AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1156520

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1156520 MtrunA17_Chr7g0249941 92.666 1009 53 3 17 1017 17 1012 0.0 1569
Msa1156520 MtrunA17_Chr8g0347491 56.751 985 297 24 128 1004 96 1059 0.0 885
Msa1156520 MtrunA17_Chr4g0045881 58.491 477 181 6 551 1012 414 888 9.78e-177 538
Msa1156520 MtrunA17_Chr5g0401291 59.908 434 162 5 568 994 460 888 2.40e-164 506
Msa1156520 MtrunA17_Chr4g0054001 58.515 458 173 7 568 1017 409 857 2.59e-163 502
Msa1156520 MtrunA17_Chr1g0192111 52.217 406 177 8 573 970 497 893 1.82e-122 396
Msa1156520 MtrunA17_Chr4g0042081 48.426 413 196 7 568 970 531 936 1.07e-113 374
Msa1156520 MtrunA17_Chr2g0319201 48.926 419 190 8 568 970 390 800 1.59e-111 365
Msa1156520 MtrunA17_Chr4g0023611 48.456 421 190 8 565 970 394 802 2.81e-110 362
Msa1156520 MtrunA17_Chr2g0323071 45.972 422 207 7 571 979 316 729 1.23e-104 345
Msa1156520 MtrunA17_Chr5g0414941 38.710 434 227 9 569 971 410 835 3.31e-86 296
Msa1156520 MtrunA17_Chr8g0364331 38.596 456 245 11 545 972 279 727 8.86e-86 292
Msa1156520 MtrunA17_Chr3g0118231 32.959 534 319 14 503 1014 179 695 1.03e-71 252
Msa1156520 MtrunA17_Chr4g0061111 27.461 386 229 15 574 919 1171 1545 1.14e-29 128
Msa1156520 MtrunA17_Chr4g0074091 25.401 374 239 9 573 938 792 1133 6.10e-28 122
Msa1156520 MtrunA17_Chr1g0150261 24.242 429 256 13 502 917 1313 1685 3.30e-26 117
Msa1156520 MtrunA17_Chr3g0091511 25.455 385 238 13 574 919 1584 1958 3.50e-26 117
Msa1156520 MtrunA17_Chr5g0409151 32.075 106 72 0 708 813 5 110 1.50e-13 72.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1156520 AT3G25500.1 70.303 495 126 6 524 1004 538 1025 0.0 694
Msa1156520 AT3G25500.1 41.346 208 97 7 100 288 63 264 3.80e-17 87.4
Msa1156520 AT2G43800.1 54.118 510 182 9 501 993 400 874 7.47e-162 500
Msa1156520 AT5G67470.1 59.535 430 157 5 570 994 458 875 8.74e-159 492
Msa1156520 AT3G05470.1 50.122 411 188 7 572 973 469 871 3.41e-118 384
Msa1156520 AT5G54650.2 49.282 418 191 6 567 970 436 846 2.05e-116 380
Msa1156520 AT5G54650.1 49.282 418 191 6 567 970 436 846 2.05e-116 380
Msa1156520 AT5G48360.1 49.354 387 158 9 588 971 430 781 1.11e-106 350
Msa1156520 AT3G07540.1 43.237 414 184 5 562 970 467 834 6.13e-88 301
Msa1156520 AT1G70140.1 38.987 454 231 10 567 987 299 739 3.82e-82 283
Msa1156520 AT1G59910.1 37.674 430 238 10 559 970 448 865 8.15e-82 286
Msa1156520 AT3G25493.1 73.504 117 31 0 888 1004 31 147 5.89e-55 188
Msa1156520 AT1G24150.2 42.180 211 117 4 573 781 312 519 5.17e-42 162
Msa1156520 AT5G07740.1 27.154 383 224 11 571 938 1244 1586 1.45e-31 134
Msa1156520 AT5G07740.3 27.154 383 224 11 571 938 1222 1564 1.50e-31 134
Msa1156520 AT5G07740.2 25.420 417 222 12 571 938 1244 1620 9.90e-28 122
Msa1156520 AT5G58160.1 24.079 407 265 10 573 971 838 1208 5.06e-27 119
Msa1156520 AT1G31810.2 24.474 380 238 10 571 938 816 1158 1.72e-26 118
Msa1156520 AT1G31810.1 24.474 380 238 10 571 938 816 1158 1.72e-26 118
Msa1156520 AT5G07770.1 22.872 376 244 7 569 938 187 522 3.77e-26 115
Msa1156520 AT5G07770.3 22.872 376 244 7 569 938 194 529 4.27e-26 115
Msa1156520 AT5G07770.4 22.872 376 244 7 569 938 53 388 1.76e-25 113
Msa1156520 AT4G15200.2 44.444 135 64 4 571 700 328 456 8.77e-24 106
Msa1156520 AT4G15200.4 44.444 135 64 4 571 700 327 455 9.01e-24 106
Msa1156520 AT5G07770.2 22.034 354 231 6 591 938 181 495 4.09e-22 103
Msa1156520 AT3G32400.2 22.926 458 295 14 544 984 69 485 6.30e-22 101
Msa1156520 AT5G07760.1 23.256 301 202 4 638 938 523 794 6.29e-21 99.8
Msa1156520 AT5G07760.2 23.929 280 184 4 638 917 523 773 6.84e-21 99.4
Msa1156520 AT2G25050.1 21.616 458 280 14 568 984 739 1158 5.56e-20 96.7
Msa1156520 AT5G07650.2 23.656 279 184 4 639 917 470 719 6.37e-19 93.2
Msa1156520 AT5G07780.1 25.194 258 167 6 570 813 74 319 7.25e-17 85.1
Msa1156520 AT3G32400.1 22.414 464 291 16 544 984 61 478 3.56e-16 83.2
Msa1156520 AT4G15200.3 42.718 103 50 3 571 668 328 426 5.29e-16 82.4
Msa1156520 AT5G07650.1 22.442 303 182 5 639 917 470 743 8.64e-16 82.8

Find 263 sgRNAs with CRISPR-Local

Find 365 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACCCTCCTCTTTCGGTTTC+CGG 0.131507 7_4:-44785761 None:intergenic
TCTTCATCAAAATCTCTTTC+TGG 0.145777 7_4:-44785470 None:intergenic
TTGGGTCTTGGTTTGGGTTT+TGG 0.147743 7_4:-44784593 None:intergenic
TGTAGATTATGTAGAGTAAA+AGG 0.150373 7_4:+44788082 Msa1156520:three_prime_UTR
ATATACCTTTCGCGTTTAAA+AGG 0.176043 7_4:+44787057 Msa1156520:CDS
TCTTGTTCTTCTTCTTCTTT+TGG 0.190480 7_4:+44785293 Msa1156520:CDS
TGTAAAGAGAGCTGCTACTA+TGG 0.212167 7_4:+44787580 Msa1156520:CDS
ATCATTAGAAGAGAGATTTA+TGG 0.254085 7_4:+44785529 Msa1156520:CDS
TCATCCATTCAGAATCTTCT+TGG 0.257716 7_4:+44787850 Msa1156520:CDS
GTGGGAATAGTGGTGGAAAA+TGG 0.261852 7_4:-44784537 None:intergenic
TCAGAAACACTTGACATTCT+TGG 0.271864 7_4:-44785680 None:intergenic
CAATGCAGCGGCTTCAATTT+CGG 0.276329 7_4:-44786061 None:intergenic
TTGTGACTTGGTGAGGCTTC+TGG 0.279472 7_4:-44785392 None:intergenic
CTAGAAGCTGTACTTAAAAC+TGG 0.281454 7_4:+44787302 Msa1156520:CDS
ACTGGGAACCGCATGAATAT+TGG 0.287264 7_4:+44787320 Msa1156520:CDS
ATGCTTCCACAACCACTTCC+TGG 0.312949 7_4:+44787983 Msa1156520:CDS
TAAGGAGATGGTAAACAAAA+AGG 0.315615 7_4:-44784337 None:intergenic
TTGTTTACCATCTCCTTAGA+AGG 0.318828 7_4:+44784342 Msa1156520:CDS
TTGTTAGAAGAGTGAGAAGT+TGG 0.321082 7_4:-44784765 None:intergenic
TGCTAAGTTTGTAGTTCCTT+TGG 0.322562 7_4:-44787639 None:intergenic
GGTGATGAAAGAGGGTAGTT+TGG 0.322808 7_4:-44784663 None:intergenic
GAAAAGCTCAACGCTGCTTT+CGG 0.334208 7_4:-44784913 None:intergenic
GGTGTTGGTGGTGGTGGTTG+TGG 0.341327 7_4:-44784474 None:intergenic
TTGTTGTTGAGAAAGATAAA+AGG 0.349953 7_4:-44784381 None:intergenic
GCTCTTAATGTCACAATAGA+AGG 0.351924 7_4:+44786664 Msa1156520:CDS
AGCATTGGATTAACCGGAAC+AGG 0.353608 7_4:-44787965 None:intergenic
GGTCATGCAGTTAATCAAAA+AGG 0.353969 7_4:+44787664 Msa1156520:CDS
GCAGTAGCGGAGAGTGCTAT+AGG 0.356557 7_4:-44784795 None:intergenic
CTCTGTCGCTGCTGCGGCAG+AGG 0.358697 7_4:-44785887 None:intergenic
GCAGCTAAACCCTCCTCTTT+CGG 0.371890 7_4:-44785768 None:intergenic
GGCCGAGGTGATGGAGGTTC+GGG 0.372339 7_4:-44785113 None:intergenic
AGTGGTGGAAAATGGGTGTT+TGG 0.377870 7_4:-44784529 None:intergenic
TCCTCCTCGCGGCGGTGGTT+CGG 0.377936 7_4:+44785034 Msa1156520:CDS
GAGGAAGCATTGGGAGATTC+CGG 0.379113 7_4:+44785823 Msa1156520:CDS
AACTACAAGCTCTACTTTGA+TGG 0.379293 7_4:+44787493 Msa1156520:CDS
TAGTGGAAGAAGTAGATTAT+TGG 0.381726 7_4:-44784220 None:intergenic
GAAACATTAGATAGCCTTGA+TGG 0.385953 7_4:-44785584 None:intergenic
AGTGGTGGTGTTGGTGGTGG+TGG 0.392985 7_4:-44784480 None:intergenic
GCAAGTAGTGAAGGTGGTGG+TGG 0.395385 7_4:-44784687 None:intergenic
CGCTGCTGCGGCAGAGGAGG+AGG 0.400646 7_4:-44785881 None:intergenic
GGATCTTAGAGTCTTGTTGC+CGG 0.400714 7_4:-44784892 None:intergenic
GTGATGAAAGAGGGTAGTTT+GGG 0.401848 7_4:-44784662 None:intergenic
TTACGTTCTTCTTCCTTGCT+CGG 0.403108 7_4:-44786963 None:intergenic
CGGTTTCCGGTGATGAAAGT+AGG 0.405262 7_4:-44785748 None:intergenic
AGCTAATAAATTCCCTGTTC+CGG 0.408596 7_4:+44787952 Msa1156520:CDS
CGGTGGAAGTACGACGGTTA+TGG 0.410640 7_4:-44784872 None:intergenic
CGAAATTGAAGCCGCTGCAT+TGG 0.411426 7_4:+44786062 Msa1156520:CDS
TCAGATTAGAAACAACTTGT+AGG 0.412466 7_4:-44787541 None:intergenic
CGGCCGAGGTGATGGAGGTT+CGG 0.412828 7_4:-44785114 None:intergenic
GGTGGTTGTGGAGGTGATTG+TGG 0.414782 7_4:-44784462 None:intergenic
AATGAACAACTTTATTAGAA+TGG 0.416996 7_4:+44787724 Msa1156520:CDS
AGAGGAGGAGGCGGCGGTGG+TGG 0.419607 7_4:-44785869 None:intergenic
TCGCCGAGAGGCTCTTCTCT+TGG 0.420622 7_4:+44785179 Msa1156520:CDS
CTCTGCCCTCCTGACTTGGC+AGG 0.422636 7_4:-44786597 None:intergenic
TAATGATGCATGTGCATTTG+TGG 0.422704 7_4:-44785513 None:intergenic
GGTGATTGTGGTGGTTCAGA+TGG 0.426482 7_4:-44784450 None:intergenic
GCAATCTGCTTCGATATAAC+CGG 0.429038 7_4:-44785842 None:intergenic
ACTCCTCCTCCTCGCGGCGG+TGG 0.429843 7_4:+44785029 Msa1156520:CDS
CAAGTAGTGAAGGTGGTGGT+GGG 0.430910 7_4:-44784686 None:intergenic
GTGGTGGAAAATGGGTGTTT+GGG 0.430966 7_4:-44784528 None:intergenic
TGTGGAAGCATTGGATTAAC+CGG 0.432462 7_4:-44787971 None:intergenic
CAGCTCTCTTTACATTTGAT+AGG 0.433341 7_4:-44787571 None:intergenic
TGGGAATAGTGGTGGAAAAT+GGG 0.434055 7_4:-44784536 None:intergenic
TGAAGTGGTGGTGTTGGTGG+TGG 0.437648 7_4:-44784483 None:intergenic
TTGTTGTGTTCTCCGGGGAT+TGG 0.439244 7_4:-44785363 None:intergenic
GGCAGAGGAGGAGGCGGCGG+TGG 0.439811 7_4:-44785872 None:intergenic
AGAAGAGTGAGAAGTTGGTT+GGG 0.440050 7_4:-44784760 None:intergenic
CACCATTTCCCTCTCAGAGC+TGG 0.440589 7_4:-44786098 None:intergenic
TAGCTGCAATTCAAACCAAT+GGG 0.441840 7_4:+44785784 Msa1156520:CDS
GAAGAGTGAGAAGTTGGTTG+GGG 0.444019 7_4:-44784759 None:intergenic
ATTAGGGAGGAGATGTTAGC+AGG 0.446318 7_4:-44784723 None:intergenic
GAAAATGGGAGAAGTGGTAG+TGG 0.446722 7_4:-44784237 None:intergenic
GTAGATTATGTAGAGTAAAA+GGG 0.447346 7_4:+44788083 Msa1156520:three_prime_UTR
GGTTCTTCCCCTGCCAAGTC+AGG 0.450610 7_4:+44786588 Msa1156520:CDS
GAATGAAGTGGTGGTGTTGG+TGG 0.450673 7_4:-44784486 None:intergenic
TCCGACATCGACGACGGGTT+CGG 0.451094 7_4:-44784946 None:intergenic
GAAATTGAAGCCGCTGCATT+GGG 0.452502 7_4:+44786063 Msa1156520:CDS
GTGGTACGGAATCATCTTCC+CGG 0.452848 7_4:+44785219 Msa1156520:CDS
TTCTTCACAGAGGAAGCATT+GGG 0.453977 7_4:+44785814 Msa1156520:CDS
TGAGTAGGGTTGTTATCTGT+GGG 0.455616 7_4:-44784555 None:intergenic
AACGGCGGAGAATGCTCGCC+GGG 0.456657 7_4:-44785237 None:intergenic
TATACCTTTCGCGTTTAAAA+GGG 0.459629 7_4:+44787058 Msa1156520:CDS
ATCAACCTCGGTCAAATTTG+AGG 0.460049 7_4:+44785948 Msa1156520:CDS
CAGTAGCGGAGAGTGCTATA+GGG 0.460662 7_4:-44784794 None:intergenic
ACTGAAGGCATTCGTCTCTC+TGG 0.460833 7_4:+44787461 Msa1156520:CDS
TAGAAGAGTGAGAAGTTGGT+TGG 0.461046 7_4:-44784761 None:intergenic
ATGAGAATGAGATCCTTCTA+AGG 0.461455 7_4:-44784355 None:intergenic
GTTGGTGGTGGTGGTTGTGG+AGG 0.465309 7_4:-44784471 None:intergenic
TGCTGCGGCAGAGGAGGAGG+CGG 0.466433 7_4:-44785878 None:intergenic
TCTTTCCTTCCGTGTAATCC+AGG 0.468456 7_4:-44788001 None:intergenic
GGTGGAAGAGGCCGGAGCTC+CGG 0.468597 7_4:-44785077 None:intergenic
AGTAGTGAAGGTGGTGGTGG+GGG 0.471373 7_4:-44784684 None:intergenic
AGGGTTTGGTGAAGTGAAAG+AGG 0.471823 7_4:-44784270 None:intergenic
TTGGGAAGTGTCTAGAAGTT+CGG 0.478983 7_4:+44785916 Msa1156520:CDS
TGCGGCAGAGGAGGAGGCGG+CGG 0.479700 7_4:-44785875 None:intergenic
GCGCTAACGGTGGAAGAGGC+CGG 0.481073 7_4:-44785085 None:intergenic
TGTCGCTGCTGCGGCAGAGG+AGG 0.483933 7_4:-44785884 None:intergenic
TTGAGTAGGGTTGTTATCTG+TGG 0.485522 7_4:-44784556 None:intergenic
AACTTGAATCGCCGGAGCTC+CGG 0.486584 7_4:+44785066 Msa1156520:CDS
AAGAGAGAAAATGGGAGAAG+TGG 0.488402 7_4:-44784243 None:intergenic
TTTCTTCACAGAGGAAGCAT+TGG 0.492031 7_4:+44785813 Msa1156520:CDS
ACTTGATTCTGCAACACAAA+AGG 0.493421 7_4:-44785998 None:intergenic
AGTACTCTGCCCTCCTGACT+TGG 0.493526 7_4:-44786601 None:intergenic
CTTCCGTGTAATCCAGGAAG+TGG 0.493531 7_4:-44787995 None:intergenic
GAACCACCGCCGCGAGGAGG+AGG 0.495135 7_4:-44785032 None:intergenic
CCGAGAGGCTCTTCTCTTGG+TGG 0.496394 7_4:+44785182 Msa1156520:CDS
GGAAGTGGTTGTGGAAGCAT+TGG 0.496409 7_4:-44787980 None:intergenic
GGAAGAAGAACGTAAATTGA+AGG 0.496485 7_4:+44786971 Msa1156520:CDS
CGGAGTTAGCACCTCCTTCG+AGG 0.496606 7_4:+44785975 Msa1156520:CDS
AACCAGCTCTGAGAGGGAAA+TGG 0.501834 7_4:+44786096 Msa1156520:CDS
GATTGTGGTGGTTCAGATGG+AGG 0.506943 7_4:-44784447 None:intergenic
GATGTCAAGTGTCGGAGGCT+TGG 0.507278 7_4:+44787518 Msa1156520:CDS
GGAGAATGAAGTGGTGGTGT+TGG 0.508015 7_4:-44784489 None:intergenic
AGCCGCGCTAACGGTGGAAG+AGG 0.508476 7_4:-44785089 None:intergenic
TGTAATCCAGGAAGTGGTTG+TGG 0.511028 7_4:-44787989 None:intergenic
CTCTGCCGCAGCAGCGACAG+AGG 0.511956 7_4:+44785888 Msa1156520:CDS
AGAGAGTTCAATGGCACAAA+GGG 0.512682 7_4:-44784423 None:intergenic
GTGAAGAAAATGTTCCCCAT+TGG 0.513587 7_4:-44785799 None:intergenic
TCTTCCCCTGCCAAGTCAGG+AGG 0.516399 7_4:+44786591 Msa1156520:CDS
GGTTTCCGGTGATGAAAGTA+GGG 0.521115 7_4:-44785747 None:intergenic
TGGTGGAAAATGGGTGTTTG+GGG 0.524503 7_4:-44784527 None:intergenic
TCCACGTGTTGGTTGTGACT+TGG 0.524865 7_4:-44785404 None:intergenic
GGTGCCGAGGTAGAGAAAAT+CGG 0.524971 7_4:-44784979 None:intergenic
TTTCTCAGCAACATCAAGCT+TGG 0.525855 7_4:-44787015 None:intergenic
GTTGTTATCTGTGGGAATAG+TGG 0.526578 7_4:-44784547 None:intergenic
GGTGTGAGGAAGAATTAGGG+AGG 0.528955 7_4:-44784736 None:intergenic
TCTGCCCTCCTGACTTGGCA+GGG 0.529210 7_4:-44786596 None:intergenic
CACGGATGCTGCTCCACGAT+CGG 0.530739 7_4:+44786567 Msa1156520:CDS
GACAGGGTCTGCAAAGAAGT+TGG 0.533837 7_4:+44787899 Msa1156520:CDS
GACGGTTATGGAGGCGTCGT+CGG 0.534979 7_4:-44784860 None:intergenic
TCCGGTGATGAAAGTAGGGC+TGG 0.535777 7_4:-44785743 None:intergenic
CTCTGAGAGGGAAATGGTGT+GGG 0.536088 7_4:+44786102 Msa1156520:CDS
GGTTCGGGAAGCCGCGCTAA+CGG 0.536512 7_4:-44785098 None:intergenic
GCTGATGTCAAAGGAGCAGA+TGG 0.537807 7_4:+44787395 Msa1156520:CDS
CGCCGGCGAGTTCCAATCCC+CGG 0.538306 7_4:+44785351 Msa1156520:CDS
CTGCCCTCCTGACTTGGCAG+GGG 0.540534 7_4:-44786595 None:intergenic
ACGAGAAAGCTCCGGTGGTA+CGG 0.541677 7_4:+44785205 Msa1156520:CDS
CGATCGTGGAGCAGCATCCG+TGG 0.541719 7_4:-44786566 None:intergenic
CAGGAGATTATTAGAACTGA+AGG 0.542618 7_4:+44787446 Msa1156520:CDS
GCAGCGACAGAGGAAACATT+GGG 0.543791 7_4:+44785898 Msa1156520:CDS
ATGAGATCCTTCTAAGGAGA+TGG 0.545454 7_4:-44784349 None:intergenic
CTTGGTGGACGAGAAAGCTC+CGG 0.546839 7_4:+44785197 Msa1156520:CDS
CGGCGATTGTTTATCAACCT+CGG 0.547175 7_4:+44785936 Msa1156520:CDS
GAGGAGTTTCATCGATTCCA+CGG 0.548464 7_4:-44785013 None:intergenic
CTCAAGTTGGCTGATGTCAA+AGG 0.549222 7_4:+44787386 Msa1156520:CDS
CTTTATCAGAACAACCATCA+AGG 0.549563 7_4:+44785570 Msa1156520:CDS
TTTCCTCCGACATCGACGAC+GGG 0.551052 7_4:-44784951 None:intergenic
AAATATTGCAATCTTGCTCA+AGG 0.552800 7_4:+44786642 Msa1156520:CDS
AAGTAGTGAAGGTGGTGGTG+GGG 0.553293 7_4:-44784685 None:intergenic
TTAGCTGCAATTCAAACCAA+TGG 0.553433 7_4:+44785783 Msa1156520:CDS
AGCAGCGACAGAGGAAACAT+TGG 0.553796 7_4:+44785897 Msa1156520:CDS
GCCGAACCCGTCGTCGATGT+CGG 0.553862 7_4:+44784945 Msa1156520:CDS
CAACCACTTCCTGGATTACA+CGG 0.555171 7_4:+44787992 Msa1156520:CDS
GGTTGTGGAGGTGATTGTGG+TGG 0.555373 7_4:-44784459 None:intergenic
ACTCGATACACTTCTCAAGT+TGG 0.557366 7_4:+44787373 Msa1156520:CDS
TGAACTTTAATTGAAAGCAA+AGG 0.557406 7_4:-44788174 None:intergenic
GGAGATGGCAACAGCGACGA+CGG 0.558520 7_4:-44784823 None:intergenic
GACATCACTGCTGAGAACTT+CGG 0.559866 7_4:-44787606 None:intergenic
AGTGAGAACCAGCTCTGAGA+GGG 0.560131 7_4:+44786090 Msa1156520:CDS
GAAATAAAGAAAGACGGAGA+TGG 0.562059 7_4:-44784838 None:intergenic
TCGGTCAAATTTGAGGCCGC+CGG 0.562247 7_4:+44785955 Msa1156520:CDS
ATTGTGGTGGTTCAGATGGA+GGG 0.563324 7_4:-44784446 None:intergenic
AGGAGTTTCATCGATTCCAC+GGG 0.565330 7_4:-44785012 None:intergenic
ACAACCAAGAAGATTCTGAA+TGG 0.566605 7_4:-44787854 None:intergenic
TTATCGTAAACTTGAATCGC+CGG 0.567814 7_4:+44785058 Msa1156520:CDS
ACCAGCCCTACTTTCATCAC+CGG 0.568618 7_4:+44785742 Msa1156520:CDS
GGTTGGTTGCAGATTGAATG+AGG 0.569304 7_4:+44786498 Msa1156520:intron
AGAGGTACCGATGACATACC+AGG 0.573289 7_4:-44785716 None:intergenic
TCAGCAACATCAAGCTTGGT+CGG 0.574627 7_4:-44787011 None:intergenic
GGTCGAAGCAATGCTTTACA+TGG 0.576745 7_4:+44787079 Msa1156520:CDS
CAACGGCGGAGAATGCTCGC+CGG 0.577390 7_4:-44785238 None:intergenic
GGAAGATGATTCCGTACCAC+CGG 0.578216 7_4:-44785216 None:intergenic
AAAATCATTTCAAACTCTAG+AGG 0.578838 7_4:+44787133 Msa1156520:CDS
ACGATGAAGATGATGTATCA+AGG 0.579992 7_4:+44785644 Msa1156520:CDS
TGCAACACAAAAGGCCTCGA+AGG 0.581456 7_4:-44785989 None:intergenic
GGTCTGCAAAGAAGTTGGTA+TGG 0.582892 7_4:+44787904 Msa1156520:CDS
TCTTAGAGTCTTGTTGCCGG+TGG 0.583001 7_4:-44784889 None:intergenic
TTTGCAGACCCTGTCAAGAA+CGG 0.583252 7_4:-44787891 None:intergenic
CACTTCCTGGATTACACGGA+AGG 0.583953 7_4:+44787996 Msa1156520:CDS
ACCGAACCACCGCCGCGAGG+AGG 0.585859 7_4:-44785035 None:intergenic
AACAAATCGCGGTGATGCAG+AGG 0.590186 7_4:+44787343 Msa1156520:CDS
AAGAGTGAGAAGTTGGTTGG+GGG 0.592124 7_4:-44784758 None:intergenic
GCTCTGAGAGGGAAATGGTG+TGG 0.593039 7_4:+44786101 Msa1156520:CDS
CATAACCGTCGTACTTCCAC+CGG 0.595014 7_4:+44784873 Msa1156520:CDS
CAACTTTATTAGAATGGCCG+AGG 0.595254 7_4:+44787730 Msa1156520:CDS
GACGACGGCGACTGCAGTAG+CGG 0.595815 7_4:-44784808 None:intergenic
CTTCCCCTGCCAAGTCAGGA+GGG 0.596399 7_4:+44786592 Msa1156520:CDS
GAAAGTAGGGCTGGTGACAG+AGG 0.597172 7_4:-44785734 None:intergenic
CCACGCGGCCGAGGTGATGG+AGG 0.597809 7_4:-44785119 None:intergenic
AGAGTGAGAAGTTGGTTGGG+GGG 0.599147 7_4:-44784757 None:intergenic
GGCAGGGGAAGAACCGATCG+TGG 0.604257 7_4:-44786580 None:intergenic
GATCGTGGAGCAGCATCCGT+GGG 0.605404 7_4:-44786565 None:intergenic
AAGAACGATATTCCACGTGT+TGG 0.606746 7_4:-44785415 None:intergenic
TCTGACGGTTCAAAGCTACC+TGG 0.607475 7_4:+44785698 Msa1156520:CDS
GTTTCCTCCGACATCGACGA+CGG 0.608119 7_4:-44784952 None:intergenic
GATGGAGGGAGAGAGTTCAA+TGG 0.609634 7_4:-44784432 None:intergenic
GAAGCAAAAGCAAGTAGTGA+AGG 0.609761 7_4:-44784696 None:intergenic
CTTTATTAGAATGGCCGAGG+AGG 0.610093 7_4:+44787733 Msa1156520:CDS
TGTTTCCTCTGTCGCTGCTG+CGG 0.610509 7_4:-44785893 None:intergenic
CTCGAAGGAGGTGCTAACTC+CGG 0.611270 7_4:-44785974 None:intergenic
TTCGATGAGTCTCTCACCGC+CGG 0.614410 7_4:+44785334 Msa1156520:CDS
ATTCTGTAATCTCCTTCACA+AGG 0.615167 7_4:-44787796 None:intergenic
GATGTCTTGAAACTTTCCAA+AGG 0.615543 7_4:+44787623 Msa1156520:CDS
CTCACTTTATCCCAATGCAG+CGG 0.615606 7_4:-44786073 None:intergenic
TCATCACCGGAAACCGAAAG+AGG 0.616447 7_4:+44785755 Msa1156520:CDS
TACAACAAAATGTAGTAGAG+TGG 0.617486 7_4:-44787423 None:intergenic
ATGGCACAAAGGGTTCATGA+AGG 0.619990 7_4:-44784413 None:intergenic
GAGAGAGTTCAATGGCACAA+AGG 0.620151 7_4:-44784424 None:intergenic
TAGAAGCTGTACTTAAAACT+GGG 0.620655 7_4:+44787303 Msa1156520:CDS
AAAGCTACCTGGTATGTCAT+CGG 0.620825 7_4:+44785709 Msa1156520:CDS
GTTGCTTCTGTTAACGACAA+CGG 0.620858 7_4:-44785255 None:intergenic
CACCGGAAACCGAAAGAGGA+GGG 0.623565 7_4:+44785759 Msa1156520:CDS
CCACCAAGAGAAGAGCCTCT+CGG 0.628865 7_4:-44785182 None:intergenic
TGTTGCTTTGACCCTTGTGA+AGG 0.629396 7_4:+44787784 Msa1156520:CDS
AACACAAAAGGCCTCGAAGG+AGG 0.629708 7_4:-44785986 None:intergenic
TGATGGAAGATGTCAAGTGT+CGG 0.630059 7_4:+44787510 Msa1156520:CDS
TCAAGTGACAAATGAGTGTG+TGG 0.633319 7_4:+44786015 Msa1156520:CDS
TCACCGGAAACCGAAAGAGG+AGG 0.633487 7_4:+44785758 Msa1156520:CDS
AAACTCTTCATCTTCCTCGT+CGG 0.633851 7_4:-44785153 None:intergenic
TTCCCGAACCTCCATCACCT+CGG 0.633907 7_4:+44785111 Msa1156520:CDS
ATGAATATTGGAACAAATCG+CGG 0.634822 7_4:+44787332 Msa1156520:CDS
TAGGATCTGATGAAAGCAGT+CGG 0.635638 7_4:+44787687 Msa1156520:CDS
TGGAAGTACGACGGTTATGG+AGG 0.636481 7_4:-44784869 None:intergenic
GGCCTCTTCCACCGTTAGCG+CGG 0.636580 7_4:+44785087 Msa1156520:CDS
CTCATCGAATGAGACTGCTC+CGG 0.636849 7_4:-44785320 None:intergenic
AGAATGTCAAGTGTTTCTGA+CGG 0.641746 7_4:+44785683 Msa1156520:CDS
CAAGTGACAAATGAGTGTGT+GGG 0.644325 7_4:+44786016 Msa1156520:CDS
GGCACCGTTGTAAACTCCCG+TGG 0.647193 7_4:+44784996 Msa1156520:CDS
GCAAAAGCAAGTAGTGAAGG+TGG 0.647740 7_4:-44784693 None:intergenic
GTGTTGGTTGTGACTTGGTG+AGG 0.647854 7_4:-44785399 None:intergenic
CCTCCATCACCTCGGCCGCG+TGG 0.648098 7_4:+44785119 Msa1156520:CDS
GATTTGTTCCAATATTCATG+CGG 0.648202 7_4:-44787328 None:intergenic
TGGAAGATGTCAAGTGTCGG+AGG 0.653195 7_4:+44787513 Msa1156520:CDS
GAACCCGTCGTCGATGTCGG+AGG 0.653946 7_4:+44784948 Msa1156520:CDS
GTTATCTGTGGGAATAGTGG+TGG 0.656068 7_4:-44784544 None:intergenic
TCAGGTAGTAGTGATACACT+TGG 0.656071 7_4:+44786906 Msa1156520:intron
GAAGGTGGAGAATGAAGTGG+TGG 0.658499 7_4:-44784495 None:intergenic
ACCAAGTCACAACCAACACG+TGG 0.660425 7_4:+44785403 Msa1156520:CDS
GGCGGCCTCAAATTTGACCG+AGG 0.665068 7_4:-44785953 None:intergenic
TGTTGCCGGTGGAAGTACGA+CGG 0.666120 7_4:-44784878 None:intergenic
TCGTCGGAAATAAAGAAAGA+CGG 0.669265 7_4:-44784844 None:intergenic
AAGTGAGAACCAGCTCTGAG+AGG 0.672321 7_4:+44786089 Msa1156520:CDS
AAAGCAAGTAGTGAAGGTGG+TGG 0.672403 7_4:-44784690 None:intergenic
GCATTGGATTAACCGGAACA+GGG 0.672778 7_4:-44787964 None:intergenic
TTCTGTAATCTCCTTCACAA+GGG 0.675756 7_4:-44787795 None:intergenic
GTTGAAGGTGGAGAATGAAG+TGG 0.677641 7_4:-44784498 None:intergenic
GGGAGTTTACAACGGTGCCG+AGG 0.681299 7_4:-44784992 None:intergenic
CTGATGTCAAAGGAGCAGAT+GGG 0.684126 7_4:+44787396 Msa1156520:CDS
AAGTGACAAATGAGTGTGTG+GGG 0.684846 7_4:+44786017 Msa1156520:CDS
GAAACTCCTCCTCCTCGCGG+CGG 0.688081 7_4:+44785026 Msa1156520:CDS
AGGAACTACAAACTTAGCAG+AGG 0.688364 7_4:+44787643 Msa1156520:CDS
GGTGGACGAGAAAGCTCCGG+TGG 0.689811 7_4:+44785200 Msa1156520:CDS
TAGCGGAGAGTGCTATAGGG+AGG 0.691895 7_4:-44784791 None:intergenic
AAAGGACAAGAACAAGAACA+AGG 0.697173 7_4:-44784319 None:intergenic
GAAGGAGGTGCTAACTCCGG+CGG 0.703813 7_4:-44785971 None:intergenic
GATTCCACGGGAGTTTACAA+CGG 0.709520 7_4:-44785000 None:intergenic
GCCGAGGTAGAGAAAATCGG+AGG 0.709735 7_4:-44784976 None:intergenic
AGCTGCAATTCAAACCAATG+GGG 0.712313 7_4:+44785785 Msa1156520:CDS
GCTTCTGTTAACGACAACGG+CGG 0.731811 7_4:-44785252 None:intergenic
TCGGAGTAGTTATCGCCACG+CGG 0.752385 7_4:-44785134 None:intergenic
AGTGACAAATGAGTGTGTGG+GGG 0.756743 7_4:+44786018 Msa1156520:CDS
TGGCGATAACTACTCCGACG+AGG 0.773819 7_4:+44785139 Msa1156520:CDS
GATGAAACTCCTCCTCCTCG+CGG 0.789296 7_4:+44785023 Msa1156520:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAGTAATCAACATAAAAAT+AGG - chr7_4:44786188-44786207 None:intergenic 15.0%
!! TTTATGGAGAAAAATGAAAA+TGG + chr7_4:44785545-44785564 Msa1156520:CDS 20.0%
!! TTGAACTAAGTAAATTGAAT+TGG + chr7_4:44786476-44786495 Msa1156520:intron 20.0%
!! TGAACTAAGTAAATTGAATT+GGG + chr7_4:44786477-44786496 Msa1156520:intron 20.0%
!! CCAATTTAAAAATATGAGAT+CGG - chr7_4:44787226-44787245 None:intergenic 20.0%
!! AATGAACAACTTTATTAGAA+TGG + chr7_4:44787724-44787743 Msa1156520:CDS 20.0%
!! AGTGTTGAAAAATGTTGAAA+AGG - chr7_4:44784130-44784149 None:intergenic 25.0%
!!! TTTGTTGTTGTTTTTTGCTA+GGG - chr7_4:44784292-44784311 None:intergenic 25.0%
!!! TTTTGTTGTTGTTTTTTGCT+AGG - chr7_4:44784293-44784312 None:intergenic 25.0%
!! TTGTTGTTGAGAAAGATAAA+AGG - chr7_4:44784384-44784403 None:intergenic 25.0%
!!! TTTGATTTTGGTTTTGGTTT+TGG - chr7_4:44784620-44784639 None:intergenic 25.0%
!!! TTTGGTTTTGATTTTGGTTT+TGG - chr7_4:44784626-44784645 None:intergenic 25.0%
! ATCATTAGAAGAGAGATTTA+TGG + chr7_4:44785529-44785548 Msa1156520:CDS 25.0%
!!! TTACTTTCTTTTAGCCTTTT+TGG + chr7_4:44786201-44786220 Msa1156520:intron 25.0%
!! TTATCTAAGATACACCAAAA+AGG - chr7_4:44786218-44786237 None:intergenic 25.0%
! TTGGTGTATCTTAGATAATT+TGG + chr7_4:44786220-44786239 Msa1156520:intron 25.0%
! TTCAGTTGTTTATCCAAAAA+GGG - chr7_4:44786349-44786368 None:intergenic 25.0%
! ATATTACTATATGCTGCAAT+TGG + chr7_4:44786448-44786467 Msa1156520:intron 25.0%
!! ATTTTCTGTAGTTGTTGTAT+TGG + chr7_4:44786746-44786765 Msa1156520:intron 25.0%
! ACAAGGATTACAATTTAACT+AGG - chr7_4:44786794-44786813 None:intergenic 25.0%
! AATTGTAATCCTTGTTCATA+AGG + chr7_4:44786799-44786818 Msa1156520:intron 25.0%
!!! TCTTGAAAGCTTGTTAAAAA+TGG + chr7_4:44786938-44786957 Msa1156520:CDS 25.0%
! AAAATCATTTCAAACTCTAG+AGG + chr7_4:44787133-44787152 Msa1156520:CDS 25.0%
!!! CCGATCTCATATTTTTAAAT+TGG + chr7_4:44787223-44787242 Msa1156520:intron 25.0%
!! AATTTTCAAAATTTCCTCCT+CGG - chr7_4:44787750-44787769 None:intergenic 25.0%
!! GAGATTACAGAATATTTTCA+TGG + chr7_4:44787806-44787825 Msa1156520:CDS 25.0%
!! AGAATATTTTCATGGAAACT+TGG + chr7_4:44787814-44787833 Msa1156520:CDS 25.0%
!!! AAACAGAAATCTTTTAGCTA+AGG - chr7_4:44788061-44788080 None:intergenic 25.0%
! TGTAGATTATGTAGAGTAAA+AGG + chr7_4:44788082-44788101 Msa1156520:three_prime_UTR 25.0%
! GTAGATTATGTAGAGTAAAA+GGG + chr7_4:44788083-44788102 Msa1156520:three_prime_UTR 25.0%
! TGAACTTTAATTGAAAGCAA+AGG - chr7_4:44788177-44788196 None:intergenic 25.0%
TAGTGGAAGAAGTAGATTAT+TGG - chr7_4:44784223-44784242 None:intergenic 30.0%
!!! GAGGTTTTAAGAGAGAAAAT+GGG - chr7_4:44784254-44784273 None:intergenic 30.0%
!!! AGAGGTTTTAAGAGAGAAAA+TGG - chr7_4:44784255-44784274 None:intergenic 30.0%
TAAGGAGATGGTAAACAAAA+AGG - chr7_4:44784340-44784359 None:intergenic 30.0%
!!! TTTGGTTTTGGTTTTGGTTT+GGG - chr7_4:44784614-44784633 None:intergenic 30.0%
!!! TTTTGGTTTTGGTTTTGGTT+TGG - chr7_4:44784615-44784634 None:intergenic 30.0%
!!! ATGGGTTTTGGTTTTGATTT+TGG - chr7_4:44784632-44784651 None:intergenic 30.0%
! TCTTGTTCTTCTTCTTCTTT+TGG + chr7_4:44785293-44785312 Msa1156520:CDS 30.0%
TCTTCATCAAAATCTCTTTC+TGG - chr7_4:44785473-44785492 None:intergenic 30.0%
TCAGTTGTTTATCCAAAAAG+GGG - chr7_4:44786348-44786367 None:intergenic 30.0%
GTTCAGTTGTTTATCCAAAA+AGG - chr7_4:44786350-44786369 None:intergenic 30.0%
ATGGAAATAGCTTATGAGTT+TGG - chr7_4:44786372-44786391 None:intergenic 30.0%
TAAACTACTAAGCTATCTAC+TGG - chr7_4:44786408-44786427 None:intergenic 30.0%
CTAAGTAAATTGAATTGGGT+TGG + chr7_4:44786481-44786500 Msa1156520:intron 30.0%
!!! GCAATATTTTGAGACTTCTT+TGG - chr7_4:44786631-44786650 None:intergenic 30.0%
AAATATTGCAATCTTGCTCA+AGG + chr7_4:44786642-44786661 Msa1156520:CDS 30.0%
! TATTTTCTCATTCCTGCATT+AGG + chr7_4:44786711-44786730 Msa1156520:intron 30.0%
CCAAGGTAAATATTTGAAGA+CGG - chr7_4:44786855-44786874 None:intergenic 30.0%
AACTAAATTTACCTTTCCTC+AGG + chr7_4:44786888-44786907 Msa1156520:intron 30.0%
! TGTTGCTGAGAAATTTTTGA+AGG + chr7_4:44787025-44787044 Msa1156520:CDS 30.0%
ATATACCTTTCGCGTTTAAA+AGG + chr7_4:44787057-44787076 Msa1156520:CDS 30.0%
TATACCTTTCGCGTTTAAAA+GGG + chr7_4:44787058-44787077 Msa1156520:CDS 30.0%
!! GTCAATTTTCAATCTGAAGT+AGG + chr7_4:44787101-44787120 Msa1156520:CDS 30.0%
!!! TTTTAAATTGGCGCTTTTTC+AGG + chr7_4:44787235-44787254 Msa1156520:intron 30.0%
TAGAAGCTGTACTTAAAACT+GGG + chr7_4:44787303-44787322 Msa1156520:CDS 30.0%
! GATTTGTTCCAATATTCATG+CGG - chr7_4:44787331-44787350 None:intergenic 30.0%
ATGAATATTGGAACAAATCG+CGG + chr7_4:44787332-44787351 Msa1156520:CDS 30.0%
TACAACAAAATGTAGTAGAG+TGG - chr7_4:44787426-44787445 None:intergenic 30.0%
!! TCTACTACATTTTGTTGTAC+AGG + chr7_4:44787427-44787446 Msa1156520:CDS 30.0%
TCAGATTAGAAACAACTTGT+AGG - chr7_4:44787544-44787563 None:intergenic 30.0%
ATGCAGTTAATCAAAAAGGT+AGG + chr7_4:44787668-44787687 Msa1156520:CDS 30.0%
! TGTAAATAGAGCTTTTCAAC+TGG + chr7_4:44788145-44788164 Msa1156520:three_prime_UTR 30.0%
!! GCTTTTAGTTGCATAAGAGA+AGG - chr7_4:44784196-44784215 None:intergenic 35.0%
!!! TGTTGTTTTTTGCTAGGGTT+TGG - chr7_4:44784287-44784306 None:intergenic 35.0%
AAAGGACAAGAACAAGAACA+AGG - chr7_4:44784322-44784341 None:intergenic 35.0%
TTGTTTACCATCTCCTTAGA+AGG + chr7_4:44784342-44784361 Msa1156520:CDS 35.0%
ATGAGAATGAGATCCTTCTA+AGG - chr7_4:44784358-44784377 None:intergenic 35.0%
!!! TTTGGTTTTGGTCTTGAGTA+GGG - chr7_4:44784572-44784591 None:intergenic 35.0%
!!! TTTTGGTTTTGGTCTTGAGT+AGG - chr7_4:44784573-44784592 None:intergenic 35.0%
!!! TTGGGTTTTGGTTTTGGTTT+TGG - chr7_4:44784584-44784603 None:intergenic 35.0%
AGTTTGGGAAAAATGGTGAT+GGG - chr7_4:44784650-44784669 None:intergenic 35.0%
TAGTTTGGGAAAAATGGTGA+TGG - chr7_4:44784651-44784670 None:intergenic 35.0%
TTGTTAGAAGAGTGAGAAGT+TGG - chr7_4:44784768-44784787 None:intergenic 35.0%
GAAATAAAGAAAGACGGAGA+TGG - chr7_4:44784841-44784860 None:intergenic 35.0%
TCGTCGGAAATAAAGAAAGA+CGG - chr7_4:44784847-44784866 None:intergenic 35.0%
TTATCGTAAACTTGAATCGC+CGG + chr7_4:44785058-44785077 Msa1156520:CDS 35.0%
!! TGATTTTTGTTGTGTTCTCC+GGG - chr7_4:44785372-44785391 None:intergenic 35.0%
!! GTGATTTTTGTTGTGTTCTC+CGG - chr7_4:44785373-44785392 None:intergenic 35.0%
TAATGATGCATGTGCATTTG+TGG - chr7_4:44785516-44785535 None:intergenic 35.0%
CTTTATCAGAACAACCATCA+AGG + chr7_4:44785570-44785589 Msa1156520:CDS 35.0%
! GAAACATTAGATAGCCTTGA+TGG - chr7_4:44785587-44785606 None:intergenic 35.0%
! ATCATCTTCATCGTTTTCTC+AGG - chr7_4:44785638-44785657 None:intergenic 35.0%
ACGATGAAGATGATGTATCA+AGG + chr7_4:44785644-44785663 Msa1156520:CDS 35.0%
TCAGAAACACTTGACATTCT+TGG - chr7_4:44785683-44785702 None:intergenic 35.0%
! AGAATGTCAAGTGTTTCTGA+CGG + chr7_4:44785683-44785702 Msa1156520:CDS 35.0%
TTAGCTGCAATTCAAACCAA+TGG + chr7_4:44785783-44785802 Msa1156520:CDS 35.0%
TAGCTGCAATTCAAACCAAT+GGG + chr7_4:44785784-44785803 Msa1156520:CDS 35.0%
ACTTGATTCTGCAACACAAA+AGG - chr7_4:44786001-44786020 None:intergenic 35.0%
TCTTGTATGCTTCATCATTG+TGG + chr7_4:44786283-44786302 Msa1156520:intron 35.0%
ATTATAAGTTGCGACTTGTG+AGG + chr7_4:44786311-44786330 Msa1156520:intron 35.0%
CAGTTGTTTATCCAAAAAGG+GGG - chr7_4:44786347-44786366 None:intergenic 35.0%
!! TACTGGCTTATTTGAGCTTA+TGG - chr7_4:44786391-44786410 None:intergenic 35.0%
GCTCTTAATGTCACAATAGA+AGG + chr7_4:44786664-44786683 Msa1156520:CDS 35.0%
TCATTCCTGCATTAGGTTTA+TGG + chr7_4:44786718-44786737 Msa1156520:intron 35.0%
CTGTAGTTGTTGTATTGGAT+TGG + chr7_4:44786751-44786770 Msa1156520:intron 35.0%
!! TGGATTGGTAGTTATTGAGT+AGG + chr7_4:44786766-44786785 Msa1156520:intron 35.0%
CCGTCTTCAAATATTTACCT+TGG + chr7_4:44786852-44786871 Msa1156520:intron 35.0%
GGAAGAAGAACGTAAATTGA+AGG + chr7_4:44786971-44786990 Msa1156520:CDS 35.0%
CTAGAAGCTGTACTTAAAAC+TGG + chr7_4:44787302-44787321 Msa1156520:CDS 35.0%
CAGGAGATTATTAGAACTGA+AGG + chr7_4:44787446-44787465 Msa1156520:CDS 35.0%
AACTACAAGCTCTACTTTGA+TGG + chr7_4:44787493-44787512 Msa1156520:CDS 35.0%
CAGCTCTCTTTACATTTGAT+AGG - chr7_4:44787574-44787593 None:intergenic 35.0%
GATGTCTTGAAACTTTCCAA+AGG + chr7_4:44787623-44787642 Msa1156520:CDS 35.0%
TGCTAAGTTTGTAGTTCCTT+TGG - chr7_4:44787642-44787661 None:intergenic 35.0%
GGTCATGCAGTTAATCAAAA+AGG + chr7_4:44787664-44787683 Msa1156520:CDS 35.0%
TTCTGTAATCTCCTTCACAA+GGG - chr7_4:44787798-44787817 None:intergenic 35.0%
ATTCTGTAATCTCCTTCACA+AGG - chr7_4:44787799-44787818 None:intergenic 35.0%
! TTTTCATGGAAACTTGGCAA+AGG + chr7_4:44787820-44787839 Msa1156520:CDS 35.0%
TCATCCATTCAGAATCTTCT+TGG + chr7_4:44787850-44787869 Msa1156520:CDS 35.0%
ACAACCAAGAAGATTCTGAA+TGG - chr7_4:44787857-44787876 None:intergenic 35.0%
!!! ATTTTTTAGCCGTTCTTGAC+AGG + chr7_4:44787882-44787901 Msa1156520:CDS 35.0%
!!! TTTTTTAGCCGTTCTTGACA+GGG + chr7_4:44787883-44787902 Msa1156520:CDS 35.0%
AGCTAATAAATTCCCTGTTC+CGG + chr7_4:44787952-44787971 Msa1156520:CDS 35.0%
AAGAGAGAAAATGGGAGAAG+TGG - chr7_4:44784246-44784265 None:intergenic 40.0%
! ATGAGATCCTTCTAAGGAGA+TGG - chr7_4:44784352-44784371 None:intergenic 40.0%
AGAGAGTTCAATGGCACAAA+GGG - chr7_4:44784426-44784445 None:intergenic 40.0%
!!! TGTTTGGGGTTTTTGGTTGA+AGG - chr7_4:44784516-44784535 None:intergenic 40.0%
!! AAATGGGTGTTTGGGGTTTT+TGG - chr7_4:44784523-44784542 None:intergenic 40.0%
! TGGGAATAGTGGTGGAAAAT+GGG - chr7_4:44784539-44784558 None:intergenic 40.0%
GTTGTTATCTGTGGGAATAG+TGG - chr7_4:44784550-44784569 None:intergenic 40.0%
TGAGTAGGGTTGTTATCTGT+GGG - chr7_4:44784558-44784577 None:intergenic 40.0%
TTGAGTAGGGTTGTTATCTG+TGG - chr7_4:44784559-44784578 None:intergenic 40.0%
!!! CTTGGTTTGGGTTTTGGTTT+TGG - chr7_4:44784590-44784609 None:intergenic 40.0%
!! TTTGGTTTGGGTCTTGGTTT+GGG - chr7_4:44784602-44784621 None:intergenic 40.0%
!!! TTTTGGTTTGGGTCTTGGTT+TGG - chr7_4:44784603-44784622 None:intergenic 40.0%
!!! TTTGGTTTTGGTTTGGGTCT+TGG - chr7_4:44784608-44784627 None:intergenic 40.0%
!!! GGAAAAATGGTGATGGGTTT+TGG - chr7_4:44784644-44784663 None:intergenic 40.0%
AGAGGGTAGTTTGGGAAAAA+TGG - chr7_4:44784657-44784676 None:intergenic 40.0%
GTGATGAAAGAGGGTAGTTT+GGG - chr7_4:44784665-44784684 None:intergenic 40.0%
GAAGCAAAAGCAAGTAGTGA+AGG - chr7_4:44784699-44784718 None:intergenic 40.0%
! AGAAGAGTGAGAAGTTGGTT+GGG - chr7_4:44784763-44784782 None:intergenic 40.0%
! TAGAAGAGTGAGAAGTTGGT+TGG - chr7_4:44784764-44784783 None:intergenic 40.0%
AAACTCTTCATCTTCCTCGT+CGG - chr7_4:44785156-44785175 None:intergenic 40.0%
GTTGCTTCTGTTAACGACAA+CGG - chr7_4:44785258-44785277 None:intergenic 40.0%
!! GATTTTTGTTGTGTTCTCCG+GGG - chr7_4:44785371-44785390 None:intergenic 40.0%
AAGAACGATATTCCACGTGT+TGG - chr7_4:44785418-44785437 None:intergenic 40.0%
! ATCGTTTTCTCAGGTGAAGA+AGG - chr7_4:44785629-44785648 None:intergenic 40.0%
AAAGCTACCTGGTATGTCAT+CGG + chr7_4:44785709-44785728 Msa1156520:CDS 40.0%
AGCTGCAATTCAAACCAATG+GGG + chr7_4:44785785-44785804 Msa1156520:CDS 40.0%
GTGAAGAAAATGTTCCCCAT+TGG - chr7_4:44785802-44785821 None:intergenic 40.0%
! TTTCTTCACAGAGGAAGCAT+TGG + chr7_4:44785813-44785832 Msa1156520:CDS 40.0%
!! TTCTTCACAGAGGAAGCATT+GGG + chr7_4:44785814-44785833 Msa1156520:CDS 40.0%
GCAATCTGCTTCGATATAAC+CGG - chr7_4:44785845-44785864 None:intergenic 40.0%
!! TTGGGAAGTGTCTAGAAGTT+CGG + chr7_4:44785916-44785935 Msa1156520:CDS 40.0%
ATCAACCTCGGTCAAATTTG+AGG + chr7_4:44785948-44785967 Msa1156520:CDS 40.0%
TCAAGTGACAAATGAGTGTG+TGG + chr7_4:44786015-44786034 Msa1156520:CDS 40.0%
CAAGTGACAAATGAGTGTGT+GGG + chr7_4:44786016-44786035 Msa1156520:CDS 40.0%
AAGTGACAAATGAGTGTGTG+GGG + chr7_4:44786017-44786036 Msa1156520:CDS 40.0%
AACAGCAAACCAAAAACCCA+CGG + chr7_4:44786549-44786568 Msa1156520:CDS 40.0%
!! GTGTGTGAAGCACTTTTAGA+AGG + chr7_4:44786688-44786707 Msa1156520:CDS 40.0%
GAAAGCCATAAACCTAATGC+AGG - chr7_4:44786726-44786745 None:intergenic 40.0%
ATCAGCGTACCTTATGAACA+AGG - chr7_4:44786811-44786830 None:intergenic 40.0%
AGTTGCATTATCAGTCTCCA+AGG - chr7_4:44786872-44786891 None:intergenic 40.0%
TATCACTACTACCTGAGGAA+AGG - chr7_4:44786902-44786921 None:intergenic 40.0%
AAGTGTATCACTACTACCTG+AGG - chr7_4:44786907-44786926 None:intergenic 40.0%
TCAGGTAGTAGTGATACACT+TGG + chr7_4:44786906-44786925 Msa1156520:intron 40.0%
TTACGTTCTTCTTCCTTGCT+CGG - chr7_4:44786966-44786985 None:intergenic 40.0%
TTTCTCAGCAACATCAAGCT+TGG - chr7_4:44787018-44787037 None:intergenic 40.0%
ACTCGATACACTTCTCAAGT+TGG + chr7_4:44787373-44787392 Msa1156520:CDS 40.0%
TGATGGAAGATGTCAAGTGT+CGG + chr7_4:44787510-44787529 Msa1156520:CDS 40.0%
TGTAAAGAGAGCTGCTACTA+TGG + chr7_4:44787580-44787599 Msa1156520:CDS 40.0%
AGGAACTACAAACTTAGCAG+AGG + chr7_4:44787643-44787662 Msa1156520:CDS 40.0%
TAGGATCTGATGAAAGCAGT+CGG + chr7_4:44787687-44787706 Msa1156520:CDS 40.0%
CAACTTTATTAGAATGGCCG+AGG + chr7_4:44787730-44787749 Msa1156520:CDS 40.0%
!! TGTGGAAGCATTGGATTAAC+CGG - chr7_4:44787974-44787993 None:intergenic 40.0%
GAAAATGGGAGAAGTGGTAG+TGG - chr7_4:44784240-44784259 None:intergenic 45.0%
!! AGGGTTTGGTGAAGTGAAAG+AGG - chr7_4:44784273-44784292 None:intergenic 45.0%
ATGGCACAAAGGGTTCATGA+AGG - chr7_4:44784416-44784435 None:intergenic 45.0%
GAGAGAGTTCAATGGCACAA+AGG - chr7_4:44784427-44784446 None:intergenic 45.0%
ATTGTGGTGGTTCAGATGGA+GGG - chr7_4:44784449-44784468 None:intergenic 45.0%
GTTGAAGGTGGAGAATGAAG+TGG - chr7_4:44784501-44784520 None:intergenic 45.0%
!!! TTGGGGTTTTTGGTTGAAGG+TGG - chr7_4:44784513-44784532 None:intergenic 45.0%
TGGTGGAAAATGGGTGTTTG+GGG - chr7_4:44784530-44784549 None:intergenic 45.0%
! GTGGTGGAAAATGGGTGTTT+GGG - chr7_4:44784531-44784550 None:intergenic 45.0%
! AGTGGTGGAAAATGGGTGTT+TGG - chr7_4:44784532-44784551 None:intergenic 45.0%
! GTGGGAATAGTGGTGGAAAA+TGG - chr7_4:44784540-44784559 None:intergenic 45.0%
GTTATCTGTGGGAATAGTGG+TGG - chr7_4:44784547-44784566 None:intergenic 45.0%
!!! TTGGGTCTTGGTTTGGGTTT+TGG - chr7_4:44784596-44784615 None:intergenic 45.0%
GGTGATGAAAGAGGGTAGTT+TGG - chr7_4:44784666-44784685 None:intergenic 45.0%
AAAGCAAGTAGTGAAGGTGG+TGG - chr7_4:44784693-44784712 None:intergenic 45.0%
GCAAAAGCAAGTAGTGAAGG+TGG - chr7_4:44784696-44784715 None:intergenic 45.0%
ATTAGGGAGGAGATGTTAGC+AGG - chr7_4:44784726-44784745 None:intergenic 45.0%
! AAGAGTGAGAAGTTGGTTGG+GGG - chr7_4:44784761-44784780 None:intergenic 45.0%
! GAAGAGTGAGAAGTTGGTTG+GGG - chr7_4:44784762-44784781 None:intergenic 45.0%
!! GGATCTTAGAGTCTTGTTGC+CGG - chr7_4:44784895-44784914 None:intergenic 45.0%
! GAAAAGCTCAACGCTGCTTT+CGG - chr7_4:44784916-44784935 None:intergenic 45.0%
! ACCTCCGATTTTCTCTACCT+CGG + chr7_4:44784975-44784994 Msa1156520:CDS 45.0%
GATTCCACGGGAGTTTACAA+CGG - chr7_4:44785003-44785022 None:intergenic 45.0%
!! AGGAGTTTCATCGATTCCAC+GGG - chr7_4:44785015-44785034 None:intergenic 45.0%
!! GAGGAGTTTCATCGATTCCA+CGG - chr7_4:44785016-44785035 None:intergenic 45.0%
!!! TTCTTCTTCTTTTGGCTCGC+CGG + chr7_4:44785301-44785320 Msa1156520:CDS 45.0%
GGTTTCCGGTGATGAAAGTA+GGG - chr7_4:44785750-44785769 None:intergenic 45.0%
! GGGGAACATTTTCTTCACAG+AGG + chr7_4:44785804-44785823 Msa1156520:CDS 45.0%
CGGCGATTGTTTATCAACCT+CGG + chr7_4:44785936-44785955 Msa1156520:CDS 45.0%
AGTGACAAATGAGTGTGTGG+GGG + chr7_4:44786018-44786037 Msa1156520:CDS 45.0%
CAATGCAGCGGCTTCAATTT+CGG - chr7_4:44786064-44786083 None:intergenic 45.0%
GAAATTGAAGCCGCTGCATT+GGG + chr7_4:44786063-44786082 Msa1156520:CDS 45.0%
CTCACTTTATCCCAATGCAG+CGG - chr7_4:44786076-44786095 None:intergenic 45.0%
! GAACACTTAAGCCCCCTTTT+TGG + chr7_4:44786333-44786352 Msa1156520:intron 45.0%
! GGTTGGTTGCAGATTGAATG+AGG + chr7_4:44786498-44786517 Msa1156520:intron 45.0%
! GTTAAAAATGGCACCGAGCA+AGG + chr7_4:44786950-44786969 Msa1156520:CDS 45.0%
TCAGCAACATCAAGCTTGGT+CGG - chr7_4:44787014-44787033 None:intergenic 45.0%
! TCGACCCTTTTAAACGCGAA+AGG - chr7_4:44787065-44787084 None:intergenic 45.0%
GGTCGAAGCAATGCTTTACA+TGG + chr7_4:44787079-44787098 Msa1156520:CDS 45.0%
ACTGGGAACCGCATGAATAT+TGG + chr7_4:44787320-44787339 Msa1156520:CDS 45.0%
!! CTCAAGTTGGCTGATGTCAA+AGG + chr7_4:44787386-44787405 Msa1156520:CDS 45.0%
CTGATGTCAAAGGAGCAGAT+GGG + chr7_4:44787396-44787415 Msa1156520:CDS 45.0%
GACATCACTGCTGAGAACTT+CGG - chr7_4:44787609-44787628 None:intergenic 45.0%
CTTTATTAGAATGGCCGAGG+AGG + chr7_4:44787733-44787752 Msa1156520:CDS 45.0%
!! TGTTGCTTTGACCCTTGTGA+AGG + chr7_4:44787784-44787803 Msa1156520:CDS 45.0%
TTTGCAGACCCTGTCAAGAA+CGG - chr7_4:44787894-44787913 None:intergenic 45.0%
!! GGTCTGCAAAGAAGTTGGTA+TGG + chr7_4:44787904-44787923 Msa1156520:CDS 45.0%
GCATTGGATTAACCGGAACA+GGG - chr7_4:44787967-44787986 None:intergenic 45.0%
! AGCATTGGATTAACCGGAAC+AGG - chr7_4:44787968-44787987 None:intergenic 45.0%
TGTAATCCAGGAAGTGGTTG+TGG - chr7_4:44787992-44788011 None:intergenic 45.0%
CAACCACTTCCTGGATTACA+CGG + chr7_4:44787992-44788011 Msa1156520:CDS 45.0%
TCTTTCCTTCCGTGTAATCC+AGG - chr7_4:44788004-44788023 None:intergenic 45.0%
GATGGAGGGAGAGAGTTCAA+TGG - chr7_4:44784435-44784454 None:intergenic 50.0%
GATTGTGGTGGTTCAGATGG+AGG - chr7_4:44784450-44784469 None:intergenic 50.0%
GGTGATTGTGGTGGTTCAGA+TGG - chr7_4:44784453-44784472 None:intergenic 50.0%
! GAATGAAGTGGTGGTGTTGG+TGG - chr7_4:44784489-44784508 None:intergenic 50.0%
! GGAGAATGAAGTGGTGGTGT+TGG - chr7_4:44784492-44784511 None:intergenic 50.0%
GAAGGTGGAGAATGAAGTGG+TGG - chr7_4:44784498-44784517 None:intergenic 50.0%
! AAGTAGTGAAGGTGGTGGTG+GGG - chr7_4:44784688-44784707 None:intergenic 50.0%
! CAAGTAGTGAAGGTGGTGGT+GGG - chr7_4:44784689-44784708 None:intergenic 50.0%
GGTGTGAGGAAGAATTAGGG+AGG - chr7_4:44784739-44784758 None:intergenic 50.0%
! GGGGGTGTGAGGAAGAATTA+GGG - chr7_4:44784742-44784761 None:intergenic 50.0%
! AGAGTGAGAAGTTGGTTGGG+GGG - chr7_4:44784760-44784779 None:intergenic 50.0%
!! CAGTAGCGGAGAGTGCTATA+GGG - chr7_4:44784797-44784816 None:intergenic 50.0%
! TGGAAGTACGACGGTTATGG+AGG - chr7_4:44784872-44784891 None:intergenic 50.0%
CATAACCGTCGTACTTCCAC+CGG + chr7_4:44784873-44784892 Msa1156520:CDS 50.0%
!! TCTTAGAGTCTTGTTGCCGG+TGG - chr7_4:44784892-44784911 None:intergenic 50.0%
! GGTGCCGAGGTAGAGAAAAT+CGG - chr7_4:44784982-44785001 None:intergenic 50.0%
! GAAGAGTTTTACTCGCCGAG+AGG + chr7_4:44785167-44785186 Msa1156520:CDS 50.0%
GGAAGATGATTCCGTACCAC+CGG - chr7_4:44785219-44785238 None:intergenic 50.0%
GTGGTACGGAATCATCTTCC+CGG + chr7_4:44785219-44785238 Msa1156520:CDS 50.0%
GCTTCTGTTAACGACAACGG+CGG - chr7_4:44785255-44785274 None:intergenic 50.0%
CTCATCGAATGAGACTGCTC+CGG - chr7_4:44785323-44785342 None:intergenic 50.0%
TTGTTGTGTTCTCCGGGGAT+TGG - chr7_4:44785366-44785385 None:intergenic 50.0%
!! TTGTGACTTGGTGAGGCTTC+TGG - chr7_4:44785395-44785414 None:intergenic 50.0%
!! GTGTTGGTTGTGACTTGGTG+AGG - chr7_4:44785402-44785421 None:intergenic 50.0%
ACCAAGTCACAACCAACACG+TGG + chr7_4:44785403-44785422 Msa1156520:CDS 50.0%
!! TCCACGTGTTGGTTGTGACT+TGG - chr7_4:44785407-44785426 None:intergenic 50.0%
TCTGACGGTTCAAAGCTACC+TGG + chr7_4:44785698-44785717 Msa1156520:CDS 50.0%
!! AGAGGTACCGATGACATACC+AGG - chr7_4:44785719-44785738 None:intergenic 50.0%
ACCAGCCCTACTTTCATCAC+CGG + chr7_4:44785742-44785761 Msa1156520:CDS 50.0%
CGGTTTCCGGTGATGAAAGT+AGG - chr7_4:44785751-44785770 None:intergenic 50.0%
TCATCACCGGAAACCGAAAG+AGG + chr7_4:44785755-44785774 Msa1156520:CDS 50.0%
AACCCTCCTCTTTCGGTTTC+CGG - chr7_4:44785764-44785783 None:intergenic 50.0%
GCAGCTAAACCCTCCTCTTT+CGG - chr7_4:44785771-44785790 None:intergenic 50.0%
!! GAGGAAGCATTGGGAGATTC+CGG + chr7_4:44785823-44785842 Msa1156520:CDS 50.0%
AGCAGCGACAGAGGAAACAT+TGG + chr7_4:44785897-44785916 Msa1156520:CDS 50.0%
GCAGCGACAGAGGAAACATT+GGG + chr7_4:44785898-44785917 Msa1156520:CDS 50.0%
AACACAAAAGGCCTCGAAGG+AGG - chr7_4:44785989-44786008 None:intergenic 50.0%
TGCAACACAAAAGGCCTCGA+AGG - chr7_4:44785992-44786011 None:intergenic 50.0%
CGAAATTGAAGCCGCTGCAT+TGG + chr7_4:44786062-44786081 Msa1156520:CDS 50.0%
!! AAGTGAGAACCAGCTCTGAG+AGG + chr7_4:44786089-44786108 Msa1156520:CDS 50.0%
!! AGTGAGAACCAGCTCTGAGA+GGG + chr7_4:44786090-44786109 Msa1156520:CDS 50.0%
!! AACCAGCTCTGAGAGGGAAA+TGG + chr7_4:44786096-44786115 Msa1156520:CDS 50.0%
! CTCTGAGAGGGAAATGGTGT+GGG + chr7_4:44786102-44786121 Msa1156520:CDS 50.0%
AACAAATCGCGGTGATGCAG+AGG + chr7_4:44787343-44787362 Msa1156520:CDS 50.0%
GCTGATGTCAAAGGAGCAGA+TGG + chr7_4:44787395-44787414 Msa1156520:CDS 50.0%
!! ACTGAAGGCATTCGTCTCTC+TGG + chr7_4:44787461-44787480 Msa1156520:CDS 50.0%
!! TGGAAGATGTCAAGTGTCGG+AGG + chr7_4:44787513-44787532 Msa1156520:CDS 50.0%
GACAGGGTCTGCAAAGAAGT+TGG + chr7_4:44787899-44787918 Msa1156520:CDS 50.0%
! GGAAGTGGTTGTGGAAGCAT+TGG - chr7_4:44787983-44788002 None:intergenic 50.0%
ATGCTTCCACAACCACTTCC+TGG + chr7_4:44787983-44788002 Msa1156520:CDS 50.0%
CTTCCGTGTAATCCAGGAAG+TGG - chr7_4:44787998-44788017 None:intergenic 50.0%
CACTTCCTGGATTACACGGA+AGG + chr7_4:44787996-44788015 Msa1156520:CDS 50.0%
GGTTGTGGAGGTGATTGTGG+TGG - chr7_4:44784462-44784481 None:intergenic 55.0%
GGTGGTTGTGGAGGTGATTG+TGG - chr7_4:44784465-44784484 None:intergenic 55.0%
!! TGAAGTGGTGGTGTTGGTGG+TGG - chr7_4:44784486-44784505 None:intergenic 55.0%
! GTGGTGGGGGTGATGAAAGA+GGG - chr7_4:44784674-44784693 None:intergenic 55.0%
!! AGTAGTGAAGGTGGTGGTGG+GGG - chr7_4:44784687-44784706 None:intergenic 55.0%
! GCAAGTAGTGAAGGTGGTGG+TGG - chr7_4:44784690-44784709 None:intergenic 55.0%
! GGGGGGTGTGAGGAAGAATT+AGG - chr7_4:44784743-44784762 None:intergenic 55.0%
!! TAGCGGAGAGTGCTATAGGG+AGG - chr7_4:44784794-44784813 None:intergenic 55.0%
!! GCAGTAGCGGAGAGTGCTAT+AGG - chr7_4:44784798-44784817 None:intergenic 55.0%
! CGGTGGAAGTACGACGGTTA+TGG - chr7_4:44784875-44784894 None:intergenic 55.0%
! TGTTGCCGGTGGAAGTACGA+CGG - chr7_4:44784881-44784900 None:intergenic 55.0%
TTTCCTCCGACATCGACGAC+GGG - chr7_4:44784954-44784973 None:intergenic 55.0%
GTTTCCTCCGACATCGACGA+CGG - chr7_4:44784955-44784974 None:intergenic 55.0%
GCCGAGGTAGAGAAAATCGG+AGG - chr7_4:44784979-44784998 None:intergenic 55.0%
GATGAAACTCCTCCTCCTCG+CGG + chr7_4:44785023-44785042 Msa1156520:CDS 55.0%
AACTTGAATCGCCGGAGCTC+CGG + chr7_4:44785066-44785085 Msa1156520:CDS 55.0%
TTCCCGAACCTCCATCACCT+CGG + chr7_4:44785111-44785130 Msa1156520:CDS 55.0%
TCGGAGTAGTTATCGCCACG+CGG - chr7_4:44785137-44785156 None:intergenic 55.0%
TGGCGATAACTACTCCGACG+AGG + chr7_4:44785139-44785158 Msa1156520:CDS 55.0%
CCACCAAGAGAAGAGCCTCT+CGG - chr7_4:44785185-44785204 None:intergenic 55.0%
! CTTGGTGGACGAGAAAGCTC+CGG + chr7_4:44785197-44785216 Msa1156520:CDS 55.0%
ACGAGAAAGCTCCGGTGGTA+CGG + chr7_4:44785205-44785224 Msa1156520:CDS 55.0%
TTCGATGAGTCTCTCACCGC+CGG + chr7_4:44785334-44785353 Msa1156520:CDS 55.0%
! GAAAGTAGGGCTGGTGACAG+AGG - chr7_4:44785737-44785756 None:intergenic 55.0%
TCCGGTGATGAAAGTAGGGC+TGG - chr7_4:44785746-44785765 None:intergenic 55.0%
TCACCGGAAACCGAAAGAGG+AGG + chr7_4:44785758-44785777 Msa1156520:CDS 55.0%
CACCGGAAACCGAAAGAGGA+GGG + chr7_4:44785759-44785778 Msa1156520:CDS 55.0%
TGTTTCCTCTGTCGCTGCTG+CGG - chr7_4:44785896-44785915 None:intergenic 55.0%
! TCGGTCAAATTTGAGGCCGC+CGG + chr7_4:44785955-44785974 Msa1156520:CDS 55.0%
!! CTCGAAGGAGGTGCTAACTC+CGG - chr7_4:44785977-44785996 None:intergenic 55.0%
CACCATTTCCCTCTCAGAGC+TGG - chr7_4:44786101-44786120 None:intergenic 55.0%
!! GCTCTGAGAGGGAAATGGTG+TGG + chr7_4:44786101-44786120 Msa1156520:CDS 55.0%
! GAGCAGCATCCGTGGGTTTT+TGG - chr7_4:44786561-44786580 None:intergenic 55.0%
AGTACTCTGCCCTCCTGACT+TGG - chr7_4:44786604-44786623 None:intergenic 55.0%
!! GATGTCAAGTGTCGGAGGCT+TGG + chr7_4:44787518-44787537 Msa1156520:CDS 55.0%
!! GTTGGTGGTGGTGGTTGTGG+AGG - chr7_4:44784474-44784493 None:intergenic 60.0%
!! GGTGTTGGTGGTGGTGGTTG+TGG - chr7_4:44784477-44784496 None:intergenic 60.0%
!! AGTGGTGGTGTTGGTGGTGG+TGG - chr7_4:44784483-44784502 None:intergenic 60.0%
!! GGTGGTGGGGGTGATGAAAG+AGG - chr7_4:44784675-44784694 None:intergenic 60.0%
! GAAGTTGGTTGGGGGGTGTG+AGG - chr7_4:44784753-44784772 None:intergenic 60.0%
GGAGATGGCAACAGCGACGA+CGG - chr7_4:44784826-44784845 None:intergenic 60.0%
!! GACGGTTATGGAGGCGTCGT+CGG - chr7_4:44784863-44784882 None:intergenic 60.0%
! TCCGACATCGACGACGGGTT+CGG - chr7_4:44784949-44784968 None:intergenic 60.0%
! GGGAGTTTACAACGGTGCCG+AGG - chr7_4:44784995-44785014 None:intergenic 60.0%
GGCACCGTTGTAAACTCCCG+TGG + chr7_4:44784996-44785015 Msa1156520:CDS 60.0%
TCGCCGAGAGGCTCTTCTCT+TGG + chr7_4:44785179-44785198 Msa1156520:CDS 60.0%
CCGAGAGGCTCTTCTCTTGG+TGG + chr7_4:44785182-44785201 Msa1156520:CDS 60.0%
GGCGGCCTCAAATTTGACCG+AGG - chr7_4:44785956-44785975 None:intergenic 60.0%
!! GAAGGAGGTGCTAACTCCGG+CGG - chr7_4:44785974-44785993 None:intergenic 60.0%
CGGAGTTAGCACCTCCTTCG+AGG + chr7_4:44785975-44785994 Msa1156520:CDS 60.0%
GATCGTGGAGCAGCATCCGT+GGG - chr7_4:44786568-44786587 None:intergenic 60.0%
CACGGATGCTGCTCCACGAT+CGG + chr7_4:44786567-44786586 Msa1156520:CDS 60.0%
GGTTCTTCCCCTGCCAAGTC+AGG + chr7_4:44786588-44786607 Msa1156520:CDS 60.0%
TCTTCCCCTGCCAAGTCAGG+AGG + chr7_4:44786591-44786610 Msa1156520:CDS 60.0%
CTTCCCCTGCCAAGTCAGGA+GGG + chr7_4:44786592-44786611 Msa1156520:CDS 60.0%
!! TCTGCCCTCCTGACTTGGCA+GGG - chr7_4:44786599-44786618 None:intergenic 60.0%
GACGACGGCGACTGCAGTAG+CGG - chr7_4:44784811-44784830 None:intergenic 65.0%
GCCGAACCCGTCGTCGATGT+CGG + chr7_4:44784945-44784964 Msa1156520:CDS 65.0%
GAACCCGTCGTCGATGTCGG+AGG + chr7_4:44784948-44784967 Msa1156520:CDS 65.0%
GAAACTCCTCCTCCTCGCGG+CGG + chr7_4:44785026-44785045 Msa1156520:CDS 65.0%
TAAACCGAACCACCGCCGCG+AGG - chr7_4:44785041-44785060 None:intergenic 65.0%
GCGCTAACGGTGGAAGAGGC+CGG - chr7_4:44785088-44785107 None:intergenic 65.0%
GGCCTCTTCCACCGTTAGCG+CGG + chr7_4:44785087-44785106 Msa1156520:CDS 65.0%
AGCCGCGCTAACGGTGGAAG+AGG - chr7_4:44785092-44785111 None:intergenic 65.0%
GGTTCGGGAAGCCGCGCTAA+CGG - chr7_4:44785101-44785120 None:intergenic 65.0%
!! GGCCGAGGTGATGGAGGTTC+GGG - chr7_4:44785116-44785135 None:intergenic 65.0%
!! CGGCCGAGGTGATGGAGGTT+CGG - chr7_4:44785117-44785136 None:intergenic 65.0%
TAGTTATCGCCACGCGGCCG+AGG - chr7_4:44785131-44785150 None:intergenic 65.0%
GGTGGACGAGAAAGCTCCGG+TGG + chr7_4:44785200-44785219 Msa1156520:CDS 65.0%
AACGGCGGAGAATGCTCGCC+GGG - chr7_4:44785240-44785259 None:intergenic 65.0%
CAACGGCGGAGAATGCTCGC+CGG - chr7_4:44785241-44785260 None:intergenic 65.0%
CTCCGGGGATTGGAACTCGC+CGG - chr7_4:44785356-44785375 None:intergenic 65.0%
CGATCGTGGAGCAGCATCCG+TGG - chr7_4:44786569-44786588 None:intergenic 65.0%
GGCAGGGGAAGAACCGATCG+TGG - chr7_4:44786583-44786602 None:intergenic 65.0%
!! CTGCCCTCCTGACTTGGCAG+GGG - chr7_4:44786598-44786617 None:intergenic 65.0%
!! CTCTGCCCTCCTGACTTGGC+AGG - chr7_4:44786600-44786619 None:intergenic 65.0%
TCCTCCTCGCGGCGGTGGTT+CGG + chr7_4:44785034-44785053 Msa1156520:CDS 70.0%
GGTGGAAGAGGCCGGAGCTC+CGG - chr7_4:44785080-44785099 None:intergenic 70.0%
TCGGGAAGCCGCGCTAACGG+TGG - chr7_4:44785098-44785117 None:intergenic 70.0%
CGGGGATTGGAACTCGCCGG+CGG - chr7_4:44785353-44785372 None:intergenic 70.0%
CGCCGGCGAGTTCCAATCCC+CGG + chr7_4:44785351-44785370 Msa1156520:CDS 70.0%
TGCTGCGGCAGAGGAGGAGG+CGG - chr7_4:44785881-44785900 None:intergenic 70.0%
TGTCGCTGCTGCGGCAGAGG+AGG - chr7_4:44785887-44785906 None:intergenic 70.0%
CTCTGTCGCTGCTGCGGCAG+AGG - chr7_4:44785890-44785909 None:intergenic 70.0%
CTCTGCCGCAGCAGCGACAG+AGG + chr7_4:44785888-44785907 Msa1156520:CDS 70.0%
ACTCCTCCTCCTCGCGGCGG+TGG + chr7_4:44785029-44785048 Msa1156520:CDS 75.0%
GAACCACCGCCGCGAGGAGG+AGG - chr7_4:44785035-44785054 None:intergenic 75.0%
ACCGAACCACCGCCGCGAGG+AGG - chr7_4:44785038-44785057 None:intergenic 75.0%
! CCACGCGGCCGAGGTGATGG+AGG - chr7_4:44785122-44785141 None:intergenic 75.0%
CCTCCATCACCTCGGCCGCG+TGG + chr7_4:44785119-44785138 Msa1156520:CDS 75.0%
TCGCCACGCGGCCGAGGTGA+TGG - chr7_4:44785125-44785144 None:intergenic 75.0%
AGAGGAGGAGGCGGCGGTGG+TGG - chr7_4:44785872-44785891 None:intergenic 75.0%
TGCGGCAGAGGAGGAGGCGG+CGG - chr7_4:44785878-44785897 None:intergenic 75.0%
CGCTGCTGCGGCAGAGGAGG+AGG - chr7_4:44785884-44785903 None:intergenic 75.0%
! GGCAGAGGAGGAGGCGGCGG+TGG - chr7_4:44785875-44785894 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 44784112 44788274 44784112 ID=Msa1156520;Name=Msa1156520
chr7_4 mRNA 44784112 44788274 44784112 ID=Msa1156520-mRNA-1;Parent=Msa1156520;Name=Msa1156520-mRNA-1;_AED=0.04;_eAED=0.04;_QI=200|1|1|1|0.75|0.6|5|211|1017
chr7_4 exon 44784112 44784604 44784112 ID=Msa1156520-mRNA-1:exon:11553;Parent=Msa1156520-mRNA-1
chr7_4 exon 44784641 44786149 44784641 ID=Msa1156520-mRNA-1:exon:11554;Parent=Msa1156520-mRNA-1
chr7_4 exon 44786510 44786709 44786510 ID=Msa1156520-mRNA-1:exon:11555;Parent=Msa1156520-mRNA-1
chr7_4 exon 44786910 44787154 44786910 ID=Msa1156520-mRNA-1:exon:11556;Parent=Msa1156520-mRNA-1
chr7_4 exon 44787257 44788274 44787257 ID=Msa1156520-mRNA-1:exon:11557;Parent=Msa1156520-mRNA-1
chr7_4 five_prime_UTR 44784112 44784311 44784112 ID=Msa1156520-mRNA-1:five_prime_utr;Parent=Msa1156520-mRNA-1
chr7_4 CDS 44784312 44784604 44784312 ID=Msa1156520-mRNA-1:cds;Parent=Msa1156520-mRNA-1
chr7_4 CDS 44784641 44786149 44784641 ID=Msa1156520-mRNA-1:cds;Parent=Msa1156520-mRNA-1
chr7_4 CDS 44786510 44786709 44786510 ID=Msa1156520-mRNA-1:cds;Parent=Msa1156520-mRNA-1
chr7_4 CDS 44786910 44787154 44786910 ID=Msa1156520-mRNA-1:cds;Parent=Msa1156520-mRNA-1
chr7_4 CDS 44787257 44788063 44787257 ID=Msa1156520-mRNA-1:cds;Parent=Msa1156520-mRNA-1
chr7_4 three_prime_UTR 44788064 44788274 44788064 ID=Msa1156520-mRNA-1:three_prime_utr;Parent=Msa1156520-mRNA-1
Gene Sequence

>Msa1156520

ATGCAAACCTTGTTCTTGTTCTTGTCCTTTTTGTTTACCATCTCCTTAGAAGGATCTCATTCTCATAAACCTTTTATCTTTCTCAACAACAATAGAAGAATCCTTCATGAACCCTTTGTGCCATTGAACTCTCTCCCTCCATCTGAACCACCACAATCACCTCCACAACCACCACCACCAACACCACCACTTCATTCTCCACCTTCAACCAAAAACCCCAAACACCCATTTTCCACCACTATTCCCACAGATAACAACCCTACTCAAGACCAAAACCAAAACCAAAACCCAAACCAAAACCCATCACCATTTTTCCCAAACTACCCTCTTTCATCACCCCCACCACCACCTTCACTACTTGCTTTTGCTTCATTTCCTGCTAACATCTCCTCCCTAATTCTTCCTCACACCCCCCAACCAACTTCTCACTCTTCTAACAAACTCCTCCCTATAGCACTCTCCGCTACTGCAGTCGCCGTCGTCGCTGTTGCCATCTCCGTCTTTCTTTATTTCCGACGACGCCTCCATAACCGTCGTACTTCCACCGGCAACAAGACTCTAAGATCCGAAAGCAGCGTTGAGCTTTTCTCGCGCAATGCCGAACCCGTCGTCGATGTCGGAGGAAACACCTCCGATTTTCTCTACCTCGGCACCGTTGTAAACTCCCGTGGAATCGATGAAACTCCTCCTCCTCGCGGCGGTGGTTCGGTTTATCGTAAACTTGAATCGCCGGAGCTCCGGCCTCTTCCACCGTTAGCGCGGCTTCCCGAACCTCCATCACCTCGGCCGCGTGGCGATAACTACTCCGACGAGGAAGATGAAGAGTTTTACTCGCCGAGAGGCTCTTCTCTTGGTGGACGAGAAAGCTCCGGTGGTACGGAATCATCTTCCCGGCGAGCATTCTCCGCCGTTGTCGTTAACAGAAGCAACAAATCAAGCTCAATTTCTTGTTCTTCTTCTTCTTTTGGCTCGCCGGAGCAGTCTCATTCGATGAGTCTCTCACCGCCGGCGAGTTCCAATCCCCGGAGAACACAACAAAAATCACCAGAAGCCTCACCAAGTCACAACCAACACGTGGAATATCGTTCTTCTTCTTCGTCGTTCTCTTCATCACGTTCAACACCAGAAAGAGATTTTGATGAAGAGAAAGAAAATGCTTCTTTATCCACAAATGCACATGCATCATTAGAAGAGAGATTTATGGAGAAAAATGAAAATGGTTCTTTATCAGAACAACCATCAAGGCTATCTAATGTTTCATCTTCAGCATTTTCTCTTCCTTCTTCACCTGAGAAAACGATGAAGATGATGTATCAAGGTTTTGATCAGTCTCCAAGAATGTCAAGTGTTTCTGACGGTTCAAAGCTACCTGGTATGTCATCGGTACCTCTGTCACCAGCCCTACTTTCATCACCGGAAACCGAAAGAGGAGGGTTTAGCTGCAATTCAAACCAATGGGGAACATTTTCTTCACAGAGGAAGCATTGGGAGATTCCGGTTATATCGAAGCAGATTGCTTCTCCACCACCGCCGCCTCCTCCTCTGCCGCAGCAGCGACAGAGGAAACATTGGGAAGTGTCTAGAAGTTCGGCGATTGTTTATCAACCTCGGTCAAATTTGAGGCCGCCGGAGTTAGCACCTCCTTCGAGGCCTTTTGTGTTGCAGAATCAAGTGACAAATGAGTGTGTGGGGGAAACTGAAGAGAGTTCGAAACCGAAATTGAAGCCGCTGCATTGGGATAAAGTGAGAACCAGCTCTGAGAGGGAAATGGTGTGGGATCAGATGAATTCTATGTCTTTTAAATTGAATGAGGAAATGATTGAGACATTGTTTGTAGTGAAAACAGCAAACCAAAAACCCACGGATGCTGCTCCACGATCGGTTCTTCCCCTGCCAAGTCAGGAGGGCAGAGTACTTGATCCAAAGAAGTCTCAAAATATTGCAATCTTGCTCAAGGCTCTTAATGTCACAATAGAAGGAGTGTGTGAAGCACTTTTAGAAGGTAGTAGTGATACACTTGGAGCAGAGCTTCTTGAAAGCTTGTTAAAAATGGCACCGAGCAAGGAAGAAGAACGTAAATTGAAGGAACATAAAGATGACTCACCGACCAAGCTTGATGTTGCTGAGAAATTTTTGAAGGCATTGCTTGATATACCTTTCGCGTTTAAAAGGGTCGAAGCAATGCTTTACATGGTCAATTTTCAATCTGAAGTAGGCTATCTTAGAAAATCATTTCAAACTCTAGAGGCTGCATGTGAAGAGCTGCGAAATTGTAGAATGTTCTTGAAGCTTCTAGAAGCTGTACTTAAAACTGGGAACCGCATGAATATTGGAACAAATCGCGGTGATGCAGAGGCTTTCAAACTCGATACACTTCTCAAGTTGGCTGATGTCAAAGGAGCAGATGGGAAAACCACTCTACTACATTTTGTTGTACAGGAGATTATTAGAACTGAAGGCATTCGTCTCTCTGGTACTAATCAAACTACAAGCTCTACTTTGATGGAAGATGTCAAGTGTCGGAGGCTTGGCCTACAAGTTGTTTCTAATCTGAGTTCAGACCTATCAAATGTAAAGAGAGCTGCTACTATGGATTCCGAAGTTCTCAGCAGTGATGTCTTGAAACTTTCCAAAGGAACTACAAACTTAGCAGAGGTCATGCAGTTAATCAAAAAGGTAGGATCTGATGAAAGCAGTCGGAAATTTACAGAATCAATGAACAACTTTATTAGAATGGCCGAGGAGGAAATTTTGAAAATTCAAGCACACGAAAGTGTTGCTTTGACCCTTGTGAAGGAGATTACAGAATATTTTCATGGAAACTTGGCAAAGGAAGAAGCTCATCCATTCAGAATCTTCTTGGTTGTAAGAGATTTTTTAGCCGTTCTTGACAGGGTCTGCAAAGAAGTTGGTATGGTAAACGAGCGAACTACAGTTAGTTCAGCTAATAAATTCCCTGTTCCGGTTAATCCAATGCTTCCACAACCACTTCCTGGATTACACGGAAGGAAAGATTGTTGTAACTCTTCAGATGATGAATTTTCATCACCTTAG
Protein sequence

>Msa1156520

MQTLFLFLSFLFTISLEGSHSHKPFIFLNNNRRILHEPFVPLNSLPPSEPPQSPPQPPPPTPPLHSPPSTKNPKHPFSTTIPTDNNPTQDQNQNQNPNQNPSPFFPNYPLSSPPPPPSLLAFASFPANISSLILPHTPQPTSHSSNKLLPIALSATAVAVVAVAISVFLYFRRRLHNRRTSTGNKTLRSESSVELFSRNAEPVVDVGGNTSDFLYLGTVVNSRGIDETPPPRGGGSVYRKLESPELRPLPPLARLPEPPSPRPRGDNYSDEEDEEFYSPRGSSLGGRESSGGTESSSRRAFSAVVVNRSNKSSSISCSSSSFGSPEQSHSMSLSPPASSNPRRTQQKSPEASPSHNQHVEYRSSSSSFSSSRSTPERDFDEEKENASLSTNAHASLEERFMEKNENGSLSEQPSRLSNVSSSAFSLPSSPEKTMKMMYQGFDQSPRMSSVSDGSKLPGMSSVPLSPALLSSPETERGGFSCNSNQWGTFSSQRKHWEIPVISKQIASPPPPPPPLPQQRQRKHWEVSRSSAIVYQPRSNLRPPELAPPSRPFVLQNQVTNECVGETEESSKPKLKPLHWDKVRTSSEREMVWDQMNSMSFKLNEEMIETLFVVKTANQKPTDAAPRSVLPLPSQEGRVLDPKKSQNIAILLKALNVTIEGVCEALLEGSSDTLGAELLESLLKMAPSKEEERKLKEHKDDSPTKLDVAEKFLKALLDIPFAFKRVEAMLYMVNFQSEVGYLRKSFQTLEAACEELRNCRMFLKLLEAVLKTGNRMNIGTNRGDAEAFKLDTLLKLADVKGADGKTTLLHFVVQEIIRTEGIRLSGTNQTTSSTLMEDVKCRRLGLQVVSNLSSDLSNVKRAATMDSEVLSSDVLKLSKGTTNLAEVMQLIKKVGSDESSRKFTESMNNFIRMAEEEILKIQAHESVALTLVKEITEYFHGNLAKEEAHPFRIFLVVRDFLAVLDRVCKEVGMVNERTTVSSANKFPVPVNPMLPQPLPGLHGRKDCCNSSDDEFSSP*