr6g0478601 37.273 110 56 4 65 166 298 402 1.24e-13 72.0
Msa1333970 MtrunA17_Chr5g0399911 35.577 104 63 3 65 164 172 275 1.42e-13 70.9
Msa1333970 MtrunA17_Chr7g0274101 32.653 147 95 3 200 343 1 146 1.90e-13 67.4
Msa1333970 MtrunA17_Chr7g0244521 37.273 110 60 4 68 175 172 274 2.28e-13 70.9
Msa1333970 MtrunA17_Chr3g0131061 33.654 104 65 3 65 164 157 260 4.63e-13 69.3
Msa1333970 MtrunA17_Chr8g0380661 35.185 108 56 5 65 163 154 256 5.91e-13 68.9
Msa1333970 MtrunA17_Chr4g0057651 33.071 127 80 2 220 343 15 139 6.33e-13 65.5
Msa1333970 MtrunA17_Chr8g0338741 29.814 161 95 5 6 165 201 344 8.99e-13 68.9
Msa1333970 MtrunA17_Chr3g0131501 29.655 145 95 3 196 339 19 157 1.13e-12 68.9
Msa1333970 MtrunA17_Chr8g0369111 26.087 184 111 3 178 339 28 208 1.41e-12 66.6
Msa1333970 MtrunA17_Chr1g0160151 32.877 146 76 5 212 343 23 160 1.42e-12 65.1
Msa1333970 MtrunA17_Chr8g0381821 35.577 104 63 3 65 164 157 260 1.54e-12 67.8
Msa1333970 MtrunA17_Chr8g0385571 28.302 159 106 4 196 353 41 192 1.55e-12 68.6
Msa1333970 MtrunA17_Chr4g0057661 33.071 127 80 2 220 343 15 139 1.61e-12 64.3
Msa1333970 MtrunA17_Chr5g0428981 36.792 106 62 3 65 166 949 1053 1.65e-12 68.9
Msa1333970 MtrunA17_Chr1g0170551 34.286 105 64 3 63 166 159 259 1.65e-12 68.9
Msa1333970 MtrunA17_Chr8g0385281 33.654 104 65 3 65 164 158 261 2.47e-12 67.4
Msa1333970 MtrunA17_Chr8g0373691 28.105 153 104 3 195 343 37 187 2.49e-12 65.1
Msa1333970 MtrunA17_Chr2g0277501 33.654 104 65 3 65 164 157 260 2.63e-12 67.0
Msa1333970 MtrunA17_Chr7g0256701 31.206 141 86 4 212 343 74 212 2.65e-12 65.5
Msa1333970 MtrunA17_Chr7g0245371 28.378 148 92 2 212 345 25 172 2.67e-12 64.7
Msa1333970 MtrunA17_Chr4g0018201 36.792 106 62 3 65 166 945 1049 2.85e-12 68.2
Msa1333970 MtrunA17_Chr2g0284031 31.776 107 67 4 63 167 186 288 3.17e-12 67.4
Msa1333970 MtrunA17_Chr4g0057641 31.061 132 86 2 215 343 10 139 3.99e-12 63.2
Msa1333970 MtrunA17_Chr4g0055451 35.238 105 62 4 65 164 158 261 5.89e-12 65.9
Msa1333970 MtrunA17_Chr5g0402361 29.412 136 95 1 212 346 49 184 6.18e-12 66.2
Msa1333970 MtrunA17_Chr8g0351681 29.139 151 97 3 207 347 45 195 7.59e-12 63.9
Msa1333970 MtrunA17_Chr7g0225921 30.827 133 86 3 215 343 10 140 8.17e-12 62.4
Msa1333970 MtrunA17_Chr2g0299781 32.374 139 81 5 39 166 286 422 1.03e-11 65.9
Msa1333970 MtrunA17_Chr3g0100511 27.517 149 93 2 197 344 38 172 1.37e-11 62.8
Msa1333970 MtrunA17_Chr1g0153321 40.385 104 53 5 68 165 309 409 1.44e-11 65.5
Msa1333970 MtrunA17_Chr3g0123791 34.615 104 64 3 65 164 158 261 2.04e-11 64.3
Msa1333970 MtrunA17_Chr7g0227331 32.692 104 63 3 67 165 472 573 2.65e-11 64.7
Msa1333970 MtrunA17_Chr1g0167311 36.275 102 59 4 68 165 316 415 5.45e-11 63.9
Msa1333970 MtrunA17_Chr5g0402331 29.197 137 95 2 212 346 49 185 5.57e-11 61.2
Msa1333970 MtrunA17_Chr5g0426521 33.945 109 58 4 65 164 157 260 6.75e-11 62.8
Msa1333970 MtrunA17_Chr7g0234641 38.235 102 53 3 67 165 241 335 7.88e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1333970 AT4G04720.2 81.250 304 55 2 52 354 226 528 0.0 518
Msa1333970 AT4G04720.1 81.250 304 55 2 52 354 226 528 0.0 518
Msa1333970 AT4G21940.1 79.344 305 60 2 52 354 248 551 0.0 514
Msa1333970 AT3G20410.2 79.264 299 62 0 52 350 237 535 0.0 513
Msa1333970 AT3G20410.1 79.264 299 62 0 52 350 237 535 0.0 513
Msa1333970 AT4G21940.2 79.344 305 60 2 52 354 248 551 0.0 513
Msa1333970 AT1G50700.1 78.878 303 64 0 52 354 219 521 0.0 511
Msa1333970 AT1G50700.2 72.644 329 64 1 52 354 219 547 5.95e-175 497
Msa1333970 AT1G61950.1 75.850 294 70 1 61 353 254 547 1.64e-165 474
Msa1333970 AT1G76040.1 72.727 297 80 1 56 352 24 319 2.06e-164 462
Msa1333970 AT1G76040.4 72.727 297 80 1 56 352 24 319 2.06e-164 462
Msa1333970 AT1G76040.2 73.973 292 75 1 61 352 267 557 2.71e-160 461
Msa1333970 AT4G04740.4 74.825 286 71 1 61 346 224 508 4.63e-160 459
Msa1333970 AT4G04740.6 74.825 286 71 1 61 346 224 508 4.63e-160 459
Msa1333970 AT4G04740.5 74.825 286 71 1 61 346 224 508 4.63e-160 459
Msa1333970 AT4G04740.3 74.825 286 71 1 61 346 224 508 4.63e-160 459
Msa1333970 AT4G04740.1 74.825 286 71 1 61 346 224 508 4.63e-160 459
Msa1333970 AT4G04740.7 74.825 286 71 1 61 346 224 508 4.63e-160 459
Msa1333970 AT4G23650.1 70.100 301 90 0 52 352 224 524 7.55e-159 456
Msa1333970 AT5G19360.1 70.307 293 87 0 60 352 222 514 4.41e-152 438
Msa1333970 AT5G12180.1 69.966 293 88 0 60 352 227 519 5.46e-151 436
Msa1333970 AT4G04740.2 74.815 270 67 1 61 330 224 492 1.41e-149 432
Msa1333970 AT4G04710.2 71.769 294 74 3 61 353 195 480 4.46e-149 429
Msa1333970 AT4G04710.3 71.769 294 74 3 61 353 181 466 4.49e-149 429
Msa1333970 AT4G04710.1 68.387 310 88 3 52 353 186 493 2.32e-148 428
Msa1333970 AT4G21940.3 83.966 237 37 1 61 297 257 492 1.63e-147 426
Msa1333970 AT1G50700.3 80.894 246 47 0 52 297 219 464 1.73e-147 425
Msa1333970 AT4G04710.4 67.949 312 88 4 52 353 186 495 2.92e-146 423
Msa1333970 AT4G04695.1 66.221 299 100 1 52 350 178 475 6.99e-141 409
Msa1333970 AT5G04870.1 62.583 302 112 1 52 353 296 596 6.60e-136 400
Msa1333970 AT4G04700.1 63.607 305 108 2 52 354 178 481 9.83e-136 395
Msa1333970 AT2G17290.1 62.373 295 110 1 52 346 231 524 1.37e-135 397
Msa1333970 AT2G17290.2 62.373 295 110 1 52 346 231 524 1.37e-135 397
Msa1333970 AT3G10660.2 62.252 302 113 1 52 353 332 632 1.75e-134 398
Msa1333970 AT3G10660.1 62.252 302 113 1 52 353 332 632 1.75e-134 398
Msa1333970 AT1G76040.3 75.314 239 58 1 61 299 267 504 1.15e-131 386
Msa1333970 AT4G38230.1 59.122 296 120 1 52 347 26 320 2.71e-131 379
Msa1333970 AT2G38910.1 60.751 293 114 1 52 344 280 571 1.73e-130 385
Msa1333970 AT4G35310.2 60.339 295 116 1 52 346 243 536 6.14e-130 383
Msa1333970 AT4G35310.1 60.339 295 116 1 52 346 243 536 6.14e-130 383
Msa1333970 AT4G38230.4 59.122 296 120 1 52 347 170 464 1.17e-129 380
Msa1333970 AT4G38230.3 59.122 296 120 1 52 347 170 464 1.17e-129 380
Msa1333970 AT1G35670.1 62.021 287 108 1 60 346 180 465 3.51e-129 379
Msa1333970 AT4G38230.2 59.122 296 120 1 52 347 200 494 3.98e-129 380
Msa1333970 AT4G09570.1 61.324 287 110 1 60 346 179 464 1.65e-127 375
Msa1333970 AT5G23580.1 58.362 293 121 1 52 344 168 459 1.05e-123 365
Msa1333970 AT3G51850.1 54.054 296 135 1 52 346 200 495 1.88e-116 348
Msa1333970 AT1G74740.1 53.378 296 137 1 52 346 205 500 6.46e-114 342
Msa1333970 AT1G18890.1 53.041 296 138 1 52 346 209 504 1.86e-111 335
Msa1333970 AT5G12480.2 51.515 297 142 1 52 346 111 407 6.59e-111 330
Msa1333970 AT5G12480.1 51.515 297 142 1 52 346 205 501 1.14e-109 330
Msa1333970 AT5G19450.2 51.178 297 143 2 52 346 203 499 8.92e-108 325
Msa1333970 AT5G19450.1 51.178 297 143 2 52 346 203 499 8.92e-108 325
Msa1333970 AT3G51850.2 53.047 279 130 1 52 329 200 478 1.27e-106 322
Msa1333970 AT3G57530.1 49.831 295 148 0 52 346 209 503 2.33e-105 320
Msa1333970 AT2G31500.1 49.164 299 148 1 52 346 212 510 3.64e-103 315
Msa1333970 AT2G41860.1 49.662 296 148 1 52 346 200 495 4.87e-103 313
Msa1333970 AT2G41860.2 49.662 296 148 1 52 346 200 495 8.73e-103 313
Msa1333970 AT2G17890.1 43.098 297 157 3 57 346 261 552 2.68e-83 264
Msa1333970 AT2G35890.2 51.724 232 111 1 52 282 278 509 1.22e-82 260
Msa1333970 AT2G35890.1 51.724 232 111 1 52 282 278 509 1.22e-82 260
Msa1333970 AT3G51850.3 53.456 217 101 0 52 268 200 416 4.55e-82 256
Msa1333970 AT5G66210.1 42.517 294 157 4 60 346 218 506 7.44e-81 256
Msa1333970 AT5G66210.2 42.517 294 157 4 60 346 218 506 7.44e-81 256
Msa1333970 AT4G36070.1 41.497 294 160 3 60 346 227 515 1.97e-79 253
Msa1333970 AT4G36070.2 41.497 294 160 3 60 346 227 515 5.43e-79 252
Msa1333970 AT5G66210.3 45.098 255 133 3 60 307 218 472 1.95e-75 241
Msa1333970 AT5G66210.5 45.238 252 131 3 60 304 218 469 3.84e-75 240
Msa1333970 AT3G57530.2 51.208 207 101 0 52 258 209 415 1.73e-73 234
Msa1333970 AT5G66210.6 46.701 197 104 1 60 255 218 414 2.65e-61 202
Msa1333970 AT5G66210.4 46.701 197 104 1 60 255 218 414 2.65e-61 202
Msa1333970 AT3G50530.1 32.872 289 185 4 60 343 306 590 2.10e-56 194
Msa1333970 AT3G50530.2 33.216 283 180 4 66 343 343 621 5.85e-56 193
Msa1333970 AT3G19100.1 33.564 289 183 4 60 343 302 586 8.56e-54 187
Msa1333970 AT1G49580.1 32.526 289 187 3 60 343 308 593 1.20e-53 186
Msa1333970 AT2G41140.1 32.180 289 187 4 60 343 281 565 1.89e-49 174
Msa1333970 AT3G56760.1 31.834 289 188 4 60 343 282 566 1.20e-48 172
Msa1333970 AT3G49370.1 34.420 276 168 6 66 336 306 573 5.99e-45 162
Msa1333970 AT2G46700.2 32.362 309 193 6 40 343 104 401 3.43e-44 157
Msa1333970 AT2G46700.3 32.362 309 193 6 40 343 104 401 3.43e-44 157
Msa1333970 AT2G46700.1 32.362 309 193 6 40 343 285 582 2.43e-43 158
Msa1333970 AT5G24430.1 34.940 249 154 4 66 309 307 552 4.18e-43 157
Msa1333970 AT1G12580.1 48.718 117 60 0 60 176 198 314 6.98e-34 131
Msa1333970 AT1G08650.1 40.800 125 73 1 52 175 160 284 2.59e-29 114
Msa1333970 AT1G12680.1 49.038 104 53 0 61 164 252 355 1.35e-27 113
Msa1333970 AT1G66410.1 40.136 147 84 3 200 343 1 146 3.68e-27 105
Msa1333970 AT5G37780.1 40.136 147 84 3 200 343 1 146 3.68e-27 105
Msa1333970 AT5G21274.1 39.456 147 85 3 200 343 1 146 8.73e-27 103
Msa1333970 AT3G56800.1 39.456 147 85 3 200 343 1 146 1.09e-26 103
Msa1333970 AT2G41110.1 39.456 147 85 3 200 343 1 146 1.09e-26 103
Msa1333970 AT2G27030.1 39.456 147 85 3 200 343 1 146 1.09e-26 103
Msa1333970 AT3G43810.1 39.456 147 85 3 200 343 1 146 1.39e-26 103
Msa1333970 AT2G27030.3 39.456 147 85 3 200 343 1 146 1.91e-26 104
Msa1333970 AT3G43810.2 39.456 147 85 3 200 343 1 146 4.02e-26 104
Msa1333970 AT3G04530.1 45.045 111 60 1 59 168 163 273 9.69e-26 104
Msa1333970 AT2G41110.2 36.025 161 87 4 200 345 1 160 9.72e-24 96.3
Msa1333970 AT5G37780.2 36.420 162 84 4 200 343 1 161 2.41e-23 95.5
Msa1333970 AT1G08650.2 39.655 116 67 2 52 166 160 273 3.52e-23 97.8
Msa1333970 AT3G59440.1 37.681 138 83 1 212 346 52 189 1.42e-22 94.4
Msa1333970 AT1G66410.2 37.580 157 84 4 200 343 1 156 1.98e-22 92.8
Msa1333970 AT5G37780.3 34.682 173 83 4 200 343 1 172 3.11e-22 92.8
Msa1333970 AT3G22930.1 36.364 143 87 3 204 343 28 169 5.93e-22 92.0
Msa1333970 AT5G37780.4 40.984 122 68 3 225 343 13 133 1.08e-21 90.1
Msa1333970 AT4G14640.1 36.806 144 85 4 204 343 6 147 1.70e-20 87.4
Msa1333970 AT1G05990.1 36.429 140 84 2 212 346 6 145 1.78e-20 87.0
Msa1333970 AT2G43290.1 35.417 144 84 2 212 346 66 209 1.88e-20 89.0
Msa1333970 AT2G41100.7 31.953 169 96 3 198 347 53 221 4.09e-20 89.7
Msa1333970 AT2G41100.7 33.083 133 70 5 239 352 5 137 1.13e-12 68.2
Msa1333970 AT2G41100.6 31.953 169 96 3 198 347 53 221 4.09e-20 89.7
Msa1333970 AT2G41100.6 33.083 133 70 5 239 352 5 137 1.13e-12 68.2
Msa1333970 AT2G41100.3 31.953 169 96 3 198 347 53 221 4.09e-20 89.7
Msa1333970 AT2G41100.3 33.083 133 70 5 239 352 5 137 1.13e-12 68.2
Msa1333970 AT2G41100.4 31.953 169 96 3 198 347 88 256 6.90e-20 89.4
Msa1333970 AT2G41100.4 32.558 172 97 5 200 352 1 172 4.30e-19 87.4
Msa1333970 AT2G41100.1 31.953 169 96 3 198 347 88 256 6.90e-20 89.4
Msa1333970 AT2G41100.1 32.558 172 97 5 200 352 1 172 4.30e-19 87.4
Msa1333970 AT3G50360.1 35.417 144 89 3 204 344 20 162 8.23e-19 83.2
Msa1333970 AT1G66410.4 40.741 108 60 3 239 343 4 110 1.17e-18 80.9
Msa1333970 AT1G66410.3 40.741 108 60 3 239 343 4 110 1.17e-18 80.9
Msa1333970 AT1G32250.1 31.847 157 95 3 200 346 5 159 1.78e-18 82.0
Msa1333970 AT3G43810.4 40.741 108 60 3 239 343 4 110 1.91e-18 80.5
Msa1333970 AT3G43810.3 40.741 108 60 3 239 343 4 110 1.91e-18 80.5
Msa1333970 AT2G45490.1 38.614 101 59 2 65 164 175 273 4.46e-18 84.0
Msa1333970 AT1G18530.1 34.028 144 87 3 206 343 2 143 8.52e-18 80.1
Msa1333970 AT2G41090.1 34.247 146 91 3 200 343 1 143 8.93e-18 80.9
Msa1333970 AT4G14640.2 38.211 123 70 4 225 343 9 129 9.07e-18 79.3
Msa1333970 AT4G03290.1 33.099 142 88 2 212 346 6 147 1.60e-17 79.3
Msa1333970 AT3G25600.1 33.333 150 92 3 200 343 1 148 1.81e-17 79.3
Msa1333970 AT1G30270.3 37.815 119 63 5 59 170 81 195 2.51e-17 82.8
Msa1333970 AT1G30270.1 37.815 119 63 5 59 170 178 292 3.43e-17 82.8
Msa1333970 AT1G30270.2 37.815 119 63 5 59 170 178 292 4.28e-17 82.8
Msa1333970 AT2G25090.1 42.574 101 52 4 68 166 184 280 6.66e-17 82.0
Msa1333970 AT2G25880.4 37.037 108 65 2 65 171 191 296 1.33e-16 79.7
Msa1333970 AT2G25880.2 37.037 108 65 2 65 171 146 251 1.47e-16 79.0
Msa1333970 AT2G25880.1 37.037 108 65 2 65 171 178 283 1.60e-16 79.3
Msa1333970 AT5G25110.1 39.130 115 59 4 59 166 189 299 1.62e-16 80.9
Msa1333970 AT5G10930.1 35.652 115 63 4 59 166 159 269 2.06e-16 80.5
Msa1333970 AT1G66400.1 32.903 155 89 5 200 343 1 151 2.09e-16 76.3
Msa1333970 AT4G32830.1 37.963 108 64 2 65 171 184 289 2.45e-16 79.0
Msa1333970 AT4G12860.1 34.532 139 87 2 212 346 6 144 2.66e-16 75.9
Msa1333970 AT2G25880.3 37.037 108 65 2 65 171 239 344 3.53e-16 79.0
Msa1333970 AT4G37010.1 32.877 146 90 4 204 344 20 162 5.52e-16 75.1
Msa1333970 AT4G37010.2 32.877 146 90 4 204 344 24 166 6.21e-16 75.1
Msa1333970 AT5G39440.1 40.000 105 58 2 61 164 170 270 6.28e-16 79.3
Msa1333970 AT2G15680.1 31.034 145 94 3 204 345 43 184 7.07e-16 75.5
Msa1333970 AT1G45160.2 36.585 123 63 5 51 165 841 956 1.44e-15 78.6
Msa1333970 AT4G30960.1 35.897 117 68 5 68 181 184 296 1.45e-15 77.8
Msa1333970 AT3G01090.3 39.252 107 59 2 61 165 170 272 1.80e-15 77.8
Msa1333970 AT3G01090.1 39.252 107 59 2 61 165 170 272 1.80e-15 77.8
Msa1333970 AT1G45160.1 36.585 123 63 5 51 165 841 956 2.00e-15 78.2
Msa1333970 AT3G01090.2 39.252 107 59 2 61 165 193 295 2.01e-15 77.8
Msa1333970 AT1G24620.1 34.266 143 88 3 208 346 34 174 2.11e-15 73.9
Msa1333970 AT3G07490.1 34.286 140 86 3 212 346 6 144 2.22e-15 73.2
Msa1333970 AT5G62310.1 38.889 108 53 4 67 166 943 1045 2.96e-15 77.8
Msa1333970 AT5G37770.1 32.168 143 87 4 212 346 18 158 3.05e-15 73.2
Msa1333970 AT5G37770.2 32.168 143 87 4 212 346 18 158 3.05e-15 73.2
Msa1333970 AT2G30360.1 32.143 140 84 5 60 192 175 310 5.12e-15 76.3
Msa1333970 AT3G51920.1 31.507 146 98 2 200 343 1 146 9.73e-15 71.2
Msa1333970 AT3G29160.3 39.252 107 59 2 61 165 171 273 2.15e-14 73.9
Msa1333970 AT3G29160.1 39.252 107 59 2 61 165 171 273 2.98e-14 74.3
Msa1333970 AT3G29160.2 39.252 107 59 2 61 165 171 273 2.98e-14 74.3
Msa1333970 AT4G26470.1 25.604 207 129 4 153 339 5 206 3.31e-14 71.6
Msa1333970 AT1G01140.3 37.255 102 58 4 68 167 180 277 3.67e-14 73.6
Msa1333970 AT4G26470.3 25.561 223 139 5 139 339 52 269 3.78e-14 72.4
Msa1333970 AT1G01140.1 37.255 102 58 4 68 167 180 277 3.87e-14 73.6
Msa1333970 AT2G26980.1 39.604 101 55 4 68 166 175 271 4.25e-14 73.2
Msa1333970 AT1G01140.2 35.294 102 62 3 68 167 180 279 5.35e-14 73.2
Msa1333970 AT5G58380.1 35.965 114 67 4 68 179 172 281 6.82e-14 73.2
Msa1333970 AT4G40010.1 39.252 107 61 4 65 167 157 263 7.60e-14 72.4
Msa1333970 AT2G36180.1 28.369 141 92 3 212 345 1 139 7.95e-14 68.6
Msa1333970 AT1G73630.1 31.387 137 86 4 212 345 21 152 9.53e-14 68.9
Msa1333970 AT1G18210.2 32.331 133 86 3 212 343 24 153 1.19e-13 68.9
Msa1333970 AT1G18210.1 32.331 133 86 3 212 343 24 153 1.19e-13 68.9
Msa1333970 AT3G22930.2 34.314 102 66 1 204 304 28 129 1.29e-13 67.8
Msa1333970 AT5G01810.1 34.314 102 61 3 68 167 172 269 1.34e-13 72.0
Msa1333970 AT5G01810.2 34.314 102 61 3 68 167 172 269 1.34e-13 72.0
Msa1333970 AT5G01810.3 34.314 102 61 3 68 167 172 269 1.34e-13 71.6
Msa1333970 AT5G57630.3 28.283 198 122 6 61 255 74 254 1.39e-13 71.2
Msa1333970 AT5G42380.1 31.206 141 90 3 209 344 47 185 1.50e-13 68.9
Msa1333970 AT4G18700.1 35.514 107 63 4 63 167 181 283 1.55e-13 72.0
Msa1333970 AT1G48490.4 37.273 110 56 4 65 166 1010 1114 1.81e-13 72.4
Msa1333970 AT1G48490.3 37.273 110 56 4 65 166 1009 1113 2.01e-13 72.0
Msa1333970 AT1G48490.2 37.273 110 56 4 65 166 1009 1113 2.01e-13 72.0
Msa1333970 AT1G48490.1 37.273 110 56 4 65 166 1009 1113 2.01e-13 72.0
Msa1333970 AT5G35410.2 37.736 106 60 4 62 165 164 265 2.24e-13 70.9
Msa1333970 AT5G21326.1 38.614 101 56 4 68 166 174 270 2.48e-13 71.2
Msa1333970 AT3G61960.1 34.188 117 75 2 58 172 160 276 2.70e-13 71.2
Msa1333970 AT3G17510.2 26.222 225 124 6 68 263 101 312 2.72e-13 70.9
Msa1333970 AT3G17510.1 26.222 225 124 6 68 263 181 392 2.80e-13 70.9
Msa1333970 AT3G61960.2 34.188 117 75 2 58 172 160 276 3.02e-13 71.2
Msa1333970 AT5G35410.1 37.736 106 60 4 62 165 164 265 3.94e-13 70.5
Msa1333970 AT3G17850.1 37.273 110 56 4 65 166 1069 1173 4.00e-13 71.2
Msa1333970 AT5G57630.2 28.788 198 121 7 61 255 162 342 4.31e-13 70.5
Msa1333970 AT5G57630.1 28.788 198 121 7 61 255 162 342 4.72e-13 70.1
Msa1333970 AT5G45810.1 35.514 107 63 5 63 167 183 285 6.02e-13 70.1
Msa1333970 AT2G41100.2 32.031 128 68 3 239 347 4 131 6.89e-13 67.4
Msa1333970 AT3G10190.1 30.827 133 85 3 216 343 75 205 7.84e-13 67.4
Msa1333970 AT1G48260.2 31.361 169 85 5 68 210 87 250 9.17e-13 68.9
Msa1333970 AT1G48260.4 31.361 169 85 5 68 210 87 250 9.17e-13 68.9
Msa1333970 AT1G48260.3 31.361 169 85 5 68 210 87 250 9.17e-13 68.9
Msa1333970 AT1G48260.5 31.361 169 85 5 68 210 87 250 9.17e-13 68.9
Msa1333970 AT5G45820.1 33.028 109 67 4 68 174 172 276 1.12e-12 69.3
Msa1333970 AT5G07070.1 38.235 102 57 4 68 167 172 269 1.23e-12 68.9
Msa1333970 AT5G08590.2 34.951 103 63 3 65 163 81 183 1.26e-12 67.8
Msa1333970 AT5G07320.1 28.966 145 96 3 196 339 23 161 1.43e-12 68.9
Msa1333970 AT2G34180.1 35.514 107 63 4 63 167 212 314 1.54e-12 68.9
Msa1333970 AT5G08590.1 34.951 103 63 3 65 163 157 259 1.66e-12 68.2
Msa1333970 AT4G20780.1 27.215 158 89 3 212 345 30 185 3.07e-12 65.1
Msa1333970 AT3G03000.1 31.081 148 93 4 204 345 13 157 3.16e-12 64.7
Msa1333970 AT1G76640.1 31.034 145 92 3 206 344 17 159 3.27e-12 64.3
Msa1333970 AT5G17470.1 28.148 135 89 3 215 343 6 138 5.70e-12 63.5
Msa1333970 AT1G10940.2 33.654 104 65 3 65 164 165 268 7.29e-12 66.2
Msa1333970 AT1G10940.1 33.654 104 65 3 65 164 157 260 8.08e-12 66.2
Msa1333970 AT4G14640.3 34.951 103 64 2 204 304 6 107 1.17e-11 61.6
Msa1333970 AT5G09890.2 36.283 113 65 4 68 176 305 414 1.54e-11 65.9
Msa1333970 AT5G09890.1 36.283 113 65 4 68 176 305 414 1.58e-11 65.9
Msa1333970 AT5G63650.1 33.981 103 64 3 65 163 157 259 1.95e-11 65.1
Msa1333970 AT1G12310.1 28.472 144 99 3 202 343 4 145 1.95e-11 62.0
Msa1333970 AT1G59580.2 34.028 144 64 5 61 174 187 329 2.01e-11 65.1
Msa1333970 AT1G59580.1 34.028 144 64 5 61 174 187 329 2.01e-11 65.1
Msa1333970 AT4G26470.2 25.140 179 110 3 153 312 5 178 2.42e-11 63.2
Msa1333970 AT1G76650.1 29.577 142 95 2 206 344 38 177 2.86e-11 62.0
Msa1333970 AT1G76650.3 29.577 142 95 2 206 344 38 177 2.86e-11 62.0
Msa1333970 AT4G33950.2 33.654 104 65 3 65 164 174 277 3.29e-11 64.3
Msa1333970 AT1G60940.1 31.731 104 67 2 65 164 157 260 3.33e-11 64.3
Msa1333970 AT1G60940.2 31.731 104 67 2 65 164 157 260 3.33e-11 64.3
Msa1333970 AT4G33950.1 33.654 104 65 3 65 164 174 277 4.47e-11 63.9
Msa1333970 AT3G27580.2 31.731 104 64 3 67 165 416 517 5.32e-11 64.3
Msa1333970 AT3G27580.1 31.731 104 64 3 67 165 416 517 5.32e-11 64.3
Msa1333970 AT1G03920.1 35.644 101 60 3 68 164 336 435 8.18e-11 63.5
Msa1333970 AT1G03920.3 35.644 101 60 3 68 164 336 435 8.18e-11 63.5
Msa1333970 AT1G62820.1 27.778 144 100 3 202 343 4 145 8.65e-11 60.1

Find 117 sgRNAs with CRISPR-Local

Find 307 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACAACCTTGCTACGAAAAT+TGG 0.123518 8_4:+54219710 None:intergenic
TTTGTAAGTTTCACCTTATT+TGG 0.139591 8_4:-54219373 Msa1333970:three_prime_UTR
AATAGATTATCAATACATTA+TGG 0.221338 8_4:+54219462 None:intergenic
ATACGTCTTGTTTCCAAATA+AGG 0.230554 8_4:+54219360 None:intergenic
GTAGAAGTGATTCTCTTCTT+TGG 0.233824 8_4:+54222067 None:intergenic
GGGAATATTTAATGCTATAT+TGG 0.238862 8_4:-54222176 Msa1333970:CDS
AAGAAGTGTCTTGCATATTC+TGG 0.250425 8_4:+54219769 None:intergenic
AAAGAAAGGCTCTTGTTAAT+AGG 0.251209 8_4:+54219393 None:intergenic
GACTAGATCTTTGGCACTTT+CGG 0.279414 8_4:+54222111 None:intergenic
TATCTAGAATGAAACAATTC+AGG 0.281671 8_4:-54221637 Msa1333970:CDS
CATCTTCCGGACTAGATCTT+TGG 0.322108 8_4:+54222102 None:intergenic
TTACTTCCTCATACGGGTTA+AGG 0.329243 8_4:+54219505 None:intergenic
TTATCAGAAGAAGAGATTAA+AGG 0.339374 8_4:-54221081 Msa1333970:CDS
GTGATTCTCTTCTTTGGATC+TGG 0.341020 8_4:+54222073 None:intergenic
CAGTGTTATGCTCTTATTTG+TGG 0.351178 8_4:-54219563 Msa1333970:three_prime_UTR
ATCGAGAGACTTAACGTTGT+TGG 0.351564 8_4:-54219808 Msa1333970:three_prime_UTR
CAGGCTGATGTTGATGGAAA+TGG 0.357534 8_4:-54220831 Msa1333970:CDS
GTTCAAGAAACTTGCATTGA+AGG 0.357996 8_4:-54221603 Msa1333970:intron
GATCTGGTGTCAGCATCTTC+CGG 0.364087 8_4:+54222089 None:intergenic
GTTTCTCAGGCTGATGTTGA+TGG 0.365465 8_4:-54220837 Msa1333970:intron
AGGAAAAGTTTACCGTGATA+TGG 0.368012 8_4:-54222435 Msa1333970:CDS
ATATTGTATATTCTGCTTAG+TGG 0.368948 8_4:-54222332 Msa1333970:CDS
GGAAAAGGAAGAAAAGAAAA+GGG 0.370659 8_4:+54219414 None:intergenic
TGCACTATCAATCGGTTTAT+CGG 0.370947 8_4:+54221664 None:intergenic
TATTGTCCTTATCAAAATAC+TGG 0.372678 8_4:+54220727 None:intergenic
ATATGCAAGACACTTCTTCA+TGG 0.378069 8_4:-54219764 Msa1333970:three_prime_UTR
GCATATTACTAGAGAAGAAT+TGG 0.378804 8_4:-54220110 Msa1333970:CDS
AAGACAGGCTTGGCTCGAAT+TGG 0.380610 8_4:-54220994 Msa1333970:CDS
ATTCAGTGGATTTAAAATAA+TGG 0.380620 8_4:+54219869 None:intergenic
TTGGCACTTTCGGATATTGA+TGG 0.388440 8_4:+54222121 None:intergenic
AGGAATTACATGTTGCTTCC+TGG 0.391233 8_4:-54222515 Msa1333970:intron
GAGGTACTTCGTCGTAATTA+TGG 0.392346 8_4:-54222386 Msa1333970:CDS
CAAGGCAATGTTTGCAAACA+TGG 0.398987 8_4:-54221055 Msa1333970:CDS
ATAGATTATCAATACATTAT+GGG 0.400306 8_4:+54219463 None:intergenic
AGGAAAAGGAAGAAAAGAAA+AGG 0.400576 8_4:+54219413 None:intergenic
ACAACCTTGCTACGAAAATT+GGG 0.403439 8_4:+54219711 None:intergenic
GGGTGATGAAGCAACGATAA+AGG 0.405663 8_4:-54220062 Msa1333970:CDS
TTTCTTTGCAGAAACTGAAA+AGG 0.406051 8_4:-54222197 Msa1333970:intron
TTGATCTTACCAGCCCAAAA+AGG 0.410879 8_4:+54222302 None:intergenic
GGCTGAAGTGAAACAGCTTA+TGG 0.411627 8_4:-54220956 Msa1333970:CDS
ATGGATTGGTGAATACTTTG+AGG 0.416185 8_4:-54219745 Msa1333970:three_prime_UTR
GGCTGAGATTATGTATCTTC+AGG 0.419557 8_4:-54219337 Msa1333970:three_prime_UTR
TGACTATCTTGAATTCATAT+CGG 0.419719 8_4:-54220802 Msa1333970:CDS
ACGGGCAGTAAACTCATCTT+TGG 0.421789 8_4:+54223848 None:intergenic
ATGGAAAGGAAATAGACATT+TGG 0.433084 8_4:-54222367 Msa1333970:CDS
CGTTAAGTCTCTCGATCAAT+TGG 0.437925 8_4:+54219815 None:intergenic
GATTATTGTGGTAGTTTCAA+AGG 0.457359 8_4:-54222535 Msa1333970:intron
AGAAGTGTCTTGCATATTCT+GGG 0.459931 8_4:+54219770 None:intergenic
TCTACACCGGCGGGACGAGA+AGG 0.465989 8_4:+54223786 None:intergenic
AGGCTCTTGTTAATAGGAAA+AGG 0.469836 8_4:+54219399 None:intergenic
CAAGACACTTCTTCATGGAT+TGG 0.470691 8_4:-54219759 Msa1333970:three_prime_UTR
TATGCTCTTATTTGTGGTAG+AGG 0.471159 8_4:-54219557 Msa1333970:three_prime_UTR
CTCCACCTTCTCTCATCCAC+GGG 0.480309 8_4:+54221693 None:intergenic
CTACACCGGCGGGACGAGAA+GGG 0.480585 8_4:+54223787 None:intergenic
TGATTTCCTTAACCCGTATG+AGG 0.480616 8_4:-54219511 Msa1333970:three_prime_UTR
AAGGTGAAACTTACAAAGAA+AGG 0.486239 8_4:+54219379 None:intergenic
CTTTCGGATATTGATGGCCA+TGG 0.487626 8_4:+54222127 None:intergenic
TTCTTTGCAGAAACTGAAAA+GGG 0.488753 8_4:-54222196 Msa1333970:intron
TCTCCACCTTCTCTCATCCA+CGG 0.506735 8_4:+54221692 None:intergenic
TTACATCAATGTTCCACCTC+AGG 0.510312 8_4:-54223751 Msa1333970:intron
TAATTACGACGAAGTACCTC+AGG 0.516147 8_4:+54222389 None:intergenic
GATAGAACTGCACTATCAAT+CGG 0.519441 8_4:+54221656 None:intergenic
GGATGGGAGAATAAATTATG+AGG 0.522634 8_4:-54219933 Msa1333970:CDS
ATCTAGAATGAAACAATTCA+GGG 0.522998 8_4:-54221636 Msa1333970:CDS
GAAATAGACATTTGGAGTGC+AGG 0.527784 8_4:-54222359 Msa1333970:CDS
AAATTCAGGCTCAAGACACT+TGG 0.528956 8_4:+54219602 None:intergenic
AGAAGAGATTAAAGGTCTCA+AGG 0.531463 8_4:-54221073 Msa1333970:CDS
ATATTTAATGCTATATTGGA+AGG 0.532580 8_4:-54222172 Msa1333970:CDS
AAAGTGCCAAAGATCTAGTC+CGG 0.532656 8_4:-54222108 Msa1333970:CDS
TACACCGGCGGGACGAGAAG+GGG 0.532694 8_4:+54223788 None:intergenic
GAAAAGGAAGAAAAGAAAAG+GGG 0.533008 8_4:+54219415 None:intergenic
ATCACTTCTACAGAAGTCCT+TGG 0.539145 8_4:-54222055 Msa1333970:intron
AGGCTGATGTTGATGGAAAT+GGG 0.539230 8_4:-54220830 Msa1333970:CDS
GAGAAGTGGAATGCCACACC+AGG 0.542008 8_4:-54219894 Msa1333970:CDS
ACCCATTCCATGCTTTGTCA+TGG 0.542168 8_4:+54220081 None:intergenic
TGAAGAACTGAAGACAGGCT+TGG 0.551989 8_4:-54221004 Msa1333970:CDS
TTATTTGGAAACAAGACGTA+TGG 0.553900 8_4:-54219358 Msa1333970:three_prime_UTR
GCATAGGCACAGACTTGAGC+GGG 0.554226 8_4:-54220772 Msa1333970:CDS
TAAAATAATGGTCCCTGGTG+TGG 0.556346 8_4:+54219881 None:intergenic
TGCCATGACAAAGCATGGAA+TGG 0.558094 8_4:-54220083 Msa1333970:CDS
GCCATGACAAAGCATGGAAT+GGG 0.560994 8_4:-54220082 Msa1333970:CDS
AGGTGATGATCTATGATGAC+GGG 0.562566 8_4:+54223830 None:intergenic
GAGACTGCCATGACAAAGCA+TGG 0.567560 8_4:-54220088 Msa1333970:CDS
TTCTGTGCAATGATGAGAAG+TGG 0.569079 8_4:-54219908 Msa1333970:CDS
ACACCGGCGGGACGAGAAGG+GGG 0.572200 8_4:+54223789 None:intergenic
GGATTTAAAATAATGGTCCC+TGG 0.579689 8_4:+54219876 None:intergenic
TGCTTACTATGTTGCCCCTG+AGG 0.582552 8_4:-54222405 Msa1333970:CDS
GGTAGAGGAAAGAATAATCA+CGG 0.583369 8_4:-54219542 Msa1333970:three_prime_UTR
CACCCGTGGATGAGAGAAGG+TGG 0.586292 8_4:-54221695 Msa1333970:CDS
AAAGGAAATCATTTCTGAGG+TGG 0.586336 8_4:-54220044 Msa1333970:CDS
ACTTATGAAGAACTGAAGAC+AGG 0.591721 8_4:-54221009 Msa1333970:CDS
GATAAAGGAAATCATTTCTG+AGG 0.597584 8_4:-54220047 Msa1333970:CDS
AATTGGATCAAGACTGTCTG+AGG 0.601026 8_4:-54220977 Msa1333970:CDS
ACTTCGTCGTAATTATGGAA+AGG 0.604529 8_4:-54222381 Msa1333970:CDS
TAGATTATCAATACATTATG+GGG 0.607292 8_4:+54219464 None:intergenic
CAGGTGATGATCTATGATGA+CGG 0.609122 8_4:+54223829 None:intergenic
TCATATCGGCTACAATGCAT+AGG 0.609185 8_4:-54220788 Msa1333970:CDS
TAATTACTATCTACACCGGC+GGG 0.612569 8_4:+54223777 None:intergenic
AAAGTTTACCGTGATATGGT+AGG 0.622747 8_4:-54222431 Msa1333970:CDS
GAACACCCGTGGATGAGAGA+AGG 0.623419 8_4:-54221698 Msa1333970:CDS
CACACAATAATGGGTTGTCA+CGG 0.625095 8_4:-54223891 None:intergenic
ATGAAATCGACTCCATTCAG+TGG 0.631210 8_4:+54219855 None:intergenic
AATGGGTTGTCACGGCAGCA+AGG 0.638772 8_4:-54223883 Msa1333970:CDS
ATAATTACTATCTACACCGG+CGG 0.640233 8_4:+54223776 None:intergenic
TCGACTTTGTTAGTGAACCA+TGG 0.641429 8_4:-54222144 Msa1333970:CDS
GTAGAGGAAAGAATAATCAC+GGG 0.643516 8_4:-54219541 Msa1333970:three_prime_UTR
GAAGACTGTTGAACCTGAGG+TGG 0.650345 8_4:+54223738 None:intergenic
ACGATAATTACTATCTACAC+CGG 0.650389 8_4:+54223773 None:intergenic
TGCATAGGCACAGACTTGAG+CGG 0.654593 8_4:-54220773 Msa1333970:CDS
ACTATCAATCGGTTTATCGG+AGG 0.661244 8_4:+54221667 None:intergenic
TTGTTTGGCAAGAACACCCG+TGG 0.663475 8_4:-54221709 Msa1333970:intron
GAGGAAAGAATAATCACGGG+AGG 0.675004 8_4:-54219538 Msa1333970:three_prime_UTR
AATTACGACGAAGTACCTCA+GGG 0.677091 8_4:+54222390 None:intergenic
AAGCACTGCCTACCATATCA+CGG 0.680125 8_4:+54222423 None:intergenic
AACATGGACACTGATAGTAG+TGG 0.718728 8_4:-54221039 Msa1333970:CDS
AGAAGTGGAATGCCACACCA+GGG 0.724546 8_4:-54219893 Msa1333970:CDS
ATTACGACGAAGTACCTCAG+GGG 0.803244 8_4:+54222391 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAATTAAATAAATAAAAA+TGG + chr8_4:54221220-54221239 None:intergenic 0.0%
!!! TTTTTTTTTTTTTTATATAT+GGG + chr8_4:54222498-54222517 None:intergenic 0.0%
!!! TTTTTTTTTTTTTTTATATA+TGG + chr8_4:54222499-54222518 None:intergenic 0.0%
!!! TGTGATATATTTATAGTTTT+TGG - chr8_4:54220903-54220922 Msa1333970:intron 15.0%
!!! TTGAAAAATTAACACTTTTA+TGG - chr8_4:54220938-54220957 Msa1333970:intron 15.0%
!!! ATAAAGTGAAGTTTTTATTA+TGG + chr8_4:54222895-54222914 None:intergenic 15.0%
!! TGTTAAAATTGTAAGATTTA+TGG - chr8_4:54222997-54223016 Msa1333970:intron 15.0%
!! ATAGATTATCAATACATTAT+GGG + chr8_4:54223708-54223727 None:intergenic 15.0%
!! AATAGATTATCAATACATTA+TGG + chr8_4:54223709-54223728 None:intergenic 15.0%
!! AACTTCTTTATATCTTCATA+GGG + chr8_4:54219550-54219569 None:intergenic 20.0%
!! AAACTTCTTTATATCTTCAT+AGG + chr8_4:54219551-54219570 None:intergenic 20.0%
!! AAAAATAAGTAATCCCAAAT+TGG + chr8_4:54219603-54219622 None:intergenic 20.0%
!!! TTAGTTTGATTGATATCTAA+TGG - chr8_4:54220217-54220236 Msa1333970:intron 20.0%
!! AAATAGTAAATCAGATAAGT+TGG - chr8_4:54220518-54220537 Msa1333970:intron 20.0%
!!! AAAAATTAACACTTTTATGG+TGG - chr8_4:54220941-54220960 Msa1333970:intron 20.0%
!!! AAAATTAACACTTTTATGGT+GGG - chr8_4:54220942-54220961 Msa1333970:intron 20.0%
!! ATATTTAATGCTATATTGGA+AGG - chr8_4:54220996-54221015 Msa1333970:CDS 20.0%
!! TAGTATGTATTACAATACTT+GGG + chr8_4:54221340-54221359 None:intergenic 20.0%
!! ATAGTATGTATTACAATACT+TGG + chr8_4:54221341-54221360 None:intergenic 20.0%
!!! ACTATGATTAATGATTTGTT+TGG - chr8_4:54221444-54221463 Msa1333970:intron 20.0%
!!! ATATTGAACTCTAAAGTTTA+TGG - chr8_4:54221900-54221919 Msa1333970:intron 20.0%
!!! AGAGTTTTCTTGATTAATTT+AGG + chr8_4:54223171-54223190 None:intergenic 20.0%
!!! ATTCAGTGGATTTAAAATAA+TGG + chr8_4:54223302-54223321 None:intergenic 20.0%
!!! ATTATTTTAAATCCACTGAA+TGG - chr8_4:54223301-54223320 Msa1333970:intron 20.0%
!!! TCTTTATACATTTTAGTTTC+AGG - chr8_4:54223531-54223550 Msa1333970:intron 20.0%
!! AGCATTTAACATAAAAATTC+AGG + chr8_4:54223583-54223602 None:intergenic 20.0%
!! GAAGTAAAAACTCAAATATA+TGG - chr8_4:54223679-54223698 Msa1333970:intron 20.0%
!! TAGATTATCAATACATTATG+GGG + chr8_4:54223707-54223726 None:intergenic 20.0%
!! ATAAAGAAGTTTTACACTCT+AGG - chr8_4:54219559-54219578 Msa1333970:three_prime_UTR 25.0%
! CGTGTAAATCTATATTAAAG+AGG - chr8_4:54219653-54219672 Msa1333970:three_prime_UTR 25.0%
! CCTTTAAACTCAACAATATT+CGG + chr8_4:54219751-54219770 None:intergenic 25.0%
! CACATAATTTAAACATTAGC+AGG + chr8_4:54220099-54220118 None:intergenic 25.0%
! GGTTATTATATTTGCTTGTT+AGG - chr8_4:54220155-54220174 Msa1333970:intron 25.0%
! ACGAAAATACAATCTTTGTT+AGG + chr8_4:54220486-54220505 None:intergenic 25.0%
!! ACAAAGATTGTATTTTCGTT+TGG - chr8_4:54220487-54220506 Msa1333970:intron 25.0%
!! GTGTTACTGTAATTTATTTC+AGG - chr8_4:54220713-54220732 Msa1333970:intron 25.0%
! ATATTGTATATTCTGCTTAG+TGG - chr8_4:54220836-54220855 Msa1333970:intron 25.0%
!! AAATTAACACTTTTATGGTG+GGG - chr8_4:54220943-54220962 Msa1333970:intron 25.0%
! GGGAATATTTAATGCTATAT+TGG - chr8_4:54220992-54221011 Msa1333970:CDS 25.0%
!! TAGTTCTTCTTTTAATCAAG+TGG - chr8_4:54221189-54221208 Msa1333970:intron 25.0%
!! CATTTGAAACAAAAAGTCAA+AGG + chr8_4:54221281-54221300 None:intergenic 25.0%
! ACAAATCATTAATCATAGTC+AGG + chr8_4:54221443-54221462 None:intergenic 25.0%
!! TATCTAGAATGAAACAATTC+AGG - chr8_4:54221531-54221550 Msa1333970:intron 25.0%
!! ATCTAGAATGAAACAATTCA+GGG - chr8_4:54221532-54221551 Msa1333970:intron 25.0%
! ACCAACACAAATGAATTTAT+TGG + chr8_4:54221789-54221808 None:intergenic 25.0%
!! GTTTCTTGTAAAGTTTTCTT+TGG - chr8_4:54221807-54221826 Msa1333970:intron 25.0%
! TTGACATAAAACAGAAAAAC+TGG - chr8_4:54221876-54221895 Msa1333970:intron 25.0%
! ATTCTATGAGTTTCATATTC+TGG - chr8_4:54221998-54222017 Msa1333970:intron 25.0%
!! GATATTTTTCTCCATTAACT+TGG - chr8_4:54222034-54222053 Msa1333970:intron 25.0%
! TTATCAGAAGAAGAGATTAA+AGG - chr8_4:54222087-54222106 Msa1333970:CDS 25.0%
! TGACTATCTTGAATTCATAT+CGG - chr8_4:54222366-54222385 Msa1333970:CDS 25.0%
! TATTGTCCTTATCAAAATAC+TGG + chr8_4:54222444-54222463 None:intergenic 25.0%
!!! TATTTTGATAAGGACAATAG+TGG - chr8_4:54222445-54222464 Msa1333970:intron 25.0%
!!! ATTTTGATAAGGACAATAGT+GGG - chr8_4:54222446-54222465 Msa1333970:intron 25.0%
! TTTAATCTCTAAGTCAATGT+TGG - chr8_4:54222685-54222704 Msa1333970:intron 25.0%
! GGGTTAGGAAAAAATAAATA+AGG + chr8_4:54222801-54222820 None:intergenic 25.0%
!! AAGTGAAGTTTTTATTATGG+TGG + chr8_4:54222892-54222911 None:intergenic 25.0%
! CTAATGATTCTTAAACAAAC+AGG - chr8_4:54223214-54223233 Msa1333970:intron 25.0%
! TTTGTAAGTTTCACCTTATT+TGG - chr8_4:54223795-54223814 Msa1333970:CDS 25.0%
ACGATAATTACTATCTACAC+CGG + chr8_4:54219398-54219417 None:intergenic 30.0%
TTACACTCTAGGTAAAGAAT+TGG - chr8_4:54219570-54219589 Msa1333970:three_prime_UTR 30.0%
TACACTCTAGGTAAAGAATT+GGG - chr8_4:54219571-54219590 Msa1333970:three_prime_UTR 30.0%
! TTTTGTACTGAGAATTCAAC+CGG - chr8_4:54219619-54219638 Msa1333970:three_prime_UTR 30.0%
TTTACACGCGTAATTTAAAC+CGG + chr8_4:54219641-54219660 None:intergenic 30.0%
CCGAATATTGTTGAGTTTAA+AGG - chr8_4:54219748-54219767 Msa1333970:three_prime_UTR 30.0%
TTTGATAGGATTATTGCTCA+AGG - chr8_4:54219832-54219851 Msa1333970:three_prime_UTR 30.0%
!!! TGTGCACATTTGTCATTTTA+TGG - chr8_4:54219906-54219925 Msa1333970:CDS 30.0%
!!! GTGCACATTTGTCATTTTAT+GGG - chr8_4:54219907-54219926 Msa1333970:CDS 30.0%
! GAATTTCTTGCTTTCTAGTA+AGG - chr8_4:54219957-54219976 Msa1333970:intron 30.0%
CTTTCTGTCTTTATTGAAGA+AGG - chr8_4:54220015-54220034 Msa1333970:intron 30.0%
CTCTCAAAACTATCTATGTT+TGG - chr8_4:54220134-54220153 Msa1333970:intron 30.0%
! GAGTTTGAGTTATAACTCAT+TGG - chr8_4:54220269-54220288 Msa1333970:intron 30.0%
TAAAGATCAAGTTAGACTTG+AGG + chr8_4:54220332-54220351 None:intergenic 30.0%
AACTTGATCTTTAACATGAG+TGG - chr8_4:54220339-54220358 Msa1333970:intron 30.0%
TCAATCTTACAACAACAAGT+TGG + chr8_4:54220411-54220430 None:intergenic 30.0%
! CAAGTATCATATCTTTTCGA+TGG + chr8_4:54220459-54220478 None:intergenic 30.0%
GTTTCTATTCCATATTCAGT+AGG - chr8_4:54220540-54220559 Msa1333970:intron 30.0%
CTGATTGTGTTTGATTATTG+TGG - chr8_4:54220621-54220640 Msa1333970:intron 30.0%
GATTATTGTGGTAGTTTCAA+AGG - chr8_4:54220633-54220652 Msa1333970:intron 30.0%
ATGGAAAGGAAATAGACATT+TGG - chr8_4:54220801-54220820 Msa1333970:CDS 30.0%
TTTCTTTGCAGAAACTGAAA+AGG - chr8_4:54220971-54220990 Msa1333970:CDS 30.0%
TTCTTTGCAGAAACTGAAAA+GGG - chr8_4:54220972-54220991 Msa1333970:CDS 30.0%
TTTAGATGCTAAACTGATAC+TGG + chr8_4:54221251-54221270 None:intergenic 30.0%
TGAAACAAAAAGTCAAAGGA+GGG + chr8_4:54221277-54221296 None:intergenic 30.0%
TTGAAACAAAAAGTCAAAGG+AGG + chr8_4:54221278-54221297 None:intergenic 30.0%
GAAAATGCAAATCAATGATG+AGG + chr8_4:54221388-54221407 None:intergenic 30.0%
! TCTAACTTTTCTATCACACA+TGG - chr8_4:54221417-54221436 Msa1333970:intron 30.0%
!! TGTTTTGTGTCCTTTTTTGT+CGG - chr8_4:54221619-54221638 Msa1333970:CDS 30.0%
TGTCTGTAGAAATGGTATTA+TGG - chr8_4:54221646-54221665 Msa1333970:CDS 30.0%
GCATTTATACAGCTTAATAG+TGG + chr8_4:54221767-54221786 None:intergenic 30.0%
GCCAATAAATTCATTTGTGT+TGG - chr8_4:54221785-54221804 Msa1333970:intron 30.0%
ATGAAACTCATAGAATGTTC+AGG + chr8_4:54221994-54222013 None:intergenic 30.0%
!!! ATATTCTGGCTTATCTTTTC+TGG - chr8_4:54222012-54222031 Msa1333970:intron 30.0%
!! ATTTTTCTCCATTAACTTGG+TGG - chr8_4:54222037-54222056 Msa1333970:intron 30.0%
AGAAATTTCCACCAAGTTAA+TGG + chr8_4:54222048-54222067 None:intergenic 30.0%
CACAGTTTCTGTTAAGTTTA+GGG + chr8_4:54222297-54222316 None:intergenic 30.0%
ACACAGTTTCTGTTAAGTTT+AGG + chr8_4:54222298-54222317 None:intergenic 30.0%
TCTTATGTATAACGTTTCTC+AGG - chr8_4:54222318-54222337 Msa1333970:CDS 30.0%
!!! AGCATTCCAGTATTTTGATA+AGG - chr8_4:54222435-54222454 Msa1333970:CDS 30.0%
CGTTCAAACACAAAATGATT+TGG + chr8_4:54222527-54222546 None:intergenic 30.0%
GCATATTACTAGAGAAGAAT+TGG - chr8_4:54223058-54223077 Msa1333970:intron 30.0%
GATAAAGGAAATCATTTCTG+AGG - chr8_4:54223121-54223140 Msa1333970:intron 30.0%
TGATTCTTAAACAAACAGGA+TGG - chr8_4:54223218-54223237 Msa1333970:intron 30.0%
GATTCTTAAACAAACAGGAT+GGG - chr8_4:54223219-54223238 Msa1333970:intron 30.0%
! TGAGTTTTTACTTCCTCATA+CGG + chr8_4:54223673-54223692 None:intergenic 30.0%
GAAAAGGAAGAAAAGAAAAG+GGG + chr8_4:54223756-54223775 None:intergenic 30.0%
GGAAAAGGAAGAAAAGAAAA+GGG + chr8_4:54223757-54223776 None:intergenic 30.0%
AGGAAAAGGAAGAAAAGAAA+AGG + chr8_4:54223758-54223777 None:intergenic 30.0%
AAAGAAAGGCTCTTGTTAAT+AGG + chr8_4:54223778-54223797 None:intergenic 30.0%
AAGGTGAAACTTACAAAGAA+AGG + chr8_4:54223792-54223811 None:intergenic 30.0%
!! ATACGTCTTGTTTCCAAATA+AGG + chr8_4:54223811-54223830 None:intergenic 30.0%
TTATTTGGAAACAAGACGTA+TGG - chr8_4:54223810-54223829 Msa1333970:CDS 30.0%
ATAATTACTATCTACACCGG+CGG + chr8_4:54219395-54219414 None:intergenic 35.0%
!! AAGGTTGATACAACCATCTT+AGG - chr8_4:54219520-54219539 Msa1333970:three_prime_UTR 35.0%
TTCATAGGGTTTACCTAAGA+TGG + chr8_4:54219536-54219555 None:intergenic 35.0%
!! TGAGTTTAAAGGTGCTTATG+AGG - chr8_4:54219759-54219778 Msa1333970:three_prime_UTR 35.0%
CTAGAAAGCAAGAAATTCTC+AGG + chr8_4:54219955-54219974 None:intergenic 35.0%
! TTGCTTTCTAGTAAGGATGA+TGG - chr8_4:54219964-54219983 Msa1333970:intron 35.0%
! TGCTTTCTAGTAAGGATGAT+GGG - chr8_4:54219965-54219984 Msa1333970:intron 35.0%
TAACTCATTGGCACATTGTT+AGG - chr8_4:54220281-54220300 Msa1333970:intron 35.0%
! AGGATAGCATTCTGAAAACT+TGG + chr8_4:54220312-54220331 None:intergenic 35.0%
GATCTTTAACATGAGTGGAT+AGG - chr8_4:54220344-54220363 Msa1333970:intron 35.0%
TCAATTCGACCTACTGAATA+TGG + chr8_4:54220552-54220571 None:intergenic 35.0%
ATTATCGACCATGAAAGCAA+AGG + chr8_4:54220684-54220703 None:intergenic 35.0%
AGGAAAAGTTTACCGTGATA+TGG - chr8_4:54220733-54220752 Msa1333970:CDS 35.0%
AAAGTTTACCGTGATATGGT+AGG - chr8_4:54220737-54220756 Msa1333970:CDS 35.0%
ACTTCGTCGTAATTATGGAA+AGG - chr8_4:54220787-54220806 Msa1333970:CDS 35.0%
GTAGAAGTGATTCTCTTCTT+TGG + chr8_4:54221104-54221123 None:intergenic 35.0%
!! CTAGACTACTGGTTCTATTA+TGG - chr8_4:54221138-54221157 Msa1333970:intron 35.0%
! TGCACTATCAATCGGTTTAT+CGG + chr8_4:54221507-54221526 None:intergenic 35.0%
GATAGAACTGCACTATCAAT+CGG + chr8_4:54221515-54221534 None:intergenic 35.0%
GTTCAAGAAACTTGCATTGA+AGG - chr8_4:54221565-54221584 Msa1333970:intron 35.0%
TCTGAATGTGTTAACCTTCA+GGG + chr8_4:54221843-54221862 None:intergenic 35.0%
!! TATGGAAACTGCTGTCATTT+TGG - chr8_4:54221918-54221937 Msa1333970:intron 35.0%
!!! TGTCATTTTGGAAGCTTAGA+TGG - chr8_4:54221930-54221949 Msa1333970:intron 35.0%
! AACTTGGTGGAAATTTCTCT+AGG - chr8_4:54222050-54222069 Msa1333970:intron 35.0%
GTGGAAATTTCTCTAGGTTA+TGG - chr8_4:54222056-54222075 Msa1333970:CDS 35.0%
AGAAGAGATTAAAGGTCTCA+AGG - chr8_4:54222095-54222114 Msa1333970:CDS 35.0%
ACTTATGAAGAACTGAAGAC+AGG - chr8_4:54222159-54222178 Msa1333970:CDS 35.0%
GCATTCAACTAGTTATGCTT+TGG + chr8_4:54222264-54222283 None:intergenic 35.0%
AACTCATCTACAATAATGGC+AGG + chr8_4:54222610-54222629 None:intergenic 35.0%
GACGAACTCATCTACAATAA+TGG + chr8_4:54222614-54222633 None:intergenic 35.0%
TCAAGTTTAGTCGAATGTGA+TGG + chr8_4:54222717-54222736 None:intergenic 35.0%
! CTAAACTTGACAGGACATTT+TGG - chr8_4:54222727-54222746 Msa1333970:intron 35.0%
CAATGTGCATGACATAGATA+AGG + chr8_4:54222761-54222780 None:intergenic 35.0%
TATGTCATGCACATTGATAC+TGG - chr8_4:54222765-54222784 Msa1333970:intron 35.0%
CTTTATGAATTCCTAACCTC+TGG - chr8_4:54222909-54222928 Msa1333970:intron 35.0%
TAAATATTCCTAAGTGCCAG+AGG + chr8_4:54222928-54222947 None:intergenic 35.0%
CATTTGCTTCTGTAAATTCC+CGG - chr8_4:54223031-54223050 Msa1333970:intron 35.0%
! AAAGGAAATCATTTCTGAGG+TGG - chr8_4:54223124-54223143 Msa1333970:intron 35.0%
GGATGGGAGAATAAATTATG+AGG - chr8_4:54223235-54223254 Msa1333970:intron 35.0%
! GGATTTAAAATAATGGTCCC+TGG + chr8_4:54223295-54223314 None:intergenic 35.0%
!! AGAAGTGTCTTGCATATTCT+GGG + chr8_4:54223401-54223420 None:intergenic 35.0%
!! AAGAAGTGTCTTGCATATTC+TGG + chr8_4:54223402-54223421 None:intergenic 35.0%
ATATGCAAGACACTTCTTCA+TGG - chr8_4:54223404-54223423 Msa1333970:intron 35.0%
!! ATGGATTGGTGAATACTTTG+AGG - chr8_4:54223423-54223442 Msa1333970:intron 35.0%
ACAACCTTGCTACGAAAATT+GGG + chr8_4:54223460-54223479 None:intergenic 35.0%
AACAACCTTGCTACGAAAAT+TGG + chr8_4:54223461-54223480 None:intergenic 35.0%
!!! TATTTTTAGTACCACACGCA+CGG + chr8_4:54223485-54223504 None:intergenic 35.0%
! CAGTGTTATGCTCTTATTTG+TGG - chr8_4:54223605-54223624 Msa1333970:intron 35.0%
! TATGCTCTTATTTGTGGTAG+AGG - chr8_4:54223611-54223630 Msa1333970:intron 35.0%
GGTAGAGGAAAGAATAATCA+CGG - chr8_4:54223626-54223645 Msa1333970:intron 35.0%
GTAGAGGAAAGAATAATCAC+GGG - chr8_4:54223627-54223646 Msa1333970:intron 35.0%
! GAGTTTTTACTTCCTCATAC+GGG + chr8_4:54223672-54223691 None:intergenic 35.0%
AGGCTCTTGTTAATAGGAAA+AGG + chr8_4:54223772-54223791 None:intergenic 35.0%
AGGTGATGATCTATGATGAC+GGG + chr8_4:54219341-54219360 None:intergenic 40.0%
CAGGTGATGATCTATGATGA+CGG + chr8_4:54219342-54219361 None:intergenic 40.0%
TAATTACTATCTACACCGGC+GGG + chr8_4:54219394-54219413 None:intergenic 40.0%
TTACATCAATGTTCCACCTC+AGG - chr8_4:54219417-54219436 Msa1333970:three_prime_UTR 40.0%
!!! AGGGTTTTGGATTTGAGGAT+GGG + chr8_4:54219468-54219487 None:intergenic 40.0%
ATTCTCTGTGCATCTTGTGA+TGG - chr8_4:54219786-54219805 Msa1333970:three_prime_UTR 40.0%
! AGCTGCTGCTTCTATTTGTA+GGG - chr8_4:54219870-54219889 Msa1333970:exon 40.0%
! GCTTTCTAGTAAGGATGATG+GGG - chr8_4:54219966-54219985 Msa1333970:intron 40.0%
!!! GCACTTAAGGCTACTGATTT+TGG - chr8_4:54219991-54220010 Msa1333970:intron 40.0%
ACTCAATGTCACCATCCTAA+GGG + chr8_4:54220253-54220272 None:intergenic 40.0%
AACTCAATGTCACCATCCTA+AGG + chr8_4:54220254-54220273 None:intergenic 40.0%
! AGGAATTACATGTTGCTTCC+TGG - chr8_4:54220653-54220672 Msa1333970:intron 40.0%
ATGAAAGCAAAGGAGATACC+AGG + chr8_4:54220674-54220693 None:intergenic 40.0%
TGGTATCTCCTTTGCTTTCA+TGG - chr8_4:54220673-54220692 Msa1333970:intron 40.0%
! AATTACGACGAAGTACCTCA+GGG + chr8_4:54220781-54220800 None:intergenic 40.0%
! TAATTACGACGAAGTACCTC+AGG + chr8_4:54220782-54220801 None:intergenic 40.0%
! GAGGTACTTCGTCGTAATTA+TGG - chr8_4:54220782-54220801 Msa1333970:CDS 40.0%
! GAAATAGACATTTGGAGTGC+AGG - chr8_4:54220809-54220828 Msa1333970:CDS 40.0%
! TTAGTGGTGTACCACCTTTT+TGG - chr8_4:54220852-54220871 Msa1333970:intron 40.0%
! TAGTGGTGTACCACCTTTTT+GGG - chr8_4:54220853-54220872 Msa1333970:intron 40.0%
TTGATCTTACCAGCCCAAAA+AGG + chr8_4:54220869-54220888 None:intergenic 40.0%
TCGACTTTGTTAGTGAACCA+TGG - chr8_4:54221024-54221043 Msa1333970:CDS 40.0%
TTGGCACTTTCGGATATTGA+TGG + chr8_4:54221050-54221069 None:intergenic 40.0%
GACTAGATCTTTGGCACTTT+CGG + chr8_4:54221060-54221079 None:intergenic 40.0%
! AAAGTGCCAAAGATCTAGTC+CGG - chr8_4:54221060-54221079 Msa1333970:CDS 40.0%
GTGATTCTCTTCTTTGGATC+TGG + chr8_4:54221098-54221117 None:intergenic 40.0%
ATCACTTCTACAGAAGTCCT+TGG - chr8_4:54221113-54221132 Msa1333970:intron 40.0%
TACAATACTTGGGATAGCAG+AGG + chr8_4:54221330-54221349 None:intergenic 40.0%
! ACTATCAATCGGTTTATCGG+AGG + chr8_4:54221504-54221523 None:intergenic 40.0%
CAGACAATGACCGACAAAAA+AGG + chr8_4:54221632-54221651 None:intergenic 40.0%
TCGGTCATTGTCTGTAGAAA+TGG - chr8_4:54221638-54221657 Msa1333970:CDS 40.0%
TTGGTAAAAACATGCCCTGA+AGG - chr8_4:54221826-54221845 Msa1333970:intron 40.0%
GTCTGAATGTGTTAACCTTC+AGG + chr8_4:54221844-54221863 None:intergenic 40.0%
CAAGGCAATGTTTGCAAACA+TGG - chr8_4:54222113-54222132 Msa1333970:CDS 40.0%
AACATGGACACTGATAGTAG+TGG - chr8_4:54222129-54222148 Msa1333970:CDS 40.0%
AATTGGATCAAGACTGTCTG+AGG - chr8_4:54222191-54222210 Msa1333970:intron 40.0%
! AGGCTGATGTTGATGGAAAT+GGG - chr8_4:54222338-54222357 Msa1333970:CDS 40.0%
! TCATATCGGCTACAATGCAT+AGG - chr8_4:54222380-54222399 Msa1333970:CDS 40.0%
CACATTCGACTAAACTTGAC+AGG - chr8_4:54222718-54222737 Msa1333970:intron 40.0%
! TTTTCCTAACCCCTTCACTA+TGG - chr8_4:54222809-54222828 Msa1333970:intron 40.0%
TTTCCTAACCCCTTCACTAT+GGG - chr8_4:54222810-54222829 Msa1333970:intron 40.0%
ATATACTCCCCATAGTGAAG+GGG + chr8_4:54222821-54222840 None:intergenic 40.0%
CATATACTCCCCATAGTGAA+GGG + chr8_4:54222822-54222841 None:intergenic 40.0%
TCATATACTCCCCATAGTGA+AGG + chr8_4:54222823-54222842 None:intergenic 40.0%
CGGGAATTTACAGAAGCAAA+TGG + chr8_4:54223033-54223052 None:intergenic 40.0%
TCTCTAGTAATATGCCTGTC+CGG + chr8_4:54223053-54223072 None:intergenic 40.0%
TTCTGTGCAATGATGAGAAG+TGG - chr8_4:54223260-54223279 Msa1333970:intron 40.0%
TAAAATAATGGTCCCTGGTG+TGG + chr8_4:54223290-54223309 None:intergenic 40.0%
! ATGAAATCGACTCCATTCAG+TGG + chr8_4:54223316-54223335 None:intergenic 40.0%
CGTTAAGTCTCTCGATCAAT+TGG + chr8_4:54223356-54223375 None:intergenic 40.0%
ATCGAGAGACTTAACGTTGT+TGG - chr8_4:54223360-54223379 Msa1333970:intron 40.0%
CAAGACACTTCTTCATGGAT+TGG - chr8_4:54223409-54223428 Msa1333970:intron 40.0%
! CAATCCCAATTTTCGTAGCA+AGG - chr8_4:54223453-54223472 Msa1333970:intron 40.0%
AAATTCAGGCTCAAGACACT+TGG + chr8_4:54223569-54223588 None:intergenic 40.0%
TGATTTCCTTAACCCGTATG+AGG - chr8_4:54223657-54223676 Msa1333970:intron 40.0%
! TTACTTCCTCATACGGGTTA+AGG + chr8_4:54223666-54223685 None:intergenic 40.0%
GGCTGAGATTATGTATCTTC+AGG - chr8_4:54223831-54223850 Msa1333970:CDS 40.0%
ACGGGCAGTAAACTCATCTT+TGG + chr8_4:54219323-54219342 None:intergenic 45.0%
GTTGAAGACTGTTGAACCTG+AGG + chr8_4:54219436-54219455 None:intergenic 45.0%
!!! GGGTTTTGGATTTGAGGATG+GGG + chr8_4:54219467-54219486 None:intergenic 45.0%
!!! GAGGGTTTTGGATTTGAGGA+TGG + chr8_4:54219469-54219488 None:intergenic 45.0%
CTAGGTAAAGAATTGGGTCG+AGG - chr8_4:54219577-54219596 Msa1333970:three_prime_UTR 45.0%
AATTGGGTCGAGGCCAATTT+GGG - chr8_4:54219587-54219606 Msa1333970:three_prime_UTR 45.0%
GAGGAAGCTTGTGTCTAAAG+CGG - chr8_4:54219672-54219691 Msa1333970:three_prime_UTR 45.0%
CAGATTCTGCAGCATTTGTC+TGG - chr8_4:54219721-54219740 Msa1333970:three_prime_UTR 45.0%
! CTTGTGATGGAACTTTGTGC+TGG - chr8_4:54219799-54219818 Msa1333970:three_prime_UTR 45.0%
! CTGGTGGTGAGTTGTTTGAT+AGG - chr8_4:54219818-54219837 Msa1333970:three_prime_UTR 45.0%
! GAGCTGCTGCTTCTATTTGT+AGG - chr8_4:54219869-54219888 Msa1333970:exon 45.0%
AATGGTGAACCTGAACCCTT+AGG - chr8_4:54220235-54220254 Msa1333970:intron 45.0%
CATTGGCACATTGTTAGGCT+AGG - chr8_4:54220286-54220305 Msa1333970:intron 45.0%
! AAGCACTGCCTACCATATCA+CGG + chr8_4:54220748-54220767 None:intergenic 45.0%
! ATTACGACGAAGTACCTCAG+GGG + chr8_4:54220780-54220799 None:intergenic 45.0%
ATCTTACCAGCCCAAAAAGG+TGG + chr8_4:54220866-54220885 None:intergenic 45.0%
! CTTTCGGATATTGATGGCCA+TGG + chr8_4:54221044-54221063 None:intergenic 45.0%
! CATCTTCCGGACTAGATCTT+TGG + chr8_4:54221069-54221088 None:intergenic 45.0%
AGTCCTTGGTACTAGACTAC+TGG - chr8_4:54221127-54221146 Msa1333970:intron 45.0%
GAACCAGTAGTCTAGTACCA+AGG + chr8_4:54221133-54221152 None:intergenic 45.0%
GAGTTGAGTGAAAGCAAACG+AGG + chr8_4:54221705-54221724 None:intergenic 45.0%
! ACTAGGTGGGTTTAGCTACA+TGG - chr8_4:54221733-54221752 Msa1333970:intron 45.0%
TGAAGAACTGAAGACAGGCT+TGG - chr8_4:54222164-54222183 Msa1333970:CDS 45.0%
GGCTGAAGTGAAACAGCTTA+TGG - chr8_4:54222212-54222231 Msa1333970:intron 45.0%
GTTTCTCAGGCTGATGTTGA+TGG - chr8_4:54222331-54222350 Msa1333970:CDS 45.0%
! CAGGCTGATGTTGATGGAAA+TGG - chr8_4:54222337-54222356 Msa1333970:CDS 45.0%
!! ACATTGATACTGGCTCACTC+TGG - chr8_4:54222775-54222794 Msa1333970:intron 45.0%
TTCCTAACCCCTTCACTATG+GGG - chr8_4:54222811-54222830 Msa1333970:intron 45.0%
ATTCCTAACCTCTGGCACTT+AGG - chr8_4:54222917-54222936 Msa1333970:intron 45.0%
ATTCCTAAGTGCCAGAGGTT+AGG + chr8_4:54222923-54222942 None:intergenic 45.0%
CTCTAGTAATATGCCTGTCC+GGG + chr8_4:54223052-54223071 None:intergenic 45.0%
TGCCATGACAAAGCATGGAA+TGG - chr8_4:54223085-54223104 Msa1333970:intron 45.0%
GCCATGACAAAGCATGGAAT+GGG - chr8_4:54223086-54223105 Msa1333970:intron 45.0%
ACCCATTCCATGCTTTGTCA+TGG + chr8_4:54223090-54223109 None:intergenic 45.0%
GGGTGATGAAGCAACGATAA+AGG - chr8_4:54223106-54223125 Msa1333970:intron 45.0%
GAGGAAAGAATAATCACGGG+AGG - chr8_4:54223630-54223649 Msa1333970:intron 45.0%
GAAGACTGTTGAACCTGAGG+TGG + chr8_4:54219433-54219452 None:intergenic 50.0%
!!! GGCAGAGGGTTTTGGATTTG+AGG + chr8_4:54219473-54219492 None:intergenic 50.0%
!! CTTCTGCTGCACTGGTTTCT+GGG + chr8_4:54219503-54219522 None:intergenic 50.0%
GTATCAACCTTCTGCTGCAC+TGG + chr8_4:54219511-54219530 None:intergenic 50.0%
GAATTGGGTCGAGGCCAATT+TGG - chr8_4:54219586-54219605 Msa1333970:three_prime_UTR 50.0%
! GTGATGGAACTTTGTGCTGG+TGG - chr8_4:54219802-54219821 Msa1333970:three_prime_UTR 50.0%
GTGAACCTGAACCCTTAGGA+TGG - chr8_4:54220239-54220258 Msa1333970:intron 50.0%
TGTCACCATCCTAAGGGTTC+AGG + chr8_4:54220247-54220266 None:intergenic 50.0%
GGCTCGTGATGATTAGAGTG+TGG + chr8_4:54220390-54220409 None:intergenic 50.0%
TGCTTACTATGTTGCCCCTG+AGG - chr8_4:54220763-54220782 Msa1333970:CDS 50.0%
! GATCTGGTGTCAGCATCTTC+CGG + chr8_4:54221082-54221101 None:intergenic 50.0%
TTGTTTGGCAAGAACACCCG+TGG - chr8_4:54221459-54221478 Msa1333970:intron 50.0%
TCTCCACCTTCTCTCATCCA+CGG + chr8_4:54221479-54221498 None:intergenic 50.0%
ACTCAACTCGCCATCTCACT+AGG - chr8_4:54221716-54221735 Msa1333970:intron 50.0%
AACTCGCCATCTCACTAGGT+GGG - chr8_4:54221720-54221739 Msa1333970:intron 50.0%
GCTAAACCCACCTAGTGAGA+TGG + chr8_4:54221729-54221748 None:intergenic 50.0%
! AAGACAGGCTTGGCTCGAAT+TGG - chr8_4:54222174-54222193 Msa1333970:CDS 50.0%
TGCATAGGCACAGACTTGAG+CGG - chr8_4:54222395-54222414 Msa1333970:CDS 50.0%
!!! GACAGGACATTTTGGCTCGA+TGG - chr8_4:54222735-54222754 Msa1333970:intron 50.0%
GCTTCTGTAAATTCCCGGAC+AGG - chr8_4:54223036-54223055 Msa1333970:intron 50.0%
GAGACTGCCATGACAAAGCA+TGG - chr8_4:54223080-54223099 Msa1333970:intron 50.0%
AGAAGTGGAATGCCACACCA+GGG - chr8_4:54223275-54223294 Msa1333970:intron 50.0%
!! CCTTCTGCTGCACTGGTTTC+TGG + chr8_4:54219504-54219523 None:intergenic 55.0%
CCAGAAACCAGTGCAGCAGA+AGG - chr8_4:54219501-54219520 Msa1333970:three_prime_UTR 55.0%
!! GGATGATGGGGCAGCACTTA+AGG - chr8_4:54219978-54219997 Msa1333970:intron 55.0%
!! GGTGTACCACCTTTTTGGGC+TGG - chr8_4:54220857-54220876 Msa1333970:intron 55.0%
GAACACCCGTGGATGAGAGA+AGG - chr8_4:54221470-54221489 Msa1333970:intron 55.0%
CTCCACCTTCTCTCATCCAC+GGG + chr8_4:54221478-54221497 None:intergenic 55.0%
CAACTCGCCATCTCACTAGG+TGG - chr8_4:54221719-54221738 Msa1333970:intron 55.0%
GCATAGGCACAGACTTGAGC+GGG - chr8_4:54222396-54222415 Msa1333970:CDS 55.0%
CTCCCCATAGTGAAGGGGTT+AGG + chr8_4:54222816-54222835 None:intergenic 55.0%
GAGAAGTGGAATGCCACACC+AGG - chr8_4:54223274-54223293 Msa1333970:intron 55.0%
! CAAGGTTGTTTCCGTGCGTG+TGG - chr8_4:54223471-54223490 Msa1333970:intron 55.0%
! GCAGTGGTGGCAGAGGGTTT+TGG + chr8_4:54219481-54219500 None:intergenic 60.0%
TTCTGGGCAGTGGTGGCAGA+GGG + chr8_4:54219487-54219506 None:intergenic 60.0%
TTTCTGGGCAGTGGTGGCAG+AGG + chr8_4:54219488-54219507 None:intergenic 60.0%
!! CACTGGTTTCTGGGCAGTGG+TGG + chr8_4:54219494-54219513 None:intergenic 60.0%
!! CTGCACTGGTTTCTGGGCAG+TGG + chr8_4:54219497-54219516 None:intergenic 60.0%
CACCCGTGGATGAGAGAAGG+TGG - chr8_4:54221473-54221492 Msa1333970:intron 60.0%
! ACGAGAAGGGGGTGCAGCAG+CGG + chr8_4:54219371-54219390 None:intergenic 65.0%
TACACCGGCGGGACGAGAAG+GGG + chr8_4:54219383-54219402 None:intergenic 65.0%
CTACACCGGCGGGACGAGAA+GGG + chr8_4:54219384-54219403 None:intergenic 65.0%
TCTACACCGGCGGGACGAGA+AGG + chr8_4:54219385-54219404 None:intergenic 65.0%
! AAGGGGGTGCAGCAGCGGGA+CGG + chr8_4:54219366-54219385 None:intergenic 70.0%
! CGAGAAGGGGGTGCAGCAGC+GGG + chr8_4:54219370-54219389 None:intergenic 70.0%
ACACCGGCGGGACGAGAAGG+GGG + chr8_4:54219382-54219401 None:intergenic 70.0%
! AGGGGGTGCAGCAGCGGGAC+GGG + chr8_4:54219365-54219384 None:intergenic 75.0%
GCACCCCCTTCTCGTCCCGC+CGG - chr8_4:54219376-54219395 Msa1333970:three_prime_UTR 75.0%
! GGTGCAGCAGCGGGACGGGC+AGG + chr8_4:54219361-54219380 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 54219286 54223904 54219286 ID=Msa1333970;Name=Msa1333970
chr8_4 mRNA 54219286 54223904 54219286 ID=Msa1333970-mRNA-1;Parent=Msa1333970;Name=Msa1333970-mRNA-1;_AED=0.33;_eAED=0.34;_QI=0|0.75|0.77|1|0.87|0.88|9|594|354
chr8_4 exon 54219286 54219954 54219286 ID=Msa1333970-mRNA-1:exon:16851;Parent=Msa1333970-mRNA-1
chr8_4 exon 54220033 54220132 54220033 ID=Msa1333970-mRNA-1:exon:16850;Parent=Msa1333970-mRNA-1
chr8_4 exon 54220723 54220850 54220723 ID=Msa1333970-mRNA-1:exon:16849;Parent=Msa1333970-mRNA-1
chr8_4 exon 54220951 54221118 54220951 ID=Msa1333970-mRNA-1:exon:16848;Parent=Msa1333970-mRNA-1
chr8_4 exon 54221604 54221719 54221604 ID=Msa1333970-mRNA-1:exon:16847;Parent=Msa1333970-mRNA-1
chr8_4 exon 54222056 54222208 54222056 ID=Msa1333970-mRNA-1:exon:16846;Parent=Msa1333970-mRNA-1
chr8_4 exon 54222312 54222455 54222312 ID=Msa1333970-mRNA-1:exon:16845;Parent=Msa1333970-mRNA-1
chr8_4 exon 54222516 54222543 54222516 ID=Msa1333970-mRNA-1:exon:16844;Parent=Msa1333970-mRNA-1
chr8_4 exon 54223752 54223904 54223752 ID=Msa1333970-mRNA-1:exon:16843;Parent=Msa1333970-mRNA-1
chr8_4 CDS 54223752 54223904 54223752 ID=Msa1333970-mRNA-1:cds;Parent=Msa1333970-mRNA-1
chr8_4 CDS 54222516 54222543 54222516 ID=Msa1333970-mRNA-1:cds;Parent=Msa1333970-mRNA-1
chr8_4 CDS 54222312 54222455 54222312 ID=Msa1333970-mRNA-1:cds;Parent=Msa1333970-mRNA-1
chr8_4 CDS 54222056 54222208 54222056 ID=Msa1333970-mRNA-1:cds;Parent=Msa1333970-mRNA-1
chr8_4 CDS 54221604 54221719 54221604 ID=Msa1333970-mRNA-1:cds;Parent=Msa1333970-mRNA-1
chr8_4 CDS 54220951 54221118 54220951 ID=Msa1333970-mRNA-1:cds;Parent=Msa1333970-mRNA-1
chr8_4 CDS 54220723 54220850 54220723 ID=Msa1333970-mRNA-1:cds;Parent=Msa1333970-mRNA-1
chr8_4 CDS 54220033 54220132 54220033 ID=Msa1333970-mRNA-1:cds;Parent=Msa1333970-mRNA-1
chr8_4 CDS 54219880 54219954 54219880 ID=Msa1333970-mRNA-1:cds;Parent=Msa1333970-mRNA-1
chr8_4 three_prime_UTR 54219286 54219879 54219286 ID=Msa1333970-mRNA-1:three_prime_utr;Parent=Msa1333970-mRNA-1
Gene Sequence

>Msa1333970

ATGGGTTGTCACGGCAGCAAGGAGAAGAAACATGCCAAAGATGAGTTTACTGCCCGTCATCATAGATCATCACCTGCCCGTCCCGCTGCTGCACCCCCTTCTCGTCCCGCCGGTGTAGATAGTAATTATCGTTACATCAATGTTCCACCTCAGTTTCAAAGGAATTACATGTTGCTTCCTGGAAAAGTTTACCGTGATATGGTAGGCAGTGCTTACTATGTTGCCCCTGAGGTACTTCGTCGTAATTATGGAAAGGAAATAGACATTTGGAGTGCAGGCATCATATTGTATATTCTGCTTAGTGGTGTACCACCTTTTTGGGCTGAAACTGAAAAGGGAATATTTAATGCTATATTGGAAGGTGAACTCGACTTTGTTAGTGAACCATGGCCATCAATATCCGAAAGTGCCAAAGATCTAGTCCGGAAGATGCTGACACCAGATCCAAAGAAGAGAATCACTTCTACAGAAGTCCTTGAACACCCGTGGATGAGAGAAGGTGGAGAAGCCTCCGATAAACCGATTGATAGTGCAGTTCTATCTAGAATGAAACAATTCAGGGCAATGAACAAGTTCAAGAAACTTGCATTGAAGGTTATGGCTGAAAATTTATCAGAAGAAGAGATTAAAGGTCTCAAGGCAATGTTTGCAAACATGGACACTGATAGTAGTGGCACGATCACTTATGAAGAACTGAAGACAGGCTTGGCTCGAATTGGATCAAGACTGTCTGAGGCTGAAGTGAAACAGCTTATGGAAGCTGCTGATGTTGATGGAAATGGGTCGATTGACTATCTTGAATTCATATCGGCTACAATGCATAGGCACAGACTTGAGCGGGATGAACATCTTTACAAAGCATTCCAGTATTTTGATAAGGACAATAGTGGGCATATTACTAGAGAAGAATTGGAGACTGCCATGACAAAGCATGGAATGGGTGATGAAGCAACGATAAAGGAAATCATTTCTGAGGTGGATACAGATAATGATGGGAGAATAAATTATGAGGAATTCTGTGCAATGATGAGAAGTGGAATGCCACACCAGGGACCATTATTTTAA

Protein sequence

>Msa1333970

MGCHGSKEKKHAKDEFTARHHRSSPARPAAAPPSRPAGVDSNYRYINVPPQFQRNYMLLPGKVYRDMVGSAYYVAPEVLRRNYGKEIDIWSAGIILYILLSGVPPFWAETEKGIFNAILEGELDFVSEPWPSISESAKDLVRKMLTPDPKKRITSTEVLEHPWMREGGEASDKPIDSAVLSRMKQFRAMNKFKKLALKVMAENLSEEEIKGLKAMFANMDTDSSGTITYEELKTGLARIGSRLSEAEVKQLMEAADVDGNGSIDYLEFISATMHRHRLERDEHLYKAFQYFDKDNSGHITREELETAMTKHGMGDEATIKEIISEVDTDNDGRINYEEFCAMMRSGMPHQGPLF*